gi|573013567|ref|AP013064.1|  Serratia marcescens SM39 plasmid pSMC1 DNA, complete genome. [asmbl_id: NC_000000].41517, gc%: 61.46%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
11164..11178                       attL                                                                                 N/A                 CCCAGGCAGCACATT
complement(22130..23143)           PHAGE_Mycoba_Butters_NC_021061: integrase; SM39_pSMC1_33; phage(gi479336499)         4e-12               MKTATAPLPPLRSVKVLDQLRERIRYLHYSLRTEQAYVHWVRAFIRFHGVRHPATLGSSEVEAFLSWLANERKVSVSTHRQALAALLFFYGKVLCTDLPWLQEIGRPRPSRRLPVVLTPDEVVRILGFLEGEHRLFAQLLYGTGMRISEGLQLRVKDLDFDHGTIIVREGKGSKDRALMLPESLAPSLREQLSRARAWWLKDQAEGRSGVALPDALERKYPRAGHSWPWFWVFAQHTHSTDPRSGVVRRHHMYDQTFQRAFKRAVEQAGITKPATPHTLRHSFATALLRSGYDIRTVQDLLGHSDVSTTMIYTHVLKVGGAGVRSPLDALPPLTSER
23289..24080                       aminoglycoside adenyltransferase; SM39_pSMC1_34                                      N/A                 MRVAVTIEISNQLSEVLSVIERHLESTLLAVHLYGSAVDGGLKPYSDIDLLVTVAVKLDETTRRALLNDLMEASAFPGESETLRAIEVTLVVHDDIIPWRYPAKRELQFGEWQRNDILAGIFEPAMIDIDLAILLTKAREHSVALVGPAAEEFFDPVPEQDLFEALRETLKLWNSQPDWAGDERNVVLTLSRIWYSAITGKIAPKDVAADWAIKRLPAQYQPVLLEAKQAYLGQKEDHLASRADHLEEFIRFVKGEIIKSVGK
24244..24591                       PHAGE_Acinet_Acj61_NC_014661: putative quaternary ammonium compound-resistance protein qacE; SM39_pSMC1_35; phage(gi311992758)     9e-11               MKGWLFLVIAIVGEVIATSALKSSEGFTKLAPSAVVIIGYGIAFYFLSLVLKSIPVGVAYAVWSGLGVVIITAIAWLLHGQKLDAWGFVGMGLIIAAFLLARSPSWKSLRRPTPW
24585..25424                       PHAGE_Pandor_dulcis_NC_021858: 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase; SM39_pSMC1_36; phage(gi526118698)     6e-13               MVTVFGILNLTEDSFFDESRRLDPAGAVTAAIEMLRVGSDVVDVGPAASHPDARPVSPADEIRRIAPLLDALSDQMHRVSIDSFQPETQRYALKRGVGYLNDIQGFPDPALYPDIAEADCRLVVMHSAQRDGIATRTGHLRPEDALDEIVRFFEARVSALRRSGVAADRLILDPGMGFFLSPAPETSLHVLSNLQKLKSALGLPLLVSVSRKSFLGATVGLPVKDLGPASLAAELHAIGNGADYVRTHAPGDLRSAITFSETLAKFRSRDARDRGLDHA
25829..27370                       putative transposase; SM39_pSMC1_37                                                  N/A                 MSLARNATASQSPTQTNGYERHQPDQTLLYQLVEQHYPAFKASLEAQGQHLPRYIQQEFNDLLQCGRLEYGFMRVRCEDCHHERLVAFSCKRRGFCPSCGARRMAESAALLIDEVFPKEPIRQWVLSFPFQLRFLLARHPQLMGQVLSIVYRTLSTHLIKKAGYTKASAQTGSVTLIQRFGSALNLNVHYHMLFLDGVYAEDDYGKQRFHRVKAPTYDELNTLAHTLSHRIARCMEKRGILERDAENTWLTLEEGEDDTLTQLHGASVTYRIAVGPQQGRKVFTLQTLPGREDKADSSSRVANHAGFSLHAGVMAEAHQRDKLERLCRYISRPAVSEKRLALTANGQVRYELKTPYRNGTTHVIFEPLDFIAKLAALVPKPRVNLTRFHGVFAPNSKHRVQVTPAKRGKKPDKSEGLDTNWRDKSPAERHRAMTWMQRLKRVFNIDIEVCEHCGGHVKVIASIEDPKVIEQILKHLKQKTAKANAAKQRELPPERAPPLTPSLFDPSQSRLFD
27579..27603                       attL                                                                                 N/A                 AGGTGGTTTATACTTCCTATACCCA
complement(27849..28589)           metallo-beta-lactamase IMP-1; SM39_pSMC1_38                                          N/A                 MSKLSVFFIFLFCSIATAAESLPDLKIEKLDEGVYVHTSFEEVNGWGVVPKHGLVVLVNAEAYLIDTPFTAKDTEKLVTWFVERGYKIKGSISSHFHSDSTGGIEWLNSRSIPTYASELTNELLKKDGKVQATNSFSGVNYWLVKNKIEVFYPGPGHTPDNVVVWLPERKILFGGCFIKPYGLGNLGDANIEAWPKSAKLLKSKYGKAKLVVPSHSEVGDASLLKLTLEQAVKGLNESKKPSKPSN
28742..29461                       integrase; SM39_pSMC1_39                                                             N/A                 MKTATAPLPPLRSVKVLDQLRERIRYLHYSLRTEQAYVHWVRAFIRFHGVRHPATLGSSEVEAFLSWLANERKVSVSTHRQALAALLFFYGKVLCTDLPWLQEIGRPRPSRRLPVVLTPDEVVRILGFLEGEHRLFAQLLYGTGMRISEGLQLRVKDLDFDHGTIIVREGKGSKDRALMLPESLAPSLREQLSRARAWWLKDQAEGRSGVALPDALERKYPRAGHSWLKSANTAAVTSK
29458..29625                       N/A;  SM39_pSMC1_40                                                                  0                   VIASIEDPKVIEQILKHLKQKTAKANAAKQRELPPERAPPLTPSLFDPSQSRLFD
29953..29977                       attR                                                                                 N/A                 AGGTGGTTTATACTTCCTATACCCA
30055..30069                       attR                                                                                 N/A                 CCCAGGCAGCACATT
30097..31245                       PHAGE_Mycoba_Hawkeye_NC_024209: D-ala-D-ala carboxypeptidase; SM39_pSMC1_41; phage(gi643654748)     6e-09               MQQRQSILWGAVATLMWAGLAHAGEASPVDPLRPVVDASIQPLLKEHRIPGMAVAVLKDGKAHYFNYGVANRESGASVSEQTLFEIGSVSKTLTATLGAYAVVKGAMQLDDKASRHAPWLKGSVFDSITMGELATYSAGGLPLQFPEEVDSSEKMRAYYRQWAPVYSPGSHRQYSNPSIGLFGHLAASSLKQPFAQLMEQTLLPGLGMHHTYVNVPKQAMASYAYGYSKEDKPIRVNPGMLADEAYGIKTSSADLLAFVKANIGGVDDKALQQAISLTHKGHYSVGGMTQGLGWESYAYPVTEQTLLAGNSAKVILEANPTAAPRESGSQVLFNKTGSTNGFGAYVAFVPARGIGIVMLANRNYPIPARVKAAHAILAQLAG
complement(31311..31733)           putative holliday junction resolvase; SM39_pSMC1_42                                  N/A                 MSSRSIMGFDYGTKSIGVAIGQEITGSARPLRSLKANDGIPNWDEIEKLLKEWQPDLLVVGLPLNMDGTDQEITVRARKFGNRLHGRFGKPVEFKDERLTTTDARARLFERGGYKALDKGSVDGVSAQLIVEAWMEEQYD
complement(31898..32461)           hypothetical protein; SM39_pSMC1_43                                                  N/A                 MHSMQTLQNHFLLAMPSLTDAYFQRSLVYLCEHSSEGAMGLVVNIPVDMSLDTMLTKLKLSPPDTAEMKQPVLQGGPVHGDRGFVLHSFRPGFNSTLQVSDEMMVTTSKDILETLGTDQAPDHWLVALGYAGWSAGQLEQELADGAWLVIPPNPKLVFDTPIHLRWQQAAASIGVNPLHLSSQVGHS
32694..32846                       N/A;  SM39_pSMC1_44                                                                  0                   MKGWLFLVIAIVGEVIATSALKSSEGFTKLAPSAVVIIVMASHFIFFLWL
complement(32869..33600)           PHAGE_Human_herpesvirus_4_type_2_NC_009334: EBNA-1; SM39_pSMC1_45; phage(gi139424506)     6e-09               MADWVNKTDRGLQRPRSSPCAEAIHRLPRSQKAVLPAAPNCHNHPNYLCTISPMHSMQTLQNHFLLAMPSLTDAYFQRSLVYLCEHSSEGAMGLVVNIPVDMSLDTMLTKLKLSPPDTAEMKQPVLQGGPVHGDRGFVLHSFRPGFNSTLQVSDEMMVTTGALGGRARPGGLRAGGGYDKGWRRGGRGGKGGGGGDKCVEGGGARKGGGRGGRSGRRGTGSRCAQEATGRGGNEETRSAGQSA
33674..34021                       PHAGE_Acinet_Acj61_NC_014661: putative quaternary ammonium compound-resistance protein qacE; SM39_pSMC1_46; phage(gi311992758)     9e-11               MKGWLFLVIAIVGEVIATSALKSSEGFTKLAPSAVVIIGYGIAFYFLSLVLKSIPVGVAYAVWSGLGVVIITAIAWLLHGQKLDAWGFVGMGLIIAAFLLARSPSWKSLRRPTPW
34015..34854                       PHAGE_Pandor_dulcis_NC_021858: 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase; SM39_pSMC1_47; phage(gi526118698)     6e-13               MVTVFGILNLTEDSFFDESRRLDPAGAVTAAIEMLRVGSDVVDVGPAASHPDARPVSPADEIRRIAPLLDALSDQMHRVSIDSFQPETQRYALKRGVGYLNDIQGFPDPALYPDIAEADCRLVVMHSAQRDGIATRTGHLRPEDALDEIVRFFEARVSALRRSGVAADRLILDPGMGFFLSPAPETSLHVLSNLQKLKSALGLPLLVSVSRKSFLGATVGLPVKDLGPASLAAELHAIGNGADYVRTHAPGDLRSAITFSETLAKFRSRDARDRGLDHA
34982..35482                       PHAGE_Acanth_moumouvirus_NC_020104: Glucosamine 6-phosphate N-acetyltransferase; SM39_pSMC1_48; phage(gi441432442)     4e-05               MDSEEPPNVRVACSGDIDEVVRLMHDAAAWMSAKGTPAWDVARIDRTFAETFVLRSELLVASCSDGIVGCCTLSAEDPEFWPDALKGEAAYLHKLAVRRTHAGRGVSSALIEACRHAARTQGCAKLRLDCHPNLRGLYERLGFTHVDTFNPGWDPTFIAERLELEI
complement(35938..36363)           NTP-binding protein; SM39_pSMC1_49                                                   N/A                 MDEYPIIDLSHLLPAAQGLARLPADERIQRLRADRWIGYPRAVEALNRLEALYAWPNKQRMPNLLLVGPTNNGKSMIVEKFRRTHPASSDADQEHIPVLVVQMPSEPSVIRFYVALLAAMGAPLRPRPRLPEMEQLALAWV
complement(36366..38045)           PROPHAGE_Brucel_1330: transposase, putative; SM39_pSMC1_50; phage(gi23501616)        4e-33               MATDTPRIPEQGVATLPDEAWERARRRAEIISPLAQSETVGHEAADMAAQALGLSRRQVYVLIRRARQGSGLVTDLVPGQSGGGKGKGRLPEPVERVIHELLQKRFLTKQKRSLAAFHREVTQVCKAQKLRVPARNTVALRIASLDPRKVIRRREGQDAARDLQGVGGEPPAVTAPLEQVQIDHTVIDLIVVDDRDRQPIGRPYLTLAIDVFTRCVLGMVVTLEAPSAVSVGLCLVHVACDKRPWLEGLNVEMDWQMSGKPLLLYLDNAAEFKSEALRRGCEQHGIRLDYRPLGQPHYGGIVERIIGTAMQMIHDELPGTTFSNPDQRGDYDSENKAALTLRELERWLTLAVGTYHGSVHNGLLQPPAARWAEAVARVGVPAVVTRATSFLVDFLPILRRTLTRTGFVIDHIHYYADALKPWIARRERWPSFLIRRDPRDISRIWVLEPEGQHYLEIPYRTLSHPAVTLWEQRQALAKLRQQGREQVDESALFRMIGQMREIVTSAQKATRKARRDADRRQHLKTSARPDKPVPPDTDIADPQADNLPPAKPFDQIEEW
38245..39156                       PHAGE_Ralsto_NP_2014_NC_023586: resolvase; SM39_pSMC1_51; phage(gi589287120)         7e-07               MPKGASMSRTKPAAAPMVARVYLRVSTDAQDLERQEGIITAAKAAGYYVAGIYREKASGARADRPELLRMVADLQPGEVVIAEKIDRISRLPLPEAERLVASIRAKGARLAVPGVVDLSDLAAEAQGVAKIVLESVQDMLLKLALQMARDDYEDRRERQRQGIELAKRDGRYKGRRADPKLRAQVIALRSIGQSIAETAKLAGCSVAQVKRIWASRDMSRAEAARHGAFVEDALTEADAGAAADVEQGAAELPEPAFLDDEGPSADLPAFIDTANIRSLYGWEPGETVEEAIARHRAKEGKTS
39339..40010                       hypothetical protein; SM39_pSMC1_52                                                  N/A                 MSNNNQKTTIDAVRAALSAARMGTFEVAAGVQSDDDPAALLLYAWNAEVSGAFLAPLHVCEVVVRNAVSDALEALYGPRWPWSATFERSLPDPMQGYSPRRDLQSARRSAQTTGKVIPELKFVFWQKMFTGRYDTRIWDQNLRRVMPNLDPAKPVATLRHAIYGDLERVRLLRNRIAHHEPIFARALADDYQTIVALVTYRCAVTAAWLDSNQTATAIIAAKP
40124..40756                       PHAGE_Vibrio_vB_VpaM_MAR_NC_019722: partition protein; SM39_pSMC1_53; phage(gi428782764)     1e-11               MAAIVAFVSQKGGVGKSTLARALAREAAAGGLRVKVADLDTQQGTAVDWHRLRLSQGIEPVVSVEAFATAAQALEAAKGYDLLIIDGPARTSSATLDIARAADLIVQPSGASRDDLIPAVREFHALTKAGVPNDRLAFALNRIGTPAEEVAARVYLQQAGYTVLDGSLRDRPAYRQAQNTGHSITETRFAGLNERADTLIQSLIDRVTNG
