gi|661245796|ref|AP014565.1|  Salmonella enterica subsp. enterica serovar Typhimurium str. 5051841, gc%: 52.16%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
368699..368745                     attL                                                                                 N/A                 ATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCAT
complement(368759..369922)         PHAGE_Salmon_ST64T_NC_004348: integrase; STL3553_c03390; phage(gi24371538)           0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MSLFRRGETWYASFTLPNGKRFKQSLGTKDKRQATELHDKLKAEAWRVSKLGETPDMTFEGACVRWLEEKAHKKSLDDDKSRIGFWLQHFAGMQLKDITETKIYSAIQKMTNRRHEENWKLMDEACRKNGKQPPVFKPKPAAVATKATHLSFIKALLRAAEREWKMLDKAPIIKVPQPKNKRIRWLEPHEAKRLIDECPEPLKSVVEFALSTGLRRSNIINLEWQQIDMQRKVAWIHPEQSKSNQAIGVALNDTACRVLKKQIGNHHKWVFVYKASSTKPDRTKSPVVRKMRYDANTAWRAALKRAGIEDFRFHDLRHTWASWLVQAGVPISVLQEMGGWESIEMVRRYAHLAPNHLTEHARQIDSIFDTSVPNMSHGKNKEGTNNT
complement(370152..370289)         PHAGE_Salmon_SEN22_NC_028696: formate dehydrogenase N alpha subunit; STL3553_c03400; phage(gi966201338)     2.30e-23            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MVLVISATYLCRRGDIDGAVYAGIAIFGFIELLVEIALLASVLGK
complement(370360..370755)         PHAGE_Entero_UAB_Phi20_NC_031019: hypothetical protein; STL3553_c03410; phage(gi100055)     7.88e-31            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MTTITKERIELYVKSPLENGLTRGEQMDLARIALASLEAEPIGYMNRFTGRVFSLDEQPGADTDTDVYEPVYAAPPAPVVPDGYALVPVEPTDEMIAAAMNCEDVMFNSDESFCVQFGNIYEAMLAAAPQK
complement(370759..371157)         PHAGE_Pectob_ZF40_NC_019522: putative methylase; STL3553_c03420; phage(gi422936660)     7.61e-72            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MFADIRAEEHTLCDGRRLVISPDLIADFRALPFADSSFPVVVFDPPHLERVGQTAWMGKKYGHLNKKTWRADIRAGFKEAFRVLRPHGVLIFKWNETQIPVSQILALTDVKPIIGQRTGKNDKTHWIIFVKD
complement(371232..371489)         PHAGE_Salmon_BTP1_NC_042346: DCTP pyrophosphatase; STL3553_c03430; phage(gi100024)     7.07e-30            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MEQQANAEFIAAASPAAVLALLDEREAAKKRIAELEARTVNLPKRSVGEVMHLSGFSRDYAEGWCAGNDNAMHEIRAAGIKVKES
complement(371683..371982)         PHAGE_Escher_HK75_NC_016160: hypothetical protein; STL3553_c03440; phage(gi356870704)     2.15e-65            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MSVCLIDKRRRGQQIPSVEMPNHTWFCVLDIDGMDTLIDTRHYCDTATATPAKAKKMAALIENWTPPDGWCNGNDRDWHEKMKGYICDFLRKCNGFMVM
complement(371979..372377)         PHAGE_Entero_HK97_NC_002167: Gp37; STL3553_c03450; phage(gi9634184)                  7.29e-39            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MKQMTLIEMDGFLKGKCIPRDLKVNETNAEYLVRKFAEAEAKCAALAAENAGMKHAMAVTLEHVSVTDAGQAGVAAMIINDALHHSETPATDAFLAEVWAQGVEMFADNLLCPDLDDTIRDFAAQLRKGGNQ
complement(372374..372538)         PHAGE_Entero_Sf101_NC_027398: hypothetical protein; STL3553_c03460; phage(gi849122286)     6.76e-32            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MRGLAYNPGILPAEMIIRQRVKPMPSREELLKRNSFPSVNQNKYLNEMWRSGKK
complement(372549..372779)         PHAGE_Entero_ES18_NC_006949: gp46; STL3553_c03470; phage(gi62362259)                 3.66e-46            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MLDKFRKNYDLIMSMPQETKAERDFRNSIWLAERNEKELIRQTSIRPFRKAIYTKFIEIDPRLKNYRSRYGAISND
complement(372889..373173)         PHAGE_Salmon_BTP1_NC_042346: hypothetical protein; STL3553_c03480; phage(gi100028)     2.23e-63            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MRRLNITPAEMESVCGRMVACRAAEHLGLNINQFYYIAKKLSLKTAFVKPRWSEDEDKRMQALISSGYTQRNVAKILGRSEESVKSRLSRLRKK
complement(373173..373880)         PHAGE_Entero_UAB_Phi20_NC_031019: ribonucleotide reductase A subunit; STL3553_c03490; phage(gi100062)     5.50e-173           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MNLDQLDEPFAAEDIEWRIQQSGKTRDGKVWAMVLAYVTNRAIMKRLDDVCGKAGWRNEYRDIPNNGGVECGISIKIGSEWVTKWDAAENTQVEAVKGGRSGAMKRAAVQWGIGRYLYNLEEGFAQISSDKKQGWHRAKLKDGTGFYWLPPSLPDWAMPASCNQPSPENTNQKSPSVDCEQILKDFSDYAATETDKKKLIERYQHDWQLLAGHDDAQTKCVQVMNIRINELKQVA
complement(373877..374020)         PHAGE_Salmon_BTP1_NC_042346: hypothetical protein; STL3553_c03500; phage(gi100030)     3.69e-19            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MLHDFDDEEFIALISPKIEEEVEQQINLAAERQNPVISWDEFAGYYS
complement(374010..374198)         PHAGE_Salmon_BTP1_NC_042346: hypothetical protein; STL3553_c03510; phage(gi100031)     9.35e-39            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MTITPVNGTILVQQGNREFNKLYEKVFPDTKQGMSDAYTWAAGIALGWDKWQDEEWEARHVA
complement(374179..374337)         PHAGE_Salmon_vB_SemP_Emek_NC_018275: C3 protein; STL3553_c03520; phage(gi399498834)     2.92e-30            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MTFTIAGGAVMGIAHLNESLLERITRKLRAGLKRLGEILNQPGVPRHDHYAC
complement(374544..374669)         PHAGE_Salmon_g341c_NC_013059: Enterobacter protein of unknown function; STL3553_c03530; phage(gi255252718)     7.78e-21            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MEINKEQASEIIKLIEQALLDGFDDEILVSLHESLTKFVSE
374825..375259                     PHAGE_Lactob_LP65_NC_006565: tail fiber; STL3553_c03540; phage(gi56693145)           1.93e-13            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MVLAPCSYIFTVRYTYEVFLTQDYESEIRQVGTVQVGTAQVGTAQVGTAQVGTAQVGIAQVGIAQVGTAQVGIAQVGIAQVGTAQVGTVQVGTAQVGTAQVGIAQVGTAQVGTAQVGIAQVGTAQVGTAQVGTVQVGSRSALTH
375533..376084                     PHAGE_Entero_P22_NC_002371: SieB; STL3553_c03550; phage(gi9635513)                   1.56e-133           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MRFFLQGMTLKQLIHMLIILIVLIIVMPVSVKEWINLHNPEILPHYWMYYILLFCVSYVLNGVVNSVYHAVTERIEASTAQRRKDREEKVVRDLFDSLTLGERAYLAFAVAANNQLKTEKGSPEAISLLKKGIITRLPSAIGYPDIDRFIIPEKYFNECYMRFAGKSDILMNELIVQDEQLKK
complement(376761..377414)         PHAGE_Stx2_II_NC_004914: CI protein; STL3553_c03560; phage(gi32171122)               1.39e-156           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MKWYELARSRMKELGITQEKLAEELGMTQGGIGHWLRGSRHPSLDEIGVVFKYLGIDNVSFNHDGTFSPAGEYSSAPVKKQYEYPVFSHVQAGMFSPELRTFTKGDAERWVSTTKKASDCAFWLEVEGNSMTAPTGSKPSFPDGMLILVDPEQAVEPGDFCIARLGGDEFTFKKLIRDSGQVFLQPLNPQYPMIPCNDSCSVVGKVIASQWPEETFS
377857..378153                     PHAGE_Stx2_vB_EcoP_24B_NC_027984: CII; STL3553_c03570; phage(gi937456259)            2.13e-64            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MEQTSYSKLSQRDVDRAETDLLINLSTLTQRGLAKMIGCHESKISRTDWRFIASVLCAFGMASDISPISRAFKYALDGLTNKKRPAATERSDQIQMQF
378186..378830                     PHAGE_Sulfit_NYA_2014a_NC_027299: T5ord172-domain containing protein; STL3553_c03580; phage(gi848469691)     5.51e-12            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MTYENDKFQVLKSMKMPDDFKSNGFVYVLSNECMPGIYKIGMTKHSPEVRAKEISASTGVPKPFKVIAAFHSNNPASDEKLIHKAFAKERLSDNREFFKLEDNDLSESLNEIRALVGPERNGETAEYAIYDSFISFRHENELDLNEELIEQGLGSVVGHLPAVKNFLIRAGIDYAKQLISKYNSSIVINTDGSVVMVKSLEAQCFDAEVGNEPC
378802..379659                     PHAGE_Entero_mEpX1_NC_019709: DNA replication protein O; STL3553_c03590; phage(gi428781918)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MRRLEMSLAEVFYLPKSEPVEQERRVADIDDGYTRFANELLEAIASADLTARQLKVMLAYVRKTYGFNKKTDRIADEQIAQLTGLSRQNVNKAKKELISMNCLFMDGNQIGVNSEVSAWQFSKCLQVSNFVSKLETKNVSKLETLNVSKLETHKRHSLKTKENINKPPISPKKVSQKFDPLETELPDWLSAETWLSWVTYRKEIGKSIKSKQSVTQAINVLSRSLEKGYTPEEIINQSIASGWQGIFEPKTPKGKSQPRPQHRAMQENFATKDYGQTEMPSWAQE
379662..380507                     PHAGE_Entero_mEpX1_NC_019709: putative replication protein DnaC; STL3553_c03600; phage(gi428781919)     8.28e-146           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MTLDEKISQLEKKLAELSSPPIAIEHTAVEIGTGICEKHGEFEQRNRYSTGPIKFASRPSECPECMRDELIRLQAEKIKIDEESRKRNVEFLLNNLDIPERFKGCTLQNYEPVNDDAKRVLRVCQAYASKWPERLQKGGGLVMCGKPGTGKNHLALAIARHAITEHQSSAIFTTALKIAREYKSTWSKNSTRTEDEVIRQFTKPDLLIIDEVGVQFGSEAEKMIMFEIINTRYERMKPTILISNQSKDELSAFIGERVIDRMNDGGGCTLAFTWDSYRSRS
380853..381305                     PHAGE_Entero_UAB_Phi20_NC_031019: DNA topoisomerase II large subunit; STL3553_c03610; phage(gi100005)     1.23e-103           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MEREVMKKLTFEIRSPAHQQNAIHAVQQILPDPTKPIVVTIQERNRSLDQNRKLWACLGDVSRQVEWHGRWLDAESWKCVFTAALKQQDVVPNLAGNGFVVIGQSTSRMRVSEFAELLELIQAFGTERGVKWSDEARLALECKARFGDAA
381621..381953                     PHAGE_Entero_UAB_Phi20_NC_031019: hypothetical protein; STL3553_c03620; phage(gi100008)     1.45e-78            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MDYSQLSDFEINKRVAIATGHKKFNGLGWQGTQEDSCSAVIVRGPTKIGAFDPCNNPADAWPIIEKYRISFLDQLTEWCVDAKGVSPIFDIRPLRAAMIVFLLMQDANNA
381946..382122                     PHAGE_Entero_UAB_Phi20_NC_031019: hypothetical protein; STL3553_c03630; phage(gi100009)     5.27e-36            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MLSPSQSLQYQKESVERALTCANCGQKLHVLEVHVCEACCAELMSDPNSSMYEEEDDG
382115..382726                     PHAGE_Entero_UAB_Phi20_NC_031019: hypothetical protein; STL3553_c03640; phage(gi100010)     5.53e-148           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MAKSARRRCKNEECREWFHPAFANQWWCSPECGTKIALERRSKEREKAEKAAEKKRRREEQKQKDKLKIRKLALKPRSYWIKQAQQAVNAFIRERDRDLPCISCGTLTSAQWDAGHYRTTAAAPQLRFDERNIHKQCVVCNQHKSGNLVPYRVMLIERIGIAAVDEIESDHKRHRWTTEECKAIKAEYQQKLKDLRDSRSEAA
382723..382947                     PHAGE_Entero_UAB_Phi20_NC_031019: hypothetical protein; STL3553_c03660; phage(gi100011)     6.28e-51            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MSKIQYPMTTAAIFDDVVYPLHFDNAGKVRQEMEGAVNWFCRWCNEEKAAVKARLLVSCWGQYLSHEQVIREAA
383128..383307                     PHAGE_Salmon_118970_sal4_NC_030919: DNA polymerase; STL3553_c03670; phage(gi100036)     2.07e-35            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MTVTSINQAKQQRERDEAELRSVREMTEQHQKAMDYLHERERELVNRVGLNKPAGGDAA
383304..383792                     PHAGE_Salmon_BTP1_NC_042346: hypothetical protein; STL3553_c03650; phage(gi100055)     6.55e-102           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MSIRELNLTKEQHDWLNGWLELWGAWVYSGRLEKRMSSVIAQFMERVEPSRVMTRPMCNDDDGMLISQVVDSVMRIDTKAFGILLSYYAHGSSKYAISSYYHKTASPRKMSGRGGERMRKPSLITCRREVDDVLKASLFMLYQPMLNAFNSRKRVDKIKHVA
384063..384581                     PHAGE_Bacill_Mater_NC_027366: dihydrofolate reductase; STL3553_c03680; phage(gi100060)     5.88e-28            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MLSENAKDIAGYEGKYAITTDGRVYSHSRVDTRGKLRKGRWLKPREHGGGYLQVSLCDKGKVKQLYIHRLVAITFIDNPRSHPQVNHINGIKTDNNTSNLEWVTPSQNMLHAHESGLQVAIKGEGHYRAKLTTEQVSEIRSRKSMSRSDMARKYGVDPSQISNIINNKRWVI
384806..385132                     PHAGE_Entero_UAB_Phi20_NC_031019: hypothetical protein; STL3553_c03690; phage(gi100017)     3.04e-73            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MKKMPEKHDLLTAMMAAKEQGIGAILAFAMAYLRGRYNGGAFKKTLIDATMCAIIAWFIRDLLVFAGLSSNLAYIASVFIGYIGTDSIGSLIKRFAAKKAGVDDANQQ
385113..385553                     PHAGE_Entero_UAB_Phi20_NC_031019: exonuclease A; STL3553_c03700; phage(gi100018)     1.94e-100           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MMQISSNGITRLKREEGERLKAYPDSRGIPTIGVGHTGKVDGNPVVSGMTITAEKSSELLKEDLQWVEDAINSLVRVPLNQNQYDALCSLIFNIGKSAFASSTVLRQLNLKNYQAAADAFLLWKKAGKDPDILLPRRRRERALFLS
385550..386020                     PHAGE_Salmon_118970_sal4_NC_030919: clamp-loader subunit; STL3553_c03710; phage(gi100040)     2.32e-86            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MMFNWKTMFVGLLLVSLIVSGRLANHYRDNAISYKEQRDNKASELEKANATITDMQQRQLDADALDAKYTKELADEKAENDALRRKLDNGGRVLVKGKCPVPSSAETSSASGMGNDATVELSPVAGRNVLGIRDGIISDQTALRTLQEYIRTQCLK
386233..386754                     PHAGE_Salmon_SPN3UB_NC_019545: KilA-N domain protein; STL3553_c03720; phage(gi423262448)     1.33e-127           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MNIVPLNYKGEPIRFNTDGWINATDIAKRFGKRLDHWLSNTETLEYVRALDEVYSGEPSKILHTRDSGYVKTSKARKDRGGGTWLHPKLSVAFARWCDPKFSVWCDLHIDSLLRGELTEQQKYEQACRIRDDRKSKASNGAREMARWRWDKPVIEANVEYWREQLQLTLDIAC
387078..387320                     PHAGE_Salmon_118970_sal4_NC_030919: RNA polymerase binding protein; STL3553_c03730; phage(gi100043)     1.88e-48            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MAEITALTELQQMNLDILRLVQSDTAAAEKAIAFVAGSKLNFELFKDQLVLAQGEGTALARAEKAIREAKEALDLFTAGV
387731..388219                     PHAGE_Salmon_118970_sal4_NC_030919: loader of DNA helicase; STL3553_c03740; phage(gi100045)     1.39e-118           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MAAPKGNRFWEARSSHGRNPKFESPEALWAACCEYFEWVEANPLWEMKAFSYQGEVTQEPIAKMRAMTITGLTLFLDVTLETWRTYRMREDLSEVVTRAEQIIYDQKFSGAAADLLNANIIARDLGLKEQSQVEDVTPDKGDRDKRRSRIKELFNRGTGRDS
388197..389696                     PHAGE_Salmon_118970_sal4_NC_030919: late promoter transcription; STL3553_c03750; phage(gi100046)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MELDAILDSLSDEEQIELLELLEEEENYRNTHLLYEFTPYSKQREFIDAGHDYPERCFMAGNQLGKSFTGAAEVAFHLTGRYPGTKGYPADGKYGGEWKGKRFYEPVVFWIGGETNETVTKTTQRILCGRIEENDEPGYGSIPKEDIISWKKSPFFPNLVDHLLVKHHTADGVEDGISICYFKPYSQGRARWQGDTIHGVWFDEEPPYSIYGEGLTRTNKYGQFSILTFTPLMGMSDVVTKFLKNPSKSQKVVNMTIYDAEHYTNEQKEQIIASYPEHEREARARGIPTMGSGRIFQIPEETIKCQPFECPDHFYVIDAQDFGWNHPQAHIQLWWDKDADVFYLARVWKKSENTAVQAWGAVKSWANKIPVAWPHDGHQHEKGGGEQLKTQYASAGFSMLPDHATFPDGGNSVESGISELRDLMLEGRFKVFNTCEPFFEEFRLYHRDENGKIVKTNDDVLDATRYGYMMRRFARMMRDIRKPKEKKIPAPIRPVRRGR
389696..391873                     PHAGE_Salmon_118970_sal4_NC_030919: dsDNA binding protein; STL3553_c03760; phage(gi100047)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MADNENRLESILSRFDADWTASDEARREAKNDLFFSRVSQWDDWLSQYTTLQYRGQFDVVRPVVRKLVSEMRQNPVDVLYRPKDGASPDAADVLMGMYRTDMRHNTAKIAVNVAVREQIEAGVGAWRLVTDYEDQSPTSNNQVIRREPIHSACSHVIWDSNSKLMDKSDARHCTVIHSMSQNGWEDFAEKYDLDADDIPSFQNPNDWVFPWLTHDTIQIAEFYEVVEKKETAFIYQDPVTGEPVSYFKRDIKDVIDDLADSGFIKIAERQIKRRRVYKSIITCTAVLKDKQLIAGEHIPIVPVFGEWGFVEDKEVYEGVVRLTKDGQRLRNMIMSFNADIVARTPKKKPFFWPEQIAGFEHMYDGNDDYPYYLLNRTDENSGDLPTQPLAYYENPEVPQANAYMLEAATSAVKEVATLGVDTEAVNGGQVAFDTVNQLNMRADLETYVFQDNLATAMRRDGEIYQSIVNDIYDVPRNVTITLEDGSEKDVQLMAEVVDLATGERQVLNDIRGRYECYTDVGPSFQSMKQQNRAEILELLGKTPQGTPEYQLLLLQYFTLLDGKGVEMMRDYANKQLIQMGVKKPETPEEQQWLVEAQQAKQGQQDPAMVQAQGVLLQGQAELAKAQNQTLSLQIDAAKVEAQNQLNAARIAEIFNNMDLSKQSEFREFLKTVASFQQDRSEDARANAELLLKGDEQTHKQRMDIANILQSQRQNQPSGSVAETPQ
391887..392798                     PHAGE_Entero_UAB_Phi20_NC_031019: hypothetical protein; STL3553_c03770; phage(gi100029)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MEPTTEIQATEDLTLSGDHAAASADGLVVDNANDNAGQEEGFEIVLKDDETAPKQDPAKNAEFARRRIERKRQRELEQQMEAVKRGELPESLRVNPDLPPQPDINAYLSEEGLAKYDYDNSRALAAFNAANTEWLMKAQDARSNAVAEQGRKTQEFTQQSAQYVEAARKHYDAAEKLNIPDYQEKEDAFMQLVPPAVGADIMRLFPEKSAALMYHLGANPEKARQLLAMDGQSALIELTRLSERLTLKPRGKQISSAPPADQPITGDVSAANKDAIRKQMDAAASKGDVETYRKLKAKLKGIR
392798..394090                     PHAGE_Entero_UAB_Phi20_NC_031019: hypothetical protein; STL3553_c03780; phage(gi100030)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MALNEGQIVTLAVDEIIDTISAITPMAQKAKKYTPPASSMQRSSNTIWMPVEQESPTQEGWDLTDKATGLLELNVAVNMGEPDNDFFQLRADDLRDETAYRHRIQSAARKLANNVELKVANMAAEMGSLVITSPDAIGTNTADAWNFVADAEELMFSRELNRDMGTSYFFNPQDYKKAGYDLTKRDIFGRIPEEAYRDGTIQRQVAGFDDVLRSPKLPVLTKSTATGITVSGAQSFKPVAWQLDNDGNKVNVDNRFATVTLSATTGLKRGDKISFAGVKFLGQMAKNVLAQDATFSVVRVVDATHVEITPKPVALDDVSLSPEQRAYANVNTSLADAMAVNILNVKDARTNVFWADDAIRIVSQPIPANHELFAGMKTTSFSIPDVGLNGIFATQGDISTMSGLCRIALWYGVNATRPEAIGVGLPGQKA
394131..394691                     PHAGE_Salmon_vB_SemP_Emek_NC_018275: hypothetical protein; STL3553_c03790; phage(gi399498797)     1.05e-132           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MGVMLYKQGRGTKVWGKEVQAKVVDDSDVEDHLADGWVKHPNEVPETNDEPIGESCVVKKDMGEVSDGYHTFNELYAHRVRLFSTLMNAFRESAWWSFQHHDGEQWDGWVLAGIDTPEGAVTYHLPESEIEHLPKGTEIEFGKEWDGHTADDVLNRLLSLRPKEPATKERKKPGPKPKAESDADKD
394675..395175                     PHAGE_Entero_UAB_Phi20_NC_031019: hypothetical protein; STL3553_c03800; phage(gi100032)     1.29e-121           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MQIKTKGDLVRAALRKLGVASDATLTDVEPQSMQDAVDDLEAMMAEWYQDGKGIITGYVFSDDDNPPAEGDDHGLRSSAVSAVFHNLACRIAPDYALEATAKIIATAKYGKELLYKQTAISRAKRAPYPSRMPTGSGNSFANLNEWHYFPGEQNADSTTPHDEGNG
395135..396553                     PHAGE_Entero_UAB_Phi20_NC_031019: replication and recombination DNA helicase; STL3553_c03810; phage(gi100033)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MPIQQLPMMKGMGKDFKNADYIDYLPVNMLATPKEILNSSGYLRSFPGITKRYDMNGVSRGVEYNTAQNAVYRVCGGKLYKGESEVGDVAGSGRVSMAHGRTSQAVGVNGQLVEYRYDGTVKTVSNWPADSGFTQYELGSVRDITRLRGRYAWSKDGTDSWFITDLEDESHPDRYSAQYRAESQPDGIIGIGTWRDFIVCFGSSTIEYFSLTGATTAGAALYVAQPSLMVQKGIAGTYCKTPFADSYAFISHPATGAPSVYIIGSGQASPIATASIEKIIRSYTAEEMATGVMETLRFDSHELLIIHLPRHVLVYDASSSQNGPQWCVLKTGLYDDVYRGVDFMYEGNQITCGDKSEAVVGQLQFDISSQYDKQQEHLLFTPLFKADNARCFDLEVESSTGVAQYADRLFLSATTDGINYGREQMIEQNEPFVYDKRVLWKRVGRIRRLIGFKLRVITKSPVTLSGCQIRLE
396557..397258                     PHAGE_Salmon_BTP1_NC_042346: hypothetical protein; STL3553_c03820; phage(gi100009)     4.05e-155           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MADPSLNNPVIIQATRLDASILPRNVFSRSYLLYVIAQGADVGAIAGKANEAGQGAYDAQVKNDEQDVELADHEAKIQQLRIDVDDHEIRIAANTNAIAALDVRLTTAEGEIITLQADVSALDGRVTTAEGNISALQVDYVSKTATATQSLASPLNVTTSYSVGGTKVIGARQLGWTAATGAALLGAFNANQAYTVSATYTQSEVSAMATGLQQARQRIKALEDAIRTHGLIN
397258..397713                     PHAGE_Salmon_BTP1_NC_042346: hypothetical protein; STL3553_c03830; phage(gi100010)     8.14e-110           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MITFTPTRNIDLIETVGNHPDIIAGSNNGDGYDYKPECRYFEVNVHGQFGGIVYYNEIQPLTFDCHAMYLPEIRGFSKEIGLTFWRYILANTTVQCVTSFAARKFRHGQMYCAMIGLKRVGTIKKYFKGVDDVTFYSATREELIDFLNHGR
397716..398405                     PHAGE_Salmon_BTP1_NC_042346: hypothetical protein; STL3553_c03840; phage(gi100011)     5.05e-155           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MLYAFKLGRKLRGEEPYYPEKGGKGGSSSSGAKEAAKATQYAADLQNQQFNRVMEQLAPYAAAGLPALQQIQQLSTLEGQNSALNQYYNSDQYKQLADQARYQSLNAAEATGGLGSTATSNQIASIAPTLGQNWLSGQMQNYGNLLNVGQSAAAGQASAGQNYANNAGNLAQQMAAIRSQGSGQSTLGSAISGGTSGALAGAGLAGMLGASTPWGAGIGAGIGLLGSLF
398415..399785                     PHAGE_Salmon_BTP1_NC_042346: hypothetical protein; STL3553_c03850; phage(gi100012)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MATFQLAGLPSMQVANQSAPGQPSLSSYDFSQRPNVGVQLAQGLGAVGQAIQQNEAAQRLSDFQKAFGQAYAAGDRDALRQLAATNPDQIETIRQGMGFVDADRNQTMGDMSARLNIAAAQGPEAVMRELATHQNTLQQIGVSPEQAWQTYQQSPEGFTQLTDLIGMHAVGPEKYFDIQDKLTGREIDRGRLAETIRSNKAGEGLQARGQNITMRGQDMSAATARRGQDLATQRANARTISGSEGNRVVQLADGRTVSVGGKLHGAGANAFYEGIDDNGNMVRVPASAIAAPPTSAASAQNYAMKKDIDAIANADASALDFMTGMTGGAGNPAIGADVRSRLTGKEQRQLYNSAQRIQGRMQNQGVAAARDMGASGINTIAEAKMYFQGMPQVDYSSPEAMQQSIREIQEYTNNYNQQYNVNVDNGGQKSSRQQPATQQSVGGSYTSKSGIQFTVE
399785..401602                     PHAGE_Entero_UAB_Phi20_NC_031019: hypothetical protein; STL3553_c03860; phage(gi100038)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MKVTANGKTFTFPDGISTEDIGAAIDEYFAGQASAAETQPAEQQTEPSLMQRAGDFLTGGQGAGQIAEQAGRGLVNIPFDVLQGGASLINAISQGLGGPKVLDDVYRPVDRPTDPYAQAGEAIGGYLVPGVGVAGNMAIGSIAEAANQQGDFAGNVAKNAAINLGAQGALSAVAKGIGRGVTALRGDISPADQQLLKRAAAADVPVMTSDVVPPKTKLGNQLQDYSEGVIAGTGPMRAAQQDARSKLVNRFTEKYGDYDPSVVVDSLKSGVAREKSLAKSKLNDLSGRMVGKTVDTSGAIRAIDGAVNELGKLKGVSDTQTISALNDYKNAIQEISSGDDAFELLDKLRTQFRIDVKGDRTVLPSMSQTMVDRVYNSLTNSLSKSIAKGISPKDASAWRAGKADYAKMATHATQTRLKNVLNKGDLTPETVNTIVYGQYGSDIARLYGKLDQKGKDMLRAAYISKIADKVGDSPQKMMTELGKLQKQANGQVFKTVFGGKHGKEIEGMLSILEATKRASEANVVTKTGMTLAPLVRVIGNLKTGGALLAGETGIGLMSRVYESPMARNALLRLANTKAGTPAYERALSQAATAVRPLLANQATQQ
402893..403636                     PHAGE_Salmon_SPN3UB_NC_019545: hypothetical protein; STL3553_c03870; phage(gi423262398)     2.09e-141           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MRQKAMLSSNKNSEAQRWLDRQASVSNKSYDGNIDMNIVAKSDYNFQGFTFNPVTEGGSIWFTSTELAKALGYKKTDAISQIYARNADEFSDSMSLTLNMKVNGINNSLRNKSVRVYSLRGAHLVAMFASTPKAKEFRRWVLDILDREATDSPIAKQFTDDELISLCYLQLWMEKSQRVSQQLYPAMKQAKSEYAGMLYDIAHDIRYMTVETKKILLREVQELDNSNIVVKHAQPMLAMLRGEEWIH
403636..404493                     PHAGE_Escher_PA28_NC_041935: clamp-loader subunit; STL3553_c03880; phage(gi100040)     2.37e-33            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MDVQDGAKRKADSYELPASIESCHKDHLMTSLNLAVHEPNVDPQPLPVIEWSGLRVVTTETLASGYGTDEANIRKNLSRNAGRFIEGIHIFTIKGQELKNLRVTNSHAQISNKARSIVLWTEKGAARMSKIVDTDEAWSFFERLEDAYFRPLVKSILPQTYEQALEDLLLKVKENRLLEQQRDRAVKEKLWIAEKREATAMATASAAVRAKNKLAERVGEGKNYAAIIPVEKKLGQKFKWQPLRKWCRDNDVSPHDVDDPRFGSVKSWPRAAWLAVYGVDLRKIF
404605..406572                     PHAGE_Salmon_BTP1_NC_042346: hypothetical protein; STL3553_c03890; phage(gi100014)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MSDITANVVVSNPRPIFTESRSFKAVANGKIYIGQIDTDPVNPANQIPVYIENEDGSHVQITQPLIINAAGKIVYNGQLVKIVTVQGHSMAIYDAHGSQVDYIANVLKYDPDQYSIEADKKFKYSVKLSDYPTLQDAASAAVDGLLIDVDYHFTDGETVDFSGKKLTIECKAKFIGDGKLTFENLGSGSRIVHPHMQSQTVPYVISRWDSNGEWITEPSTIISTLTQSRTQGYAPTVNDVDIYNSLPDNVKNQNLISHLIISNSSGIDVFYPKATFGSYESFKNNNVKFWYPRDFYGDMSNCIAFTAWDSTDYYHGNYVIGGSTNYGSGSGVCFYRNDGGVGHDGGVIGGFTPYRCGESGVKTYQNEVNGISQRCYNLRFIDINPIETYYDGVDLNADYGTPTERQHDYTLAQYAWNNLPTNHIVSNIQAYKTHGVGIFGDGSTGFYRDIYASYSRGAGIFIKGSGKNFKNLTSIQNNAANTPGENQIILDGANIIDGVNIINYTQPTGLAIFAPNSTVTNLNAPSVPSSSINIGNIEGLVVGNLIHVQPNLANQTSAVYLNVVNTSVASKREDTIKIGPGASEVTRYVISGSSPRLTMRENHGDFGSVNIAFSGTVLPDEAVPDANSYAVYWDGTNLTALINHGGVLTRQKLTT
complement(406608..408530)         PHAGE_Salmon_BTP1_NC_042346: hypothetical protein; STL3553_c03900; phage(gi100015)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MEHLKYRPDIDGLRAVAVLSVVIFHYFPSILPGGFVGVDIFFVISGYLITSIILKSASSNSFSYVEFYKRRILRIFPALSIVLISCIIIGWVYFFQDDYKSLGKHVFSGAFFISNLTLWSESGYFDSQSYLKPLLHLWSLGIEEQFYILWPIVILLCFKSKYSKRNILLSCAAIFIVSYTISVFTMAYEGGANYYSPASRFWELMAGAIIATLRFMGIKTSVSKSMSLIGVIIITLSIALINEKMAFPGYIAIIPVIGASLIIASNGNDWIASKILSFKPIVFIGLISYPLYLWHWPVYSFYRSIFSGSPSTNELLILMALALVLAILTYFLLEKPLRHSAKRSVATIILAVVVFGSGVFGIVTYSMNGIKERSVNKSAGEYASVTNVYDYYKYGELLRGGICHSVLLKDAISNGCIKNSRNNIFIIGDSYAAALYNGLSSYIKNNNKKYVISQMTDGNAPPLFVSGKDDLQRDVSSINSGRIKEIGMVKPEIVLLTWSVRGSNGVHDKKLAIEALSLTIKKIKKASPQSRLIVVGPVPEWNANLVKVISNYTSEFKKTPPIYMSYGLNDEIKGWDKYFDENVPKLGAEYISAYSALCNESGCLTRVGDGPDFVTAVDWGHLTKPGSDFLFEKIGKYIIN
complement(408602..408877)         PHAGE_Salmon_BTP1_NC_042346: hypothetical protein; STL3553_c03910; phage(gi100016)     4.82e-59            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MLKLFVDYVSVGVLSTTLDFMTFGAVFSLIGLKRAIPNVLSPCVASTFRFSSTPILHLSGKQRQVGVWHFSLKNNKTHCQFVIKTNTNHGC
409489..409535                     attR                                                                                 N/A                 ATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCAT
complement(409860..410660)         PROPHAGE_Escher_MG1655: IS3 transposase B; STL3553_c03920; phage(gi16128284)         5.16e-147           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MLASTPPTSTGVFNRALSSLAIACICKRYVWHQRRHQINRRQRFHLVCDNVFREAFSDAKQRYGAPRLTDELRAQGYQFNVKTVAASLRRQGLRAKASRRFRPVSYRKHGLPVSENLLKQDFYASGPNQKWVGDITYLRTGEGWLYLAVVIDLWSRSVIGWSMSSRMTAQLACDALQMALWRRKCPENVIVHTDRGGQYCSTDYQSLLKRHNLRGSMSARGCCYDNACAESFFHTLKVECIHGEDFVSREIMRTAVFNYSECDYNR

#### region 2 ####
1142650..1144596                   PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; STL3553_c10930; phage(gi371496158)     2.75e-46            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MTALLELCNVSRSYPSGEEQVAVLKDISLQIHAGEMVAIVGVSGSGKSTLMNILGCLDKPTSGTYRVAGRDVSTLDPDALAQLRREHFGFIFQRYHLLSHLTAAQNVEIPAVYAGIERKKRQARARELLLRLGLSDRVDYPPSQLSGGQQQRVSIARALMNGGQVILADEPTGALDSHSGEEVMAILRQLRDRGHTVIIVTHDPLIAAQAERIIEIHDGKIVHNPPAQEKKREQGVDAAVVNTAPGWRQFASSFREALSMAWLAMAANKMRTLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRAMGTNTIDIHPGKDFGDDNPQYRQALKYDDLVAIQKQPWVNSATPSVSKSLRLRYGNIDIAVNANGVSGDYFNVYGMSFREGNTFNAVQQQDRAQVVVLDANTRRQLFPNKANVVGEVVLAGNMPVIVIGVAEEKPSMYGNSNLLQVWLPYSTMSDRIMGQSWLNSITVRVKDGVDSDQAEQQLTRLLTLRHGKKDFFTWNMDSVLKTAEKTTYTLQLFLTLVAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLVGGALGISLSMFIAFMLQLFLPGWEIGFSLTALASAFLCSTFTGILFGWLPARNAARLDPVDALARE
1142776..1142790                   attL                                                                                 N/A                 TCCGGTTCTGGAAAA
1144628..1144771                   hypothetical protein; STL3553_c10940                                                 N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MQQCRHQALALNKNASRSGWHFASWMYTMRQRSYATASASMGTMTLA
complement(1144726..1144947)       PHAGE_Lactoc_bIL312_NC_002671: Csp; STL3553_c10950; phage(gi13095918)                1.92e-18            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553METGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVRFDVHQGPKGNHASVIVPIEAEAVA
1145271..1145591                   PHAGE_Pectob_CBB_NC_041878: putative major capsid protein; STL3553_c10960; phage(gi100319)     4.84e-08            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MGKTNDWLDFDQLVEDSVRDALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEKA
1145622..1147898                   PHAGE_Agroba_Atu_ph07_NC_042013: putative virion structural protein; STL3553_c10970; phage(gi100292)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRSEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDIVNFISHGTRKDEPSQSSDLGNQPTGDEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSVEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDNAIEALTEAIKMSRAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNLLLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMGEIKKVFTPEFRNRLDNIIWFDHLSGEVIHQVVDKFIVELQAQLDQKGVSLEVSQEARDWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNALTYDFQSAQKHKPEAAH
1148090..1148548                   PHAGE_Hypert_2_NC_014321: IS element Dka2 orfA; STL3553_c10980; phage(gi300116744)     1.70e-18            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MGDEKSLAHTRWNCKYHIVFAPKYRRQAFYGEKRRAVGSILRKLCEWKNVRILEAECCADHIHMLLEIPPKMSVSSFMGYLKGKSSLMLYEQFGDLKFKYRNREFWCRGYYVDTVGKNTAKIQDYIKHQLEEDKMGEQLSIPYPGSPFTGRK
complement(1149011..1149694)       PROPHAGE_Escher_CFT073: transposase insF; STL3553_c10990; phage(gi26249410)          2.94e-37            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MQADKTLNIGRDRLFNLLGEYRLLVPVKRAYHKTTNSHHRFYRHPNLLKPGPEQVTALEPEQVWVADITYLPLRSGTACLSLVTDACSRKIVGYHVGENLQTENVVKAFRQALRRRKTTGPLVHHSDRGLQYCSVLYQSVHERNGITCSMTDGYDCYQNALAERINGILKNEFLLSRPADLEQAREIVKESVAIYNHERPHLALKYKTPDDVHQAFYRQKTVNLYQD
1163408..1163422                   attR                                                                                 N/A                 TCCGGTTCTGGAAAA

#### region 3 ####
complement(1219482..1220684)       PHAGE_Agroba_Atu_ph07_NC_042013: hypothetical protein; STL3553_c11560; phage(gi100242)     2.14e-49            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MTQFASPVLHSLLDTDAYKLHMQQAVFHHYYDVQVAAEFRCRGDDLLGIYADAIREQVDAMQHLRLLEDEFQWLSGLPFFKPDYLNWLREFRYNPAQVCVTNDNGKLNIRLTGPWREVIMWEVPLLAVISELVHHYRSPNAGVDQALDALESKLVDFTALTANLDMSRFHLMDFGTRRRFSREVQQAIVKRLQQESWFVGTSNYDLARRLALTPMGTQAHEWFQAHQQISPDLATSQRAALAAWLNEYPDQLGIALTDCITMDAFLRDFGIEFASRYQGLRHDSGDPVAWGEKAIAHYEKLGIDPLTKTLVFSDNLDLPKAVELYRHFASRVQLSFGIGTRLTCDIPQVKPLNIVIKLVECNGKPVAKLSDSPGKTICHDKAFVRALRKAFDLPQVRKAS
1220830..1220844                   attL                                                                                 N/A                 TTATAAAAATGTAGC
complement(1220879..1222219)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage integrase; STL3553_c11570; phage(gi169257268)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MKSCTLVNAPGRQEGLMANASYPTGVENHGGSLRIWFLYKGKRVRENLGIPDTAKNRKIAGELRSSVCFAIRMGNFNYVEKFPNSPNLARFGQDRKEITVLELTERWSELKRMEISSNTMSRYESIIKNMLPLIGENKMVSAVTTEDLLYVRKELLTGFQVMKKDHRTQVKGRKSSTVNNYMMLMAEIFQFGTDNGYAKENPFSGINRLKKAKGEPDPLTTDEFIRFIQACGHQQMRNLWSLAVYTGMRHGELCGLAWEDIDLHAGTIIVKRNLTQTDEFTLPKTDAGTDRVIYLIQPAIDALRNQAQLTRLGRQFEVEVKLREYGQSVIQPCTFVFSPQCVKRGPRTGYHYAVNSINKIWAPIIKRAGIRYRNAYQSRHTYACWSLSAGANPNFIATQMGHTDAQMVYKVYGKWMSEKSAEQVSLLNQALFRYAPSLPQSMVAAQ
complement(1222216..1222464)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage excisionase; STL3553_c11580; phage(gi169257269)     1.63e-55            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MSNIIQLTPNKWVSEKVLIAVTGLKPGTITRARKESWMLGREYLHISPDGNPKPSSECIYNREAVDQWIEAQKKNQPGAKTT
complement(1222505..1222744)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; STL3553_c11590; phage(gi169257270)     1.38e-52            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MRLINRSKQSPLGRRACDVALAAHHEKFGDYGRQKHVTNYTVVVDGVKVPVEVVNRATSYVATAMIGVRKLRNLPAQAN
complement(1222787..1223896)       PHAGE_Phage_Gifsy_2_NC_010393: conserved hypothetical bacteriophage protein; STL3553_c11600; phage(gi169257271)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MENTNIVTTEQQAPNTISASNAIFNVQALGQLTAFANLMADSQVTVPAHLAGKPADCMAIVMQAMQWGMNPYAVAQKTHLVNGVLGYEAQLVNAVIASSSAIHGRFHYRYGGDWERCTRTQEITRDKNGKNGKYTVTERVRGWTDEDEIGLFVQVGAILRGESEITWGEPLYLSGVVTRNSPLWVSNPKQQIAYLGVKYWARLYCPEVILGVYSPDEVEQREEREINPAPVQRMSVQEITSEVSTRTSAQESAANVDAVADDLRERIDTASSVDQAKAIRADIESQKALLGTALFTELKNKAVKRYYQVDAQNKVEAVINSIPNPGEPEAAEMFAKAESTLGAAKRHLGDELHDKYRVTLDDMKPEYIG
complement(1223907..1226792)       PHAGE_Phage_Gifsy_2_NC_010393: putatitive bacteriophage exodeoxyribonuclease VIII; STL3553_c11610; phage(gi169257272)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MSGTNPVFLVRKAKKSSGQKDAVLWCSDDFEAANATLDYLLIKSGAKLKDYFKAVATNFPVVNELPPEGELSLTFCDYYQLAKDNMTWTQIPGVTLPSSEAAAAARQHIVDGVDTETGEVLEDHTENFGNESNSPAQATAPAPELTVVATMPLRHRVLAQYIGEGEYLYHVDASQKKEILRLEMDTDNSYVQNLLLAAENVEAFKKAIEHDIHKIVNAVKKVFPVDGKTPELATVIQFLKTWFETEHIDRGLLVKEWAKGNRVSAIQRTESGANAGGGNKTDRNPDYEHTLDTLDVEIAMATLPMDFNIYELPGSVYRRAKEIVKKKESPFKEWSAALRATPGILDYSRAAIFALIRSAHPEFYHYPGRLQGYINANLTETDHENPTEEALTAARHTPEKDAVEEANRQLAAARGEYVEGISDPNDPKWVKTGTSQPTTEPELVKNVGNGIFDVSALMQNSSTHGTETNPETTSNVQVQKADSDEKQAGDAVQAGEDDLGTGKEAVTVENQNQAEAQQNVPESQQEEPEAAWPEYFEPGRYEGVPNEVYHAANGISSTQVKDARVSLMYFNARHVEKTIVKERSPVLDMGNLVHALALQPENLEAEFSVEPEIPEGAFTTTATLREFIDAHNASLPALLSADDIKALLEEYNATLPSQMPLGASVDETYASYEQLPEEFQRIENGTKHTATAMKACIKEYNVTLPAPVKTSGSRDALLEQLAIINPDLVAQEAQKSSPLKVSGTKADLIQAVKSVNPAVVFADELLDAWRENTEGKVLVTRQQLSTALNIQKALLEHPTAGKLLTHPSRAVEVSYFGIDEETGLEVRVRPDLELDMGGLRIGADLKTISMWNIKQEGLRAKLHREIIDRDYHLSAAMYCETAALDQFFWIFVNKDENYHWVAIIEASTELLELGMLEYRKTMREIANGFDTGEWSAPITEDYTDELNDFDVRRLEALRVQA
complement(1226919..1227155)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; STL3553_c11620; phage(gi169257273)     2.92e-52            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MEIVKIEMNLKAVNKSIALFNCENLDGGYVLGKFDSPHCAVKAISLLTVKVSDGEQAGFGNYRSYKLDYSEKFYQTIH
complement(1227240..1227398)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; STL3553_c11630; phage(gi169257274)     1.88e-31            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MLKQCGYCRKSIDEGKEVKNTLLYRNGSQLASKEKEYCSRQCAEYDQMAHES
1227520..1227666                   hypothetical protein; STL3553_c11640                                                 N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MPYRRPAERFTPDNDALVVDETNDKTKGSICKAKSATKSSILGHKNST
complement(1227701..1228042)       PHAGE_Phage_Gifsy_2_NC_010393: putative bacteriophage regulatory protein; repressor; Lambda gpCI analog; STL3553_c11650; phage(gi169257276)     2.48e-77            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MADLSRRVMLSHTSVRKWASGTSVASGERLKRLSAVTGRPEYWFFMEPGDESEGERAEPKPRVLDEKEETLLSLFNQLPEAEKLRVILHTKAVLQEMDLLKNNVFDLINDLKK
1228436..1228810                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage transcriptional activator; Lambda gpCII analog; STL3553_c11660; phage(gi169257278)     4.50e-72            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MAYQAKRHQPNNHRGYLPMENAIARKLDPPEINPIEIESVLLNRLASVGQKSYAEHMGISESTVSRRKAEGYFCNMAKELAFLGIQAAPPEAVLVSRNYLTAVEILADAGLKAERARPDALGWD
1228895..1229878                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA replication protein; Lambda gpo homolog; STL3553_c11670; phage(gi169257279)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MSMSNTAEIYKFPAPIPTQQECRMADLENGYLRLANQIQDALCIVELSGREFRVLNAIIRLTYGWSKKSDRIANSLIADKTTLKVKHVSEAVLSLAYRNIIILRRIGQTRYIGINTNLDKWAYSKPHCSKCPVSFPDDEIATWIISVPETRDSYPRKGGRASPKTGIVIPENRDSVLPHSAIPENGDSYPRKEGRASPKTGNTKDIIPKTNIKDLTPFNPPKGKVKFDPLSIPVPEWLNAASWNEWVTYRQQSGKPIKTELTVTKAFRLLKECLDEGHDPVNVINTSIANGYQGLFKPKFALNDRRAGRDVNHISAPDKTIPTGFRG
1229881..1230630                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA replication protein; STL3553_c11680; phage(gi169257280)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MKNVIGTGSALDRLKRIIPASVQPKFSTADEWRAWQEAEGRKRSEELDRMNQKSRTEKIFGRSGIQDLHRSCTFANYEVSGEGQRKAYTMAKSYAQNFGSGFASFVFSGGPGTGKNHLAAAIGNHLLAGGHSVLVVTIPDLMLRVRECYDGGQSEASLLDDLCKVDLLVLDEVGIQRGSSGEKVILNQVIDRRLSSMRPVGVLTNLNHEGLLDSLGARVIDRLQMDGGMWVNFDWESYRKNVSHLRIVK
1230641..1230988                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; STL3553_c11690; phage(gi169257281)     7.30e-80            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MARPKTQSERMIILERIIGLVKEQGRITTNDVVAIFGVHRTTAEKYLRIALERGGFIRHGRCGIFRDQRAVIDYDLRRYSSSQVTGFSALPVLEKSPVMQVYGASKMSINKGGAQ
1230985..1231296                   PHAGE_Phage_Gifsy_2_NC_010393: conserved hypothetical bacteriophage protein; STL3553_c11700; phage(gi169257282)     5.67e-70            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MSNIDKRALREVAERATPGNWRRTSSLFNGITVTPFSLCGEEVTLAHTVEKRDAEFIAAANPATVLALLDVLYEFGEDEVAISEYVTNLEDALRVAAAPQQEE
1231374..1231664                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; STL3553_c11710; phage(gi169257283)     2.57e-59            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MNYEDKLMYQRMIFEEGKEPRLYSSQHDSKFIPISNNNGKVQKVPVMEFKDTRGDVFYAYNYAYSGKKPSNDEIYKAIDELKPIGEKFEMSKTISD
1231956..1232189                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage damage-inducible protein DinI; STL3553_c11720; phage(gi169257284)     4.88e-51            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MRIELVISRAKQLPEGAVPALEKELITRLQNQYENCNLTIRRGSQDGLSIVGAADGDKKRIQSILQETWESADDWFY
1232605..1233207                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; STL3553_c11730; phage(gi169257286)     2.56e-147           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MAHELQLIKQSSGILIPATPETSEILQSKIKLGAVLVAEFRQVRNPAFHRRFFALLNLGFEYWEPTGGTISANERKLVNGYAKFLAAYGGNESALLDAAEQYLEQIANRRVTNGISLCKSFDAYRAWVTVEAGHYDAIQLPDGTLRKHPRSIAFSSMDEVEFQQLYKSALDVLWRWILSRTFRTQREAENAAAQLMSFAG
1233207..1233413                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; STL3553_c11740; phage(gi169257287)     1.48e-44            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MAMKYSWFHHHDCTTEQADTLISDYQKRGVRTEKSLNPDFITWTVSAKLPEYAHRVRTPKSLRQKVWG
1233416..1234027                   PHAGE_Phage_Gifsy_2_NC_010393: NinG; STL3553_c11750; phage(gi169257288)              1.46e-147           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MAKLPRRKCANKECRQWFHPIREGQIVCSYQCASAVGKEQTRKAREAAQRKAQSLQRAAEKKERAAWRQRKAAVKPLKHWIDLTQRAVNDICRETELAEGLGCISCGTKTAFAWHAGHYRSTAAAGHLRFTRFNIHLQCDVYNVYKSGNIEAYRAALVERYGEAAVLALENNNTPHRWTVEELKEIRLAALADLRALKKLEAA
1234160..1234957                   PHAGE_Phage_Gifsy_2_NC_010393: prophage antitermination protein; late gene regulator; Lamba gpQ homolog; STL3553_c11760; phage(gi169257290)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MNLESLPKYFSPKSMMPGAVPCGITSDTLTITDVMASLGLLTAKAAVGIELYLAKAGVLSSENIIAYIRQLAEQRAERHGALRKMEKGKRSKFLDTMARYVFRDYSLSAASLVTCSSCHGAKLIDAEVFTNKVTYPDGKPPKWVKDTKGISPSDWEVWKSVREQVRVVCKACDGKGHVKNECRCRGRGEILDKKKSELQGVPVYKKCPRCKGRGYPRLKDTEIFKALGVTEMVWRYNYKLFFDRLVEHCHIEESYAEKVLGNVTR
1235515..1235640                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; STL3553_c11770; phage(gi169257292)     8.90e-23            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MKMHNDPHSMDSQSIFAGSQLLPMEKTSHLALSVGFRSHLA
complement(1235776..1236225)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; STL3553_c11780; phage(gi169257293)     2.59e-107           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MKNTALGKFIFIVGTALLLGGCSGMVMPPYATHGTSVGIIAPAGGYSEWHTDSRNHTTGDSHSQSQGNCTQSEDSQLNENGLTRTHQSNCNTRSQTHSSSTSKTRSSSVGFSVGGPVGASIGLIKQMESMNRAPANDMSSNEMFKNFGF
complement(1236586..1237272)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage virulence determinant; GtgA; STL3553_c11790; phage(gi169257294)     4.22e-170           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MPTGIKPIFINNMMSTYGLSHPHDSKVFPDLPEHQDNPSQLRLQHDGLATDDKARLEPMCLAEYLISGPGGMDPDIEIDDDTYDECREVLSRILEDAYTQSGTFRRLMNYAYDQELHDVEQRWLLGAGENFGTTVTDEDLESSEGRKVIALNLDDTDDDSIPEYYESNDGPQQFDTTRSFIHEVVHALTHLQDKEDSNPRGPVVEYTNIILKEMGHTSPPRIAYEFSN
1237542..1237877                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage lysis protein; holin; STL3553_c11800; phage(gi169257295)     2.16e-75            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MKMNDKTPEFWAAVLTGLKNAWPQILGALMAGLIAYGRLIYDGATRKNKWLEGVLCGALSLCVTSALDVVGLPVSISPFVGGIIGFVGVDKLREIAISALKKRAGVNDENQ
1237864..1238313                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage lysis protein; endolysin; lysozyme; STL3553_c11810; phage(gi169257296)     3.42e-106           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MRISEKGITLIKEFEGCSLTAYPDPGTGGDPWTIGYGWTHSVDGKPVKPGMMIDEATAERLLNTGLVGYENDVSRLVKVKLTQGQFDALVSFAYNLGARTLSSSTLLRKLNAGDYAGAADEFLRWNKAGGKVLNGLTRRREAERALFLS
1238310..1238810                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage lysis protein; Lambda gpRz homolog; STL3553_c11820; phage(gi169257297)     9.14e-115           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MMFNWKTMFVGLLLVSLIVAGRLANHYRNNAITYKEQRDTVTHRLTLANATITDMTKRQRDVAALDEKYTKELADAKAENDALRDDVAAGRRRLYVNATCPAVPTGKSTSTARMDNAASPRLADSAQRDYFALKERVKTMQKQLEGAQAYIRTQCHGNAGKTSNQW
1239018..1239551                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA packaging protein; terminase, small subunit; STL3553_c11830; phage(gi169257298)     1.44e-127           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MDQEIKSLELNITQLSAITGAHRQTIASRLKGVKTSGGNGSNLKIYRLVDILTAMMTMPAVTGENDPNKMKPSDRRAWFQSEMTRIELEKEMRTLIPASEVLSVYAVMAKTVVKTLEILPDLLERDAALPPDALEMTQKIIDQLREDLASMTYQACADAINGDDDDNGDEGQEEEQE
1239505..1241646                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA packaging protein; terminase, large subunit; STL3553_c11840; phage(gi169257299)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MMMTTVTKGKRKSRNSLASAVVAGCDISSMFRPPRRMKISDAVRKYMRVPRDAGNSVAWESTLTPYVVEAMNCLSSRSYDAVVFVAPARTGKTLGLIDGWISYNIVCDPSDMLVVQMTQDKAQEHSKRRLAKMFRHSPAIARRLSPHRNDNNVHDKTFRDGSFLKIGWPSINVFSSSDFKCVALTDYDRFPEDVDGEGDAFSLASKRTTTFMSLGMTLVESSPGREITDTRWKPSSPHEAPPTTGILSLYNRGDRRRWYWPCPHCGEYFQPSMANMTGYRHIADPMEASEAARIQCPHCHKLTEPQQKRELNNRGVWLREGQHIDRDGNITGEARRSRIASFWMEGPAAAYQTWAQLVYKLLTAEEEYERTGSEETLKAVINTDWGLPYQSRRSLEARSGDALMARAEDVSKRTVSDGVRFIVATVDVQGGKKRRFVVQVVGYGAYGERWIIDRYNIRYSLRVNEDGESQPVNPAARPEDWDLLKTDVLEKTYPLAADPEQFMPVLAMAVDSGGEDGVTDNAYAFWRRCKRKGVAGRVYLFKGDSTRREKLITKTYPDNTERSERRAKARGDVPLYLLQTNALKDRVAAALEREEPGANYIHFPDWLGPWFYEELTYEERSADGKWKKPGRGNNEALDLMCYAHALAILRGYERINWEKPPGWARLPEKDAAKTTQPVEVRQQEQHEGGEKAVKARKKKILPAWGGGSGGGWL
1241643..1241849                   PHAGE_Phage_Gifsy_2_NC_010393: conserved hypothetical bacteriophage protein; STL3553_c11850; phage(gi169257300)     1.38e-41            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MTRAGLQELYNAYLEAELAVLKGKSIMLNGQSMTMESLEEIRKGRREIEDRLQRLNNPRRLFTRARLS
1241846..1243393                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage portal protein; STL3553_c11860; phage(gi169257301)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MNFIDKAISMMSPGWAVSRLRSRAVIKAYEAAIPTRTHKIKRENRNANQLNQIAGKSLREQARWFDNNHDLVVGALDKMEERVIGAKGIIVEPQPLTVAGTLNNALAEQIRARWAEWSVSPDVTGQYTRPVLERLLLRTWLRDGEVFSQMVAGKMPGLEPVAGVPFWLEAMEPDYVPMEQTDSTNNLIQGIYFNDWQRPKSYIVCKSWPGFATAMVATKLIDAENMLHLKFTRRLNQARGVTLLAPVIIRLLDLKEYEDSERLAARISAAFAMFIRRSDAMVQDGDAPDYADKDRDLDIEPGTILKDLLPGEDIGTIKSDRPNANLESFRMGQLRAVAAGVRGSFSSIARNYDGTYSAQRQELVEAQEGYAILQDNFIAAVSRPVYRRWLATAITAGVIDVPTDTDMATLFNAVYSGPVMPWIDPLKEANAWRILIRGGAATESDWVRARGGAPAEVKRRRKAEIDENRKLGLVFDTDPAHDPGEQDNAGSEDNSGGDKNAAGDDSRERTRGGKQ
1243344..1245398                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage Clp protease involved in capsid processing; STL3553_c11870; phage(gi169257302)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MPPVMTAGNGRGEGSSNSWYSIRAAANNTAEVRIYDEIGGWGISARWFAEELAALGQINRINLHIHSPGGAVLDGIAIYNLLKNHPAQKTVYIDGMACSMASAIAMVGNPIIMPENAMMMIHKPRGVAGGEAEDIREYADLLDKIESVIIPIYTEKTGKTPEDIAAMLAKETWMSGAECVSEGFADKLIQPVKAMACIHSKRVEEFEHMPQSIKGMIIAPQGNAGAQPQPQAKAPESQIQSQAQSLVTVDENAIRARLQEEQRNRITGIQNVFSLSGDRYASLMAKCIADVDCSLEMAKDRLLAEMAKGITPTNQLNGPQNRAEFHAGMYTGNGNITGDAVRAAVMARAGYEEAQKDNPYNCMTLRELARISLVARGTGVSSMNPMQMIGMAFTHSTSDFGNILLDVANKSILQGWQEAPETFDAWTKKGQLSDFRIAHRVGMGGFSSLRQVREGAEYKYVTTGDKQATIALATYGELFSITRQAIINDDMNMLTDVPMKLGRAAKATIADLVYDVLISNQKLSSDNVALFDKTKHANVLEKAVMDVASLDKARQLMRMQKEGDRHLNIRPAFVLVPTAMESVSNQVIKSVSVKGADINAGIINPVKDFATVIAEPRLDDASQSTFYLTAAKGSDTVEVAYLNGVDEPYIDQQEGFTVDGVTTKVRIDAGVAPVDYRGMVKCTV
1245489..1245812                   PHAGE_Phage_Gifsy_2_NC_010393: conserved hypothetical bacteriophage protein; STL3553_c11880; phage(gi169257303)     8.23e-70            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MAKNYVEDGKTIEIVATTSLKSGDLVQVGDMFAVAVTDIAAGSAGTGIAEGVFSIPKLTTEDIAVGKKVYLKDNVVQTDATGSLPYVGVVWAPAANGDETVPVKING
1245805..1246104                   PHAGE_Phage_Gifsy_2_NC_010393: conserved hypothetical bacteriophage protein; STL3553_c11890; phage(gi169257304)     1.67e-64            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MADFFDGMKRRMDALIAERFGMKVNINGTDCIVVESDFLAELGPVEGNGKNVVVFSGNVIPRRGDRVVLRGSEFTVTRIRRFNGKPQLTLEENNGGKGA
1246085..1246651                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage morphogenesis protein; Lambda gpZ homolog; STL3553_c11900; phage(gi169257305)     1.52e-134           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MEVKGLKEAISVLKELDRGYVTRAKIRAINRVAKRVVSVSVRSAAALVVAGDNRRQGIPVRTVRRRARVRLARADKPFANIYVNCDPLTAIRLLSSPPSTPMRGRKGKPLRIGKYRFDRGFIAQAPNGWWQVFERSGAGRYPLNVVKIPVADALRHAFNTQVVLQMKTEMPKELKHEISYELRRFTKK
1246648..1247049                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail shaft stabilization protein; Lambda gpU homolog; STL3553_c11910; phage(gi169257306)     6.36e-94            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MTRHSAVRQAIIAALKKTDDGSTTFFDGRPVVVEEDELPAVAVYLSDAQYTGPEVDGDIWSAVLHVEVFLKATAPDSALDEQMENRVYPALGSVAGLGDIIRTMSAQGYNYQRDDEMAMWGSADLSYDITYSM
1247061..1247810                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage major tail protein; Lambda gpV homolog; STL3553_c11920; phage(gi169257307)     1.68e-179           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MTDTTIPNPLAPVKGANTTFWMYNSEGDPFASPLSDNNWLRLANVKDLQPGELTADAEDNNYLDDENADWKSTTQGQKSAGDTSVTLAWKPGEDVQKKLIQLFTTGQKRGFRIKYPNGTVDVFRGWVSSLGKTVQSKDEIARTVKITSVGRPYMAEEDAPEVVSVTGLTVEPTNATVKVGATTAVTFTVKPDNVTDKSLRIATSDPTTATVTQAENIATVKGVKAGTVKIIGMTTDGNFTAIADITVQA
1247856..1248254                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail assembly chaperone; Lambda gpG homolog; STL3553_c11930; phage(gi169257308)     1.13e-91            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MFLKKETFTRGDASVALFELSGLQRIEYLEFIQKRTAKYDTDMDGTTEADKRVAYMQMALEINAWLVSRSLLNGDSSQDADTLYQSVQAKWSYEALDAGAESVLMLSGLSADKKDNASDSGNESEDMTPEKS
1248317..1248580                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail assembly chapterone - part of G+G' frameshift hybrid protein; Lambda gpT homolog; STL3553_c11940; phage(gi169257309)     8.51e-56            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MLDEMSSTELSEWADFFRENSFSDALLDAEFSTLKAQVFMLVTGKEIDAADFSLLTLPGAVQSMTEQDLLEVAVGIPGGVRFEPESR
1248561..1251647                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tape measure protein; minor tail protein; Lambda gpH homolog; STL3553_c11950; phage(gi169257310)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MSQKVGDIVINMDVDTAKVAAGLQTASNGLGKLVDSSDLVEKRIKRCMESSARSVAASAKSISAAMAQSQVATRTQSDAMAQLAREANEARERAVDLNQKLRAEAAQAAVVAQAQDAAAAAFYRQIDSVKQLSGGLQELQRIQAQVRQAKGRGDISQGDYLALVSEAAAKTRELTDAEALATQKKAQFIRRLKEQTAVQGLSRTELLRVKAAELGVSSAADVYIRKLDTATKSTHALGLKSAMARREIGVLIGELARGNFGALRGSGITLANRAGWIEQLMSPKGMMLGGLVGGVAAAVYGLGKAYYEGAKESEEFNKQLILTGSYAGKTTGKLNEMAKSLAGNGVTQHDAAGVLTQVVGSGAFTGQAVAMVSRTAARMQENVGQSVDETIRQFKRLQDDPVNAAKELDRALHFLTATQLEQIRVLGEQGRTADAAKIAMSAYSEEMNKRAGDVHDNLGWIEKAWNAVGDAAKWAWDRMLDIGREDTLDEKIATLQEKIARARKTPWTVSSSQTEYDQQQLNELQEQKRQKDLLDAKAQAERNYQKTQKRRNEQNAALNRDNETESLRHQREVARITAMQYADAAVRNAALERENERHKKAMARQKEKPKAYYNDEAGRLLLQYSQQQAQTEGLIAAAKLSTTEKMTEAHKQLLSFQQRIADLSGKKLTADEQSVLAHKDEIALALQKLDISQQDLQHQNAFNELKKKTLTLTSQLADEESRVRQQHALALATMGMGDQQRGRYEEHLKIQQHYQEQLEQLKRDSKAKGTYGSDEYRQAEQELQASLDRRLAEWADYNAKVDAAQGDWTQGASRALDNFLAQGGNVAGMTENVFTNAFNGMADSIANFAVTGKGSFRSLTVSILADLAKMEARIAASKLLGSVLGMFVFGASAGGSTPSGAYSSAALSVIPNADGGVYRSAGLSQYSGSIVNRPTFFAFARGAAVMGEAGPEAILPLRRGTDGKLGVVAAGSGGMAMFAPQYHIAISNTGPELTPQALKAVYDLGKKAAADFVQQQGRDGGRLSGAYR
1251644..1251976                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tip assembly protein; Lambda gpM homolog; STL3553_c11960; phage(gi169257311)     3.05e-77            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MMKTFHWKVDPDMGGDSEPQVSVVRFGDGYEQRRASGINNDLKKYSVTIRVDREDGPGLEGFLSQHNGVKAFLWTPPYGYRQIKVVCRKWSVKAGLLKTTFTATFEQVIS
1252075..1252572                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage virulence determinant; Lom homolog; STL3553_c11970; phage(gi169257312)     2.92e-113           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MKKIVVAVLVGLALGSIGVANAAGYKNTVSIGYAYTDLSGWLSGNANGANIKYNWEDLDSGFGAMGSVTYTSADVNNYGYKVGDADYTSLLVGPSYRFNDYLNAYVMIGAANGHIKDNWGNSDNKTAFAYGAGIQLNPVENIAVNASYEHTSFSTDADSDVKAGT
complement(1252689..1253222)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage virulence determinant; superoxide dismutase precursor; STL3553_c11980; phage(gi169257313)     6.02e-125           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MKYTILSLVAGALISCSAMAENTLTVKMNDALSSGTGENIGEITVSETPYGLLFTPHLNGLTPGIHGFHVHTNPSCMPGMKDGKEVPALMAGGHLDPEKTGKHLGPYNDKGHLGDLPGLVVNADGTATYPLLAPRLKSLSELKGHSLMIHKGGDNYSDKPAPLGGGGARFACGVIEK
1253312..1254007                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tip assembly protein; Lambda gpL homolog; STL3553_c11990; phage(gi169257314)     7.93e-174           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MQDIPQETLSETTKAEQSAKVDLWEFDLTAIGGERFFFCNEPNEKGEPLTWQGRQYEPYPIQVQDFEMNGKGASPRPNLVVANLFGLVTGMAEDLQSLVGASVVRHQVYSKFLDAVNFSNGNPDADPEQEAVARYNVEQLSELDSSTATIILASPAETDGSVVPGRTMLADSCPWDYRDENCGYDGPPVADEFDKPTSDPKKDKCSHCMKGCEMRNNLVNAGFFASINKLS
1254017..1254754                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tip assembly protein; Lambda gpK homolog; STL3553_c12000; phage(gi169257315)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MINDDILAHARQCAPAESCGYVVRTAQGERYFPCENLSAEPTMYFRISPEDYLNARNRGDIVALVHSHPDGKPCLSSADRTLQIQSGLDWWLVCDNRIHKFRCVPHLTGRQFEHGVTDCYTLFRDAYHLAGIDMPDFDREDDWWSQGKSLYLDHLEAAGFYRVNPEDAQPGDVLICCFGSPTPNHAAIYCGNGELLHHIPEQLSKREGYNDKWQRRTHSIWRHRQWCESAFTGIYNDLESASASA
1254652..1255356                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tip assembly protein; Lambda gpI homolog; STL3553_c12010; phage(gi169257316)     2.31e-170           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MATTDTLNMAAPAMVRICLYGDLQRFGKRISLSIKTAAEGIHALAIQLPGFRQRMNEGWYQVRIAGSDMAPDTLTARLNESLPPGAVVHIVPRMAGAKNGIWQVVAGAALIGASFIPGLNAVAAAVLFSAGTSMALGGVAQMLTPVPKTPTVGQADNGKQNTYFSSLENMVAQGNPVPVLYGEMKIGSRVISQMMSTRDESTSGKVVVIGSPLQANTTSRQDGGITRPSVVIRQ
1255428..1258778                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail fiber (host specificity) protein; Lambda gp J homolog; STL3553_c12020; phage(gi169257317)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MSKGGGKGHTPREAKDDLKSTQQLSVIDALSEGPIVGPVNGLQSVLINNTPVVDADGNSNIHGVTVVYQVGETPQAPLEGFEASGAETVLGVEVKHDNPVTRTVVSENVDRLRFTFGVQMLQETTDKGDRNPSSVNLLIQFQRSGIWNTEFDITINGKITTQYLASVVADNLPPRPFSVRMVRVTPDSTTDRLQNKTLWSSYTEIIDIRQGYPGTAVAGLLVDAEQFGSQQVTRNYHLRGRIFQVPSNYDPDTRTYTGLWDGAFKPAYTNNPAWCTMDKLTHPRYGLGRRIGGADVDKWALYAIAQYCDQPVPDGFGGTEPRMTLNAYITTQRKAYDVLADFCSVMRCMPVWNGRKMTFIQDRPSDKAWTYTNGNVVGGRFKYSFSALKDRHNAVEVRYTDPLNGWQTSTELVEDHASQARYGRNLLKMDAFGCTSRGQAHRTGLWVMMTELLETQTVDFSVGAEGLRHTPGDIIEVCDNDYAGASVGGRITDLDISTRTLTLDREITLPESGATTLNIVGPDGKPFSTEIQSQPAPDRVVTKVLPETVQPYSIWGLKLPSLKRRLFRCVRIKENDDGTYAITALQHVPEKESIVDNGAHFDPLPGTTNSIIPPAVQHLTVSTDNDSTLYQAKAKWGTPRVVKDVRFVVRLTTGSGNEGDPVRLVTTATTSETEYAFHELPLGDYTLTVRAINGYGQQGEPASVAFSIQAPEAPSTIEMTPGYFQITVTPHQTVYDASVQYEFWYSATQLATAADIQSKAQYLGVGSFWIKDGLKPLHDAWFYVRSVNLAGKSVFAEASGRPGDDAKGYLDFFKGLITETYLGTELLKKIDLTENNASKLQQFSKEWQDANDKWSATWGVKIEQTKDGKYYVAGLGLSMEDTPDGKISQFLVAADRIAYINPANGNETPGFVMQGDQIIMNEAFLKYLSAPTITSGGNPPAFSLTPDGKLTAKNADISGHINAVSGSFTGEINATSGKFSGVIEAREFVGDICGSKVMQGVSIRATNDERSTSTRYTDSATYQIGKTITVMANCERNGGTGAITVTININGQVKTAEVMPYTAGIPAMYQTVVFSVYTTSPVVDISVSLRVRGQYTTSASVWPLVMVSRSGSNFTN
1258817..1259059                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; STL3553_c12030; phage(gi169257319)     7.64e-54            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MTMSRVISLAAGLSLSVLFSTAAVADNGRGSGNSNIENQTRIYTGTDRGQKQHREAKGKTITRSVQCSLPAYLRDPDNQC
1259113..1261551                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber protein; Lambda gpStf (gpN) homolog; STL3553_c12040; phage(gi169257320)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MPVLISGVLKDGTGTPVQNCTIQLKACRTSTTVVVNTVASENPDDAGRYSMDVEQGQYTVTLLVDGYPPSHAGVITVYDDSKPGTLNDFLGAMTEDDVRPEALRRFEAMVEEVARQASEASRNATAAGQASEQAQTSAGQASESATAAVNAAGAAEASATQAASSAASAESSAGTATTKAGEASASAASADTARTAAAASAAAAKTSEANADASRTAAGDSAAAAAASATAAQTSAARAGASETAAKTSETQAASSAGDAGASATAAAASEKAAAASAAAAKTSETNAATSASTAAASATAASSSASEASTHAAASDTSASLAAQSSTAAGAAATRAEDAAKRAEDIADVISLEDASLTKKGIVKLSSATDSDSEALAATPKAVHAVMDEVQTKAPLDSPALTGTPTAPTPETAAAGIEIATAAFVAAKVAQLVGSAPETLDTLKELADALGNDPNFATTVLNKLAGKQPLDDTLTALSGKSVDGLIEYVGLRETINHAADALLKSQNGGDIPEKPLFVQNIGALPASGTAVAANRLASRGALPALTGATRGSDSGLIMGEVYNNGYPTQYGNILRLTGTGDGEILIGWSGTNGAPAPAYIRSHRDTADAEWSEWAMLYTSLNPPPNSYPVGAAIAWPSDATPAGYALMQGQSFDKSAYPLLAIAYPSGIIPDMRGWTIKGKPISGRAVLSQEMDGNKSHSHSARAQDTDLGTKSTSSFDYGTKSTNTTGNHTHQFGGYINSYWGDSNHTSFQPGGGAWTQAAGDHAHTVYIGGHEHTMYIGPHGHVVIVDADGNAETTVKNIAFNYIVRLA
1261551..1262132                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber assembly protein; Lambda gpTfa analog; STL3553_c12050; phage(gi169257321)     8.40e-143           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MTFKMSEQAQTIKIFNLRSDTNEFIGAGDAYIPPHTGLPANCTDIAPPDIPASHIAIFDAETQTWSLHEDHRGEMVYDTTTGNQVYISAPGPLPENVTSVSPGGEYQKWDGKAKVWVKDEAAEKAAQLRQAEETKSRLLQMASEKIAPLQDAVDLGIATDDEKARLDEWKKYRVLVNRMDTAAPDWPERPASQ
1262608..1263576                   PHAGE_Phage_Gifsy_2_NC_010393: prophage virulence determinant; secreted effector protein; STL3553_c12060; phage(gi169257322)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MPFHIGSGCLPAIISNRRIYRIAWSDTPPEMSSWEKMKEFFCSTHQAEALECIWTICHPPAGTTREDVVSRFELLRTLAYDGWEENIHSGLHGENYFCILDEDSQEILSVTLDDVGNYTVNCQGYSETHHLTMATEPGVERTDITYNLTSDIDAAAYLEELKQNPIINNKIMNPVGQCESLMTPVSNFMNEKGFDNIRYRGIFIWDKPTEEIPTNHFAVVGNKEGKDYVFDVSAHQFENRGMSNLNGPLILSADEWVCKYRMATRRKLIYYTDFSNSSIAANAYDALPRELESESMAGKVFVTSPRWFNTFKKQKYSLIGKM
1263844..1264092                   PHAGE_Stx2_c_1717_NC_011357: transposase; STL3553_c12070; phage(gi209447153)         2.03e-31            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MEIDNNICENALRCVALGRRNYLFFGSDSSGEAAAIIYSLLGTCKLNDVESEAWLRDVLWKISDWSSNRVHELLPWNLETVK
complement(1264224..1264850)       PHAGE_Pseudo_F116_NC_006552: hypothetical protein; STL3553_c12080; phage(gi56692976)     3.72e-36            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MCGRFAQAQTREEYLAYLADEADRNIAYDPQPIGRYNVAPGTKVLLLSERDEQLHLDPVIWGYAPGWWDKAPLINARVATAASSRMFKPLWQHGRAICFADRWFEWKKEGDKKQPYFIHRKDGKPIFMAAIGSTPFERGDEAEGFLIVTSAADKGLVDIHDRRPLALTPETARVWMRQFLEPHSKSITYRVIPALTRPMMRKDTNPCQ
1264832..1264981                   hypothetical protein; STL3553_c12090                                                 N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MQSVHTYETASRQAESIGQGENVARSGNDLQGIYTVIRNENLCIDEFRN
complement(1265203..1265889)       prophage encoded virulence factor; STL3553_c12100                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MLRHIQNSLGSVYRSNTATPQGQIIHHRNFQSQFDTTGNTLYNNCWVCSLNVIKSRDGNNYSALEDITSDNQAFNNILEGIDIIECENLLKEMNVQKIPESSLFTNIKEALQAEVFNSTVEDDFESFISYELQNHGPLMLIRPSLGSECLHAECIVGYDSEVKKVLIYDSMNTSPEWQSNIDVYDKLTLAFNDKYKNEDCSICGLYYDGVYEPKPLHSSSWKDWCTIL
complement(1266160..1266351)       PHAGE_Entero_mEp390_NC_019721: DinI-like family protein; STL3553_c12110; phage(gi428782688)     5.87e-34            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MFVELVYDKRNVEGLEGASEIILAELTKQVHQIFPDAEVRVKPMQANCLNSDTNKSDRENLNR
1266657..1266671                   attR                                                                                 N/A                 TTATAAAAATGTAGC

#### region 4 ####
2083452..2083820                   PHAGE_Entero_HK022_NC_002166: integrase; STL3553_c20470; phage(gi9634144)            6.28e-24            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MKIALPLSLNLPSMGLRLSTVIERCRLVSRSEYLISAGIRKNSPNGSIHPNSLTKKFVAARKLTGINFSENPPPFHEIRSLSGRLYKDAYGEGFAQKLLGHTSENTTKLYLDERDNKAYVML
2083955..2083977                   attL                                                                                 N/A                 AAAAAGAGACCGAATACGATTCC
complement(2084306..2084506)       putative product; STL3553_c20480                                                     N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MLSPRYTTRYEDLLQVKWQVYPDFHIPDVMEPQPHRMQERAAASWRSFDSASIEWLPVAADFTCSR
2085124..2086038                   inner membrane protein; STL3553_c20490                                               N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MRKVSISILFMLVSLTWGTTWLAMRIAVETIPPVFATGMRFMFAAPFLIIIAWLRKKTLLFPPGQRLFQFVICIFYFCIPFSLMIYGETYVNSGLAAIIFANMPVAVLIASVLFLNEKAKLMQIAGLTIAITALTGILLEETNTSTESHWQGITALISAVLIHAIIYTQCKKRSCTVSVITFNALPCLLAGLILSATGWFFERPQVSTFSVHSILATLYLGAFAGVFGILCYFALQQKANAFQASLVFLIFPLIAVSLEDYIYGYAISTHSMLLIIPLVIGIFLTLVARNLPVTSRCRDNSSQK
2086171..2086329                   putative inner membrane protein; STL3553_c20500                                      N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MFMFLPFLLALSVAMGAINRKDKVSYILWAVLLIVTILSFIHHMTNSLTLSF
2086339..2086953                   hypothetical protein; STL3553_c20510                                                 N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MKTHHHPTTFVHLINQVGLLGICVALVVAFYYQLVRHELPCPICLLQRAGLIIAGFGFLFNLCFGLRGIHYGMVIIGSILTGVMASRQICLHIMPGDTGYGSAFFGLHFYTWTLITSILIIIAVAVILAISSMNVAFRSLNINPDLFSIVGWVFLLLITANLISTVLECGGGECAANPVTYKLLSKQDIAFLKTGLLTRTVLRL
2087441..2087587                   hypothetical protein; STL3553_c20520                                                 N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MAHWVLKQWPQLALDAISQITFQMDNKHSSYPVCIGIVKPDVDHLHQG
complement(2088101..2088226)       arsenical pump membrane protein; STL3553_c20530                                      N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MFANADSELILTPIIIAVLLAPGFSKSTTLAILHFFFRREK
2088489..2088605                   PHAGE_Salmon_SEN34_NC_028699: putative tail assembly chaperone; STL3553_c20540; phage(gi966201445)     2.99e-06            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MWLAYKNEVKLIDITNTPDNVNWPVPPGERASHDLKST
complement(2089093..2089974)       PHAGE_Salmon_Fels_1_NC_010391: putative bacteriophage tail assembly protein; STL3553_c20550; phage(gi169257205)     1.04e-89            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MYIGPHGHVVIVDADGNAETFGLMDGGVDAAITAYFGSQLQERVQQNIIREYLGEQPVGTAFVIETGNSKHPWLVPAPTMRVPLIIDGTDAVYNATRAALLAIFQHNKSAGEDRKITSVALPAMGAGCGQVPPGQRRPANCTDIAPPDIPSSHIAVFDAETQTWSLQEDHRGETVYDTTTGNQVYISDLGPLPENVTSVSPGGGYKKWDSKAQVWMNDEAAEAAARLREAEGTKNRLLQIASEKIAPLQDAVDLDEATNKEKASLLAWRKYRVQVNRVDTLKPVWPEKPASSL
complement(2090129..2090392)       PHAGE_Salmon_Fels_1_NC_010391: bacteriophage terminase, small subunit; STL3553_c20560; phage(gi169257184)     1.02e-56            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MDGELKNLKCNISQLAAITGLHRQTVVSRLSGVPLALGSNEKNKLYLLTDVIRVLMETPVSQAAEHQDPNKMTPKERKNWFDSEKGR
2090447..2090635                   hypothetical protein; STL3553_c20570                                                 N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MNKKHTNHHLLKINYIKTESYNMMMMHEKSKMRQIPRRCRPVAGRPAGSTFLKCEQLSTTTT
2090700..2090867                   putative phage membrane protein; STL3553_c20580                                      N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MKNIITIIVAIIIVFYAGMWSQKFLMEDECLDSGGSYNENGICNIAGSHQDVPPK
2091020..2091139                   hypothetical protein; STL3553_c20590                                                 N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MSTYQFHLVKNLFLFIWFHLMICSHFFTAILQGEFQCLL
complement(2091124..2091657)       PROPHAGE_Salmon_LT2: phage-tail assembly-like protein; STL3553_c20600; phage(gi16765210)     1.40e-124           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MNLLSALLKRYWLQLVFILLMAGAFIAGNVWSDRGWQKKWADRDSAESSQEVNAQTAARIIEQGRVIARDEAVKDAQAQAAKSAATAAGLSATVSQLRTEAKKLATRLDAAKHTANLAAAVRSKTTNADARMLANMLGDIAEAAKHYAGIADERYRAGMTCERVYDSVRESNNYRRH
complement(2091711..2091941)       PHAGE_Salmon_Fels_1_NC_010391: putative bacteriophage endolysin; STL3553_c20610; phage(gi169257182)     5.24e-38            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MNGKKAFAPRSAKIRITGLENYTRCGVALKLDLVANPGQLELERHAARSAAWLFVTKGCLKYSGDLVRVTQIINGG
2091972..2092625                   PHAGE_Shigel_Stx_NC_029120: exodeoxyribonuclease VIII; STL3553_c20620; phage(gi985761253)     6.56e-27            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MPDNTPTTHEENAARLSQAGKCLRDIEAGRFQCDEEKQQPTGELADEPATPEAVEQDTTEHHPDPQPLENEPPVSQTEAGYQKIRAELHEARKNIPPKNPVDVGKQLAAARGEYVEDISDPNDPRWVHNNYSASNQGEKEEVVPEGKQPAAEPEAVTRNADGTFDVSALFLPPSNQTEKTEARTERDGETPKESNQQETAGDTGQEITTDGGSGTTS
2092685..2093539                   PHAGE_Entero_HK022_NC_002166: integrase; STL3553_c20630; phage(gi9634144)            1.45e-78            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MSAWIDRYEVLLQRRNLSVNTYKIRSNQLATVREKMGEIILAEVTTRHIAKFLESWITEGKNTMAGAMRSVLSDMFREAIVEGHIVKNPVEATRIPEIKVARERLQLETYNATRAAAEHMPAWFPLAMDLALVTGQRREDIVNMKFSDVFDNRLYVTQIKTGMKIAIPLSLTLRATGLRLGTVIDRCRLVSRTDFMISAGIRKNSPTGNIHPDGLTKTFVKARKASGVNFSNNPPTFHEIRSLAGRLYKNEHGEVFAQKLLGHTSENTTKLYLDERDNKAYVML
2093670..2093692                   attR                                                                                 N/A                 AAAAAGAGACCGAATACGATTCC
complement(2093913..2094266)       PHAGE_Salmon_SEN1_NC_029003: hypothetical protein; STL3553_c20640; phage(gi971764937)     9.60e-12            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MKKILLPALLLATSGVALAAPQVITVSRFEVGKDKWAFNREEVMLTCRPGQALYVINPSTLVQYPLNAIAEQQVAEGKTRAQPIAVIQIDNPAKPGEKMSLAPFIERAQKLCDPSNS
complement(2094283..2095158)       putative cation transporter; STL3553_c20650                                          N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MMLTFVWITLRFIHFASVMLVYGCALYGAWLAPASIRRLMTRRFLHLQQHAAAWSVISAAFMLAVQGGLMGGGWPDVFFVSVWGAVLQTRFGAVWIWQIILALVTLAVVVIAPVKMQRRLLILTVAQFILLAGVGHATMRDGVAGTLQQINHALHLLCAAAWFGGLLPVVYCMRMAQGRWRQHAISAMMRFSRYGHFFVAGVLLTGIGNTLFITGFTAIWQTTYGQLLLLKCALVVLMVAIALTNRYVLVPRMRQENPRTDLWFVRMTQIEWGVGGIVLAIVSLFATLEPF
complement(2095159..2095533)       putative cation resistance protein; STL3553_c20660                                   N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MASSAPSRRLALLLLASTFATPAAWAHAHLTHQYPAANAAVTASPQALTLNFSEGIEPGFSGATITGPQQELIKTRPAKRNEQDKTQLIIPLEQPLKSGAYTVDWHVVSVDGHKTKGKYTFSVK
2095671..2095901                   PHAGE_Pectob_ZF40_NC_019522: putative DNA polymerase; STL3553_c20670; phage(gi422936677)     8.51e-23            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MKTNLAQLEQAEMDKVNVDLAAAGVAFKERYNMPVVAEAVEREQPEHLRAWFRERLIAHRLASVSLSRLPYEPKVK
2096009..2096665                   conserved hypothetical protein; STL3553_c20680                                       N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MSSWKIAAAQYAPLNASPAEHVAHHLEYIELAARQQCELLVFPSLSLLGCDERNKSLPAPPDEALLQPLTHAADTHHMTIIVGMPVEHNCRFVKGIAIFAPWLTSPLMFHKSHGACIARQRSAINVVDEQPEGGDIDPSFTLFTTSQCLNEPELHASTSRLQRFSHKYALAVLMANACGSSALWNESGQLIVRADCGSLLLTGLRTTEGWQGDIIPLR
2096689..2097387                   PHAGE_Pseudo_H101_NC_029094: exodeoxyribonuclease X; STL3553_c20690; phage(gi985760125)     8.55e-19            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MLRIIDTETCGLQGGIVEIASVDVIDGNIVNPMSHLIRPDRPITPQAMAIHRITEAMVADKPWIEDVIPLYYGSEWYVAHNASFDRRVLPELPGEWICTMKLSRRLWPGIKYSNMALYKSRKLSVQTPPGLHHHRALYDCYITAALLIDIMRTTGWTAEEMVNITGRPALLTTFPFGKYRGKAVSEVAKRDPGYLRWLFNNLDNMSPELRLTLKHYLEDVQAGEQRSNGTPQ

#### region 5 ####
2204650..2204661                   attL                                                                                 N/A                 CTAAAATCTGGC
complement(2204842..2205054)       PHAGE_Lactoc_bIL312_NC_002671: Csp; STL3553_c21890; phage(gi13095918)                1.74e-21            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MTTKITGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNEFRTLNENQEVEFSVEQGPKGPSAVNVVAL
complement(2205301..2205420)       hypothetical protein; STL3553_c21900                                                 N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MRRMYPGLRHQKMWRVYCPAGVVRRHLFTPGFSRSDRHE
complement(2205509..2206777)       PHAGE_Salmon_vB_SosS_Oslo_NC_018279: error-prone lesion bypass DNA polymerase V; STL3553_c21910; phage(gi399528790)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MFALCDVNSFYASCETVFRPDLCGRPVVVLSNNDGCVIACSAEAKQLGIAPGEPYFKQKERFRRSGVVCFSSNYELYADMSNRVMTTLEEMVPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLKRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTDGVVDLSNIDRQRRLLALIPVEDVWGVGRRISKKLNALGIKTALDLSEQSTWIIRKHFNVVLERTVRELRGEPCLELEEFAPAKQEIVCSRSFGERVTDYEEMRQAVYSYAARAAEKLRGEHQYCRFISTFVKTSPFALNEPYYGNSAAVTLLTPTQDSRDIINAAVKCLDKIWRDGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRAGSAKLMEVLDHLNAKDGKGTLYFAGQGMSQQWAMKREMLSPRYTTRYSDLLRVK
complement(2206780..2207199)       PHAGE_Salmon_vB_SosS_Oslo_NC_018279: errror-prone repair protein UmuD; STL3553_c21920; phage(gi399528789)     2.45e-40            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MEFFRPTELREIIPLPFFSYLVPCGFPSPAADYIEQRIDLNELLVSHPSSTYFVKASGDSMIEAGISDGDLLVVDSSRNADHGDIVIAAIEGEFTVKRLQLRPTVQLIPMNGAYRPIPVGSEDTLDIFGVVTFIIKAVS
complement(2207326..2207487)       uncharacterized protein; STL3553_c21930                                              N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MGAGQKINCCEGNALARGDNLRCGTVDAVQKIWPPGWLKYAHMTIQPENLQNP
2207837..2207851                   attL                                                                                 N/A                 CGGTTTTCGAGACCG
complement(2208118..2208339)       PHAGE_Salmon_ST64B_NC_004313: DNA invertase pin protein; STL3553_c21940; phage(gi23505471)     2.83e-47            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MFLLYCRGTGEIGGRRPKLSPEQWAQAGRLIGAGIPRQQVAIIYDVGLSIHGLYWILLSANRKGVKKRDYRAN
2208552..2209559                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; STL3553_c21950; phage(gi23505470)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MFSRVRGFLSCQNYSHTATPAITLPSSGSANFAGVEYPLLPLDQHTPLLFQWFERNPSRFGENQIPIINTQQNPYLNNIINAAIIEKERTIGVLVDGNFSAGQKKALAKLEKQYENIKVIYNSDLDYSMYDKKLSDIYLENIAKIEAQPANVRDEYLLGEIKKSLNEVLKNNPEESLVSSHDKRLGHVRFDFYRNLFLLKGSNAFLEAGKHGCHHLQPGGGCIYLDADMLLTGKLGTLYLPDGIAVHVSRKGNSMSLENGIIAVNRSEHPALKKGLEIMHSKPYGDPYIDGVCGGLRHYFNCSIRHNYEEFCNFIEFKHEHIFMDTSSLTISSWR
complement(2209560..2209709)       PHAGE_Entero_PsP3_NC_005340: major tail sheath protein; STL3553_c21960; phage(gi41057373)     1.72e-09            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MSDFHHGTQVIQFNGGTRVTSTISIEIVSMVFTFSFAETLLAFISYVCK
complement(2209844..2210413)       PHAGE_Salmon_ST64B_NC_004313: Probable tail fiber assembly protein; STL3553_c21970; phage(gi23505469)     1.45e-138           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MKKYQNIKNFRLIDAPVNRDKTQAEINIGAYFLESDDGQDWYECQSLFSDDTAKIMYDHEGVIWGVVNKPVPQRGNTYSVSMLWPVNMSVAEIDAADCPDDCRGDGTWLYQDGKVVQRGYSPEELRKKAEAEKVRRLAEAESAIAPLARAVKLKIATDEEIKRLEAWELYSVMVNRVDTSAPDWPDIPR
complement(2210413..2211975)       PHAGE_Salmon_ST64B_NC_004313: tail protein; STL3553_c21980; phage(gi23505468)        0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MHRIDTPTAQKDKFGQGKNGFTNGDPATGRRATDLNSDMWDAVQEEVCTVIEAAGIPLSKGEHTQLHAAIGRLIDEQVKTRLEKNQNGADIPNKPLFLQNVGLGETINLAAGALQKSQNGGDIPDKKQFARTIGAVTSTTITLGESGWFKIATVVMPQATSTAVIKLYGGAGFNAGSPEQAAISELVLRAGNGSPVGITATLWRRSPSAANEVAWVNTSGDTYDIYINIGQYAYWLIAQYDYTGNANVTLHSTPEYSSVQPGNSTSGQTYTLFNSLMKPTAGDVEALSVNGGRLNGPLGIGTDNALGGNSIVFGDNDTGFKWHSDGVLGIYANNALVGYIDNSGLHMSVDVLTNGAVRAGNAKKLSLTSNNNSTMTATFNLWGDANRPTVIELDDDQGWHLYSQRNPDGSIVFTVNGDITANTLRAGGAIYQNNGDIFGSLWGNGWLSTWINNNLVLDVQLGAGTSVTTWNNAGSWPNTPGYVVTSVWKDYQGENIDGINYAPLQKRVGSQWYTVQGGTV
complement(2211962..2212549)       PHAGE_Salmon_ST64B_NC_004313: putative tail protein; STL3553_c21990; phage(gi23505467)     7.68e-145           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MALQDEYTQLLYHLLPEGPAWDGENPLIEGLAPSLNRVHQRADELMAEIDPARTTELIDRYEQLYGLPDSCAPEGVQTLQQRQQRLDAKANVAGGINERFYREQLDALGYTAATIEQFQNLDSTPDPEWGEFWRYYWRVNIPADANISWQTCTSTCDSAIRTWGDTVAECVIDKLCPSHTVVVFAYPEGKENAQN
complement(2213625..2214038)       PHAGE_Salmon_ST64B_NC_004313: putative tail protein; STL3553_c22020; phage(gi23505464)     3.87e-96            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MILYVNGIRKDATASLDFLTRAVVISLFTWRRAERDDRTPQPYGWWGDTWPAVQNDRIGSRLYLLKRRKLTNKTPQDAREYMQQALAWMTDDGVAARIDVTSERTGTDTLAAGVTIYQRDGVIHNITFDDIWSKLNG
complement(2214043..2214576)       PHAGE_Salmon_ST64B_NC_004313: putative base plate assembly protein; STL3553_c22030; phage(gi23505463)     2.39e-129           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MANHPLQNMITRAVITAIDTVRKCQTAGLKLIAGEKKENVEHLEPYGFTSAAQNGAEAVVLFPGGDRSHGVAVVVADRRFRLKGLARGEVALYDDQGQSVTLTRAGIVVNGGGKPVIFTNATKARFEMPIESTGDIRDNCDSSGKTMAEMRTTYNGHTHKENGDGGGITDKPGQPMS
complement(2214576..2215634)       PHAGE_Salmon_ST64B_NC_004313: Tail protein; STL3553_c22040; phage(gi23505462)        0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MNNTVFLRVNGRDWGGWTSVRISAGIDRIARDFNVSITRQWPGGEDVPPVKNGDSVEVLIGDDLVITGWVEALPLRYDAQTIMTGIVGRSKTADLIDCSASPAQHNGENLFLIASALARPFGVDVVDAGAPAAAVIEAQPEHGETVVDCLNRLLGQAQALAYDDERGRLVLGRPGSMKAATALVLGENILSCDTERSVRERFSSYLVTGQRPGTDDDFGEATIAAIRQSTGDAGVTRYRPHTIQQSGTATTDSCKSRCEFEARQRAAKTLETTYTVQGWRQGNGELWKPNQAVVVYDPLNGFDNETLVIAEVTYSQDNNGTLTEIRVGPADAYLPEPFRPKAKKKVSEEADF
complement(2215631..2216971)       PHAGE_Salmon_ST64B_NC_004313: tail/DNA circulation protein; STL3553_c22050; phage(gi23505461)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MAFFSSTGWRGRLRDASFRGVPFSVEDDESTFGRRVQVHEYPNRDKPWTEDLGRATRRLTINAYLVGDDYADRRDRLIGAIETAGPGTLVHPQYGEMQGSIDGQVRITHSSTEGRMCRVSFQFVESGELSFPVAGMATAKRLETSGGLFDDAIDSMFSTFSLSGISDFIQNDVIADAASMLGDVADAFRMVDSGVSAAMRLLQGDLSVILMPPGAASDFVNALQKAWRSGDRLRGSTSDLVTMIKTMSGITLDPGLSPRGTWPTDSGSAAKQKMQRNMIAAAIRTTAISTAVHAVTTLKQPRDVPGVRGVNQPAGTGRDSDIITVMHPALDGVQTVSNGSSPPNYEDLKAIRTALNAAIDQEQLRIRDDVLFQQISVMRTDLNRDISARLAQVERTALRTPDDVLPALVLAAAWYDDAGRESDILTRNPVPHPGFIPVEPLRVPVR
complement(2217005..2218933)       PHAGE_Salmon_ST64B_NC_004313: tail protein; STL3553_c22060; phage(gi23505460)        0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MADSFQLKAIITAVDQLSGPLKGMQRELKGFQKEMAGLAIGAAAAGTAVLGALALPVNAAIGFESKMADIRKVVDGLDDKKAFAQMSDDILTLSTQLPMAAEGIAEIVAAGGQAGIARGDLMQFANDAVKMGVAFDTTAEESGQMMAQWRTAFRLTQEDVVVLADKINYLGNTGPANAKKISDIVTRIGPLGGVAGVASGEIAAMGATIAGMGVESEIASTGIKNFMLSLTAGNSATKAQKQAMAFLKLNPRKLAEDMQKDSRGAMLKVLDSLAKVPKAKQAAVMNALFGKESLSAIAPLLTNLDLLRTNFDRVADAQEYGGSMQKEYASRAATTENQLVLLKNSVNAISVTLGDTFLPAINEAAEAVMPYLEQLRTFVRANPELVQSAAKFGAALLAVGVSIGSLSRAVKILNSVINLSPAKVAIAALVAGAMLIIENWDDVAPVIKAVWQEVDNVAQEMGGWETVIEGVGLVMAGSFTVRTIGALQQSVLLAGRLSGLLGKIGRMGAMTLTIGVAVSLFKELKDLEQGAKDAGMDAGAFAVQKLQTKERERGYNGFIPRLKELLGMDTPIPQGRYQPYVPLTRRSGVLERAVPPSTQRSELKVTFENAPQGMRVTDIPKSGNPLMNISHDVGYSPFRTSR
complement(2219018..2219344)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; STL3553_c22070; phage(gi23505501)     2.05e-73            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MIKELVLKKPIMAHNEKLHVLELREPSYDEIEAIGFPFTVSGDGGVRLDSSVALKYIPVLAGIPRSSAAQLAKLDIFKACMLILNFFTRSETEEDSESGSTTPHTSGE
complement(2219341..2219697)       PHAGE_Salmon_ST64B_NC_004313: Tail tube protein; STL3553_c22080; phage(gi23505459)     2.31e-83            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MGKIAGTTYFKIDGQQLSVTGGIEVPMNTKVRDDVIGLDGSVDYKETSRAPYTKVTAKVPKNFPVDKITSSDVMTITSELANGQVYVLSNAWLHGEANHNPEEGTVDLEFHGEEGFYQ
complement(2219697..2221193)       PHAGE_Salmon_ST64B_NC_004313: Tail Sheath protein; STL3553_c22090; phage(gi23505458)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MAISFNSIPSDTRVPLFYAEMDNSAANTARDSGASLLIGHASNDASIAVNSLVLVSSVDYARQICGAGSQLARMVGAYRKTDPFGELYVIAVPESTGAAATVALTVTGEATETGTVNVYTGRTRVQAPVTSGDDAAAVAVSIKDAVNANPDLPFTATSEAGVVTLTARHKGLYGNEIPVTLNYYGFGGGEVLPAGVNITVASGVKGAGAPALNDAVAAMGDEPFDYIGLPFNDTASVNSMATEMNDSSGRWSYVRQLYGHVYTAKTGTLSELVAAGDQFNLQHITLAGYEKDTQTPADELAASRTARAAVFIRNDPARPTQTGELVDMLPAPKGKRFTTTEQQTLLSHGVATAYVESGVLRIQRDITTYRKNAYGVADNSYLDSETLHTSAYVLRRLKSVITSKYGRHKLANDGTRFGSGQAIVTPAVIRGELGSTYRQMEREGIVENFDLFQQHLIVERNANDSNRLDVLFPPDYVNQLRVFAVLNQFRLQYSEEAA
complement(2221183..2221347)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; STL3553_c22100; phage(gi23505457)     1.15e-31            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MFVKPAKGRSVPDPARGDLLPEGGRNVDENNYWLRREAAGDVRRMNKKVKTNGD
complement(2221351..2221911)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; STL3553_c22110; phage(gi23505456)     1.38e-136           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MKLTPIIAALRSRCPRFENRVGGAAQFKAIPEAGKLRLPAAYVVPAEDVTGEQKSQTDYWQDLTEGFSVIVVLSNERDEKGQWASYDAVHDVRQEIWKALLGWEPDSQVHEIQYAGGMLLDLNRHELYYQFDFTVKYEITETDTRQQDDLDGLPDLKTLSIDVDFIEPGTGPDGDIEHHTEITFQE
complement(2221908..2222420)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; STL3553_c22120; phage(gi23505455)     4.71e-121           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MPQKAYLHVDFVQPEELVFNRARMRRAFVKIGQVHMRDARRLVMKRGRSKPGENPSYRTGQLARSIGYYVPRASKKRPGLMVKIAPNQKNGEGNRHINGAFYPAFLFYGVRRGAKRKKGHHRGASGGSGWRVEPRNNYMTEVLDKRRSWTRYVLSRELRKSLRPQRRKKK
complement(2222392..2222796)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; STL3553_c22130; phage(gi23505454)     9.25e-96            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MKIRQAQTSATYLLPDPGELDQRIVIRRRVDVPADDFGVTPTYPEQIRTWAKKAQPGAAAYQGSVQIENRVTHYFTIRFRRGITADHEVLHDDISYRVKRVRDLNGKRRFLLIECEALGTDNGSDYAAESIFTR
complement(2222793..2223116)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; STL3553_c22140; phage(gi23505453)     2.93e-73            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MLLSVEEIKAQLRLDEDFEADERYLQLLARAVQKRTETYLNRKLYAPDETIPDSDPDGLLLQDDIRLGMLMLISHFYENRSSVTEVEKLDMPQSFGWLVGPYRYFPQ
complement(2223119..2223319)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; STL3553_c22150; phage(gi23505452)     9.95e-42            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MILKQDLKWSPDGLRVEIIRAGEHDDRILPARVQEIALQTGLAECETSAKSNKAVKEKKSTTSQEG
complement(2223370..2224575)       PHAGE_Salmon_ST64B_NC_004313: Major capsid protein precursor; STL3553_c22160; phage(gi23505451)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MAVDIKDVEQVAQELQQKFDDFKAKNDKRVEAIEQEKGKLAGQVETLNGKLSELENLKSDLEKELLELKRPARGAQNKVAAEHKDAFVGFLRKGREDGLRDLERKALQVGTDEDGGYAVPEELDRSILSLLKDEVVMRQEATVITVGGSDYKKLVNLGGTASGWVGETDTRSQTATSRLGLIEPFMGEIYGNPQATQKMLDDAFFNVEAWINSELATEFAEQEEIAFTTGDGTKKPKGFLAYESTEESDKARAFGKLQHIVSGEATAVTADAIIKLIYTLRKAHRTGAKFMMNNNSLFAIRLLKDTEGNYLWRPGLELGQPSSLAGYGIAENEQMPDIAADAKAIAFGNFKRGYTIVDRIGTRILRDPYTNKPFVGFYTTKRTGGMLVDSQAIKLLKIAAA
complement(2224590..2225240)       PHAGE_Salmon_ST64B_NC_004313: Pro-head protease; STL3553_c22170; phage(gi23505450)     3.83e-156           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MQTKQRLDVPLSLKSVSDSGEFEGYGSVFGVKDSHDDVVMSGAFAASLREWSDRKALPALLWQHRMDEPIGVYTEMKEDDVGLYVKGRLLIDDDPLAKRAHAHMKAGSLTGLSIGYVLKDWEYDRSKEAFLLKEIDLWEVSLVTFPSNDEARISDVKNALARGEIPEQKKIERVLRDVGLSRTQAKAFMAGGYGALSLRDAEDVGSALNVLKNLNF
complement(2225218..2226459)       PHAGE_Salmon_ST64B_NC_004313: Portal Protein; STL3553_c22180; phage(gi23505449)      0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MFFSGLFQRKSDAPVTTPAELADAIGLSYDTYTGKQISSQRAMRLTAVFSCVRVLAESVGMLPCNLYHLNGSLKQRATGERLHKLISTHPNGYMTPQEFWELVVTCLCLRGNFYAYKVKAFGEVAELLPVDPGCVVPKLNSSWEPVYQVTFPDGSTDVLSQEDIWHVRTLTLDGLVGLNPIAYAREAISLAAATEEHGARLFSNGAVTSGVLRTEQTLSDQAYERLKKDFEERHTGLGNAHRPMILEMGLDWKSMALNAEDSQFLETRKFQLEEICRLFRVPLHMVQNTDRATFNNIEELGLGFINYSLVPYLTRIEQRINTGLVRKSKQGVFYAKFNAGALLRGDMKSRFEAYATGINWGIYSPNDCRDLEDMNPRPGGDVYLTPMNMTTKPSDGSKAGKQKDNANADETTS
complement(2226459..2226641)       PHAGE_Salmon_ST64B_NC_004313: putative integral membrane protein; STL3553_c22190; phage(gi23505448)     4.87e-35            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MIMLILAPLVGVLGALLLAYGAWLIYPPAGFVVAGALCMFWSWLVARYLDRTQQSVGGGK
complement(2226653..2228386)       PHAGE_Salmon_ST64B_NC_004313: Terminase large subunit; STL3553_c22200; phage(gi23505447)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MSRKSYPNVNAANQYARNVVRGKITACQYVIQACQRHIDDMAAEKSKRFRYRFDKDMAEKAAKFIQLLPHTKGEWAFKRMLITLEPWQLFIVCCAFGWVQKGTKLRRFREVYTEIPRKNGKSAISAGVALYCFTCDNEFGAEVYSGATTEKQAWEVFRPARLMCKRTPLLVEAFGIEVNASNLNRPEDGARFEPLIGNPGDGASPHCAIVDEYHEHPTDALYTTMLTGMGARRQPLMWAITTAGYNIEGPCYDKRREVIEMLNGSVPNNELFGVIYTVDEGDDWTDPKVLEKANPNIGVSVYRDFLLSQQQRAINNARHAGVFKTKHLNVWVAARTAFFNLVSWQNCEDKTLTLELFEGQPCVLAFDLARKLDMNSMARLFTREIDGKTHFYSVAPRFWVPYDTVYSVEKNEDRRTAERFQKWVEMGFLTVTDGAEVDYRYILEEAKAANKLNPVSESPIDPFGATGLSHDLADENLNPVTIIQNYTNMSDPMKELEAAIESGRFHHDGNPIMTWCIGNVVGKTIPGNDDVVKPIKEQAENKIDGAVALIMAVGRAMLYEKEDTLSDHIESYGIRSL
complement(2228383..2228877)       PHAGE_Salmon_ST64B_NC_004313: terminase small subunit; STL3553_c22210; phage(gi23505446)     1.33e-117           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MAGTAGRSGRRPKPTARKELAGNPGKRALNKEEPVFTPINGVSPPDWFNEEDMPLASVMWELTTKELCGQGLLCVTDLAVLERWCVAYEFWRRAVKNIAKEGNTITGAMGGKIKNPELTAKKEQESEMSSTGSMLGLDPSSRQRLIGLAGQKKTSNPFLKMINS
complement(2229003..2229152)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; STL3553_c22220; phage(gi23505500)     8.89e-29            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MCLRSGVVREAKTVDHIIPKAHGGTDTDSNLQSLCWPCHKAKTARERLK
complement(2229936..2230355)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; STL3553_c22230; phage(gi23505498)     6.61e-98            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MKYPTVIVNGVSVRVDEDGRYNLNDLHAAAVANGEATESQRPSNFLRSAQIKRFISALKAKAQKRALKEIQPLKVIKGGVDSGVWGVELLAIRYAAWIKPEFEIEVYEVFKTVVRLGVGAMSRLNRIDHIINTETKAIS
complement(2230568..2231053)       PHAGE_Salmon_ST64B_NC_004313: lysis protein; STL3553_c22240; phage(gi23505497)       6.38e-114           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MNLLPVLLKKYWLQLSVTLLIAVLAWTTDHYRDNAIQYKSQRDTASHSLTLANETISDMEVRQRDVAALDARYTKELADAKAENDALRDDVAAGRRRLLVNATCPAVSTGKSTSAARVDNAARPRLADSAQRDYFTLKERVTTMQKQLEGAQDYIRTQCLK
complement(2231050..2231664)       PHAGE_Salmon_ST64B_NC_004313: lytic enzyme (putative glycohydrolase); STL3553_c22250; phage(gi23505496)     1.43e-151           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MNESQFQQAAGISAGLSARWYPHITAAMSEFGITAPLDQAMFIAQVGHESAGFTSLVESFNYSVDGLMKTFGKRLTPYQCEMLGRVDGKQVAHQPQIANLVYGGRMGNKDAGDGWKYRGRGLIQITGLENYTRCGVALKLDLVANPGQLELDRHAARSAAWFFVTRGCLKYSGDLVRVTQIINGGQNGIGDRRERFEKAKSVLV
complement(2231667..2232011)       PHAGE_Salmon_ST64B_NC_004313: lysis protein (holin); STL3553_c22260; phage(gi23505495)     1.43e-56            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MKMHFDPHSWDSWIELFQSWWRGDVPIGGVVMAIVVAFFRMVYNGSSWKETLFEGLLCGSLTLTAVSALDYFDVPKSLTIAIGGTIGFIGVKKISTIISTYFSNRFGGGNPPQV
2232052..2232180                   hypothetical protein; STL3553_c22270                                                 N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MSGKRKGRQTAACEWLPRGGGVFPGLILLIRQKHNVKRGKNE
complement(2232537..2232896)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; STL3553_c22280; phage(gi23505494)     4.29e-83            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MLGKAAPRWQRRKASQLKLRNLAFAGFLRFWEPVMQDGKQQPYFFNPGMTPEQLEDWLGQQKLHLTYYNQLVNEKAALEERLNEISAEIERMSAGGFKGKLSFLWDPSPLPRNRQQNND
complement(2232927..2233550)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; STL3553_c22290; phage(gi23505493)     8.69e-153           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MTPRQRRQHRNAIEKAAAAPRKSWLGKFRPLTSVQSAWVKSLLSVWGECYGGRTSEEAMLDCCGFWSCLQDEEWTDNEAKRITETIKGLRKIGYKGEALLSMARQILWPKQSIADLLNKEMRIEESDFVERCILSALSKDDPVFVVGIDFYARRKRVSDIGRYLQEIAPWLTRKQAEDRVRWCVNHFNCAVFLAFRDAMRKQNEKIS
complement(2233561..2234556)       PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; STL3553_c22300; phage(gi100127)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MIVRALLTPEIAPRMGVVLFRPGAELMPLFMQGRVLLEPEPEQYSSFACGAVPAVSQPLADDPAVRDVFRNESVIYRAGGLDSLESWLLRGNGCQWPHSDWHSEQMTTMRHAPGAIRLCWHCDNLLREQFTERLKSIAVENTTKWVLSVVCRDLGFDDMHAVTLPELCWWMVRNDLAEVLPESAARKALRMPKAIVQSATRESEIVPSVPATSIVQDKAKKVLALRVDPESPESFMLRPKRRRWVNERYTRWVKSQPCACCGKQADDPHHLIGHGQGGMGTKAHDLFVLPLCRTHHNELHADTVAFEEKYGSQLELIFRFIDRALAIGVLS
complement(2234558..2235418)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; STL3553_c22310; phage(gi23505490)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MNNLMVIDGIEVRRDVHGRYCLNDLHRAAGGEQKYRPKYWLDNKQTRELIEQLFTEGGIPPSEQNQSVSFFQGGSDTQNLGIAPVNTVRGGAEQGTYVCKELVFAYAMWISPSFHLKVIRTFDRITSAPQTSSGMAADKMQAGVILLGFMRKELNLSNSSVLGACQKLQEAVGLPNLAPQYAIDAPAGALDGSSRPTLALSALLKQHGIRMTANQAYQQLAKLGVVEHRERYSRSAINGIKKFWSLTAKGCMFGKNITSPANPRETQPHFFESKFPELLKLLDTVH
complement(2235821..2236714)       PHAGE_Salmon_ST64B_NC_004313: putative DNA methyltransferase; STL3553_c22320; phage(gi23505488)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MSNKYCQALAELRNKSAHELKEVGDQWRTPDLLFWGINAMFGPLTLDLFADDDNAKCPVWYTADDNALVQDWAEMLESIGGAAFGNPPYSRSQYHEKQAITGMTHIMDHTMEMREKGGRYVFLVKAATSETWWPEDADHIMFIRGRIGFDLPVWFVPADDKQKTTGAFFAGAIAIFDKSWRGERFSYISRTELEEKGKAFMSLVEFAAGKVQPPATTAPEQEEPIIAPAVLPYVDSRIWPLEVGLVFNQVEGADSLDASQQNKLKANINQLWLERMPTSEIITTAGGLVSSMRREVA
complement(2237198..2238016)       PHAGE_Salmon_ST64B_NC_004313: putative replication protein; STL3553_c22330; phage(gi23505486)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MSMELMVKAMKIRVGNPLRKLVLIKLADNASDQGECWPSYQHIADQCEISKRSVMNHIAALCESGLVKKVTRKGEKGNSSNIYLLHLDGAGDSLGGSANNSLPGAANSLGSAGVAPGGSEGDSPRTSHSFEPVKEPVNESKTIGASAYASSSVCFARQEYSPEFEQAWLAYPKRAGGNSKSAAYKAWKARLKEGVNAETMLEGVKRYAGWVSATGNSGTQFVKQATTFFGPDRHFGELWAVPAAPSPGREDPMFKSSYGNVDYSQIPTGFRG
complement(2238234..2239391)       PHAGE_Salmon_ST64B_NC_004313: putative antirepressor; STL3553_c22340; phage(gi23505485)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MNSLTVNNRLSQQPGMYEYRPLRHECRLPNSLVVRNHREHSLTVGDESCRNLTAGFGMEGDFMSMSFAGNQKLSALSICARAIRMSVLALCGNSGVILLSVKRQEHIDSAIPGRYTVQAPHKAGAGRGNPEFNIEHNRAHAVFSCHEHCYAQIMVGRAGPVSAGPGSMLTGISTPVRLTTYKVVESLGGEFIEFNIEAATMATVPTLAQPEIRIINGQAVTSSLAVADYFIKRHADVIRKIESLECSTLFRQRNFAFTSISINQPNGGTRKLPCYQITRDGFAFLAMGFTGKRAAQFKEAYINAFNQMEKQLSIPSVLSDAAHNASVLYSYISSIHQVWLQQLYPMLEKAESPLAVSLYDRINDAVALASLINMTLNRSEVRGRK
complement(2239388..2239942)       PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; STL3553_c22350; phage(gi100118)     4.84e-135           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MGHEPEWKVEKQPRWLVAAIKKTISSLHGGYEEAAEWLDVTKDALFNRLRTGGDQIFPIGWALVLQRAGGTYHLAHSVARASGGVFVPLADMEEVDNADINQRLLEAIEQITSYSQQIRVAIEDGVIEPHEKAVIDEELYQAIAKLQQHSTLVYRVFCAPEKGDARECAAPGAVASNFMEKTNA
complement(2239971..2240195)       PHAGE_Salmon_ST64B_NC_004313: DNA binding protein; STL3553_c22360; phage(gi23505483)     5.22e-49            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MQSPLRKLRKSHGYTLQHVAKGVQVDPATLSRVERCEQAPSTELAERLAQFYAGEISEMQILYPNRYQLSDSAI
2240293..2240988                   PHAGE_Salmon_ST64B_NC_004313: regulatory protein; STL3553_c22370; phage(gi23505482)     4.81e-170           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MNIGNRVRQLRRAKNMKIAELAEAIGVDAANISRLETGKQKQFTEQTLSRLADCLGVDIAELFTSDPKGNTVCKHSDMRKDSANVKDLFRIEILDVSASAGNGLIQGGDVIDVIHAIEYNKDKALAMFGGRPAAELKVINVRGDSMAPTIEPGDLIFVDISINQFDGDGIYVFGFDDKIYVKRLQMIPDKLLVISDNTNYREWSITKDNECRFGVFGKVLISQTQSLKRHN
2241584..2242174                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; STL3553_c22380; phage(gi23505481)     2.48e-85            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MLCEVLSASGSSNNRRKATVFCRDADLFTQQKRVSPRDGLITQSTRKAVTAGALFCFVEKPTGGGNRHLEGLTMNDDRMTVVPDFLGELDAGVFMNKIAAALNTVGLGVLNNGNKGKVVLTFDFERMGNSVEEKRVKIKHKLQYSTPTPRGKASEEDTTETPMWVNKGGKLTILQEDQGQLFSIKGTTDGKLKAAQ
2242232..2243059                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; STL3553_c22390; phage(gi23505480)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MSQLDSGTFQQVKDLVLSGYHLNDIQGLACPTALLPAGTGVESLERFALERFRFRGAMTTTSIEDFVRYSKGYASTTEKARCFIDADHMTARSVFNIGTLDNPGHADNVASVTLKQTAPFRALLQINGERLKQKQIAEWLEDWSDYLLAFDSDGKTMQISQAAQAVRRITIQQATQQDHEDGDFSGKKSLMQSIEASSKDVMPVAFEFKCVPYEGLGERAFSLRNSLLTGDEPRFVLRIVQLEAQEEAIANEFRDLLISKFDGESVETFIGNFKA
2243196..2243735                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; STL3553_c22400; phage(gi23505479)     2.57e-129           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MSFIQTLSGKQFDYLSATIDDIDIEDIAVALSNICRFSGHLPEFYSVAQHSVLCSQLVSPEFAFEALMHDAAEAYCQDIPAPLKALLPDYREIEKRTDQLIRFKFGLPLEEASVVKYADLTMLATERRDLDIDDSIPWVILEGIPPTDLFEIYPLRPGQAFGLFMARFNELMELRQCAA
2243806..2244036                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; STL3553_c22410; phage(gi23505478)     1.32e-49            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MKLEMYTLDGSVIVDSNLVTQFYPDYKSGGELTVIETISATGETFTVRVKHSFLQVTSALATAWSVDEKKAEGAAQ
2244033..2244548                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; STL3553_c22420; phage(gi23505477)     1.40e-126           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MSNRIRNAQVFDARTGEYPVYMYIHWIIGGELDFDANYQRGYVWGHEEQQAFLNAVISGFPIGSVALAKAPDWCSRELPYIEVVDGKQRLTTLKKFITNEIPIILADGPLYWRDMTRAEQLVFGRRPLPAVVLDEVTYKDRLAYFMVVNFTGVPQSEEHKRHVMQLMEAAQ
2244545..2245162                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; STL3553_c22430; phage(gi23505476)     1.91e-152           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MSNIDKQALRERYSPKPAPECHICGAEMTIQRMSASRITYGCTGATYDDKGCHYAEGRSIADDHYEQSRVTVVDVSDPNVLALLDELDSANGYVSAYEAEKWHYHGLAESEGERADRAEKRVAELEYIATDYGVKFQKTQDALKHQALLHKSQMEAAEKQVEELTMWVKRLANSLRNTKPNSKLYGAAMDYLSRKGLISVEDVLR
2245159..2245992                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; STL3553_c22440; phage(gi23505475)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MTTITKEWLQQTIAEFENTRDDIPFGLDDDDAKILLVLKRALASLDAEPVRYLNKFSGTCVTLEQQSNAADDVAVYIPLYTAPPAPVVPEEAYSDDCPDLYASQPEAWAAGWNACRAALLHGAEPVSQTYELPQTQFEQVADLYEMQFDDGRTCAFHTDGAKAAQWLLACDGNKVQEYVRLERYHEALIGNSPVIPDDWVMVPKKLTAENGAKSLLSGEFLETTFISFPECLADEECESCDGSGRIKIEVPVRWTTIKAIWNKGVEHFRSSTATGDN
2245996..2246565                   PHAGE_Salmon_ST64B_NC_004313: Endodeoxyribonuclease; STL3553_c22450; phage(gi23505474)     1.05e-140           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MNNLMIDLETMGKKPNAPVVSIGAVFFDPQSGEIGPEFYTAVSLESAMEQGAVPDGDTILWWLRQSPEARAAICADAVSVTTALIEFNDFITCHADDLKYLKVWGNGANFDNVILRGAFERASLPCLWNYRNDHDVRTMVTLGRAIGFDPKRDMPFEGDMHNALADARHQAKYVSAIWQKLIPPTSNNI
2246605..2246832                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; STL3553_c22460; phage(gi23505473)     4.11e-51            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MSDRFLTEEELEDATGASQKSLQKEVLTLNGIYFIERRDGSIRTTWYHINHPVSRLLPPAGYQPVPGMNFDAIES
2246867..2247823                   PHAGE_Salmon_ST64B_NC_004313: Integrase protein; STL3553_c22470; phage(gi23505472)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MPKGVFFRPSGYYWKPGGSTENIAPADATKAEVWVAYEKKVEGRKNRITFTQLWRKFLASADYADLAPRTQKDYLAHEKYILAVFGDAEAKAIKPEHIRRYMDARGQKSRVQANHEHSSMSRVFRWSYQRGYVPGNPCVGVDKFPKPQRDRYITDEEYRAIYNNATPAVRAAMEIAYLCAARFSDVLKMNWNQILEKGIFIQQGKTGVKQIKSWTDRLRDAVEICREWGEEGPVIRTMYGERYSYKGFNEAWRKARKAAGDDLGRPLDCTFHDLKAKGISDYEGTAKDKQKYSGHKTESQVLVYDRKVKMSPTLDRKR
complement(2247940..2248026)       tRNA                                                                                 N/A                 GGAGAGATGCCGGAGCGGCTGAACGGACCGGTCTCGAAAACCGTTGCGGGGGTAACTCCGCCGAGGGTTCGAATCCCTCTCTCTCCG
2247984..2247998                   attR                                                                                 N/A                 CGGTTTTCGAGACCG
2248115..2248912                   conserved hypothetical protein; STL3553_c22480                                       N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MIKWPWKAQEITQNEDWPWDDALAIPLLVNLTAQEQARLIALAERFLQQKRLVALQGFELDSLKSARIALIFCLPILELGIEWLDGFHEVLIYPAPFVVDDEWEDDIGLVHSQRVVQSGQSWQQGPIILNWLDIQDSFDASGFNLIIHEVAHKLDMRNGDRASGIPFIPLRDVAGWEHDLHAAMNNIQDEIDLVGESAASIDAYAATDPAECFAVLSEYFFSAPELFAPRFPALWQRFCQFYRQDPSQRLRVSAAEGDYGEESEH
2249011..2249088                   attL                                                                                 N/A                 ATTCCTCTGTAGTTCAGTCGGTAGAACGGCGGACTGTTAATCCGTATGTCACTGGTTCGAGTCCAGTCAGAGGAGCCA
2249013..2249085                   tRNA                                                                                 N/A                 TCCTCTGTAGTTCAGTCGGTAGAACGGCGGACTGTTAATCCGTATGTCACTGGTTCGAGTCCAGTCAGAGGAG
2249256..2249372                   hypothetical protein; STL3553_c22490                                                 N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MSLTDTKVKNARPAEKAVKLADGFGLYRFKILAVRLSL
2249386..2249574                   PHAGE_Pseudo_F116_NC_006552: integrase; STL3553_c22500; phage(gi56692927)            6.95e-08            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MFSIGVYPAVSLADARQRRDEVKRLLDQGIDPNAKNRLMKKSFRKSAIKPARPVSSPKADAP
2249981..2250058                   attR                                                                                 N/A                 ATTCCTCTGTAGTTCAGTCGGTAGAACGGCGGACTGTTAATCCGTATGTCACTGGTTCGAGTCCAGTCAGAGGAGCCA
2249983..2250055                   tRNA                                                                                 N/A                 TCCTCTGTAGTTCAGTCGGTAGAACGGCGGACTGTTAATCCGTATGTCACTGGTTCGAGTCCAGTCAGAGGAG
2250222..2250695                   PHAGE_Escher_phiV10_NC_007804: putative protease; STL3553_c22510; phage(gi89152430)     9.11e-53            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MALTDTAGGTQTDPGTGKPSENPPAAPNKPTPPKEETPPGAPEKYAFTAPEGQELDTSALAQFEPVARELNLTQEQAQKLVDVYPKVLAGVQQQQAESWQKQTEDWAAAVKADKDIGGDKLASNLGAAQRAIDTFGTKELKEYLDGTCARSLVNAAP
2251170..2251868                   PROPHAGE_Salmon_LT2: integrase; STL3553_c22520; phage(gi16766072)                    4.09e-45            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MGKLGGEMKALAKHCGGSHKTVNDCIHIVQRFDHHLRALNVHIQRVAQIKVRHIESYIHERLAQGIGKRTLQNEMASLRAVLQQAGRKQVAEHEWLTNKSLGLAGASRSGTRQAITPEHYHHVLETARMKAPGLAAALELARLMGLRSQEAVQSVQWIWGMGTGVGGMWRRCMGKFDSWLRASSGWSRLPPFTVSERLGGGGKYQAALPSPLQSKPESDRTNVEINERTCPE
2259917..2259928                   attR                                                                                 N/A                 CTAAAATCTGGC

#### region 6 ####
complement(2497502..2498173)       PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; STL3553_c24850; phage(gi100082)     1.45e-66            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MNPLSQFSQNDIFCSGQTINIEIAWYASIQQEPNGRKTVTTQRFVQQLSKVNWNWTMKQANEWIEWYVTTFRDVSTQEGETYLSAVQSKRRTIAMGFPSPASDYVETRISLDQQLISQPAATYFMRASRSHFREGIIQGALLVVDASLSACDGSLLICAIDGEFRIKRYRTHPQPHLINLENGRKEALPEDGDGYNSSHAIFGVITYIINDARNAEFDDCPVM
2498033..2498323                   PHAGE_Klebsi_phiKO2_NC_005857: Gp22; STL3553_c24860; phage(gi46402108)               3.33e-34            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MLDKPLCGDGLPAIRFLLYRSIPGYFNIDGLPGAKDIILGELTKRVHRIFPDADVRVKPMMTLPAINTDASKHEKEQISRTVQEMFEEAEFWLVSE
2498472..2498591                   hypothetical protein; STL3553_c24870                                                 N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MQTSNESSRGETDVSITSKMRWSVTFFDVVDVVDVTGQF
complement(2500547..2500990)       PHAGE_Escher_pro483_NC_028943: tail fiber assembly protein; STL3553_c24890; phage(gi971758532)     2.41e-37            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MSIICFSSTSNTYFSEENIPAYKASGLWSNDFYALTDEEVDKYYMKTPPKGMYLGSSNGRIAWVCIPPPTQDDLISAANQEKKKRIDQANEHMNSRRWPGKAALGRLTGDELAQYNLWLDYLDALKAVDTSVAQNIACPIRKAIHIK
complement(2501368..2501895)       PHAGE_Salmon_SJ46_NC_031129: membrane-associated initiation of head vertex; STL3553_c24900; phage(gi100034)     8.15e-15            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MRHFKNFTKTTELTLVQQKLSENCSIQFIQDESGVDWYVLQKLFQPDTLKIQYDKTGLIIAADKDATKLFPLNCSVVEFADTDIPDGFQPGNFTYSNGVIAPVQIDYVALATAERDRRMTSVTAKINQLVEAQDDGDITAVELSELTALREYRTKLRRLALDVAPDINWPEYLNK
complement(2501898..2503139)       PHAGE_Salmon_ST64B_NC_004313: tail protein; STL3553_c24910; phage(gi23505468)        4.86e-63            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MHRIDTPTAQKDKFGQGKNGFTNGDPATGRRATDLNSDMWDAVQEEVCTVIEAAGIPLSKGEHTQLHAAIGRLIYEQVKTRLEKNQNGADIPNKPLFLQNVGLVDVLFKGDGRFLAGTFVSDAIDRTSIGARAATGCQFMRAHQAPDAPDQVSFWQIITLSEVVSPTTVVDVLAVSGNNVLFGHGTGTGITSWRQVAMLEGGAFTGGISAPNMRGDTLVTVGDGTGGMAKGDVDGAGFNGNNLNIKSWNGIGFQNSEDLAIRAYISIRLGVIAAAENLQAGSAIFNKNGDVYGDIWGGGSGPGWLSAFVASKPARQYITMVGVYQNDKTKPFMLHDDGSGVFLATTDMLSGYVQSIRFGAVEHGNLYRSPGFADQLGYVITGVENGDSNDTPDRIQRRLLQLKVNGQWYTVGA
complement(2503200..2503718)       PHAGE_Entero_SfV_NC_003444: capsid protease; STL3553_c24920; phage(gi19548994)       2.26e-97            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MSEREIRCYSGEVRAETHDSEPSRIIGYGSVFDSRSELIFGSFREIIRPGAFDEVLNDDVRALFNHDPNFILGRRSAGTLALTVDERGLRYDITAPETQTIRDLVLAPMQRGDINQSSFAFRVARDGEEWYQDEDGVVIREITRFSRLLDGRPVQAPAILRSERGAILLLNV
complement(2503732..2504061)       PHAGE_Salmon_ST64B_NC_004313: lysis protein (holin); STL3553_c24930; phage(gi23505495)     2.54e-20            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MPHNPNTWPDLLELLQSWWRGDTPLGAVIMSIVMAGLRIAYFGSGGGWKRKMLEILLCGALTLTFASALEYVGWMSRNEARAFEDMNPKDGLDEMLVSVNASRPAKTTI
2504358..2505689                   putative bacteriophage protein; STL3553_c24940                                       N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MLETLSFTERDEFQRRNIAENIIKLLKPEADISPLVIDGAWGTGKSEFSIKLKNLIIEQETESKVVYVDAFKGDHAESPLLLITSAIASILPEEEKQNFIKRSLPAIRFGLKTVLKAGAGWFLRQEASEVAEEFQDAMKKASNAAIDGTIENILEDHMESEKNINSLKSCIEDISNKQKIVIIIDELDRCKPSFSTNIIETIKHIFDINNVFFILVTNTEQLKASINHIYGYSINSQKYLDKFIKYTITLPDTCLINGHNVCKTSVIYWDHLVGETTLLNKINSLVGSFICDLIQRTNLSLRETQTFSRNLNIFRLLNDNECKSNDPFINMIVVVAVFIHCFGDKEKLKQEITAESISYLADLLNIKEIPYSYERRSQIPEISIIFFGIIKDSITLNERFAPKSDEELKKFTNVYTDYEHLKFWSTTPRELMIKYINQMSFIQ
complement(2506101..2507090)       PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; STL3553_c24950; phage(gi100127)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MRALLTPEIAPRMGVVLFRPGAELMPLFMQGRVLLEPEPEQFSSFASGAVPAVSQPLADDPAVRDVFCNESVIYRAGGLDSLESWLLRGNGCQWPHSDWHSEQMTTMRHAPGAIRLCWHCDNLLREQFTERLKSIAVENTTKWVLSVVCRDLGFDDMHAVTLPELCWWMVRNNLAEVLPESAARKALRMPKAIVQSATRESEIVPSVLATSIVQDKAKKVLALRVDPESPESFMLRPKRRRWVNERYTRWVKSQPCTCCGKQADDPHHLIGYGQGGMGTKAHDLFVLPLCRTHHNELHADTVAFEEKYGSQLELIFRFIDRALAIGVLA
complement(2507098..2507328)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; STL3553_c24960; phage(gi23505490)     2.61e-50            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MTANQAYQQLAKLGVVEHRERYSRSAINGIKKFWSLTAKGCMFGKNITSPANPRETQPHFFESKFPELLKLLDTVH
complement(2507419..2509785)       PHAGE_Phage_Gifsy_2_NC_010393: prophage virulence determinant; secreted effector protein; STL3553_c24970; phage(gi169257322)     2.01e-86            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MPFHIGSGCLPATISNRRIYRIAWSDTPPEMSSWEKMKEFFCSTHQTEALECIWTICHPPAGTTREDVINRFELLRTLAYAGWEESIHSGQHGENYFCILDEDSQEILSVTLDDAGNYTVNCQGYSETHRLTLDTAQGEEGTGHAEGASGTFRTSFLPATTAPQTPAEYDAVWSAWRRAAPAEESRGRAAVVQKMRACLNNGNAVLNVGESGLTTLPDCLPAHITTLVIPDNNLTSLPALPPELRTLEVSGNQLTSLPVLPPGLLELSIFSNPLTHLPALPSGLCKLWIFGNQLTSLPVLPPGLQELSVSDNQLASLPALPSELCKLWAYNNQLTSLPMLPSGLQELSVSDNQLASLPTLPSELYKLWAYNNRLTSLPALPSGLKELIVSGNRLTSLPVLPSELKELMVSGNRLTSLPMLPSGLLSLSVYRNQLTRLPESLIHLSSETTVNLEGNPLSERTLQALREITSAPGYSGPIIRFDMAGASAPRETRALHLAAADWLVPAREGEPAPADRWHMFGQEDNADAFSLFLDRLSETENFIKDAGFKAQISSWLAQLAEDEALRANTFAMATEATSSCEDRVTFFLHQMKNVQLVHNAEKGQYDNDLAALVATGREMFRLGKLEQIAREKVRTLALVDEIEVWLAYQNKLKKSLGLTSVTSEMRFFDVSGVTVTDLQDAELQVKAAEKSEFREWILQWGPLHRVLERKAPERVNALREKQISDYEETYRMLSDTELRPSGLVGNTDAERTIGARAMESAKKTFLDGQRPLVEEMLGSYLNVQWRRN
complement(2510103..2510222)       hypothetical protein; STL3553_c24980                                                 N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MLLRVLRVMFPGCGLLARALQSCLIRMKTVALIFMLLAV
complement(2510454..2511245)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber protein; Lambda gpStf (gpN) homolog; STL3553_c24990; phage(gi169257320)     3.48e-83            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MISLEDASLTKKGIVKLSSATDSDSEALAATPKAVKTVMGEVRTKAPLDSPAFTGTPTTPTPPGDAKGLQTTNAEFVRKLIAALVGSVLEPLDTLQELADALGNDPNFATTVLNKLAGKQPLDETLTALSGKSVDGLIEYVGLRETISRAADALQKSQNGGDIPDKDLFVRRIGAARAFDGAVIIGCDDNPWTTAEFIVWLESQGAFNHPYWMCRGSWSYAYNKIITDTGCGNICLAGAVIEVMGVRGAMTIRVTTSHSVSGW
2511374..2511751                   PHAGE_Entero_HK225_NC_019717: DNA damage-inducible protein; STL3553_c25000; phage(gi428782403)     1.12e-06            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MLMTRRLPPFWLCQPTPRWLMPPRLLWSPYLRCSPQMLRMKLPTKIPLENQPVRAGFFMPTIKKLADARDVILHELILHELIGHLSCAVVTVKSMQATNVNHVCTKTEKAHLHPILEKMFAVAGK

#### region 7 ####
2895171..2896640                   PHAGE_Phage_Gifsy_1_NC_010392: leucine-rich repeat protein; STL3553_c28520; phage(gi169257209)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MKIGFQPAILQYAYTSNEATSNLELLNKWRIESPDIEKEERNSIYDKIIEANHTGSLSITAHHVTSIPVFPDNLSELNLSSCYTLESIPNLPDGLKSLTISGNQTIKISYFPDSLESLSIDMQAYEENYTFPALPYGLKSFTACYGKFLPPLPPHLSSLSLQNFSEILCAELPYKLDKLDLQNCPFLPLMKMLPEELKELSIELIRTVPGTVIDDILPDKLKKLSINFCDNIKLPVKLPVNLKSINLSSRTPIAWEIPTCNLPAHIDISTDGYVKLNPEFLTRSDITFSNKPAGDVLSFQPGDVVYGLCKARDRVNTLVNSLYYFSKKDIIIQNTLTDAVWDRKNRAVFNKDEKIAERLNDVQRGIFFREFLSQHKKYNITEDKYSDLSNEECWIKTSKAGLEFQTRLRERSVIFVIDNLVDAISDIANKTGKHGNSITAHELRWVYRNRHDDLVKQNVKFFLNGEAISHEDVFSLVGWDKYKPKNRNR
complement(2896844..2896975)       hypothetical protein; STL3553_c28530                                                 N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MLSENLIKEKIISIDIFLFLQVFNACPNKRAQMVKNLVGHKKV
2897083..2897220                   hypothetical protein; STL3553_c28540                                                 N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MKNSIFLPLLLVLSATTFSALVMAASHSPHQIIQNIFPVAGRQIS
complement(2897933..2898052)       PROPHAGE_Xantho_33913: ISxcd1 transposase; STL3553_c28550; phage(gi21231544)         6.43e-07            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MIYYSAQLFITLCFIHPGKPLQNACIERYNRTVGYDWLG
2898169..2898312                   PROPHAGE_Escher_CFT073: putative transposase; STL3553_c28560; phage(gi26246170)      4.73e-06            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MQKTIHKTRDKNHARRLTAMLMLQPGRQYRPRCQNALLRPFTHWTLD
complement(2899448..2900026)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage side tail fiber assembly factor & structural component; Lambda gpTfa homolog; STL3553_c28570; phage(gi169257212)     5.79e-141           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MTFKMSDTPQTIKIFNLRSDTNEFIGAGDAYIPPHTGLPANCTDIAPPDIPASHIAIFDAETGTWSLHEDHRGETVYDTTTGNQVYISAPGPLPENVTSVSPDGEYQKWDGKAWVKDEAAETAARLREAEGTKSRLLQMASEKIAPLQDAVDLDEATDKEKASLLAWRKYRVQVNRVDTLKPVWPEKPASSL
complement(2900016..2900840)       PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical protein; contains pfam01661, Macro, Macro domain; STL3553_c28580; phage(gi169257213)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MIKLILSAPVPAMAVAFEHSFQNTENVEIIPGPFETIPEFDCMVSAANSFGLMDGGVDAAITAYFGPQLQERVQQHILREYLGEQPVGTAFVIETGNSKYPWLVHAPTMRVPLIIDGTDAVYNATRAALLAIFQHNKSAGEDRKIKSVVFPAMGAGCGQVSPGSVARQMKLAWDGFINCTTEINWQYASARQNAVFSTTAYCPSKALCPNARTEYIGFGDYRTYCKKSGNTCISPRHQVDDIYIGAHSHAVFLSPNSHGKHLKPEYLSGVKNDV
complement(2900837..2903209)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage side tail fiber protein; Lambda gpSft (gpN) homolog; STL3553_c28590; phage(gi169257214)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MPVLISGVLKDGTGTPVQNCTIQLKACRTSTTVVVNTVASENPDDAGRYSMDVEQGQYTVTLLVEGYPPSHAGVITVYDDSKPGTLNDFLGAMTEDDVRPEALRRFEAMVEEVARQASEASRNATAAGQASEQAQTSAGQAAESATAAVNAAGAAEASATQAASSAASAESSAGTATTKAGEASASAASADTARTAAAASAAAAKTSEANADVSRTAAGDSAAAAAASATAAQTSAARAGASETAAKTSETQAASSAGDAGASATAAAASEKAAAASAAAAKISETNAATSASTAAASATAASSSASEASNHAAASDTSASLAAQSSTAAGAAATRAEDAAKRAEDIADVISLEDASLTKKGIVKLSSATDSDSEALAATPKAVHAVMDEVQTKAPLDSPVFTGTPTTPTPPDDAKGLQTANAEFVRKLIAALVGSVPESLDTLQELADALGNDPNFATTITNMIAGKQPLDDTLTALSGKSIEGLIEYVGLRSTIDKAAGALPAGGTAVAANRLASRGALPALTGTTRGSDGGLIMGEVYNNGYPTQYGNILRLTGTGDGEILIGWSGTNGAPAPAYIRSHRDTADAEWSEWAMLYTTLNPPPDSHPVGAAIAWPSDATPAGYALMQGQSFDKSAYPLLAIAYPSGVIPDMRGWTIKGKPISGRAVLSQEMDGNKSHSHTARAQDTDLGTKSTSSFDYGTKSTNTTGNHTHQFGGYINSYWGDSNHTSFQPGGGAWTQAAGDHAHTVYIGGHEHTMYIGPHGHVVIVDADGNAETTVKNIAFNYIVRLA
complement(2903263..2903505)       PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; STL3553_c28600; phage(gi169257215)     1.32e-53            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MTMSRVISLAAGVSLSVLFSTAAVADNGRGSGNSNIENQTRIYTGTDRGQKQHREAKGQIITRSVQCSLPAYLRDPDNQC
complement(2903544..2906906)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage host specificity protein; tail fiber; Lambda gpJ homolog; STL3553_c28610; phage(gi169257216)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MGKGGGKGHTPREAPDNLKSTQLLSVIDAISEGPIEGPVNGLQSVLVNQTPVVDRDGNTNIHGVKVVYRVGEQEQTPLEGFESSGAETVLGVQVKYDNPVTRTITAANIDRLRFTFGVQSLVEANSKGDRNPTSVRLQIHLERYGQWVVEKEITITGKTTTQYLASVIVDNLPPRPFGIRMVRVTADSTTDQLQNNTVWSSYTEIIDVRQRYPNTAVIGLQVESEQFGSQQVTRNYHFFGRIIHVPSNYDPVARTYSGIWDGTFKPAYSNNPAWCLWDVLTHPRYGMGQRIGAADVDRWALYAIGQYCDQMVPDGFGGTEPRMTFNAYLAQQRKAWDVLTDFCSAMRCMPVWNGQMMTFVQDRPSDTVWTYTRSNVVMPDEGTPFRYSFSARKDRHNAVEVNWIDPDNGWQTSTELVEDTVAISHYGRNLVKMDAFGCTSRGQAHRAGLWLIKTELLETQTVDFSVGAEGLRHVPGDVIEVCDEDYAGISLGGRILSVDRARRILTLDREITLPSSGTTLISLMDGEGLPVSVDVQSVTDGVQVQVSRIPDGVAEYSVWGLKLPSLRQRLFRCVAVRENDDGTYAITAVQHVPEKESIVDNGASFDPQPGTIHGTVPPAIQHLTTEILAEEGQYQVLARWDTPRVVKGASFSLRLNVAAEDGSDRLVSSAGTPDTQYRFRGLTPGRYTLSVRAVNSQGQQGDPASTQFSISAPAAPSFIELTPGYFQITATPRQAVYDPTVQYEFWFSDAQITDIHQVENAARYLGTALYWIAASVNIRPGRDYYFYIRAVNQVGKSAFVEATGQASNDAAGYLDFFKGQITESHLGKELLEKVELTEDNASKLQQFSKEWQDANDKWNAMWGVKIEQTKDGKYYVAGLGLSMEDMPDGKISQFLVAADRIAYINPANGNETPGFVMQGDQIIMNEAFLKYLSAPTITSGGNPPAFSLTPDGKLTAKNADISGHINAVSGSFTGEINATSGKFSGVIEAREFVGDICGSKVMQGVSIRETNDERSTSTRYTDSATYQIGKTITVMANCERNGGSGAITVTININGQVKTAEVIPYTAGLPAMYQTVVFSVYTTSPVVDISVSLRVRGQYTTSASVWPLVMVSRSGNNFTN
complement(2906968..2907615)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tip assembly protein; Lambda gpI homolog; STL3553_c28620; phage(gi169257217)     6.47e-156           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MATTHALHLATPGMARICLYGDLQRFCRRVSLQVASGAEAVRALAVQLPGLRQKLNDGWYQVRIAGDDVTADTLTTSLHDPLPPGAVIHIVPRLGGAKSGGVFQAVLGAALIAVAWWNPAGWLGAAAVSGMYMTGASMVLGGVAQMLAPKPKMSEMRQTDNGRQNTYFSSLDNMVANGNTLPVLYGEMQVGSRVISQEVSTADEGDGGQVVVIGR
complement(2907513..2908148)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tip assembly protein; Lambda gpK homolog; STL3553_c28630; phage(gi169257218)     3.05e-148           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MNISAAPEDYFRMAPEDWLRAETQGDIVALVHSHPGGQPYLSDVDRRLQVQSDLPWWLVCAGQVHKFRCVPHLTGRHYKHGVFDCYTLFRDAYHLAGIDMPDFHRDDDWWRHGDNLYLDNLETTGFYRVSAASAQPGDVLICCFGSSVPNHAAIYCGDGELLHHIPEQLSKRERYTDKWQRRTHSIWRHRAWRASAFTGICNDFAAASACR
complement(2908257..2908955)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tip assembly protein; Lambda gpL homolog; STL3553_c28640; phage(gi169257219)     2.74e-174           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MQDISQDTLNESAKLAQSARITLWEIDLTQSGGDRYFFCNEANEKGEAVTWQGRKYDVYPVDGCGFEMNGKGAAARPSLKVSNLYGMVTGMVEDLHSLVGATVIRRIVYARFLDAVNFQNGNQEADPEQESVSRWVIEQCSDLTAVSATFVLATPTETDGCVFPGRIMLANTCTWIYRSDECGYTGPAVADEFDNPTADPAKDACSRCARGCALRNNTGNFGGFLSINKLSQ
complement(2908965..2909294)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tip assembly protein; Lambda gpM homolog; STL3553_c28650; phage(gi169257220)     6.65e-77            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553METFNWKIRPDMTVESEPKVTSIKLGDGYEQRRPAGLNNHLAKYNVTVRIRKGEHQNLEAFLSRHGGVKSFLWTPPYTWTQIRVICRKWSINVGSLWVTVTTTFEQVVI
complement(2909297..2912392)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tape measure protein; minor tail protein; Lambda gpH homolog; STL3553_c28660; phage(gi169257221)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MDQIANLVIDLSIDSAEFRNEVPRIKKLLNDAAGDSERSAARMQRFLDKQTEATRRTSASLEQVTASSTAYSSAVEKSAAASTRLAADVDQTRQRVEALGRKLREEQAQSAAVAAAQDRTSAAFYRQIDSVKQLSGGLQELQRIQAQVRQAKGRGDISQGDYLALVSETARKTRELTDAEALATQKKAQFIRRLKEQTTVQGLSRTELLRVKAAELGVSSAADIYIRKLERTGTATHTLGLKSAAARRELGVLAGELARGNFGALRGSGITLANRAGWIEQLMSPKGMMLGGLAGGVAAAVYGLGKAYYEGAKESETFNKQLILTGSYAGKTTGQLNAMAKSLAGNGVTQHDAAGVLAQVVGSGAFTGQAMAMVSRTATRMQENVGQSVDETIRQFKRLRDDPVNAAKELDRTLHFLTATQLEQIRVLGEQGRVADAAKIAMSAYSEEMNKRMGDVHDNLGWIERAWNAVGDAAKWAWDRMLDIGREDTLDEKIATLQEKIARDRKTPWTVSSSQTEYDQQQLNELQEQKRQKDLLDAKAQAERNYQETQKRRNEQNAALNRDNETESLRHQREVARITAMQYADAAVRNAALERENERHKKALSQQAKKPKTYHNDEARRLLLQYSQQQAQTEGQITAAKLSTTEKMTEAHKQLLSFQQRIADLSGKKLTADEQSVLAHKDEIALALQKLDISQQDLQHQNALNELKKKTLTLTSQLADEESRVRQQHAMALATMGMGDQQRGRYEERLKIQQHYQEQLEQLKRDSKAKGTYGSDEYRQAEQALKGSLDRRLAEWADYNAKVDAAQGDWTLGASRALDNFLAQGGNVAGMTENVFTNAFNGMADSIANFAVTGKGSFRSLTVSILADLAKMEARIAASKLLGSVLAMFGFGTSAGGSTPSGAYSSAALSVIPNADGGVYRSAGLSQYSGSIVNRPTFFAFAKGAGVMGEAGPEAILPLRRGADGKLGVVAAGSGGMAMFAPEYNIEIHNDAGNGQIGPQALQAVYNIGKKAAIDFWQQQSRDGGIAGGGR
complement(2912364..2912678)       PHAGE_Phage_Gifsy_1_NC_010392: part of bacteriophage tail assembly chaperone gpG by translational frameshifting; Lambda gpT homolog; STL3553_c28670; phage(gi169257222)     2.93e-71            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MRLAREFRRPDWRQMLAEMSATELGEWAEHFGKNSFSDMLLDAEFATLKSLISGLVTGTHHDAEMFSLITDPESLHEKTDDELMILGEGITGGVRYGPDSEPGH
complement(2912699..2913094)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail assembly chaperone; Lambda gpG homolog; STL3553_c28680; phage(gi169257223)     2.51e-93            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MFLNTDTFNYGGHSIVLSELSALQRVDYLKFIQQRTADYDAQPETLTEAERQTEFMQMGVDINAWLVSRSLCESKKEEEARALYESVRLEWSYEALGRGADMVLSLSGMRLPASQEDDSGSEKDTTTPEKS
complement(2913145..2913888)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage major tail subunit; Lambda gpV homolog; STL3553_c28690; phage(gi169257224)     5.10e-174           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MGTPNPLVKTKGAGTTFWLYTGSGDAFKNPLADDDWLRLAGIKDLQPGEMSADAEDDDYLDDENADWKSTTQGQKSVGDTTATLAWKPGETGQKKLVELFDTGEVRAFRIRYPNGTVDVFRGWLSSLGKTVTSKEVMTRSVKITGVGRPSLAEEDTPDVVSVSGVTVAPASATVAAGATTTLTFTVKPDNASDKTLQVATADPLIATVTLKDNVATVKGVKAGSVNIVGISSDGSLVAVAAVTVTAS
complement(2913899..2914300)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail shaft stabilization protein; Lambda gpU homolog; STL3553_c28700; phage(gi169257225)     2.90e-93            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MSKHTLIRRAVLEKLESVTGAPVTLFDGLPAFVEQEDLPAIAVWLTDAQYTGLMTDEDDWQATLHTAVFLRAQAPDTELDIWMEEKIFPALEEVSGLERLIDTMTPLGYDYQRDSEMATWGMAEITYRITYTN
2914289..2915539                   PHAGE_Phage_Gifsy_1_NC_010392: transposase; STL3553_c28710; phage(gi169257226)       0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MFAHQNASFPPRPEGRGGKEAVFRLTVFCIITFSSLICEAMKRAYKYRFYPTTEQAELLAQTFGCVRFVYNSILRWRTDAYYERKEKIGYLQANARLTALKKEPEFAWLNDVSCVPLQQSLRHQQTAFANFFAGRAAYPAFKSKRHKQAAEFTASAFKYRDGKLYMAKNKIPLDVRWSRPLPSVPSTVTISKDAAGRYFVSCLCEFEPASLPITSSMVGIDVGLKDLFVTDTGFRSGNPRHTAKYAARLALLQRRLSKKAKGSKNRAKAHLKVARLHAKIADCRLDALHKATRKLINDNQVVCVESLKVRNMIRNPSLSKAIADASWGELVRQLRYKGEWAGRSVVAIDQFFPSSKRCSCCGFIMKKMPLDVRKWQCPECGTDHDRDVNAARNIKAAGLAVLAHGEPVNPESLKAA
complement(2915588..2916166)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage head-tail assembly protein; Lambda gpZ homolog; STL3553_c28720; phage(gi169257227)     1.05e-135           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MKGLENAIRNLNSLDRQMVPRASIWAVNRVAQKAVSVATRKVARETVAGDNQVRGLPLKLVRQRVRLFKAGTDGKRSARIRINRGNLPAIKLGAAQVRMSKRRGKLLYRGSVLKIGPYLFRDAFIQQLANGRWHVMRRVNGKNRYPIDVVKIPLSGPLTQAFESATQSLIDEEIPKQLGYALKQQLRLYLSR
complement(2916194..2916577)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage minor capsid protein; forms tail attachment site on head; Lambda FII homolog; STL3553_c28730; phage(gi169257228)     6.78e-87            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MSQSENLFDTAISQADDAILRVMGTVATITSGVLAGATLTGVFDDPESVSYAAGGVRIEGDKPTFFVKTSLTVHLKRPDTLTILGDTFWVDRITPAGGDSSIILLGRGTPPTDNRRRTGGMFDCSPA
complement(2916588..2916947)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage accessory DNA packaging protein; Lambda FI homolog; STL3553_c28740; phage(gi169257229)     7.18e-80            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MATKEENIQRLRELATRLGRDPDVSGSAAELSQRVMEWEEEAEAEHLPAVENDSDESIVPPGIGQRSERVLIRALRTLHICAIDPDSNRELDMVMAGNPARISQHDVDELIAAGLIIEL
complement(2917005..2918033)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage major capsid protein; Lambda gpE homolog; STL3553_c28750; phage(gi169257230)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MGLFTTRQLLGYTEQKVKFNPLFLSLFFRRTVTFPTQEVMLDKITGKTPIAAYVSPVVGGKVLRNRGGETRVLRPGYVKPKHEVNYAQVVERLPGEDPARLNDPAYRRLRILTDNLKQEEKAIVQVEEMQAVSAVLNGKYTMQGEQFDTVEVDFGRSAGNNIIQATGKKWSEQDRETFDPTYDLDMYCDQASGLINIAVMDGKVWRLLNGFKLFREKLDTRRGSNSQLETAVKDLGAVVSFKGYYGDLAIVVAKTSYVADNGTEKRYLPEGTLVLGNTAAEGIRCYGAIQDSQALAEGIVAATRYPKHWLTVGDPANEYTMTQSAPLMVLPDPDEFVIVTVG
complement(2918088..2918435)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage head decoration protein; Lambda gpD homolog; STL3553_c28760; phage(gi169257231)     2.53e-78            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MSFTTTIEKRADNRIFAGNDPAHTATGVSGITAATPMLTPLMLDDTTGKLVAWDGQKAGTAVGVLALELDGSENLLTYWKSGTFATESLAWPKSVDAIKQANAFAGSAVSHAALP
complement(2918448..2919944)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage prohead protease; Lambda gpC homolog; STL3553_c28770; phage(gi169257232)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MQRNLSHIISQATSAPLLLEPAYARVFFCALGRESGINSLHIPGNNESLDQSDMALVTGDFMATGKPQARFYQVVNGIAVLPVTGTLVHKLGGMRPFSGMTGYDGVTARLQQAVSDPEVKGILLDIDSPGGQAAGAFDCADMIYRMREQKPVWALANETACSAAMLLAAACSHRLVTQTSRMGSIGVVMAHTSYAEKLKQEGIDITLIYSGAHKADLTPSQKLPESVYADYQQRMDEARKMFAEKVARYTGLSVDAVMATEAAVYDGQAIITTGLADGMVNAADAIGVMAEAINSNKTGGTMPELSAADAVTQENQRVMGILGCPEARGHEALAQMLAGQPGMSVAQAKSILAAAAPADTTSTADRILALEEAGGRETLAQTLAAMPEMTVEQARTILAASPIAAATSLHDAVMALDEAKGREELAEKLAVMPGMTTDQARDLLAAAPDKSGNAGLSMNNAFDAFMQSHSPGPISGGKGHSNDTETTLLMSIPGTSAT
complement(2919934..2921514)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage portal protein; Lambda gpB homolog; STL3553_c28780; phage(gi169257233)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MKRTPVLVDVHGTPLRESLGYTGGGIGFGGQMADWMPPAESVDAALLPSLRLGNARADDLVRNNGIAANAVALHKDHIVGHLFLISYRPNWRYLGMRESAAKSFVDEVEAAWTEYCDGIFGEMDAEGKRTFTEFIREGVGVHAFNGEIFLQPVWDAETTQVFRTRFKAVSPKRVDTPGYARGNRQLRAGVETDRNGKALAYHVCDDDWPVAGGERWTRIPRFLPSGRPAMLHIFEPVEDGQTRGANQFYSVMERLKMLDTLQATQLQSAIVKAMYAATIESELDSEKAFEYITAADNKDTPLVNMLANYARYYSTNSIKLGGVKIPHLYPGDELNLQTAQDSDNGFSALEQALLRYIAAGLGVSYEQLSRDYSQVSYSSARASANESWRYFLGRRRFIAGRLATQMFSCWLEEALIRGVIRAPRARFSFWEARSSWSRSEWIGAGRMAIDGLKEVQESVMRIEAGLSTYEKELAIMGEDYQEIFRQQVRESEERRAAGLSRPVWITDTYQQQIAASRQTEEEKRAT
complement(2921511..2921714)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage head-to-tail joining protein; adapter between portal and gpFII; Lambda gpW homolog; STL3553_c28790; phage(gi169257234)     4.65e-42            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MATITELQEARVALHDLMTGKRVATVQKDGRRVEFTATSVGDLKKYVAELEASLCNGRRRAPVGVRL
complement(2921698..2923629)       PHAGE_Phage_Gifsy_1_NC_010392: DNA packaging protein; large terminase subunit; Lambda gpA homolog; STL3553_c28800; phage(gi169257235)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MISGERRANNANRAITNGLIALHIPVPLTTVQWADEYYYLPKESSYTPGKWETLPFQVAIMNAMGYELIRVVNLIKSARVGYTKMLLGVEGYFIEHKSRNSLLFQPTDSSAEDFMKSHVEPTIRDVPVLLELAPWFGRKHRDNTLTLKRFSSGVGFWCLGGAAAKNYREKSVDVVCYDELSSFEPDVEKEGSPTLLGDKRIEGSVWPKSIRGSTPKVKGSCQIEKAANESAHFMRFYVPCPHCGEEQYLKFGDGSTPFGLKWEKSKPETVYYLCEHNGCVIRQSELDQKAGRWICDNTGMWTRDGLAYFSASGEEVPPPRSITFHIWTAYSPFTTWIQIIYDWLDALKDPNGVKTFINTTLGEPYEEAVAEKLSHELLLEKVIHYAAPVPERVVYLTAGIDSQRNRYEMYVWGWAPGEEAFLIDKQIIMGRHDDEDTLQRVDAVINKKYRHADGTDISISRICWDIGGIDAEIVYKRSKKHGIFRVLPVKGASVYGKPVITMPKKRNQSGVFLCEIGTDTAKEMLYARMGAVTAPADEATPYAIRFPDNPDVFTEVEAKQLVAEELVEKLVNGKFRLLWDAKGRRNEALDCLVYASAALRVSVQRWQLDLEALATSRKSEEQDTPTLEQLAAMLAGGVNGNNH
complement(2923601..2924146)       PHAGE_Phage_Gifsy_1_NC_010392: DNA packaging protein; small terminase subunit; Lambda Nu1 homolog; STL3553_c28810; phage(gi169257236)     2.10e-115           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MNVNKKKLAEIFGCDVRTVTAWQSQGLPLVSGGGKGNEAVFDTAAAISWYAERDASIENEKLRKEVDDLRAAAESDLNPGTIDYERYRLTKAQADAQELKNAEREGLVLETELFTYILQRVAQEIAGILSRVPLVLQRKYPDLCQSHIDVVRTEIARASGRAATIADVEKWTDDFRRAQGE
2924511..2924834                   PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; STL3553_c28820; phage(gi169257237)     9.95e-73            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MNVEFDKGQNSARYSGVIKGYDYDTYNFQARKGQKVHVSISNEGADTYLFGPGISDSVDLSRYSSELDGNGQYTLPASGKYELKVLQTRNEARKNKAKKYSVNIQIK
complement(2925070..2925543)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage lysis protein; Rz; STL3553_c28830; phage(gi169257238)     4.28e-106           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MMFNWKTMFVGLLLVSLIVAGRLANHYRNNAITYKYQRDTATHNLKLANETITDMTKRQRDVAALDAKYTKELADAQNRNTDLQRRLAAGSRVRVEGRCTVPTTTTTKTASTRRVGNAATVELSPVAGQNVLDIRAGIISDQEKLKYLQEYIRTQCK
complement(2925540..2925989)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage lysin protein; endolysin; STL3553_c28840; phage(gi169257239)     3.69e-106           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MRISEKGITLIKEFEGCSLKAYPDPGTGGDPWTIGYGWTHSVDGKPVKPGMMIDEATAERLLKTGLVGYENDVSRLVKVKLTQGQFDALVSFAYNLGARTLSTSTLLRKLNAGDYAGAADEFLRWNKAGSKVLNGLTRRREAERALFLS
complement(2925976..2926311)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage lysis protein; holin; STL3553_c28850; phage(gi169257240)     1.04e-73            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MKMNDKTPEFWAAVLTGLKNAWPQILGALMAGLIAYGRLIYDGATRKNKWLEGVLCGALSLCVTSALDVVGLPVSISPFVGGIIGFVGVDKLREIAISALKKRAGVNDENQ
2926581..2927267                   PHAGE_Phage_Gifsy_1_NC_010392: virulence protein GogA; STL3553_c28860; phage(gi169257241)     7.18e-169           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MPAGIKPIFINNMMSIYGLSHPHDSKVFPDLPEHQDNPSQLRLQHDGLATDDKARLEPMCLAEYLISGPGGMDPDIEIDDDTYDECREVLSRILEDAYTQSGTFRRLMNYAYDQELHDVEQRWLLGAGENFGTTVTDEDLESSEGRKVIALNLDDTDDDSIPECYESNDGPQPFDTTRSFIHEVVHALTHLQDKEDNNPRGPVVEYTNIILKEMGHTSPPRIAYESSN
complement(2927482..2927670)       PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; STL3553_c28870; phage(gi169257242)     3.75e-40            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MKEGFYWIQHNGRVQVAYYTHGVTEDLETGQTIIGVWHLTQGDDICHNGEAEILAGPLEPPI
complement(2927762..2927835)       tRNA                                                                                 N/A                 CCGCCATTAGCTCAACTGGAAAGAGCACGGAGCTTCTACCTCTGTGGTTCGGGGTTCGAATCCTCGATGGCGGA
2927790..2927802                   attL                                                                                 N/A                 CACAGAGGTAGAA
complement(2928177..2928740)       PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical bacteriophage protein; STL3553_c28880; phage(gi169257243)     1.97e-135           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MTTQISVETLSPITHNQIPVITTELLAHLYGTKIKNISDNFLNNTTRFVVGKHFFKIEKNELREFKNRPETIGLVGKNARSLILWTERGAARHAKMLETDQAWEVFEKLEDCYFSQTLPSPTRQVQPAVDMLNIDLLIKIRDGNVKDIRQVGPDMFVGKVEQILSGLRDSGWIVIKRDLLAEKLATW
complement(2928737..2928862)       hypothetical protein; STL3553_c28890                                                 N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MGEPKGSPVGDPVTPTLYVSPPNPIGVGGGDKQNNHRRASL
complement(2929013..2929690)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage antiterminator protein Q; STL3553_c28900; phage(gi169257244)     2.69e-165           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MNTQYLQYVREQLMVATADLSGETKGQLLAWLENAQFDTKNYPRKKQRIWDEETESWITLNNPPIPGKQSLAKGSAIPLVKPVEYSTASWRRAVLSLDEHYKAWLLWNYSENTCWEHQVEITQWGWSAFAAQLDGKKMAGKTQERLRALIWLAAQDVKSELAGREVYQYKELAGLVGVSEKNWSETFTRHWLTMRAIFLRLDQASLLSVSESRSEQVAFNLYALN
complement(2929824..2930435)       PHAGE_Phage_Gifsy_1_NC_010392: NinG; STL3553_c28910; phage(gi169257246)              1.02e-147           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MAKLPRRKCANKECRQWFHPIREGQIVCSYQCASAVGKEQTRKAREAAQRKAQSLQRAAEKKERAAWRQRKAAVKPLKHWIDLTQRAVNDICRETELAEGLGCISCGTKTAFAWHAGHYRSTAAAGHLRFTRFNIHLQCDVCNVYKSGNIEAYRTALVERYGEAAVLALENNNTPHRWTVEELKEIRLAALADLRALKKLEAA
complement(2930438..2930644)       PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; STL3553_c28920; phage(gi169257247)     1.34e-44            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MAMKYSWFHHHDCTTEQADTLISDYQKRGIRTGKSLNPDFITWTVSAKLPEYAHRVRTPKSLRQKVWG
complement(2930644..2931246)       PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical bacteriophage protein; STL3553_c28930; phage(gi169257248)     1.63e-146           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MAHELQLIKQSSGILIPATPETSDILQSKIKLGAVLVAEFRQVRNPAFHRRFFALLNLGFEYWEPTGGAISANERKLVNGYAKFLAAYGGNESALLDAAEQYLEQIANRRVTNGISLCKSFDAYRAWVTVEAGHYDAIQLPDGTLRKHPRSIAFSSMDEVEFQQLYKSALDVLWRWILSRTFRTQREAENAAAQLMSWAG
complement(2931281..2931529)       PHAGE_Entero_mEp237_NC_019704: hypothetical protein; STL3553_c28940; phage(gi435439314)     2.86e-52            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MSNSALQKSEDSWYDIVRRSDGCVVFSFPSSGRHLIYRVNGMVSMRPLLDDEEVFTPNGFMHFIRRLGYRVTPPSDNMKSTA
complement(2931646..2931879)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage putative DNA damage-inducible protein; DinI homolog; STL3553_c28950; phage(gi169257250)     1.99e-50            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MRIELVISRTKQLPEGAVPALEKELITRLQNQYENCNLTIRRGSQDGLSIVGAADGDKKRIQSILQETWESADDWFY
complement(2932862..2933560)       PHAGE_Salmon_SEN22_NC_028696: EaA protein; STL3553_c28960; phage(gi966201339)        3.54e-90            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MKERGITDGLTMNQLAERNAEHVTTIAALEARCAALVAENVGLKYQEPAGYHVIKECGKVGCSVATLEEAEKTRDFWNKKWTIRPYFYSAQPASERERIRREHAEWSDKTFGDVGPVGPLKHLSKEALETAAEPGDLSELADMQFLLWDAQRRAGITDKQITRAMVEKLEINKSRQWPEPKDGEPRLHIKKHPAPVVPEEITADGIIGMHECGFVEGWNACRAAMLSKWITK
complement(2933574..2934269)       PHAGE_Escher_HK639_NC_016158: replication protein 14; STL3553_c28970; phage(gi356870655)     5.87e-70            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MKPELYRAINNRDGAAMASIAGGNPEHGRVVNSDAERLVDALFMQLKQIFPAATQTNLRSDADERVAKQQWIAAFSENGIRTRKQLSAGMQKARSSQSPFWPSPGQFISWCREGSGALGVSVDDIMGEYWRWRKLVFRYPTSEQFPWRDKNPLYYHVCLELRRRGTEGQLSEKELIRAAGDILHDWEKRALAGKPIPPVCRALSAPSRDRGPTPAELLMAKYKQRKDAGLI
complement(2934266..2935126)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage replication protein O; STL3553_c28980; phage(gi169257255)     3.20e-47            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MANTAEVINFPVPDVAHKEPRVADLDDGFTRIANEILEAVMHAGLSQHQLLVFMAVMRKTYGFNKKSDWVSNEQLSELTGILPHKCSSAKSALVKRGILTQTGRVIGINKTVSEWSSLPVKGTEKKPYLEKVNLPESGKKSLPESGKKSLPESGNGYYPNQVNTKDTITKDSKDNSNKPPKPPRAVSFDASSVQLPDWLSSIIWSSWVEYRRDLKKPIKSQQTVTQAINLLDRCRLNGYTPEEIINRSIANGWQGLFEPDGQAKRSRDTDQESIHWNSPDAWRDFL
complement(2935218..2935640)       PHAGE_Phage_Gifsy_1_NC_010392: probable regulatory protein; transcriptional activator; lambda CII analog; STL3553_c28990; phage(gi169257256)     5.94e-87            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MLPHTNCALISTQTQQMDYQAKRHQPNNHRGYLPMENAIARKLDPPEINPIEIESVLLNRLASVGQKSYAEHMGISESTVSRRKAEGYFCNMAKELAFLGIQAAPPEAVLVSRNYLTAVEILADAGLKAERARPDALGWD
2936348..2937187                   PHAGE_Lactob_LF1_NC_019486: chromosome partitioning ATPase; STL3553_c29000; phage(gi418489414)     1.08e-33            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MPASVISFINMKGGVGKTTLCVGIAEFMANYLGKRVLVIDVDPQFNATQSLLGHYGRVDEYLDQLQTNKITIRRIFEVPTSIMDTAQAIRPVDVITKVSDNLDVILGDINIIFDTSQESVRIFKIKRFIDDNNLRDQYDYIFLDSPPTISIFTDASLVASDFYVVPVKIDHYSILGATSLVSVVRNVRHNHNPNIRHLGFVYTNTDDELTLKTSKIKDNFEEKFSEFYFFEHKLSYVRDLMVGQQGNIPSCYTKSRSDISAISTEFALRVDQLMVSENG
2937180..2937566                   hypothetical protein; STL3553_c29010                                                 N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MDKEQYNTLFRFAHGGVTKESAIGLFVTILLDKDLLKSNHDVKDFVESVFSIALLPYVVRSRTLICAKICRFLVSRERKEINNYGVMARSYFENIFSKEEDLQGHKKRNTALSNMDLWVSRMLKKGDK
2937566..2938228                   hypothetical protein; STL3553_c29020                                                 N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MLSNDPYGNRAETDRFRQEATKYLSDESDINTLVSVFKHVRIYSMIIEMNTNLSHKSHVKGIIYDSLNSIVAILNKRERYLHLNLRSMIEHIARIALNKTYSGGDFDGTVRRRDFDYLKSNRRNENWNYLHNVYINACHYVHFSPQANINTSATFLQLLVNDCHSSQKNLIRNLHRLTSSVMETYITYFHYEVASTFYRSMADLKYLLGNSLYTKFKALN
2938576..2938692                   PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; STL3553_c29030; phage(gi169257259)     2.42e-20            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MIDFARKPARQQAVPLNRIEVLIRRLCYLLAQKGDPDA
2938685..2938843                   PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; STL3553_c29040; phage(gi169257260)     1.82e-31            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MLKQCGYCRKSIDEGKEVKNTLLYLNGSQLARKEKEYCSRQCAEYDQMAHES
2938865..2939215                   PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; STL3553_c29050; phage(gi169257261)     2.14e-82            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MKNSPLIWRGFLHPEFKTGEIMEIVKIEMNLKAVNKSIALFNCEKKVSGVIHSNSTGETTVILDGGYVLGKFDCPHCAVKAISLLTVKVSDGEQAGFGNYRSYKLDYSEKFYQTIH
2939342..2942269                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage exodeoxyribonuclease VIII-like protein; STL3553_c29060; phage(gi169257262)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MSGTNPVFLVRKAKKSSGQKDAVLWCSDDFEAANATLDYLLIKSGAKLKDYFKAVATNFPVVNELPPEGELSLTFCDYYQLAKDNMTWTQIPGVTLPSSEAAAAARQHIVDGVDTETGEVLEDHTENFGNESNSPAQATAPAPELTVVATMPLRHRVLAQYIGEGEYLYHVDASQKKEILRLEMDTDNSYVQNLLLAAENVEAFKKAIEHDIHKIVNAVKKIFPVDGKTPELATVIQFLKTWFETEHIDRGLLVKEWAKGNRVSAIQRTESGANAGGGNKTDRNPDYEHTLDTLDVEIAMATLPMDFNIYELPGSVYRRAKEIVKKKESPFKEWSAALRATPGILDYSRAAIFALIRSAHPEFYHYPGRLQGYINANLTETDHENPTEEALTAARHTPEKDAVEEANRQLAAARGEYVEGISDPNDPKWVKTGTSQPTTEPELVKNVGNGIFDVSALMQNSSTHGTETNPETTSNVQVQKADSDEKQAGDAVQAGEGDLGTGKEAVTVENQNQAETHQNNDSVSQSEPEAQQNVPESQQEEPEAAWPEYFEPGRYEGVPNEVYHAANGISSTQVKDARVSLMYFNARHVEKTIVKERSPVLDMGNLVHVLALQPENLEAEFSVEPEIPEGAFTTTATLREFIDAHNASLPALLSADDIKALLEEYNATLPSQMPLGASVDETYASYEQLPEEFQRIENGTKHTATAMKACIKEYNATLPAPVKTSGSRDALLEQLAIINPDLVAQEAQKSSPLKVSGTKADLIQAVKSVNPAVVFADELLDAWRENTEGKVLVTRQQLSTALNIQKALLEHPTAGKLLTHPSRAVEVSYFGIDEETGLEVRVRPDLELDMGGLRIGADLKTISMWNIKQEGLRAKLHREIIDRDYHLSAAMYCETAALDQFFWIFVNKDENYHWVAIIEASTELLELGMLEYRKTMREIANGFDTGEWSAPITEDYTDELNDFDVRRLEALRVQA
2942280..2943389                   PHAGE_Phage_Gifsy_1_NC_010392: RecT; STL3553_c29070; phage(gi169257263)              0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MENTNIVTTEQQAPNTISASNAIFNVQALGQLTAFANLMADSQVTVPAHLAGKPADCMAIVMQAMQWGMNPYAVAQKTHLVNGVLGYEAQLVNAVIASSSAIHGRFHYRYGGDWERCTRTQEITRDKNGKNGKYTVTERVRGWTDEDEIGLFVQVGAILRGESEITWGEPLYLSGVVTRNSPLWVSNPKQQIAYLGVKYWARLYCPEVILGVYSPDEVEQREEREINPAPVQRMSVQEITSEVSTRTSAQESAANVDAVADDLRERIDTASSVDQAKAIRADIESQKALLGTALFTELKNKAVKRYYQVNAQNKVEAVINSIPNPGEPEAAEMFAKAESTLGAAKRHLGDELHDKYRVPLDDMKPEYIG
2943432..2943671                   PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; STL3553_c29080; phage(gi169257264)     1.38e-52            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MRLINRSKQSPLGRRACDVALAAHHEKFGDYGRQKHVTNYTVVVDGVKVPVEVVNRATSYVATAMIGVRKLRNLPAQAN
2943712..2943996                   PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; STL3553_c29090; phage(gi169257265)     2.94e-64            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MSKKIRDFELMSTREICCQLRISSRTLERYRKRPSDNNPFPEPDCSYMGGSNKWLKTKVNEWQVREMSRPTRRPMSHLNLPRDNKGRLIRSDVA
complement(2943974..2945203)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage integrase protein; STL3553_c29100; phage(gi169257266)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MAISDSYLKSCLGRERDKVEEKADRDGLWVRISKKGAVTFFYRFRFLGKQDKMTIGSYPEFGLKAAREEVTKWAAILARGENPRIRQSLDKAKINSQYTFEELFREWHAMVCVQKETSDQILRSFELHVFPKLGKYPAHQLTLHNWLTVLDRLAQGYTEITRRVISNGRQCYSWAVKRQLLEVNPLSEMSGRDFGIQKKMGERTLDRKEIAIVWRAIEDSRLIERNKILYKLSLIWACRVGELRQAEVSHFDFEEGVWTVPWENHKTGRKSKKPIIRPIIPEMLPLIQRAIELAPGRFVFSKYADKPMSEGFHMSISSNLVKFMLKAYNEQVPHFTIHDLRRTARTNFSELTEPHIAEMMLGHKLPGVWSVYDKYTYIEEMREAYSKWWARLMSIIEPDVLEFTPRQTG
2945421..2945558                   hypothetical protein; STL3553_c29110                                                 N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MIEKLRMFFIEINYYALRLVDQTLEVAVLSLTSVLTETPHSTLQR
complement(2945701..2946180)       sigma-E factor regulatory protein RseC; STL3553_c29120                               N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MIKEWATVVSWQNGQAVVSCDVKASCSSCASRAGCGSRVLNKLGPQTTHTIVVPSAEPLAPGQKVELGIAEKSLLGSALLVYMSPLAGLFLCAALFQMLFGSDLAALSGAVLGGVGGFLVARGYSRKLAERDAWQPVILNVALPPDLVRVETTSIETRQ
complement(2946177..2947133)       sigma-E factor regulatory protein RseB precursor; STL3553_c29130                     N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MKQLWFAMSLVAASLFFSANASADPASGALLQQMNIASQSLNYELSFVSITKQGVESLRYRHARLDGRPLAQLLQLDGPRREVVQRGNEISYFEPGLEPFTLNGDYIVDSLPSLIYTDFKRLAPYYDFISVGRTRIADRLCEVIRVVARDGTRYSYIVWMDMDTKLPMRVDLLDRDGETLEQFRVIAFTVSQDIGSNMQALAKANLPPLLSVPGGEKTKFNWSPSWVPQGFSEVSSSRRPLPTMDNLPIESRLYSDGLFSFSVNVNRATQNSSDQMLRTGRRTVYSSVRDNAEITIVGELPPQTAKRIADSIKFRAVQ
complement(2947133..2947849)       anti-RNA polymerase sigma factor SigE; STL3553_c29140                                N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MIIKFNRLSGVDDSGILEKVLGMQKEKLSALMDGETLDSELLKALTHDPEMQKTWESYHLIRDSMRGDTPDVLHFDISARVMAAIENEPVRQVSPLIPEAQPAPQQWQKMPFWKKVRPWAAQLTQMGVAACVSLAVIVGVQHYNGQSETSQQPETPVFNTLPMMGKASPVSLGVPSEAAPVGSQQQQVQEQRRRINAMLQDYELQRRLHSEQLQFEQAQTQQAAVQVPGIQTLGTQSQ
complement(2947815..2948390)       PHAGE_Rhizob_vB_RleM_P10VF_NC_025429: RNA polymerase sigma-70 factor; STL3553_c29150; phage(gi712913000)     1.52e-09            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MSEQLTDQVLVERVQKGDQKAFNLLVVRYQHKVASLVSRYVPSGDVPDVVQESFIKAYRALDSFRGDSAFYTWLYRIAVNTAKNYLVAQGRRPPSSDVDAIEAENFESGGALKEISNPENLMLSEELRQIVFRTIESLPEDLRMAITLRELDGLSYEEIAAIMDCPVGTVRSRIFRAREAIDNKVQPLIRR
2951276..2951288                   attR                                                                                 N/A                 CACAGAGGTAGAA

#### region 8 ####
3181498..3182022                   PHAGE_Lister_vB_LmoS_293_NC_028929: hypothetical protein; STL3553_c31350; phage(gi971756903)     2.22e-05            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MFTDWHEAAIGKTHNRMNFDCGDADLNQFLQRHARQNHEKGTTKTYVALDNSDVTRIHGFYSVSPASLIYAQVPGAISKGLGRYDVPVFRLGRLAVDKSMQGQGLGAQLLLSAGKRCIQAALQVGGVALLIDAKNKQVCDWYKGFGAVPLNDQPLSLLLSFKTLYAALSASGRL
complement(3182095..3182235)       PHAGE_Entero_HK022_NC_002166: IS903 transposase; STL3553_c31360; phage(gi9634149)     1.14e-13            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MFRIKTLLGGHLSLRNYDAQVGEAMAMVKALNRMTLLAMPTSVRLV
3182647..3183303                   PHAGE_Salmon_SJ46_NC_031129: baseplate distal hub subunit; STL3553_c31370; phage(gi100102)     6.20e-64            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MELIRYADINSDLYRHIWVVGDIHGCYSLLLTRLAQLNFSPDTDLLISTGDNIDRGKENLETLRLLNTPWFISVVGNHEAMALDAFETQDGNFWYVNGGYWYDSVTEKDRQEATELLLTFKQRPHIIEVETSSKKYVIAHADYPDDSYDYGKQVDIDSVLWSRDRLLGSLQGNIHPIRGADTFIFGHMIVDYTTTFANQIYIDTGSFCSGNLSFFKIK
complement(3183475..3183996)       putative cytoplasmic protein; STL3553_c31380                                         N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MKTTLSQPFIINKLSINVKPALSRSGKIVFEANPAQKLYTVFDDHREAPAGFGVKASLTKKTYVIQRRVASSDRNVSEGRKPSSVLKVKVGNVFDFPNIDETRQAARQLVQTMLATKRNFNKIKRETDASELETVIKIVLHEGKPIHFATTVIAFSSDRYLELCDLYSSQAIE
3184155..3186722                   PHAGE_Bacter_B124_14_NC_016770: putative mismatch repair protein; STL3553_c31390; phage(gi374671664)     2.01e-12            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MNESFDKDFSNHTPMMQQYLKLKAQHPEILLFYRMGDFYELFYDDAKRASQLLDISLTKRGASAGEPIPMAGIPHHAVENYLAKLVNQGESVAICEQIGDPATSKGPVERKVVRIVTPGTISDEALLQERQDNLLAAIWQDGKGYGYATLDISSGRFRLSEPADRETMAAELQRTNPAELLYAEDFAEMALIEGRRGLRRRPLWEFEIDTARQQLNLQFGTRDLVGFGVENASRGLCAAGCLLQYVKDTQRTSLPHIRSITMERQQDSIIMDAATRRNLEITQNLAGGVENTLAAVLDCTVTPMGSRMLKRWLHMPVRNTDILRERQQTIGALQDTVSELQPVLRQVGDLERILARLALRTARPRDLARMRHAFQQLPELHAQLETVDSAPVQALRKKMGDFAELRDLLERAIIDAPPVLVRDGGVIAPGYHEELDEWRALADGATDYLDRLEIRERERTGLDTLKVGYNAVHGYYIQISRGQSHLAPINYVRRQTLKNAERYIIPELKEYEDKVLTSKGKALALEKQLYDELFDLLLPHLADLQQSANALAELDVLVNLAERAWTLNYTCPTFTDKPGIRITEGRHPVVEQVLNEPFIANPLNLSPQRRMLIITGPNMGGKSTYMRQTALIALLAYIGSYVPAQNVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATENSLVLMDEIGRGTSTYDGLSLAWACAENLANKIKALTLFATHYFELTQLPEKMEGVANVHLDALEHGDTIAFMHSVQDGAASKSYGLAVAALAGVPKEVIKRARQKLRELESISPNAAATQVDGTQMSLLAAPEETSPAVEALENLDPDSLTPRQALEWIYRLKSLV
complement(3186778..3187158)       conserved hypotheticalprotein; STL3553_c31400                                        N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MNPYKEEIIHAHAAIENWLSKGVGSLEALIARFAADFTMITPGGVCLDYPALGAFFQAQRACRPGLVIVVEHIDLVAEWPEGAALRYRERQQLPGQAETVRWSTVILKRERGRIVWRHLHETTVTA
complement(3187155..3188363)       PHAGE_Mycoba_Enkosi_NC_028936: transporter-like protein; STL3553_c31410; phage(gi971757643)     6.82e-05            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MTYRSKVAVVYLLGFFLDLINLFIASVAFPAMSVDLHTSISALAWVSNGYIAGLTLIVPFSAFLSRYLGARRLIIFSLILFSVAAAAAGFADSLHSLVFWRIVQGAGGGLLIPVGQALTWQQFKPHERAGVSSVVMMVALLAPACSPAIGGLLVETCGWRWIFFATLPVAVLTLLLAYRWLNVASTTMASARLLHLPLLTDRLLRFAMIVYLCVPGMFIGISVVGMFYLQNVAQLSPAAAGSLMIPWSIASFVAIMLTGRYFNRLGPRPLIIVGCLLQAAGILLLTNVTPATSHRVLMMIFALMGAGGSLCSSTAQSGAFLTIARRDMPDASALWNLNRQISFFLGATLLTLLLNALQRVMSLEVAYRWTFIAAAGITLLPLIYAVCLNNRQALLCLKKERS
3188472..3189383                   PHAGE_Burkho_phi1026b_NC_005284: gp58; STL3553_c31420; phage(gi38707948)             5.19e-07            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MLNLQRMSLFIAVVDSGSFTAAAAASGQTKAVVSFNIRQLEKELGVTLLLRSTRRLTLTDAGVLFYQKGVNLLNAAKNLQDEVRASHSGLGGELRITTTPEFGEQVIIPLLAQFSQRHPDLRIRHMSSSHHADLIAERFDVAIRLGSLADSRYRAALISRFTILPVAAPQWLARNPVSSLESLAQAEWIIHERLPTPLRWTVTSNHGQHSRLEISKAGKISVDSARSLMAFALAGSGVALLPQWLVNTALEDGTLIHVLPDYHFPRQGIYAVYPDARHVSTKVRAFIDFLRSQWDCGEHAPSS

#### region 9 ####
complement(3504783..3505796)       PROPHAGE_Escher_MG1655: glycation-binding protein, predicted protease/chaperone; essential for genome maintenance; STL3553_c34650; phage(gi16130960)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MRVLGIETSCDETGIAIYDDKKGLLANQLYSQVKLHADYGGVVPELASRDHVRKTVPLIQAALKEAGLTASDIDAVAYTAGPGLVGALLVGATVGRSLAFAWNVPAIPVHHMEGHLLAPMLEDNPPEFPFVALLVSGGHTQLISVTGIGQYELLGESIDDAAGEAFDKTAKLLGLDYPGGPMLSKMASQGTAGRFVFPRPMTDRPGLDFSFSGLKTFAANTIRSNGGDEQTRADIARAFEDAVVDTLMIKCKRALESTGFKRLVMAGGVSANRTLRAKLAEMMQKRRGEVFYARPEFCTDNGAMIAYAGMVRFKAGVTADLGVTVRPRWPLAELPAA
3506024..3506239                   PHAGE_Pelagi_HTVC008M_NC_020484: 30S ribosomal protein S21; STL3553_c34660; phage(gi460042545)     6.11e-05            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MPVIKVRENEPFDVALRRFKRSCEKAGVLAEVRRREFYEKPTTERKRAKASAVKRHAKKLARENARRTRLY
3506475..3508220                   PHAGE_Helico_phiHP33_NC_016568: DNA primase; STL3553_c34670; phage(gi371671350)      9.47e-52            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MAGRIPRVFINDLLARTDIVDLIDVRVKLKKQGKNYHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEIPYEAGTGLSQIERHQRQNLYQLMNGLNDFYQQSLTHPAAKPARDYLQKRGLSAEIIQRFAIGFAPPGWDNALKRFGNNSDNKALLLDAGMLVNNEQGSTYDRFRNRVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQLYGLYEAQQYSAEPQRLLVVEGYMDVVALAQYDINYAVASLGTSTTADHMHMLFRATNNVICCYDGDRAGRDAAWRALETAMPYMTDGRQVRFMFLPDGEDPDTLVRKEGKAAFEARMEQAQPLSTFLFNSLLPQVDLSSPDGSTQLAALALPLINQVPGDAHRIQLRQTLGLKLGIFDDSQLDRLVPKQAESGVSRPAPQLKRTTMRILIGLLVQNPDLAPLVPPLDALDQNKLPGLGLFKELVKTCLAQPGLTTGQLLELYRGTNDAATLEKLSMWDDIADKAIAEKTFTDSLNHMFDSLLQLRQEELIARDRTHGLSSEERRELWTLNQELARK
3508370..3510217                   PHAGE_Synech_S_CBS3_NC_015465: group 2 RNA polymerase sigma factor; STL3553_c34680; phage(gi331028036)     4.75e-37            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MEQNPQSQLKLLVTRGKEQGYLTYAEVNDHLPEDIVDSDQIEDIIQMINDMGIQVMEEAPDADDLLLAENTTSTDEDAEEAAAQVLSSVESEIGRTTDPVRMYMREMGTVELLTREGEIDIAKRIEDGINQVQCSVAEYPEAITYLLEQYDRVEAEEARLSDLITGFVDPNAEEEMAPTATHVGSELSQEDLDDDEDEDEEDGDDDAADDDNSIDPELAREKFAELRAQYVVTRDTIKAKGRSHAAAQEEILKLSEVFKQFRLVPKQFDYLVNSMRVMMDRVRTQERLIMKLCVEQCKMPKKNFITLFTGNETSETWFNAAIAMNKPWSEKLHDVAEEVQRCLQKLRQIEEETGLTIEQVKDINRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGREPTPEELAERMLMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDTTLELPLDSATTESLRAATHDVLAGLTAREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSEVLRSFLDD
complement(3510341..3510847)       G/U mismatch-specific DNA glycosylase; STL3553_c34690                                N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MVKDILAPGLRVVFCGINPGLSSANTGFPFAHPANRFWKVIHLAGFTDRQLKPEEAEKLLDFRCGVTKLVDRPTVQATEVKLHELRSGGRNLIEKIEDYQPAALAVLGKQAFEQGFSQRGIAWGKQKIAIGATMVWVLPNPSGLNRIKTEKLVEAYRELDQALIMRGL
3510973..3511045                   tRNA                                                                                 N/A                 GGCCCCTTAGCTCAGTGGTTAGAGCAGGCGACTCATAATCGCTTGGTCGCTGGTTCAAGTCCAGCAGGGGCCA
3511003..3511032                   attL                                                                                 N/A                 ACTCATAATCGCTTGGTCGCTGGTTCAAGT
complement(3511492..3512661)       PHAGE_Entero_186_NC_001317: D protein; STL3553_c34700; phage(gi9634082)              0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MMTGMTIDAGASLAPAFMLTLNSQDITSNFSDRLISLTMTDNRGFEADQLDIELDDTDGKVELPLRGAVLTLWLGWQGSALLNKGDFTVDEIEHRGAPDTLTIRARSADFRGTLNSRREESWHDTTLGELVSAIAKRNKLTASVADSLKKIPVPHIDQSQESDAVFLTRLAERNGAAVSVKAGRLLFLKAGSAVTASGKPVPQMTLTRSDGDRHQFAIADRGAYTGVTAKWLHTKDPKPQKQKVTLKRKPKEKHLRALEHPKAKPVSKKTKAKKEQEAREGEYMAGEADNVLALTTVYASKAQAMRAAQAKWDKLQRGVAEFSITLALGRADLFPETPVRVSGFKRVIDEQAWLISKVTHNLNNNGFTTGLELEVKLSDVEYSAEPDDE
complement(3512658..3513125)       PHAGE_Entero_186_NC_001317: F protein; STL3553_c34710; phage(gi9634081)              1.66e-103           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MFVFERRTLPYQSMQHSKDYRWVSNDRVGKPPAYQFLGEGETSIQLAGTLYPAITGGRISLRAVELMAGEGRAWPLIEGTGNILGMYIVDKVSTTHTEFFSDGAARKIDFTLSLKRVDESLAAMFGDLNKQASELLDSAGNLTDKLQGMLGGLTA
complement(3513159..3515612)       PHAGE_Entero_186_NC_001317: G protein; STL3553_c34720; phage(gi9634080)              0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553METTMSNNLRLEVLLKAVDQATRPLKSIQTASKTLSGDIRTTQKGLRDLNGQASKIDGFRKASAQLAVTSQALEKAKREAEELATQFKNTERPTRAQAQVLESAKRAADGLQVKYNSLTESVKRQQRELGAAGINTRNLANDERGLKNRISETTAQLNRQREALAKVSAQQAHLNRVKERYKSGKELAGNMAAAGAAGVGIATAGTMAGVKLLMPGYDFAQKNSELQAVLGVDKQSPEMEALRKQARQLGDNTAASADDAASAQIIIAKSGGDAAAIQAATPVTLNMALSNRRSMEENAALLTGMKSAFQLSNDKIAHIGDVLSMTMNKTAADFDGLSDALTYAAPVAKNAGVSIEQTAAMVGALHDAKITGSMAGTGSRAILSRLQAPTGKAFEAIKELGVKTSDSKGNTRPIFSILKEMQRSFEKNNLGTSQRGEYMKTIFGEEASSAAAVLMEAASSGKLDQLTAAFKASDGKTEELVKVMQDNLGGDFKEFQSAYEAVGTDLFDQQEGSLRKLTQTATQYVLKLDGWIQKNKGLATTIGIIAGGALALIGIIGGIGLVAWPVVMGINAIIAAAGVLGTVFTVTGSAIVTALGAITWPIVAVGAAIVAGALLIRKYWEPISAFFSGVIEGVMSAFAPVREMFAPLAPVFDGIGEKLRGVWQWFKDLIAPVKATQETLDSCKNVGVIFGQVLASALMAPLNVFNKLRSGVDWLLEKLGIINKESGSLDKTAAKTNAATQGNSYIPATSTYGGYQAYQPVTAPAGRSYIDQSKSEYNITLPGGVAPGHQLDRQLRDTLEQIEREKRARQRASMSHD
complement(3515593..3515712)       PHAGE_Entero_186_NC_001317: tail protein; STL3553_c34730; phage(gi9634079)           2.01e-22            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MADIAVIFHWPPSELYSLSLTELITWREKALQRSGNHNE
complement(3515745..3516080)       PHAGE_Entero_186_NC_001317: tail protein; STL3553_c34740; phage(gi9634078)           3.73e-72            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MAKAPRKTPEFVDPAGNEIDTVNPNVVTLDKPIKRAGQTIEKVTLIEPNAGTLRGVSLAAVAQSEVDALIKVLPRMTYPTLTTQELTAMNLPDMLSLAAKVIGFLSPASAE
complement(3516143..3516664)       PHAGE_Entero_186_NC_001317: tail tube protein FII; STL3553_c34750; phage(gi9634077)     1.75e-124           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MALPRKLKYLNMFNDGLSYMGVVESVTLPKLTRKLENYRGGGMNGAAAIDLGLDDDALTVEWSVGGLPDVALWAQYAAPGADAVPLRFAGSYQRDDTGEIVAVEVVMRGRHKEIDGGENKQGENTSTKLSTVCTYYRLTIDGSDIIEIDTVNMVEKVNGVDRLEQHRRAIGLL
complement(3516680..3517867)       PHAGE_Entero_186_NC_001317: tail sheath protein FI; STL3553_c34760; phage(gi9634076)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MSDFHHGTQVIEINDGTRVISTVATAVVGMVCTASDADATLFPLNEPVLITNVQSAIAKAGKKGTLAASLQAIADQSKPVTVVVRVEDGTGDDEEAALAQTVSNIVGGTDENGKYTGIKALLTAQAVTGVKPRILGVPGLDTKEVAVALASAAIKLRAFAYVSAWGCKTISEAMEYRKNFSQRELMVIWPDFLAWDTVKNTTATAYATARALGLRAYIDQTVGWHKTLSNVGVQGVTGISASVFWDLQASGTDADLLNEAGVTTLVRKDGFRFWGNRTCSDDPLFLFENYTRTAQVLADTMAEAHMWAVDKPITATLIRDIVDGINAKFRELKSNGYIVEGKCWFDEESNDKETLKAGKLYIDYDYTPVPPLESLTLRQRITDKYLVNLAESVNS
complement(3518002..3518403)       PHAGE_Salmon_SP_004_NC_021774: tail fiber assembly protein; STL3553_c34770; phage(gi526003632)     3.70e-35            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MSKYYYSFKEKGFFWQPDTESDNYPDDLIPLTDEYYRELMQGQVDGKYIEHRKGGPVLVEHREYTPEELVAQAEARKAELLAEAESVIAPLARAVKMKIATDEEIKRLEAWELYSVMVNRVDTSAPDWPDIPR
complement(3518410..3520050)       PHAGE_Salmon_SP_004_NC_021774: phage tail fiber protein; STL3553_c34780; phage(gi526003631)     1.94e-174           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MSTKFKTIITTAGAAKLAAATLPGGKKVNITVMAVGDGGGSLPEPNASQTKLINEVWRHALNKISQDNRNSNYIVAELVIPPEVGGFWMRELGLYDNEGILIAVANMAESYKPELAEGSGRAQTCRMVIIVSNIASVELSIDSTMVMATQDYVDDKLAEHERSRRHPDATLSEKGFTKLSSATDSASEELAATPKAVKAAYDLANAKYTAQDATTTRKGLVQLSNATDSMSETLAATPKAVKVAYDLANAKYTAQDATTARKGIIQLSNATDSTSETLAATPKAVKAAMDNANGRLEKNSNGGDIPDKAKFVENLGLKETLNPTKRVSIGNIGTGVFDGSTPCINIGDSDSGFIGSADGVLDIYCNGAKVGYINGNGLHMLTDIHFDNARMTTNGDIFSSVWGNNWLSIWITNQLNTRGTIDWINSELAIRDNNINTRATIDYVNQTFARKNTGSIQDWGWIRDDSTGFIMQWGTLGNSNGTYNFPRAFPVGCFAVFVTNASAQGNQVDNAFGYPVSNSQFFAATKSSAIANLVNNFPVSWLALGR
complement(3520057..3520590)       PHAGE_Entero_186_NC_001317: tail protein; STL3553_c34790; phage(gi9634073)           1.49e-117           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MSDARLLPAGSSPLEVAAARACADIENTPVPLRRLWSPDSCPANLLPWLAWAFSVDRWDENWPEETKRDVIRSAYFIHCHKGTIGAVRRVIEPLGYVINVTEWWESDDPAGTFCLDIGVLESGITEEMYLEMERLIADAKPASRHLIGLNIIQDIAGYMYTGGVAYDGDIITVYPDE
complement(3520583..3521491)       PHAGE_Entero_186_NC_001317: baseplate; STL3553_c34800; phage(gi9634072)              0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MATVDLSLLPVPDVVEELDYETILAERIATLISLYPEDQQEAVARTLALESEPVVKLLQENAYREVIWRQRVNEAARAVMLAYAIDSDLDNIGANFNVERLVVTPADDTTIPPTPAEMELDADYRLRIQQAFEGMSVAGSTGAYEFHGRSADGRVADISVISPSPACVTISVLSRENNGAASDELLSIVRNALNGEDVRPVADRVTVQSAQIVDYQIRATLFIYPGPESEPIRAAAEAKLKAYASAQHRLGRDIRLSAIYAALHVEGVQRVELAAPVADIVLDKTQASFCTDYQIVIGGSDE
complement(3521498..3521845)       PHAGE_Entero_186_NC_001317: M protein; STL3553_c34810; phage(gi9634071)              6.83e-75            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MTARYMGMNRNTGLAIRDSEHISQSMRDILLTPVGSRVMRREYGSLLSALIDMPQTPALRLQIMVACYSAIQKWEPRIRLTSISFERGDTGEMYVDITGMRTDTGASVSTTVSLS
complement(3521842..3522483)       PHAGE_Entero_186_NC_001317: baseplate protein; STL3553_c34820; phage(gi9634070)      5.84e-141           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MNTLSTLQELARAIRNLIRSGVVTEVDTVQGLCRVQSGGIQTTWLNWLTTRAGRSRTWWAPSVGEQVLLLAIGGELDTAFVLPGIFSDDNPAPSVSADAWHVVFPDGAVMEYEPETGALTVSGIKTADVTASESITATVPVVLVKAAERITLDTPEVVCTNKLTTATLEVQKGGTMRGNIEHTDGTFKSNGVQVDDHGHGGVQRGGSWTEGTK
complement(3522552..3523001)       PHAGE_Entero_186_NC_001317: O protein; STL3553_c34830; phage(gi9634069)              2.91e-101           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MSELTALQERLAGLIASLSPAARRQMAAEIAKKLRASQQQRIKRQQAPDGTPYAARKRQPVRSKKGRIKREMFARLRTNRFMKAKGSDSAAVVEFTGKVQRMARVHQYGLKDRPNRNSREVQYEARPLLGFTRDDEQMIEDVILSHLGK
complement(3522994..3523461)       PHAGE_Entero_186_NC_001317: N protein; STL3553_c34840; phage(gi9634068)              2.34e-103           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MQKHKSLRKALINAVPQLRNNPDMLRLFADSGHTDSRLASSLSFEKVYVLNVVVTDFTGDLDLIFVPVQAWLREHQPDIMTTDDGREKGFTWMIDINNDDSLDISISLRLTERTLVKEVDGALHVSYAPEPSLPEPVTRPVELYVNGELVSKWDE
complement(3523424..3523582)       PHAGE_Entero_186_NC_001317: hypothetical protein; STL3553_c34850; phage(gi9634067)     9.67e-31            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MPGSDPKTNGDLSADIRRLEGALTACALQVKTVKHCQDELDAEAQKPAQSAD
complement(3523569..3523982)       PHAGE_Entero_186_NC_001317: Orf27; STL3553_c34860; phage(gi9634066)                  6.97e-89            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MKVLITLLVLAVLGLLWLRHENGNLSRSFETANRVASEQKTTISMLKNQLSVAGQLARRNESAQVALREQLAKASAEASRREQTITRLLNENEAFRRWNNAALPDVVRRLHTRPACASAGDCGQRMPEGEPLPDAGK
complement(3523979..3524476)       PHAGE_Entero_186_NC_001317: P protein; STL3553_c34870; phage(gi9634065)              2.56e-117           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MPVINTHQNIAAFLDMLAYSEGTANHPLTKNRGYDVIVTGLDGKPEIFTDYSDHPFAHGRPPKVFNRRGEKSTASGRYQQLYLFWPHYKKQLSLPDFSPLSQDRLAIQLIRERGAIDDIRAGRIERAVSRCRNIWASLPGAGYGQREHSLEKLVTVWRSAGGVMA
complement(3524463..3524759)       PHAGE_Entero_186_NC_001317: holin; STL3553_c34880; phage(gi9634064)                  2.02e-60            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MTEGEKGVLSLFVIGALIVVGKVLAGGEPITPRLFVGRMLLGGFVSMVAGVVLVQFPDMSLPAVCGIGSMLGIAGYQVVEIAIQRRFKSQKGEGDAGH
complement(3524763..3524966)       PHAGE_Entero_186_NC_001317: tail protein; STL3553_c34890; phage(gi9634063)           5.39e-39            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MKVRAMQGDTLDAICARYYGRTEGVVETVLQANPGLSELGVILPHGTAIDLPDVPSSPVTETINLWE
complement(3524966..3525472)       PHAGE_Entero_186_NC_001317: Q protein; STL3553_c34900; phage(gi9634062)              2.79e-119           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MTTVILNQPDEPQDVPGVVIPVPETGDAVIKNTFFFPDVDPKRVRELMRLEQTVSDARLRNAIKTGMAETNAELYDYRLRQAAAGFKQLADVPAEEIDGENVRVFHYLSAVTAMATATLYERYRGVEATGKGDKKADSVETTIDDLWRDMRWSVARLQDKPRCIVGQL
complement(3525566..3526315)       PHAGE_Entero_186_NC_001317: R protein; STL3553_c34910; phage(gi9634061)              1.67e-168           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MTSPAQRHMMRVSASQAAQREQAPLRHATAYEQMLVKLADDRRTLKNIRSNERKAAKKRELLPFYAPWVAGVLADGCGAQDDIVMTVMLWRLDAGDIAGALEIAPYALQYGLTTDHRRTTPYMLVEEVALAALRLRDAGESVDLSWLQTTVDLTDGADVPDMVRARLHKVTGLTLRDAGMNAEALAQFQRAMQLDRNAGVRKEIERLERALKPKAEAPPRKTTKPRTRKPVARPAAKCGRPPKAVKTAG
complement(3526319..3527386)       PHAGE_Entero_186_NC_001317: major capsid protein; STL3553_c34920; phage(gi9634060)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MRPETRFKFNAYLTRVAELNGISTDDVSKKFTVEPSVTQTLMNKVQESSAFLQTINILPVAEMKGEKIGVGVTGTIASTTDTSGDDERKTADFTALESNKYECDQINFDFHLKYKTLDLWARFQDFQRRIRDAIVKRQALDFIMAGFNGTTRAATSDRTKNPMLQDVAVGWLQKYRNEAPTRVMSNITDADGKVVSAVIRVGRNGDYENLDALVMDATNNLIDEVYQDDPKLVAIVGRKLLADKYFPLVNKPQENSEALAADIIISQKRIGNLPAVRVPYFPANAVLVTTLENLSIYFMDESHRRSIDENPKKDRVENYESMNIDYVVEAYAAGCLLENITLGDFTAPAAPESGA
complement(3527463..3528350)       PHAGE_Entero_186_NC_001317: V protein; STL3553_c34930; phage(gi9634059)              0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MTRNPNLRTPDNGKKVSKFFRIGVEGDTCDGRIISASDIQEMAETYDPRVYGCRINLEHIRGLLPDGMFKRYGDVVELKAEKIDDDSALNGKWALFARITPTDDLIAMNKAAQKVYTSMEIQPNFGNSGKCYLVGLAVTDDPASLGTEYLEFCRNAKHNPLNRFKANPENLISAATLAELEFEDQPETVFTALTDKVKAIFSRKQVSDDARMNDVHEAVTAVSEHVQTNLTAQDKRLSDMETALATFKQELTGKVEETSQAFSDLKTTLDKTESFSQPRRTKASGGGGDELLTDC
3528482..3530251                   PHAGE_Entero_186_NC_001317: terminase subunit; STL3553_c34940; phage(gi9634058)      0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MTISTDTTLLHDPRRQASLLYWQGFSVPQIAEMLQVKRPTVQSWKQRDGWDGIAPISRVESSLEARLIQLIAKPQKSGGDFKEIDLLGRQIERLARVNRYSQTGNEADLNPNVANRNKGERKKPKKNFFSDEAIGKLEELFFDQSFEYQLQWYRAGLAHRIRDILKSRQIGATFYFSREALLRALKTGHNQIFLSASKTQAYVFREYIIQFARLVDVDLTGDPIVIGNNGAKLIFLGTNSNTAQSHNGDLYVDEIFWIPNFQKLRKVASGMASQKHLRSTYFSTPSTLAHSAYPFWSGELFNKGRASAADRIEIDISHSALAGGLLCADGQWRQIVTIEDALAGGCTLFDLDQLRRENSDDDFKNLFMCEFVDDKASVFPFEELQRCMVDVMEEWEDFAPFADHPFGSRPVWIGYDPSHTGDSAGCVVLAPPVVSGGKFRMLERHQWKGMDFAAQAEGIRKLTEKYNVEYIGIDATGLGLGVFQLVRSFYPAARGIRYTPEMKTAMVLKAKDTIRRGCLEYDAGATDVTQSFMSIRKTMTSSGRSATYEASRTEEASHADIAWATMHALLNEPLSAGSGMQPKSILEFN
3530251..3530997                   PHAGE_Entero_186_NC_001317: W protein; STL3553_c34950; phage(gi9634057)              8.61e-178           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MKNNVFSQSQIQAIADILHNDSFDYQATWLRVGKLNIDRSITKSRQIGATQLFSREALLDALTTGDNQVWFAHTIEHARVALMYMNNLSARVGVRLTSNGHSLQLDDGAVISFVGEESHCAALAGNVYLDEFGWFNNPLRAAKVAAAIACHKRHNLTMFTTPSDSYAAFRVWNGTTRNHRPSPLINTGDSVFCTDGVWRQSVTLDAACQRGCNLFAPEEIKREYSDDDYRLLFGCDWSFAVAAGEVAA
3530994..3532016                   PHAGE_Entero_186_NC_001317: capsid portal protein; STL3553_c34960; phage(gi9634056)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MSKRKPRKAVAMTASEPQKMEAFTFGEPVPVLDKRDILDYVECISNGKWYEPPVSFSGLAKSLRSAVHHSSPIYVKRNVLASTYIPHPLLSRQDFSRFALDYLVFGNAFLEQRHSVTGQLIKLLTSPAKYTRRGVDDSIFWFVENFTLPHEFAPDTVFHLLEPDINQEIYGLPEYLSALNSAWLNESATLFRRKYYQNGAHAGYIMYVTDPAQSATDVESLREAMRNSKGLGNFKNLFFYAPGGKPDGIKIVPLSEVATKDDFFNIKKASAADLMDAHRVPFQLMGGKPENIGSLGDVEKVAKVFVRNELSPLQDRFREVNDWLGMEVIRFKEYTLDNPE
complement(3533458..3534189)       PHAGE_Entero_186_NC_001317: Orf97; STL3553_c34970; phage(gi9634101)                  3.01e-171           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MDTVIAFLSLALFIAFIVGLIKPSLVRMPNRKRSSAVYLGGCLALGVIGSILWPTEKSQPVAKTDVPAVKVEPATPAFEYADKTLKEYRNEPKETRHDIVKNYVSFKDVPASSADAFYACMSEYTFTKDDALKLSDVLGWCFNDFEKDPQSLNNKINLDAFQGNFSGWDGSYRPLEKLIKASMNDDSSYKHVSTVYHLILNKDPHAVVKTTFRGTNAYGGVVKQTVAARVNVRTGEVDSILGN
complement(3534271..3534753)       PHAGE_Entero_186_NC_001317: Tum; STL3553_c34980; phage(gi9634097)                    5.16e-98            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MILYVYTVSRYGGCVDRELREHVMIERVEMIARLTTEGACQERDREIALNLIAEIAKGNLMKNNNFSVVFSAPPVDETFAKESKVKVNITLDKDQKIGQPIIDAFQCELTRRIQSVFPSTRVTVKKGSMTGVELMGFDKDSDREALDSILQEVWEDESWR
complement(3534830..3536923)       PHAGE_Entero_186_NC_001317: A protein; STL3553_c34990; phage(gi9634096)              0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MLSLQPECVRFDVYRTAAVLEKNQGSQRANAFLISFCKRALPRLELVAKKYECAGINSNVSAAVFGSHFDTELMQYLASRMVNMVARYNRLPDMSRADIDLLAADIANFIRAELADIDDTGFSELKTLYTWYMRAGFISLQFNVTPPHWERVTKKYVGEDEIAPAIARMFNDVWWRGRLRRIAAAWREHLQITVGNVSKKKHTYASKNCVTDWREQKRRTREFLKGLDLEDEDGNRISLIEKFDGSVANPAIRRCELMTRIRGFENICNELGYVGEFYTLTAPSKYHATTKAGYRNSKWNGASPSDTQNYLTGLWARIRAKLHREEIRIFGIRVAEPHHDGTPHWHMLMFMLPEDVERVRLIIRDYAWEEDRHELKSDKAKKARFHAEAIDPEKGSATGYVAKYISKNIDGYALDGETDDESGELLKETAPAVSAWAARWHIRQFQFIGGAPVTVYRELRRLADTEAAHGLSVEFAAVHDAADAGDWAGYVNAQGGPFVRRDDLQVRTLYEPRTEFNQYGEETVCIRGVYDSAIGAGTPILTRLTQWKIVPKRAVDLAVDVKGAPAPSRSSVNNCTGSESDPPILDLTKPLSRRERRELTNRLRKKKPTTRRKFIHGTDKQNVAITKTIDEIHLTTGITISRGEALHLMAGGKSCFNGRWVRGTSQGEIFAAAPSHQAKAWKILNRVAALAEQATKM
complement(3537690..3537914)       PHAGE_Entero_186_NC_001317: Orf80; STL3553_c35000; phage(gi9634092)                  2.06e-33            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MADAMDLAQQREQEDRERHISNARSRIAAPSRFLCEECDAPIPEARRAAIPGVAFCVTCQQIAELKLKYYRGAI
complement(3537914..3538141)       PHAGE_Entero_186_NC_001317: Orf79; STL3553_c35010; phage(gi9634091)                  4.42e-24            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MRNTEIRSFNTDSDALAVLLTDAKKEERKDRALAVSIRLEALAIHITKEGMSGTEAAELLRREATRFENESQELH
complement(3538633..3539142)       PHAGE_Entero_186_NC_001317: CII; STL3553_c35020; phage(gi9634088)                    2.25e-120           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MFDFQVSKHPHYDEACRVFAQRHNMAKLARHAGMNVQTLRNKLNPEQPHQFTPPELWLLTDLTEDSTLVDGFLAQIHCLPCVPVNELAKDKLQSYVMRAMRELGELASGAVSDERLTSARKHNMIESVNAGIRMLSLSALALHARLQTNPAMSSVVDTMSGIGASFGLI
3540146..3541153                   PHAGE_Entero_186_NC_001317: Int; STL3553_c35030; phage(gi9634085)                    0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MTVRKNPAGGWICELYPNGAKGKRIRKKFATKGEALAFEQYTVQNPWQEEKEDRRTLKELVDSWYSAHGITLKDGLKRQLAMHHAFECMGEPLARDFDAQMFSRYREKRLKGEYARSNRVKEVSPRTLNLELAYFRAVFNELNRLGEWKGENPLKNMRPFRTEEMEMAWLTHDQISQLLGECKRHDHPDLETVVRICLATGARWSEAESLRKSQLAKYKITYTNTKGRKNRTVPISKELYESLPDDKKGRLFNDCYGAFRSALERTGIELPAGQLTHVLRHTFASHFMMNGGNILVLQRVLGHTDIKMTMRYAHFAPDHLEDAVKLNPLSFKTNN
3542660..3542689                   attR                                                                                 N/A                 ACTCATAATCGCTTGGTCGCTGGTTCAAGT

#### region 10 ####
4434957..4435003                   attL                                                                                 N/A                 GACACCATCCCTGTCTTCCCCCACATGATGTGGGGGTTTTTTTTATC
complement(4435120..4436100)       PHAGE_Entero_fiAA91_ss_NC_022750: integrase; STL3553_c43640; phage(gi557307610)      0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MAIKKLDDGRYEVDIRPRGRDGKRIRRKFERKAEALAFERYTIANASQKEWGGQRADRRTLSELLDIWWKYHGQNHEHGTKEFNHLLKTISGIGDIPVSRMSKRALMDYRSMRLRDGISAATINRDMYRLSGMFTKLIQLDEFSGQHPIHGLPPLAEANPEMTFLEKAEIEKLLNVLAGDDLLVALLCLSTGGRWTEVATLKPAQITNCRVTFLKTKNGKKRTVPISEELEKKVKEEASAKLFKVDYEKFCGILRRVKPDIPPNQATHILRHTFASHFMMNGGNIIALQQILGHASIQQTMAYAHLAPDYLQNAVALNPLKGGVTL
4436600..4436872                   PHAGE_Escher_P2_NC_041848: hypothetical protein; STL3553_c43650; phage(gi100003)     2.48e-61            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MDAENYVIQYPLDAVHVDKFADLLGKPKTAVSEMVKANKLPIIELRDPCKPKARAGEKWVFIPEFNRAVREAFYNRPVEQRDAWLLWMGL
4437051..4437542                   PHAGE_Entero_fiAA91_ss_NC_022750: DNA replication protein; STL3553_c43660; phage(gi557307614)     2.00e-119           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MTLNLVEKQPAAMRRIIGKHLAVPRWQETCDYYNQMMERERLTVCFHAQLKQRHATMRFEEMNDVERERLVCAIDELRGAFSKRRQVGASEYAYISFLTVSQRRTLFMHAGLTEKEFNQPYWRINEESCYWRDALFRALRELFSLFEYAPTILTSVKPEQYLH
4437606..4437830                   PHAGE_Entero_fiAA91_ss_NC_022750: hypothetical protein; STL3553_c43670; phage(gi557307617)     2.52e-47            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MYTVSENQCGKYALLLQQARTEAQADAATRFSSHLDAMIRHITKAELSRVEIVELLSQESEKFHNIGLSRGEVL
4437830..4438132                   PHAGE_Entero_fiAA91_ss_NC_022750: hypothetical protein; STL3553_c43680; phage(gi557307616)     1.28e-63            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MSCSRSVVLLNNALKITVMENGDLSLIQLCLDKEKRDITESVIAIYQNELNLLSDVVNLLVKRAVFHKQISSVDELTKLTTEIASYCADEFKKLNDKRNW
4438132..4438356                   PHAGE_Escher_P2_NC_041848: hypothetical protein; STL3553_c43690; phage(gi100008)     8.21e-48            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MPDNVDFIQEQQAELLERQINAARVKHCGVSSLVCEECDAPIPAARRAAYPSATRCVSCQSVFEAKNKHYRRMA
4438353..4438628                   PHAGE_Entero_fiAA91_ss_NC_022750: replication initiation protein; STL3553_c43700; phage(gi557307618)     9.13e-61            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MSIRIEIGERYVVTSDSFQFILHEKKRAESGKNAGQEWLAVVGYYPKLSQLVSGLMHHDILTGSAKSFADLNAQVEQLSKRCSEALGSYDR
4438618..4440906                   PHAGE_Entero_fiAA91_ss_NC_022750: DNA replication; STL3553_c43710; phage(gi557307619)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MTVKASGRFVPPSAFAAGTGKTFTGAYAWNAPREAVGRERPLTRDEMRQVQGVLSTINRLPYFLRSLFTSRYDYIRRNKSPVHGFYFLTSTFQRRLWPRIERVNQRHEMNTDASLLFLAERDHYARLPGMNDKELKKFAARISSQLFMMYEELCDAWVDAHGEKESLFTDEAQDHLYGHVAGAARAFNISPLYWKKYRKGQITTRQAYSAIARLFNDEWWTHQLKGQRMRWHEALLIAVGEVNKDRSPYASKHAIRDVRARRQANLEFLKSCDLENRETGERIDLISKVMGSISNPEIRRMELMNTIAGIERYAAAEGDVGMFITLTAPSKYHPTRQVRKGESKTVQLNHGWNDEAFNPKDAQRYLCRIWSLMRTAFKDNDLQVYGLRVVEPHHDGTPHWHMMLFCNPRQRNQIIEIMRRYALKEDGDERGAARNRFQAKHLNRGGAAGYIAKYISKNIDGYALDGQLDNDTGRPLKDTAAAVTAWASTWRIPQFKTVGLPTMGAYRELRKLPRGVSIADEFDERVEAARAAADSGDFALYISAQGGANVPRDCQTVRVARSPSDDVNEYEEEVERVVGIYAPHLGARHIHITRTTDWRIVPKVPVVEPLTLKSGIAAPRSPVNNCGKLTGGDTSLQAPTPSEHAAAVLNLVDDGVIEWNDPEVVRALRGALKHGRRTQNRQQRNGSPLKPYEMAPSARLTRSERMQITRIRVDLAQKGIRPQRWELEVLARGATVSYEGQNFAFTDSHDWSGFAEHFDLFE
complement(4441137..4443344)       putative ATPase; STL3553_c43720                                                      N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MELSLKNVTSYDKNKYTKISLEKRINILYGQNGAGKSTISNFFYNPADDDYRDCRCTNINNYRPLVYNTKFIEDNFFDKDVQKGIFTLSKENTEIEKEISKKREIVKTLKIKLEATKTNYQKIKDRNHDAETSCTESIWLNTEYIRNSDVNSLMAGYLKNKRNLFTKVKSSIRLSDIDLNQLLTDYRELLNHKNTTIQTISPYNPYPISFDDENLLKTPVIDSSNSYLSETIKKLQNLDWVKKGKENYLVGDICPFCQKETIDDKFTEALEQIFDESYAQKITSIKKLKYIYELTTQEQLQLLKTQLNDCTAISIEERKTSLAHISSLEKMLKSNIELINNKIQNPSLSVILDKDKDIEESLLKDIKQYNSRINDLNEKVKQFNLTQDKIKNQFWGALRNYRNTDFEVLEKIQVENDIIIKSLEESIDSINKEIKHTDDEIKELRNKTSNIDATISSINSKLKNLGITCFYIDKHPTIKNSFVIVRSDNTPSKNVYRSLSEGEKTLITFLYFIEYCKGQTNTDEFDNRDSLIVIDDPISSLSQNYIYDIASMIHYDIFTSANKVIILTHNLYFFHELIKLAPISERKFNSTYQLFRITKNLHSSFSNISRDSLQNEYQSLWQILKDARDGKVHNVVIPNTMRNILEYYFAFVHKTNELQDELNKLAQNESNSNFKAFYRYINRGSHSDSINITDMGEITPDIYITQFKEIFRLMGDISHFNKMYEEKKNIEDTTA
complement(4443775..4444809)       PHAGE_Escher_pro483_NC_028943: capsid packaging protein; STL3553_c43730; phage(gi971758513)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MSKKKGKTPQPAAKKMTASAPKMEAFTFGEPVPVLDRRDILDYVECISNSRWYEPPVSFTGLAKSLRAAVHHSSPIYVKRNILASTFIPHPWLSQQDFSRFVLDFLVFGNAFLEKRYSTTGKVIRLETSPAKYTRRGVEEDVYWWVPSFNEPTAFAPGSVFHLLEPDINQELYGLPEYLSALNSAWLNESATLFRRKYYENGAHAGYIMYVTDAVQDRNDIEMLRENMVKSKGRNNFKNLFLYAPQGKADGIKIIPLSEVATKDDFFNIKKASAADLLDAHRIPFQLMGGKPENVGSLGDIEKVAKVFVRNELIPLQDRIREINGWLGQEVIRFKNYSLDTDNG
complement(4444809..4446581)       PHAGE_Entero_fiAA91_ss_NC_022750: large terminase subunit; STL3553_c43740; phage(gi557307593)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MTITTDTTLLHDPRRQAALLYWQGFSVPQIAAMLQMKRPTVQSWKQRDGWDSVAPISRVEMSLEARLTQLIIKPQKTGGDFKEIDLLGRQIERLARVNRYSQTGNEADLNPNVANRNKGGRRKPKKNFFSDEAIEKLEQIFFEQSFDYQLHWYRAGLEHRIRDILKSRQIGATFYFSREALLRALKTGHNQIFLSASKTQAYVFREYIIAFARLVDVDLTGDPIVLGNNGAKLIFLGTNSNTAQSHNGDLYVDEIFWIPNFQVLRKVASGMASQSHLRSTYFSTPSTLAHDAYPFWSGELFNRGRASAAERVEIDVSHNALAGGLLCADGQWRQIVTIEDALKGGCTLFDIEQLKRENSADDFKNLFMCEFVDDKASVFPFEELQRCMVDTLEEWEDYAPFAANPFGSRPVWIGYDPSHRGDSAGCVVLAPPVVAGGKFRILERHQWKGMDFATQAESIRKLTEKYNVEYIGIDATGLGVGVFQLVRSFYPAARDIRYTPEMKTAMVLKAKDVIRRGCLEYDVSATDITSSFMAIRKTMTSSGRSATYEASRSEEASHADLAWATMHALLNEPLTAGISPPLTSTILEFY
4446755..4447609                   PHAGE_Entero_fiAA91_ss_NC_022750: capsid scaffold; STL3553_c43750; phage(gi557307586)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MAKKVSKFFRIGVEGDTCDGRVISAQDIQEMAETFDPRVYGCRINLEHLRGILPDGIFKRYGDVVELKAEKIDDDSALKGKWALFAKITPTDDLIAMNKAAQKVYTSMEIQPNFANTGKCYLVGLAVTDDPASLGTEYLEFCRTAKHNPLNRFKLSPENLISVATPVELEFEDLPETVFTALTEKVKSIFGRKQASDDARLNDVHEAVTAVAEHVQEKLSATEQRLAEMETAFSALKQEVTDRADETSQAFTRLKNSLDSTESLTQQRRSKATGGGGDALMTNC
4447668..4448741                   PHAGE_Entero_fiAA91_ss_NC_022750: major capsid protein precursor; STL3553_c43760; phage(gi557307587)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MRQETRFKFNAYLSRVAELNGIDAGDVSKKFTVEPSVTQTLMNTMQESSDFLTRINIVPVSEMKGEKIGIGVTGSIASTTDTAGGTERQPKDFSKLASNKYECDQINFDFYIRYKTLDLWARYQDFQLRIRNAIIKRQSLDFIMAGFNGVKRAETSDRSSNPMLQDVAVGWLQKYRNEAPARVMSKVTDEEGRTTSEVIRVGKGGDYASLDALVMDATNNLIEPWYQEDPDLVVIVGRQLLADKYFPIVNKEQDNSEMLAADVIISQKRIGNLPAVRVPYFPADAMLITKLENLSIYYMDDSHRRVIEENPKLDRVENYESMNIDYVVEDYAAGCLVEKIKVGDFSTPARATAEPGA
4448745..4449488                   PHAGE_Entero_fiAA91_ss_NC_022750: small terminase subunit; STL3553_c43770; phage(gi557307590)     8.76e-177           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MTSPAQRHMMRVSAAMTAQREAAPLRHATVYEQMLVKLAADQRTLKAIYSKELKAAKKRELLPFWLPWVNGVLEQGKGAQDDILMTVMLWRLDTGDIAGALEIARYALKYGLTMPGKHRRTPPYMFTEEVALAAMRAHAAGESVDPRLLTDTLELTATADMPDEVRAKLHKITGLFLRDGGDAAGALAHLQRATQLDCQAGVKKEIERLERELKPKPEPQPKAATRTPHKTRSVTPAKRGRPKKKAS
4449624..4450097                   PHAGE_Entero_fiAA91_ss_NC_022750: capsid completion protein; STL3553_c43780; phage(gi557307591)     3.58e-111           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MSGEGTVVIPQPAGDEPVIKNTFFFPDIDPKRVRERMRLEQTVAPARLREAIKSGMAETNAELYEYREQKIAAGFTRLADVPADDIDGESIKVFYYERAVCAMATASLYERYRGVDASAKGDKKADSIDSTIDELWRDMRWAVARIQDKPRCIVSQI
4450097..4450300                   PHAGE_Entero_fiAA91_ss_NC_022750: tail protein; STL3553_c43790; phage(gi557307592)     2.79e-42            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MKTFALQGDTLDAICVRYYGRTEGVVEAVLAANPGLAELGAVLPHGTAVELPDVQTAPVAETVNLWE
4450304..4450585                   PHAGE_Entero_fiAA91_ss_NC_022750: holin; STL3553_c43800; phage(gi557307594)          5.41e-58            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MTAEEKSVLSLFMIGVLIVVGKVLAGGEPITPRLFIGRMLLGGFVSMVAGVVLVQFPDLSLPAVCGIGSMLGIAGYQVIEIAIQRRFKGRGKQ
4451097..4451522                   PHAGE_Entero_fiAA91_ss_NC_022750: lysin; Phage; phage endolysin; STL3553_c43820(gi557307595)     2.51e-92            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MKKLSLSLMLNVSLALMLALSLIYPQSVAVSFVATWAILATVICVVAGGVGVYATEYVLERYGRELPPESLAVKIVTSLFLKPVPWRRRAVALVVMVATFISLVAAGWIFTALIYLVASLFFRLIRTACRQRLEGREPCQS
4451510..4451935                   PHAGE_Entero_fiAA91_ss_NC_022750: lysin; STL3553_c43830; phage(gi557307623)          2.32e-95            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MSKLMIVLVVLLSLAVTGLFLAKHENASLRASLDRANNVASGQQTTITMLKNQLHVALTRADKNELAQVALRQELENAAKREAQREKTITRLLNENEDFRRWYGADLPDAVRRLHQRPACTDASDCPQRLPESESLPDAGQ
4451922..4452080                   PHAGE_Escher_P2_NC_041848: hypothetical protein; STL3553_c43840; phage(gi100027)     8.81e-32            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MPGSDPETNGDLSADIRQLENALARCASQVKMIKHCQDENDAQTRQPAQGAD
4452043..4452510                   PHAGE_Entero_fiAA91_ss_NC_022750: tail completion protein; STL3553_c43850; phage(gi557307596)     3.79e-107           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MLKPDSLRRALTDAVTVLKTNPDMLRIFVDNGSIASTLATSLSFEKRYTLNVIVTDFTGDFDLLIVPVLAWLRENQPDIMTTDEGQKKGFTFYADINNDSSFDISISLMLTERTLVSEVDGALHVKNIPEPPPPEPVTRPVELYINGELVSKWDE
4452503..4452955                   PHAGE_Entero_fiAA91_ss_NC_022750: tail completion protein; STL3553_c43860; phage(gi557307589)     3.17e-105           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MNEFKRFEDRLTGLIESLSPSGRRRLSAELAKRLRQSQQRRVMAQKAPDGTPYAPRQQQSARKKTGRVKRKMFAKLITSRFLHIRASPEQASMEFYGGKSPKIASVHQFGLSEENRKDGKKIDYPARPLLGFTGEDVQMIEEIILAHLDR
4453022..4453657                   PHAGE_Entero_fiAA91_ss_NC_022750: baseplate protein; STL3553_c43870; phage(gi557307597)     1.84e-152           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MNTLANIQELARALRNMIRTGLVVETDLNAGRCRVQTGGMCTDWLQWLTHRAGRSRTWWAPSVGEQVLILAVGGELDTAFVLPGIYSGDNPAPSASADALHIRFPDGAVIEYEPETSALTVSGIKTASVTASDSVTATVPVVMVKASTRVTLDTPEVVCTNRLITGTLEVQKGGTMRGNIEHTGGELSSNGKVLHTHKHPGDSGGTTGSPL
4453654..4454001                   PHAGE_Entero_fiAA91_ss_NC_022750: putative baseplate protein; STL3553_c43880; phage(gi557307598)     6.00e-79            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MTARYLGMNRSDGLTVTDLEHISQSIGDILRTPVGSRVMRRDYGSLLASMIDQPQTPALELQIKVACYMAVLKWEPRVTLSSVTTARSFDGRMTVTLTGQHNDTGQPLSLTIPVS
4454006..4454914                   PHAGE_Entero_fiAA91_ss_NC_022750: baseplate assembly; STL3553_c43890; phage(gi557307588)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MPIIDLNQLPAPDVVEELDFETILAERKATLISLYPEDQQEAVARTLTLESEPLVKLLEENAYRELIWRQRVNEAARAVMLACAAGNDLDVIGANYNTTRLIITPADDSTIPPTPAVMESDTDYRLRIQQAFEGLSVAGSVGAYQYHGRSADGRVADISVTSPSPACVTISVLSRENNGVASEDLLAVVRNALNGEDVRPVADRVTVQSAAIVEYQINATLYLYPGPESEPIRAAAVKKLEAYITAQHRLGRDIRLSAIYAALHVEGVQRVELTAPLADIVLNSTQASFCTEYRVVTGGSDE
4454907..4455518                   PHAGE_Entero_fiAA91_ss_NC_022750: baseplate assembly; STL3553_c43900; phage(gi557307599)     3.25e-103           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MSDSRLLPTGSSPLEVAAAKACAEIEKTPVSIRELWNPDTCPANLLPWLAWSFSVDRWDDKWPEATKRAVIRDAYFIHCHKGTIGAIRRVVEPLGYLIEVREWWQLNEEPGTFRIVVGVLEQGITEEMYQELERLVADAKPASRHLTGLAISLSTTGNIFAGAGCYHGDALMVYPYTPEAIIVGGDYFPASAIHLIDNLRVNA
4455515..4456981                   PHAGE_Escher_pro483_NC_028943: tail fiber protein; STL3553_c43910; phage(gi971758531)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MTVKYYAILTNQGAARLANATMLGSKLNLTQMAVGDANGVLPTPDPAQTKLINQKRIAPLNLLSVDPNNQSQIIAEQIIPENEGGFWIREIGLYDDEGVLIAVANCPETYKPQLQEGSGRTQTIRMILVVTNTEAITLKIDPSVVLATRKYVDDEVLELKLYVDDQMRNHIAAQDPHTQYAQKHNPTFTGEPKAPTPAAGNNTTRIATTEFVQAAVTALINGAPATLDTLKEIAAAINNDPKFSTTINNVLSGKQPLDETLTHLSGKDVAGLLAYLGLGETINLARNAVPATRRINSKPLTGDITLWASDVGALPIAGGRLNGALGIGADNALGGNSIVLGDNDTGIKQNGDGVLDIYANSAHVLRFISSLVESMVSLKVNGNAVATGEVQAGNGSSRMTNNGDIFGSVWGNSWLSLWINNNFVADVQLGAGTSVTTWNNAGSWPNTPGYVVTSVWKDNQGENIDGINYAPLQKRVGNQWYTVQGGTT
4456981..4457568                   PHAGE_Salmon_SJ46_NC_031129: membrane-associated initiation of head vertex; STL3553_c43920; phage(gi100034)     1.53e-118           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MKKYQDIKNFRLIDAPVNRGKTQSEINIGAYFLESEDGQDWYECQSLFSDDTAKIMYDPEGVIWSVVNQPVPQRGNTYAVSMLWPVNMSVAEIDAADCPDDCRGDGSWLYRDGQVLPVPVDYQAKAETTRQKLLNDANNVIKDWRTELTLGIISDENKVTLINWMGYINKLKDIDFSQVNDEATFEKIKWPELPK
complement(4457573..4458106)       PHAGE_Entero_P88_NC_026014: tail fiber assembly protein; STL3553_c43930; phage(gi744692740)     8.18e-82            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MMHLKNIVAGNPKTPDQYQLTKKFGVVWLFDEDGKNWYEEQKKFSADSLKIAYDKNNVIVDINKDVSAINPDGCSVVELPDITANRRADVSGRWMFNGEQVSKRVYSPEELRQQAEAKKQKLLEEAEVVIKPLSRAVKMGIATDEERKRLEAWELYSVLVSRVDSSDPDWPEKPASQ
complement(4458109..4458741)       PHAGE_Salmon_ST64B_NC_004313: tail protein; STL3553_c43940; phage(gi23505468)        1.20e-75            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MGALPIAGGRLNGALGIGADNALGGNSIVLGDNDTGFKQDGDGVLGIYANNARIGYIDNSGLHMSVNVLTNGGIRVGDGKQFSLTSNNNSTMTATFNLWGGADRPTVIELDDDQGWQFYSQRNTDGSISFRVNGQMEPNSYSNFDSRYVQDIRLGSLQYGQVWNGPGFSDTSGYVITGITNGNSDELVDGAHRRPIQKLIGNQWYNVVSI
4458913..4459506                   PHAGE_Escher_pro483_NC_028943: DNA invertase; STL3553_c43950; phage(gi971758535)     1.09e-138           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MLIGYVRVSTNDQNTELQRNALECAGCELIFEDKISGTKSDRPGLKKLLRTLSEGDTLVVWKLDRLGRSMRHLVILVEELRERGVNFRSLTDAIDTSTPMGRFFFHVMGALAEMERELIVERTRAGLEAARAKGRIGGRRPKLTASEWEQAGRLLAAGKSRQRVALIFDIGLSTLYKKFPSSAIKNKLCHPLANRDK
4459566..4460756                   PHAGE_Entero_fiAA91_ss_NC_022750: major tail sheath; STL3553_c43960; phage(gi557307603)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MSDYHHGVQVLEINDGTRVISTVSTAIVGMVCTASDADAETFPLNKPVLITNVQSAIAKAGKKGTLAASLQAIADQSKPVTVVVRVEDGTGDDEETKLAQTVSNIIGTTDENGQYTGLKALLAAESVTGVKPRILGVPGLDTKEVAVALASVCQKLRAFGYISAWGCKTISEVKAYRQNFSQRELMVIWPDFLAWDTVTSTTATAYATARALGLRARIDQEQGWHKTLSNVGVNGVTGISASVFWDLQESGTDADLLNESGVTTLIRRDGFRFWGNRTCSDDPLFLFENYTRTAQVLADTMAEAHMWAVDKPITATLIRDIVDGINAKFRELKTNGYIVDATCWFSEESNDAETLKAGKLYIDYDYTPVPPLENLTLRQRITDKYLANLVTSINSN
4460769..4461287                   PHAGE_Entero_fiAA91_ss_NC_022750: major tail tube; STL3553_c43970; phage(gi557307604)     1.05e-124           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MAMPRKLKLMNVFLNGYSYQGVAKSVTLPKLTRKLENYRGAGMNGSAPVDLGLDDDALSMEWSLGGFPDSVIWELYAATGVDAVPIRFAGSYQRDDTGETVAVEVVMRGRQKEIDTGEGKQGEDTESKISVVCTYFRLTMDGKELVEIDTINMIEKVNGVDRLEQHRRNIGL
4461344..4461619                   PHAGE_Entero_fiAA91_ss_NC_022750: tail protein; STL3553_c43980; phage(gi557307605)     4.29e-57            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MNKENVITLDNPVKRGEQVIEQVTLMKPNAGTLRGVSLAAVANSEVNALIKVLPRMTAPMLTEQEVAALELPDLVALAGKVVGFLSPNSVQ
4461764..4464211                   PHAGE_Entero_fiAA91_ss_NC_022750: tail length determinator; STL3553_c43990; phage(gi557307606)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MSNNVKLQVLLRAVDQASRPFKSIRTASKSLSGDIRDTQKSLRELNGHASRIEGFRKTSAQLAVTGHALEKARQEAEALATQFKNTERPTRAQAKVLESAKRAAEDLQAKYNRLTDSVKRQQRELAVVGINTRNLAHDEQGLKNRISETTAQLNRQRDALARVSAQQAKLNAVKQRYQAGKELAGNMASVGAAGVGIAAAGTMAGVKLLMPGYEFAQKNSELQAVLGVAKDSAEMTALRKQARQLGDNTAASADDAAGAQIIIAKAGGDVDAIQAATPVTLNMALANRRTMEENAALLMGMKSAFQLSNDKVAHIGDVLSMTMNKTAADFDGMSDALTYAAPVAKNAGVSIEETAAMVGALHDAKITGSMAGTGSRAVLSRLQAPTGKAWDALKELGVKTSDSKGNTRPIFTILKEMQASFEKNRLGTAQQAEYMKTIFGEEASSAAAVLMTAASTGKLDKLTAAFKASDGKTAELVNIMQDNLGGDFKEFQSAYEAVGTDLFDQQEGALRNLTQTATKYVLKLDGWIQKNKSLASTIGLIVGGALALIGIIGAIGLVAWPVITGINAIIAAAGAMGAIFTTVGSAVMTAIGAISWPVVAVVAAIVAGALLIRKYWEPVSAFFGGVVEGLKAAFAPVGELFTPLKPVFDWLGEKLQAAWQWFKNLIAPVKATQDTLNRCRDTGVMFGQALADALMLPLNAFNKLRSGIDWVLEKLGVINKESDTLDQTAARTHAATYGTGGYIPATSSYAGYQAYQPVTAPAGRSYVDQSKNEYHISLTGGTAPGTQLDRQLQDALEKYERDKRARARASMMHDG
4464226..4464705                   PHAGE_Escher_pro147_NC_028896: tail protein; STL3553_c44000; phage(gi971753720)      6.45e-112           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MMLALGMFVFMRQTLPHQTMQRESDYRWPSNSRIGKRDAFQFLGVGEENITLAGVLYPELTGGKLTMTTLRLMAEEGRAWPLLDGSGMIYGMYVISRVSETGSIFFADGTPRKIDFTLSLTRVDESLAALYGDIGKQAESLIGKAGSMATRFTGMTGAG
4464705..4465868                   PHAGE_Entero_fiAA91_ss_NC_022750: putative phage control protein D; STL3553_c44010; phage(gi557307608)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MLDALTFDAGSTLTPDYMLMLDSRDITGNISDRLMSMTLTDNRGFEADQLDIELNDADGQVGLPVRGAVLTVYIGWKGFALVCKGKFTVDEVEHRGAPDVVTIRARSADFRGTLNSRREGSWHDTTLGAIVEAIASRNKLEASVAPSLAGIKIPHIDQSQESDAKFLTRLAERNGGEVSVKMGKLLFLKAGQGVTASGKKIPQITITRSDGDRHHFAIADRGAYTGVTAKWLHTKDPKPQKQKVKLKRKKKEKHLRALEHPKAKPVTQKKAPKVPEAREGEYMAGEADNVFALTTVYATKAQAMRAAQAKWDKLQRGVAEFSIILATGRADIYTETPVKVSGFKRVIDEQDWTITKVTHFLNNSGFTTSLELEVRLSDVEYETEDNE
4465914..4466168                   PHAGE_Entero_fiAA91_ss_NC_022750: activator of late transcription; STL3553_c44020; phage(gi557307609)     9.07e-50            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MALSTKPEEVLAMFHCPLCQHAAHARTSRYITDTTKERYHQCQNVNCSATFITYESVQRYIVKPGEVHAVRPHPLPSGQQIMWM
4466280..4466326                   attR                                                                                 N/A                 GACACCATCCCTGTCTTCCCCCACATGATGTGGGGGTTTTTTTTATC

#### region 11 ####
complement(4613034..4613762)       PHAGE_Salmon_SJ46_NC_031129: baseplate hub subunit; STL3553_c45300; phage(gi100101)     6.87e-39            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MIIVSVLRQSKDFTTKHAQWLHKQLKGYDSVCLTDALKIKGVNTAPLLYDWPGWWAKLELFNPLHPVLGNEDILYIDIDSVIVGDITPLTTMKKITLLNDFSQHGASVAPATGIMFIPAPAKKNVWDEFMKNPEKEINAIRTPPYHGDQGFIGRICQDAERWQNILPGRIISYKANIATPKMIGFNPELYDGTGNGKLPDGASIVCFHGSPRPWNTALPWVPYFSLKNTIQSKVKQYKLSLR
complement(4614498..4614953)       PHAGE_Haemop_SuMu_NC_019455: enoyl-CoA hydratase/carnithine racemase-like protein; STL3553_c45310; phage(gi418489075)     2.37e-28            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MSQTTVWLACYKGRSEHRGIARFADWLTRKVTRGIYSHCELAVAHGGNEYLCYSASFRDRGVRGKIIPLPDDKWDKLPLKATLPEVEVFFRKHNGKRYDWQGALGIALYNRERKDRLFCSEFCAEFLGLNDSWRYSPSHLYALVSSWQYDC
complement(4614950..4615555)       hypothetical protein; STL3553_c45320                                                 N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MTQYAYYHPATFEVIDWIDTSSLNVVLPDSVISIDDEQWRLRDKNCWVCLNPLEFITTPPPGKFYRLQGNEWVYDEALFVSALESVKAQVIQAIKAHRDDVTADYIVIDGNHFHSDANSRIQQMSLTRMGQAQQIPAGLMWQAKNNGLIELTNDIAAQFETVTMDHDMRLFANAQRHIAAVEALEDIEAVLDYDYSTGWQP
complement(4615560..4617305)       PHAGE_Salmon_SP_004_NC_021774: phage tail fiber protein; STL3553_c45330; phage(gi526003631)     3.56e-85            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MDNEFYTLLTDRGMAKIASALADKKQLHLQKMAVGDGGGQYYEPIASQTKLRHEVWRGEMNTLTVAPNNPNWLIAELVLPEDVGGWYVREVGVFDDEGELIAIGKFPESYKPLLPGGCGKQVCIRLIMEVSNTTAVTLTVDPSIVLATRDYVDTRLDEHEHSTNHPDATLTQKGFTQLSNATDSDDETKAATPKAVKAAMAEARNHTHTWNQITGVPDGTLTQKGIVKLNSATDSTSTTEAATPSAVKAAMDKANAAAPANHTHVWNQVTGVPDGTLAQKGIVKLNNATDSTSTTEAATPSAVKAAMDKASAAAPARHTHAWGQITGAPDGTLTQKGIVKLNNATDSTSTTEAATPSAVKAAYDKASAAAPANHSHYQFFTANGTFTVPDGVTQVFVEMLGGGGGGGGGGHTSNTDGLLYCSGGNAGKSGEPEIAIVPVIAGNNYPVTVGAGGASGAGGVLPNSNPTGNVVQVGQAGNSGINGGNSIFIDVVANGGAGGAGGIVQSRIPLSGFNQLDSISGGNAETTFFGKGGTGAVLSNGSNASGYGAGGGGGASVNSLNIALSGYAGGRGSSGFVKISW
complement(4617308..4617940)       PHAGE_Burkho_BcepMu_NC_005882: gp51; STL3553_c45340; phage(gi48696961)               5.82e-32            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MDKLLLPPPLASDERFSILANIAAERFAQIDLTALLVYLVDIVDASALPSLAEQFHVQGLEGWLFAANEQEKRELIKQAIELHKYKGTPWAVRRVLEILSLPGTISEWFEYGGKAYFFKVEIKLINQGMDENLFNNLVDLIHEYKNVRSKLEALIVWIINQSAIPVIGSALYGGEITTVLPFQVLEVQQTKPIYFGTGQWSLEITSIYPE
complement(4617933..4619048)       PHAGE_Burkho_BcepMu_NC_005882: gp50; STL3553_c45350; phage(gi48696960)               2.60e-132           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MAIAEPDFIDRDPAQITSEMIAQYEEASGKKLYPAQAERLLIDLFAYRENLVRIAIQEAAKQNLVAYSRAPMLDYLGELVGVHRLPAQAAKTTLQFSVTQAAKSNLVIPQGTRASASDSVMFATDEDVLLPAGSLSVAVTATCVVTGEPGNNWQPAQISALVDRVGNYDISVTNLTASSGGCGEENDDALRKRIQLAPESFSNAGSYGAYRFHTLSVSQSIIDVAVLGPDEGLAEGCVELYPLTLNGLPGPELLAQIEREVSKEKKRPLTDKVSAKCSPRVAYQISARLTLFTTADQETTLAAAREAINTWTRSRQTRLGQDIVPNQIIKVLQVDGVYDVALDMPAKKVLQAHEWAECTAIDVTIAGVSDG
complement(4619039..4619398)       PHAGE_Burkho_BcepMu_NC_005882: gp49; STL3553_c45360; phage(gi48696959)               3.63e-43            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MNTKTRPSTLHWQPALQRPEEYVCGLDDIHQAIHIILRTPRGSDPHRPLFGSNLWRYIDYPIERAIPHVVRESVEAIRMWEPRCRLLKVTPTIDGEHLTLRVQWRAADGVINSTEVLWR
4619459..4619581                   hypothetical protein; STL3553_c45370                                                 N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MAGSECVLPGGASALTGPVLMHILLNGEDRVLRKVKMKLL
complement(4619562..4621100)       PHAGE_Salmon_epsilon34_NC_011976: GtrC; putative membrane protein; STL3553_c45380; phage(gi221328637)     1.15e-61            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MLKILPKTAMILLAFLAIFLIEWYTPIHSDDYRYYLLGISPESHFHHYMTWSGRIIADYTSALILYTRSQLVYSISAAVSTLVFCYFIVKTPSGTLRWNKSDYLLFPLIFFTYWISNPNLGQTTFWIVGAANYLWTNLFVVAWLFFFYTITIKNSKAISPWVALLSFMAGCSNESVSPFVSLISVLAIAYELWQNKSVSRNKIVYSLCAIAGSCVLILSPGNFIRASGKEFWYGRPIFERIFIHLTERVHNHLALIWIAYVVLLLLVLLVIFNKQIRAKIDKTSLICAALVVCIGIGTSLIMFASPSYPDRVMNGTFMFFLLAISFIAYALLKSGVKAGVVGVTAVTVLCGIVFLWSYSLMLNGYKKTAGQEIVRQKIITKEIAAGKQKFIIPDYYFVKLQNSGGHFGLFHDPAVYGEYYHVQAIFKKKVNFDYSVIANGAKHSLSNETTAYSNTRGDFAIISREQLTGSITLSVNGRQKTIPVEKMKHAEINDEFWYYASVDKGEITAISF
complement(4621109..4622038)       PHAGE_Entero_SfV_NC_003444: bactoprenol glucosyltransferase; STL3553_c45390; phage(gi19549012)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MKISLVVPVFNEEDAIPIFYKTVREYSSLKPYNVEIIFVNDGSHDATESIISALAVADPLVVPISFTRNFGKEPALFAGLDHATGDVVIPIDVDLQDPIEVIPHLINKWQAGAEMVLAKRIDRSTDGHLKRKSAEWFYRLHNKISTPKIEENVGDFRLMSREIVENIKLLPERNLFMKGILSWVGGQTDVVEYARAERVAGNSKFNGWKLWNLALEGITSFSTFPLRIWMYIGVSVSALSLIYAMWMIIDKLMWGNPVPGYPSLMTAILFLGGIQLIGIGIMGEYIGRVYTEVKQRPRYIVKNKKTMME
complement(4622035..4622397)       PHAGE_Entero_SfV_NC_003444: putative flippase; STL3553_c45400; phage(gi19549013)     2.68e-59            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MIKLFIKYVSIGVLNTALHWAIFALCVYGFQTSQALANVAGFAVAVSFSFFANARFTFGASVSTGRYLLYVGFMGVLSAVVGWTGDKCAMPPIFTLIVFSAISLICGFLYSRFIVFRNEK
complement(4622591..4622716)       hypothetical protein; STL3553_c45410                                                 N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MLLDGGFALSSLQKVHKHRPGKRRSATGQIAGGYLFSAQRD
complement(4622725..4623447)       PHAGE_Burkho_BcepMu_NC_005882: gp48; STL3553_c45420; phage(gi48696958)               3.31e-38            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MKGVTRQTGIISDIDEAVVRVRVTLPECDNLRSNWLAVLQRNTQDNKDYWLPDIGEQVEVSLDDNGEDGVVLGAVYSSVDTAPLASRDKRYVQFSDGAAFEYDRALHQLTVNGGIEKIVIEVKEHTQLTSPQVEVRAQHVTVISETVDVAATSVGVKAVDVNVEAPHTGIKALNVTVDAPLSTFTGDVTVMKKLTWLGGMAGSGGVGNSAVITGNVNVLGNVNASGTLMDNGGNSNHHSH
complement(4623457..4624500)       PHAGE_Burkho_BcepMu_NC_005882: tail protein; STL3553_c45430; phage(gi48696957)       2.05e-101           SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MAEITVSGGVFATLTPIFTLWYGHKEITYDIAPYVTSISYSDSIKNESDVIAIALEDSTGRWVNEWYPGKGDTLALRLGYQGEDLLDCGIYVIDKIDISAPPSTVNIDGIATSVSKALRTKNSQGFEETTLSAIASRIAQKHGLTLAGKIAPLTIDRVTQYAETDVAFLKRLASEYGYTVKVTATELIFSHLPTLRCLAPVKTLRRTDVSHYTFKDTINRIYKNATVQHQNSKQKELVIYTHDSQEKTSARGAATSADTLKINSRAPDTGAAQAKANAALDSHNEYQQTGTLSLMGCPQLTAGNKIELSDFGVLSGQWLIDKSMHKLTRSGGYTTEIDISRGPATSQ
complement(4624488..4624697)       PHAGE_Burkho_BcepMu_NC_005882: gp46; STL3553_c45440; phage(gi48696956)               6.98e-23            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MRYLEHVTTDGERWDNLAWRYYGDALAYERIIAANPHVAIMPVLPSGVRLIIPVISVTQTTPELPPWLR
complement(4624697..4625650)       PHAGE_Burkho_BcepMu_NC_005882: gp45; STL3553_c45450; phage(gi48696955)               5.01e-50            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MYAVLGEIEFDVVAYWDEFESTMGVDYTSHARIEGKPGVQFIGDKLDKITLKFNFHSQYCQPTTELNRLREAMTAHQAMALVFGNGDYRGWFVITDLTATHQHTDPYGNVIAQGGSLSLQEYTGDPKSPLLPPAITTQEPNIDEMLDELPDVNDSWFDELLSVVEEGMREAKEMMDEVADAIDDIKKTIAQAKELVKEAKALKEKCGDIVDSLKKTMSSIDALFQQPLDLQTLAGLPKALAAKMQELIDSLPGIRECAGDAGTLIEHAESLFDAITSSVAEATYDSAATLVNQARGTLQTSAPDVSQLAAADITRSL
complement(4625650..4628004)       PHAGE_Burkho_BcepMu_NC_005882: gp44; STL3553_c45460; phage(gi48696954)               7.55e-61            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MANDIITQLQARNETLTQAIARYGSLNASTLHTLSFEQTKVTRLTQQLANSALRREENDKQRAGLLEKTQTFAGQLGKLLNVETPDWKLPYEFQGNMVDMAAKGGMDNTARDALSLNIRDWSLDFNQDQKDLQSTAATMIEGGVSALQDLSRYMPDIAKAATASRDSAQSWAQAALATRDKLNIAPDDFRFAQNMLYSVAKSGGGSVAEQTQWINAFAGKTGAQGKEGIAELTATMQIAMKNAPDAGAAAANFDHFLKSAFSKETDSWFARQGVDLQGSLLEHQQNGIGVTEAMTHIVQMQLEKMNPQILDTFRQTMKIEDLSARGDALQAMVEKFNLGAMFGDAQTRDFLAPMLANMDEYRQLKASAMQAAGQHVIDDDFAAKMTSPGEQTKALQLSLNDLWLTVGLELMPAIGELAQSITPLVRQFSAWLRENPALVQGVAKVVSVIWLFNGALNILRLGANLIASPFIRLIDIFLKVKAGLALGGGSRALSVLKSFGNGAKSLTMLLGNGLIKGLRLVGQTFIWLGRALLMNPVGLTITAIASAAYLLYRYWEPISGFFAGVWERIKTAFDGGIAGVTRLILDWSPLGLFYRAFAGVLDWFGIELPASFSEFGGNILDSLINGILNALPFLSGAIEKIKALIPDWAKSALGISAEMPSVAAAVPGIAGTMVAQQASAPLASGAKAVTTSAKTMASPQPVKTKSAATPPTPAALPGKSGGKPYTLPSRAQSNVQVHFSPQVTVQGSGANAAKDINNVLSLSKRELERMINDVMAQQRRREYA
complement(4628101..4628229)       hypothetical protein; STL3553_c45470                                                 N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MALLARWFRFPPSEIDALSVDDFTCWLDEASAQIKHEYDSQA
complement(4628189..4628506)       PHAGE_Burkho_BcepMu_NC_005882: gp41; STL3553_c45480; phage(gi48696951)               1.91e-10            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MNEKYTLQFPFTSAAGERIDVLQLRRLKVKDMRAARRASDKPEEWDEPLMAAMTGLVTEDLAEMDLLDYQALQKRFQSMLSMATEPTATVAGNGAAGEVVSLSAQ
complement(4628558..4629082)       PHAGE_Burkho_BcepMu_NC_005882: gp40; STL3553_c45490; phage(gi48696950)               6.46e-90            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MAGKIQINRITNANIYLDGNNLLGRASEIKLPDISMIMQEHKALGMVGKIELPAGFDKLEGEIKWNSFYHDVMRKTANPWQAVALQCRSSIDCYNSQGKADQLALVTHMTVMFKKNPLGTFKQNENPEFSSAFGCTYIKQVVDGETLLELDYLANIFRVNGADQLNAYRNNIGG
complement(4629082..4630509)       PHAGE_Burkho_BcepMu_NC_005882: major tail sheath protein; STL3553_c45500; phage(gi48696949)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MAANYLHGVETIEIETGPRPVKAVKSAVIGLIGTAPCGPVNQPTLCLSESDAAQFGPGLANFTIPQALKAIYDHGAGTVVVINVLNPAVHKSTIPSETVKVDDNGQIQLKHGAVQTMNIGRSTNAGNAYIKGTDYTIDMLTGKITCMGTNLKPGVQAYVNYTYADPTKVTAADIVGAVNTAGDRTGMKLLQDTWNQFGFYAKILIAPVFCTQNSVAVKLIAQAEALGAITYIDAPIGTTFQQVLAGRGPQGAINFNTSSDRARLCYPHVKVYDSATNSEVLEPLSSRAAGLRAKVDLEKGFWWSNSNQEIQGITGVERSLSAMIDDPQTEVNQLNENGITTIFNSYGSGLRLWGNRTAAWPTVTHMRNFENVRRTGDVINESIRYFSQQYMDMPINQALIDALTESVNTWGRKLIADGALLGFECWYDPARNEQTELAAGHLLLSYKFTPPPPLERLTFETEITSEYLVSLESNR
complement(4630499..4630696)       PHAGE_Burkho_BcepMu_NC_005882: gp38; STL3553_c45510; phage(gi48696948)               2.55e-11            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MKYIYSGPASGVTLADGQEVLLWPNSEISLPEDNEWVITMIARRHLVPVVTQEVETNEEEIVHGS
complement(4630693..4631148)       PHAGE_Burkho_BcepMu_NC_005882: gp37; STL3553_c45520; phage(gi48696947)               3.09e-15            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553METLSVIHTVANRLRELNPDMDIHISSTDAKVYIPTGQQVTVLIHYCGSVFAEPENTDATVQKQLIRISATVIVPQISDAINALDRLRRSLGGIELPDCDRPLWLESEKYIGDAANFCRYALDMTASTLFIAEQESKDSPLLTIVNYEEIQ
complement(4631308..4631622)       PHAGE_Burkho_BcepMu_NC_005882: gp25; STL3553_c45530; phage(gi48696935)               1.58e-29            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MKLSIDFWEVISLLLSFVGLMFAAGKLLLAQIEKRLNERFEALEAARRESEAGWSRLEREFLEFRADLPLHYVRREDYLRGQAVLEAKLDALYSKIELIQRGNH
complement(4631635..4632240)       PHAGE_Pseudo_B3_NC_006548: endolysin; STL3553_c45540; phage(gi56692593)              4.19e-73            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MRYQYVCLVCAMTFLSADAAEPPRASLQWRNEVIRTAREIWGLNAPVADFAGQLHQESGWAPDALSPAGAQGMAQFMPATAKWVSQLYPELHENKPFNPAWAIRALVQYDRQLWKSVLAKNSCQRMAFTLSAYNGGQGWVNRDKKLAAAKGLDASIWFEHVERVNAGRSAANWRENRHYPKAILYQHAPRYLQWGQASCIH
complement(4632243..4632530)       PHAGE_Burkho_BcepMu_NC_005882: gp21; STL3553_c45550; phage(gi48696931)               3.91e-14            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MRKIIVPRLSGWLVASVVLFALIGWTSSAQIPVVIYKLSLVSLSAVLGYWLDRSLFPWARPDSFCPWEESLCCAAAMIRRAIIVAAICLAVALGL
4633106..4633453                   PHAGE_Burkho_BcepMu_NC_005882: gp01; STL3553_c45560; phage(gi48696911)               2.55e-30            SalmonellaentericasubspentericaserovarTyphimuriumstrL3553MIQKSKEMVRLPEIINDLAFHASQVLIESMNIDSASAENAGQAIADRMMRNWGGQSIYFPKGISGRASERDYQIYSECDGRNYAELAKKYNLTLQWIYKIVKRVHTEKQHQRRML
