gi|00000000|ref|AP010888.1|  Bifidobacterium longum subsp. longum JCM 1217 DNA, complete 2385164, gc%: 60.33%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

#### region 1 ####
996159..996170                     attL                                                                                 N/A                 TGAGCAAGAGCC
997157..998440                     PHAGE_Bacill_vB_BtS_BMBtp14_NC_048640: methyltransferase type 11; BLLJ_0796; phage(gi100001)     5.02e-37            BifidobacteriumlongumsubsplongumJCM1217MAKYTREQRQRAVELYVKYECCAADVIRELGYPSREALRMWHRDWLDEQGTGVSSQRGERYARYTEEQKRAAVDHYLTHGRRASRTMRQMGYPSKEVLASWIDELAPGERRIRRGPVPGELKRDAVLKVASGELSSREAAEAVGVDSSVVRNWKRQLLGDAKGLMVAKREPERGDSSQQDDPDALRGEIATLRADLERLRAEQRAMEIRLAIMKGAAELVGKEPGADPDNLTSREKTTLIKDISETLGVNAESLLKEVGIARSTYYYQLKAMRRPDKNANLLSLVREAFGSSRRRYGYKRIHLELKSAGIIVSAKRIMRLMTSHGMVPVLKSAKRYSSYKGEIGGAPANLVNRDFHATAPNRLWVTDITEFSIPAGKVYLSPVIDCHDGMPVAWTIGTSPNAALANGMLRDACATLKPGETPIIHSD
complement(998527..999582)         PHAGE_Lactob_Lv_1_NC_011801: integrase; BLLJ_0797; phage(gi219563220)                2.71e-07            BifidobacteriumlongumsubsplongumJCM1217MSKARKTAASSGEPDFWRVARDWLHHWLPKVRGSSPKTVEAYRIGLESYVRWLETTEGTQRSHIGFGHFDRARLGRWVEWMRTERGYSDRTIMLRMTTMRVFLDHAGLEHPALTALGNDAAGIRVKPPARKPVDHLGEEHTKALLTAWGTGDAKSRRNRMLLILMYDTAARIGELAALTIADVGMDKPARVTLTGKRGKSRVVPLGERTRTHLAAYLEEFHPGPSMRDGDGPLFHSTRNGAIQPLSVDRIDEILKTAAARARRGTCPSMPERVHCHLIRRTRAMDLYQQGVPLPLIMQLLGHESMSTTSAFYAFATLDMMRKAVDAANPGPDPSKETWLSEQRLRQLHTLK
complement(999579..1000544)        PHAGE_Gordon_GMA5_NC_030907: hypothetical protein; BLLJ_0798; phage(gi100017)        9.79e-05            BifidobacteriumlongumsubsplongumJCM1217MRPTEHGFVGPLAGELEEYIRFKASMGRHGATRVQVLRSFDRHCLEHGAVRLERGVVERWIAHRIDANPGGCRSWFSYIRDFGRWMRLAHDPDAYVLSDQWKAGSPRPTPYLLTDREAALFLRAAGTLESPSPWAWQSRAFFMLMACCGLRTREVRRLAVGHVDHKARSIDVVDSKAGRSRRLPVGDEVAAELLECDQRSRERFGDDRPAFFVTSTGNPVSPGMPGVVFRRVWTRAGLEWPQAGKRPRPYDFRHRFAFANIERWTRDGVDVMAMLPYLAAYMGHAGIDSTLYYVHASLDFMDGYADLVADAERVVPETEEP
complement(1000541..1001743)       PHAGE_Thermu_P7426_NC_009804: phage XerD-like integrase; BLLJ_0799; phage(gi157265417)     6.47e-09            BifidobacteriumlongumsubsplongumJCM1217MGETTVGHVAGEVVRALYGAGYMESTIGQYRKSIRALERYAGGPDAVYTRGLGAGFAASTFSERTGGFSRQRWFDYGRLARLCDSYLRSGSVDLGKWRRSRLAEPVVPGLAVVMERWEAYLAGSGLASATVGHYRRMAGLFLTWLESHGVVSLDGSDGSHVLGFLAGLRSRWSESSMRHAASDLRPLFRWLGRDDLADAIGLAGIRRTHAIAGTLPDDEHRRLLEACASRSVPSRDAAITLLSLTCGLRACDVIGLRIADVDWDSMSIGLVQRKTGNPLTVPMTGPLAARLASWLLDERPATDDDRVFVRYKAPHVALRGHSSVYEAISRVMRHAGLGRRGGSRLLRRNAATRMLEAATPLPTISAVLGHADPDSTRVYMATHRGGMLACVLPVPEGGSS
1001977..1002198                   PHAGE_Bacill_vB_BtS_BMBtp14_NC_048640: methyltransferase type 11; BLLJ_0800; phage(gi100001)     2.48e-07            BifidobacteriumlongumsubsplongumJCM1217MSAKGCSPDNAAAEGFFGRLKQEFFHKRSFRGVTIDEFTAMLDEYMVWYRDKRIKTEYGMSIMDKRIQLGLVA
complement(1002569..1002703)       hypothetical protein; BLLJ_0801                                                      N/A                 BifidobacteriumlongumsubsplongumJCM1217MIYGLGTVWRCDCCGEYHTLLIIDDYPRVIVLIDGVEVLTLNVG
1003256..1004077                   PHAGE_Serrat_BF_NC_041917: hypothetical protein; BLLJ_0802; phage(gi100349)          4.60e-40            BifidobacteriumlongumsubsplongumJCM1217MNGTFEQLRAAVYGQAVGDALGVPYEFMPRDTFRCEGMTGYGTHNQPIGTWSDDTSMMLATLDSLIANEWQVNTEDMRERYLAWLSNGEYAIDGRVFDCGRTVSIALQQRVGLSGERDNGNGSLMRIMPLAFADASADDVRAASAITHAHAISMDACSSMVDVLRDGLIKGIWPQELDDEPLRGMPRDEVGSSGFVKDTYEAALWCLANTDDYASCVLAAVNLGDDTDTTAAVAGYLAGIKYGFDAIPAQWLAVLRGREFIEDVLGRTESAWH
1011285..1011296                   attR                                                                                 N/A                 TGAGCAAGAGCC

#### region 2 ####
1352641..1353000                   PHAGE_Bacill_vB_BtS_BMBtp14_NC_048640: methyltransferase type 11; BLLJ_1159; phage(gi100001)     4.59e-20            BifidobacteriumlongumsubsplongumJCM1217MSHKSVLKVMRRMGLECRIRRPNPYRKYSSYRDETGARAENLLNRDFTADRPWVKLGTDVTEFRVADGKAYPAPVYDMGSKEIVAWDVSRHPDMAQQRRLLAMLEEKLPEDADPIPHSD
1353131..1354333                   PHAGE_Thermu_P7426_NC_009804: phage XerD-like integrase; BLLJ_1160; phage(gi157265417)     6.47e-09            BifidobacteriumlongumsubsplongumJCM1217MGETTVGHVAGEVVRALYGAGYMESTIGQYRKSIRALERYAGGPDAVYTRGLGAGFAASTFSERTGGFSRQRWFDYGRLARLCDSYLRSGSVDLGKWRRSRLAEPVVPGLAVVMERWEAYLAGSGLASATVGHYRRMAGLFLTWLESHGVVSLDGSDGSHVLGFLAGLRSRWSESSMRHAASDLRPLFRWLGRDDLADAIGLAGIRRTHAIAGTLPDDEHRRLLEACASRSVPSRDAAITLLSLTCGLRACDVIGLRIADVDWDSMSIGLVQRKTGNPLTVPMTGPLAARLASWLLDERPATDDDRVFVRYKAPHVALRGHSSVYEAISRVMRHAGLGRRGGSRLLRRNAATRMLEAATPLPTISAVLGHADPDSTRVYMATHRGGMLACVLPVPEGGSS
1354330..1355295                   PHAGE_Gordon_GMA5_NC_030907: hypothetical protein; BLLJ_1161; phage(gi100017)        9.79e-05            BifidobacteriumlongumsubsplongumJCM1217MRPTEHGFVGPLAGELEEYIRFKASMGRHGATRVQVLRSFDRHCLEHGAVRLERGVVERWIAHRIDANPGGCRSWFSYIRDFGRWMRLAHDPDAYVLSDQWKAGSPRPTPYLLTDREAALFLRAAGTLESPSPWAWQSRAFFMLMACCGLRTREVRRLAVGHVDHKARSIDVVDSKAGRSRRLPVGDEVAAELLECDQRSRERFGDDRPAFFVTSTGNPVSPGMPGVVFRRVWTRAGLEWPQAGKRPRPYDFRHRFAFANIERWTRDGVDVMAMLPYLAAYMGHAGIDSTLYYVHASLDFMDGYADLVADAERVVPETEEP
1355292..1356347                   PHAGE_Lactob_Lv_1_NC_011801: integrase; BLLJ_1162; phage(gi219563220)                2.71e-07            BifidobacteriumlongumsubsplongumJCM1217MSKARKTAASSGEPDFWRVARDWLHHWLPKVRGSSPKTVEAYRIGLESYVRWLETTEGTQRSHIGFGHFDRARLGRWVEWMRTERGYSDRTIMLRMTTMRVFLDHAGLEHPALTALGNDAAGIRVKPPARKPVDHLGEEHTKALLTAWGTGDAKSRRNRMLLILMYDTAARIGELAALTIADVGMDKPARVTLTGKRGKSRVVPLGERTRTHLAAYLEEFHPGPSMRDGDGPLFHSTRNGAIQPLSVDRIDEILKTAAARARRGTCPSMPERVHCHLIRRTRAMDLYQQGVPLPLIMQLLGHESMSTTSAFYAFATLDMMRKAVDAANPGPDPSKETWLSEQRLRQLHTLK
1356471..1356752                   PHAGE_Bacill_vB_BtS_BMBtp14_NC_048640: methyltransferase type 11; BLLJ_1163; phage(gi100001)     3.17e-19            BifidobacteriumlongumsubsplongumJCM1217MGWQYRHRWWRDRLAGLNIRQSMSRKGNCIDNAATEQVFGHLKDEFHAGREFASYEQFKNELDAYIIHWNTKRRQIRLEGHTPEEFRNMSPTA
complement(1356870..1359194)       PHAGE_Burkho_BcepSaruman_NC_049850: head assembly cochaperone with GroEL; BLLJ_1164; phage(gi100436)     9.66e-13            BifidobacteriumlongumsubsplongumJCM1217MAEIDGEQYAARKLGCEISADPLNPLDPIKKVCKSHHPDEDLSILDRAYRRAVIQHSAQRRKSGEPYIIHPLAVSQILADLGMGPIVVAAGLLHDTVEDTDYTLDQCRAEFGDTVAGLVDGVTKLSQLEVGDSAQAETIRKLVVAMSRDVRTLVVKLADRVHNARTWRYVKTTSAQKKARETLDVYAPLANRLGMNAIKTELEELSFKVLYPKIYNEIVVLVARRAGQRDVYLKQILAEINEDLDEQNIKAYVTGRPKDYFSIYQKMIVRGHDFANIYDLVGVRIIVDTIQDCYAALGAVHARWNPVPGRFKDYIAMPKLNMYQSLHTTVVGPGGKPVEIQIRTWDMHRRAEFGIAAHWKYKENGQAGRALSSPDKSDRKRDENNQELSEVDNLKWIQQLADWTSETPDSNEFLGSLKEDLGSSEVYVFTPKGKIVSLPAHATPVDFAYAVHTEVGHRTMGARVNGRLVPLDTTLDNGDTVEILTSKSDTAGPSRDWLSFVKSPKARNKIRQWFSKERRTEAIEEGRDELTRAMRKRNLPVNTLLTPEALVGVADDLNFPNADAVFAAIGDGQVSTQNVISHLVKDAGADEVDEEVEQEVLPLKPMERKASSSSTGVSVKGVGDVWIKLARCCMPVPGDNIIGFITRNQGVSVHRTDCQNMIDLKNKQPERVVEVEWTSTKGLFMVKIQVEALDRRNLLSDVTRVLSDHGVNIISGTIATGSDRVATSQFSFEMADPQHLNSLLAAVRKIDGVFDVYRITGAKESAEPRLRKMK
complement(1359328..1359804)       PHAGE_Strept_BillNye_NC_042105: hypothetical protein; BLLJ_1165; phage(gi100058)     1.36e-44            BifidobacteriumlongumsubsplongumJCM1217MAFDETYNEPESTEVLVKSLDPEHPAQLHYAHAGDAGADLITTVDVTLKPFERALVPTGVAIALPAGYVALVHPRSGLAAKQGVTVLNAPGTVDAGYRGEIKVPLINLDPKHTAVFHPGDRIAQLVIQRYVEARFIPAETLPGSDRAERGFGSTGVAS

#### region 3 ####
2157507..2158964                   PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposase; BLLJ_1797; phage(gi557307612)     1.21e-11            BifidobacteriumlongumsubsplongumJCM1217MPKIQSIRQRRRNGESVASIARGEKVSEPTVRKYLKADDLSARPPVRRRRGSVLDEWIPVIEGMLAEDRETWHKQRHTATRIHERLRDEYGVEASLSTVTRTVARLKREFMAEREMGFLDLSWHPGECQADFGQVDVRYRGVVTRMRHFVLDFPYSNISPCQLMPGENAECTCQALLNLFEWLGGVPRRIVYDNAAGVGRRRFDEIRLTRLFQAFQAHYGFEYSFCNPYSGHEKGAVEARVGAVRRRLFVPVPSVWSLDNFNLRLPDRCLELGDKDHYRKGESQAGLFEDDRKALLPLPAKPFDVVTWTRMKADKYGNVTVQGRHRYAAGPEHAGHEMIVGLRALEVEILDAEGKRVITHPRSYGDKPTDSGDPSSQLGLLCDRPAAWRNSRVRDAMPDPLREWIDAQDEATRRDSLRALLHADGESGWRAAVAGMLEILESTGGTDRAGVCLAAARHASGLGPVAYDDPVDLSEYDIAYTKEDE
2158961..2159722                   PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposition protein; BLLJ_1798; phage(gi557307613)     3.50e-38            BifidobacteriumlongumsubsplongumJCM1217MNQKNGRTDPGPLRERARSLFISQATIDETLEWATPRQLDAIDRMLATELANREASKRARLMRQARFPVPKSLDGYDFANVRLPDGYTKEQLTGLDFVAKAQDLVFYGKTGRGKTHLATALGMLAIEQGRSVRFRQTAELVLQLGKAKRDGALDNLLKDLARADLIILDEFGYVPFDIDGARLLYQIIAGSYERRSIIFTTNIEFSKWGTIFADDKLAAAIIDRIVHHGRLIEFTGPSRRVSQALMFGKTDNQ
complement(2160167..2160325)       PHAGE_Paenib_PBL1c_NC_048689: holin; BLLJ_1799; phage(gi100034)                      5.89e-09            BifidobacteriumlongumsubsplongumJCM1217MQGIRNSGSTKAVDNRTPEENELIELRKRDRQLEMEVDVSEQAAPVFARKQA
2160620..2160991                   PHAGE_Staphy_phiPV83_NC_002486: transposase; BLLJ_1800; phage(gi9635740)             9.86e-13            BifidobacteriumlongumsubsplongumJCM1217MARIVPDKTARESIGARFLMFSALPAGAGTGVTHDDGTESARHAELRERLGMATYFADPYSSYRRGGNENRNGAIHRHLPKRTRIDPSMTDEIQAIVDRSTTVPCACSATAPRPRHSPTNCYH
complement(2161060..2162031)       PHAGE_Entero_phi92_NC_023693: Phi92_gp066; BLLJ_1801; phage(gi726646999)             2.40e-128           BifidobacteriumlongumsubsplongumJCM1217MKGIILAGGSGTRLYPLTTVTSKQLLPVYDKPMIYYPLSVLMMAGIRDILIISTPKDLPNFERLLGDGSQYGVKFSYVVQPSPDGLAQAFLLGEEFIAGEPCALVLGDNIFYGNGLGATLRKAKAKAENGEGASVFGYYVDDPERYGVVEFDADKKAVSIEEKPKRPKSNYAVTGLYFYDERVVEFAKQVKPSARGELEITDLNKMYLEAGALNVRTLGRGYAWLDTGTMDSLYEAGEFVRTVQRAQGLPIAVAEEIAYENGWITREQLLEAAEKYGKSPYGKHLKDVSDDKIILKQKNARGASFENEREARSGASPVVSAKS
complement(2162188..2163642)       PHAGE_Escher_ESCO13_NC_047770: hypothetical protein; BLLJ_1802; phage(gi100085)      7.78e-27            BifidobacteriumlongumsubsplongumJCM1217MSFEFEKDLKVEETNIPGLLVFDLPVHGDNRGWFKENWQRAKMTALGLPDFGPVQNNISFNATKGVTRGIHAEPWDKYISIAAGEIFGAWVDLRPGESFGQVYTTRLDPSKAIYVPRGVGNSFQALQDGTVYTYLVNAHWSLEQKKTYTFVNLADPELGIEWPIPLEESERSEADLHHPMLRDAKPMEPKRTLVTGCNGQLGRAVRAYAEAHGLRGFEYTDIDEFDFSDPTAYDKYDWSLYGTIINAGAYTAVDRAETAEGRPVAWKANAQGPALLARVAKDHHITLVHVSSDYVFDGTADLHSEDEAFAPLGVYGQTKAAGDIAVANAPEHYILRSSWVIGEGRNFVKTMMMLSDRVANPDDQLEQVTVVDDQYGRLTFTKDMAEAIFHLLDSHAPYGTYNLTGSGAVRNWAQIASRVFELTNGNGEKVKPISTAEYFANAKAPVSPRPEHSALDLSKIKAAGYTPADWEETLEAYVNKELGK
complement(2163650..2164519)       hypothetical protein; BLLJ_1803                                                      N/A                 BifidobacteriumlongumsubsplongumJCM1217MNVKKQADNAVMASRFLADARFQVYLDYARRHVDTVDRERLVDLAVRLYRWNVEASAITIGYIGYIEIFVRNAIDYRLCEWVSGQQITGIPDWLEAGKSDPIGRIRALINSPERDYIAEARNTALRKQRHWRSDQTHPRHGDAITRDDVFSQLTLGTWDGMLSRSGKDPELAHVLMGAFPNIADAWASELRRMPKGRLPGNDGDPFEDRLRKELVDRLKSVRTIRNRIGHDENLLRVEFAKLRYDMFFILDALGPECPNWAFPDKGEALKTLNPARCIATWQNDSEDRK
complement(2164584..2165606)       PHAGE_Entero_phi92_NC_023693: Phi92_gp067; BLLJ_1804; phage(gi726647000)             8.60e-91            BifidobacteriumlongumsubsplongumJCM1217MADEVFTPHNIIVTGGCGFIGSNFVHYVYNNHPDVHVTVLDALTYAGNLENIRPILGDRVEFVHGNICDDELLDKIVPGHDAIVHYAAESHNDNSIANPEPFLKTNVEGTFRLLEAARKYDVRYHHVSTDEVYGDLALDDPAKFTEQTPYHPSSPYSSTKASSDLLVRAWHRTFGIRATISNCSNNYGPFQHVEKFIPRQITNILEGLRPKLYGNGLNVRDWIHTDDHSTGVWTILTKGRLGETYLIGANGERNNITVLRDILTVMGKSPDDFDWVKDRPGHDRRYAIDSTKLQTELGWKPTHTDFQKGLEQTIKWYTDNRAWWEPAKAATEAKYKQQGQ
complement(2165599..2165880)       hypothetical protein; BLLJ_1805                                                      N/A                 BifidobacteriumlongumsubsplongumJCM1217MDPLVEAFVADGGLVVADPQGDLTDPEPVTVPQLVDPDIFLCRQVGISFHDECNAFSSVMNLNTSNRRQALHFYLEPGVSVAVRPRRYDCPYG
complement(2166573..2168969)       PHAGE_Geobac_TP_84_NC_041918: hypothetical protein; BLLJ_1806; phage(gi100028)       3.12e-14            BifidobacteriumlongumsubsplongumJCM1217MVEKKRFDGADAKGATGMLRALRARATASGAVRGVTAAMASVAAMAMLGAVCVTPASALADVNADADASGVRSAASVTASAAASDGTSSDARSQARSATSATRPVANGVMVADETAADAMPDNPDAELPDKVSAEISDDATVVSEQYAATPEGELKDIKTGETVTDPKIVGTESKQPDPLAKTDGESFIPVSAADVKEKVAANGGDVNAVSSKTRATNASVKLAALQNNEYGAHWGTYNGTQAFFDARNNLFAQQAKGVIDVSVWQNTIDWQAVKNAGVEGAIIRLSYGWGNGFDAQAKRNISECKRLGIPFGVYVFSYAESAADGASEGADVVNLLRQAGVNPGDLSYPVFYDLENWTYTGHRSPTSPSVYDGIVNSWYGKLQAAGYNNLSVYSYTSYLNSALNSGNIHGKTRWVAQYGSTMQYTAFPTNDRGWQYTSGGSISGISGRVDMNAFGNKTPVTQYVEVEKDGKWYYVDTATGKKATGWQRLSSSGGKWVYYDLSDGHMLYGEQQIGGKWYYLNPGTGARATGWVYLKVGANKWVYYGSDGAMLYGEQNIAGKWYYLNPDSGARMTGWVVLPDDRNVYYAPYMLYGEQKINGAWYYLNPVTGARKQGWQRLNSNGGKTVYYGADGKMQYGEKTIDGKQYFLDSMTGARLSGWRRTKITNEPSGGKWVYYGANGAMVHGESQVRGHWYFFDDDSSSSNGQVVYGWKYLSSSGGKWVYYQQGLGVMLYGEQHIDGAWYYLDPVTGARKSGWQRLNSNGGKTVYYGADGKMLYGTQYINGRLYYFDSVTGAKR
