gi|00000000|ref|AP014658.1|  Bifidobacterium longum DNA, complete genome, strain: 105-A. 2290145, gc%: 60.06%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
304164..304175                     attL                                                                                 N/A                 TGGACCTCTGGG
304267..305094                     PHAGE_Gordon_GRU3_NC_030935: hypothetical protein; BL105A_0243; phage(gi100017)      1.03e-63            BifidobacteriumlongumMRNKISAPVPWRESINGWTDTLRAAGLSAQTIKSRRYKMVHLATLLMPSGPEDVTTEQIVQAFARQQWKPETRKAYRNTISSFFRWLHKSGRRSDDPSLDVPRVKKPHAHPRPCPDRYIAAAMEKATSSEKLMIRLGAECGLRRGEIARVHSDDVVADSAGRSLIVRGKGDKQRIVPLPDDLAGIIMDARGYLFPGRFGGHVEESYVGDHISHLLPRGYAAHTLRHRFATTAYAATHDLFVVAELLGHESVETTEHYVAMPDGRLREAAAAVRLI
complement(305091..305441)         PHAGE_Lactoc_bIL286_NC_002667: holin; BL105A_0244; phage(gi13095803)                 2.19e-14            BifidobacteriumlongumMTDTTENRLPTASTTEVTVMPVSAQIQAATDDDAEASTPRIDGGTISRFLVLLLALVNQALTMFGHPVLNIDDTTITQLVSLAWTAGSAIWCYWKDNDVTKAARTKKARLSARHAA
complement(305438..306235)         PHAGE_Gordon_Waits_NC_042123: hypothetical protein; BL105A_0245; phage(gi100012)     1.72e-11            BifidobacteriumlongumMSDIIWKGSPNHYVGRNGYGVTHITLHIMVGYLAGTDATFASQSSRASAHYGIGATGEIHQYVSELDGSYSDANYESNNSTISIEHEGGMANGAVCTQECIDASARLCADIARRYGWTKLWHDGLKGNVWLHREIPGTDHLSCPDLAPNGLPYKQIIDKANQILEGGTMSNAGDEVWNWAYKPAGKNATPGGNMYNLLAYELPQRVRDSIMQYSYKGSAPGGNIYNTICFEIPGMLKQLTKTIETQQQQINELSEKISKLEGTTK
complement(306248..306478)         hypothetical protein; BL105A_0246                                                    N/A                 BifidobacteriumlongumMTDLIIAIVGAVGAVVGALVSTLSAAAKNKMEAYRLAQKMQADNQRLWQWNRQLIDHIYRRAPPPPPEPPEDLFND
complement(306475..307083)         hypothetical protein; BL105A_0247                                                    N/A                 BifidobacteriumlongumMTATTPIYGLSYPEGSDLVSSAAGSFKVMADTVEQALYTVDQRSTPAGATPVIATTLESLKAQTATVGQTGFVTSDGDNTGPYIWDGTSWHHAHWYTADDKAKTTLVNKSGWKCEYMMKHGFVYVTVNLSDSGTKGWSESQMPGTLPEEARPPLELNFAPMCSNNNSIGVFIVKPTGVIVYSRRGGGQISDSRYATMMWPAA
complement(307080..308585)         hypothetical protein; BL105A_0248                                                    N/A                 BifidobacteriumlongumMQQCFMFIDTGNGWTPVNDSAKDIAALDSFVIDWGSDSIDEQPEPAVMSFTLRDRTGRLAGQALTLVGMKVVVQFSNQPRWMDLTPAMGCWRDLRIPIDSLHKTYSPDSPDSPSETMFAGSVSTGGSIEPASDGGWLLKLSATSRMAIWKRLQSQGPTDTAAKWNGAHWIGTPSARLKEMNRRASAQGAPEAQLDGLALPSSVAPYTPSDHPSQLDLLHRLTVGPRLPQWHEVYDGAASTIRPLFLADPIAVHLSTDGRLNVLTDGETRYALSAADIEASTDLSITEPLTQVVINAKRVKSDNGKLSFDDVEITMGDQDRLPPQLTVMQKSLTVDSDMLAVDDSGGVWNSGGTSNVSDTDRANIAQWLESHDLRMVPETVTFNSTRIDPARRPWLYKASPSGPFIIVKAKSSALTGSDGRPSFTGPITTIGGTLSYRWRSGKPTLTQEATLAALRPLLTERITWADLPTLSWQQLDLHICDLSMIQIIDTSSPTAEKEGTQ
complement(308589..310457)         PHAGE_Lactoc_P1045_NC_049812: primase; BL105A_0249; phage(gi100047)                  2.72e-111           BifidobacteriumlongumMAHSAIMNVRITGNADDAVKAFEKTTTKAAAFGSAIGGLAVKGVTALWDTVKGFAGDVVNMSDSTDKFMNTMSFAGIDTKAVQAAAKETRKYADDTVYGLDDIQNTTAQLAANGIGNYMELTEAAGNLNAVAGGNADSFKSVAMMLTQTAGAGKLTTENWNQLADAIPGASGKLQEALLKNGAYTGNFRDAMSKGEITADEFNKALMDLGMTDVAKQAATSTSTIEGAMGNLEAAVTGGLTDAFNLFKPAVTGGINAASAAVTSLATTGVQGLQTFFGQVKDTGAFTSLQSAAQSVGGGLQSLWTGIMAVVNAMTGGQPAGTAFGNALNTVATAAQTVGGWLKTAGNWISQNLDLVTPLVAAIGGAVAAVTAVTTAMQVAAVAQAVLNAVMAANPIMLVITLIAALTAVLTYFFTCTNTGRAVWSSFTSFLGSCVQGITGFFSGLGSTIVGIFSSAANGARNAWNGVVGWFRGLPGTIGGFFSNAGSILVNAGASIINGFWDGLKGAWNNVTGWISGIGDWIKAHKGPISYDRRLLIPAGQAIMTGFAQGLNTGFDSNVETAIGRANRRLAAMPLNLSAQGNTATPAVINTWNVEINGEVIDKDGTAKAIKRLLADYDARRS
complement(310616..310888)         hypothetical protein; BL105A_0250                                                    N/A                 BifidobacteriumlongumMATTRITYTDGTSETVPITMRATCKAEAHAIDVGWGPITQSPVRSGAYAAYAALRMAGRNLPDFEHWLDTVASFDLAAAKEEPEEGNPTD
complement(310888..311253)         PHAGE_Arthro_Decurro_NC_028692: hypothetical protein; BL105A_0251; phage(gi966201226)     3.01e-20            BifidobacteriumlongumMVVGQKRFVQTMRKAGADMDDLKEVNRAAAQIALPAVRNLAPRGKTGRLAGSLRVGATKRAGVIRAGRKAVPYAGPVNYGWPARHIKPRLFVNNGVASTESQWQKVYKDFIDKTLKQVKGK
complement(311278..311691)         PHAGE_Arthro_Decurro_NC_028692: hypothetical protein; BL105A_0252; phage(gi966201225)     5.86e-17            BifidobacteriumlongumMAGKIRTLGPGIFKITDTENGRDFSADLTKAQLNPSNSSDDPTTYLDGSEETNTTTTWTFEGTVGDDFSEDGLAVWLFDHKGETLPAQFVPNNTGKIQWTFNVTIAPIAIGGDVKSKNTNDLSFAVTNVAHAPYTGK
complement(311712..312080)         hypothetical protein; BL105A_0253                                                    N/A                 BifidobacteriumlongumMNIQEQRAALMNTLTNMLDGLVSSVSIDAQLIRPAAGKVAVFIEPPTVEWPSWGPPEPVWTLDVIAGTPATQPSAVDDILTALDRLAERGLNIQKATPATWNLAGAGTLAAYQVVLNALETE
complement(312077..312409)         hypothetical protein; BL105A_0254                                                    N/A                 BifidobacteriumlongumMMIDDNILLQRLRDEVGVPAGEDERLTVKLAAAKRYVAHAVGTATVDDDLLADCIVSCAADLFNMRDARLGVMDVGDSTVEPFRISTDPLRSVWPKLRAAGVLTGGMVIA
complement(312406..313962)         PHAGE_Marino_P12026_NC_018269: phage prohead protease; BL105A_0255; phage(gi399528321)     7.60e-15            BifidobacteriumlongumMNIEKRTIAWKGLTLRSADDSGTSTVEGVAVPFGDIIDTWDGAETFDRDCSFEGLDEAKLCFEHGETIGRITKAESTDDGLHITARISDTARGRDAMTLIRDGVLDSFSVGFIPLESQKDRDGITHRRKVRLLETSIVSWPAYQNAKMTKSAAPAVEQRKETMENNNELMDLIQSMQEEQRGIKAEISKMGAKPAPAAIGAAYRSHGEYMQALARGDEQAMTVMKECRDLISTKDTGNTATWIADDLKLIEDRRKVSQLLTHDTLPATGMSMEYHVVTSDTTAVGKQETEGSELSFGKVAFGTKTADINTYGGYTSLSRQTIERSTTPMLNTAITALQNAYAKATEKAVRDHLYAEIKAQRDASSNANKIDAPQLANMTIDDWVSLIIDASELADDRNVSLTRLAVSKDVLKALVKLKDTGDRFFNLSGDGSDTIGSFDLTGVAGTFMRVPVVLLPNADAGLASFIDPAAVTVWESGGPAQLTDGNVTGLTNSYSVYGYMAVATTHADGLIPVKFAAA
complement(313959..315044)         PHAGE_Mycoba_MiaZeal_NC_028953: portal protein; BL105A_0256; phage(gi971759918)      2.10e-38            BifidobacteriumlongumMKLAGRVLTRGADGTDMPDGIKPPKRGPATEPLQLSTVFRGVQVLQTAITGLPIVEQRGGRDLPDVSPMVLQPDVSRSRRDFIADIVASLVLDGNAFTRIVRDWKGEIVTCEMLPPQYVTVTDESDDPARPDLRFSYLGHAYTADDVVHSKFLNVPGRLRGLGPISAAREEIDAAQLARDYKARFFTDGSNLKGYLRTSENITQEAAQQAKASWKASGEAGDIKVVGKNLEYVPLSLKPADLQFLETQKFDTTQIARLLGIPASIMLAAVDGSNLTYSNIEQSWIEFADYTLAAYTGEIEEIFNRLLPRGRTAKFDWDSSQRANMSDRYTAYKTAIEAGFLTVDDVRRKEGLPALGKEEDQ
complement(315165..316610)         PHAGE_Arthro_Decurro_NC_028692: terminase; BL105A_0257; phage(gi966201219)           4.31e-38            BifidobacteriumlongumMTMLMRGGTKRDETRPTDGAIVARTAEMLGKPLLPWQRYVADVAGEIDPATGTYYYDRVVLSTPRQCGKSTLIDTEDTRNALLGPDRKIYYLAQTGKDAEKHFKDFVQQLSKSKLAPFALKPRLSNGGMEQRFRNGSFICPLAVTKVAGHGTQMDKFTIDEAFSLDDETGKLILDGMAPTMNTRLHFTGVQPQIWITSTEGTADSTFLNGLLDSFRAGNVPKRTCWFDFGIPDDADPEDFQTILKWHPAAGLLWDIRQLRDFREQFAGNEAGWARAFGNRRDNGVAERVIPDQLWQSTLATPITPDRIDGRPVVIAAAVDVDATNTSVSAAIVNTDGTVTVQLLEVLDGTGMAPAEITRICDTYHAPLVMDCKGPNADLHDRLASMTDEAGDPLIDFIAMQSSDYLAVGQAFVSGLRNKLIRHAADTELDASAANCARTWSGDAWRVTRRGSTGLTSPIESCMLAAWGAHHLPSDGTLQIF
complement(316607..316927)         hypothetical protein; BL105A_0258                                                    N/A                 BifidobacteriumlongumMNQGTLEGFEEYTHPYGISGLQEQATMNLIKSFVDGKTLTPEATYICKSMLSIARNIDIQNSKGREISRNMTSLLTWFQELKAMYPEQPQLDPTLTDFISDAKAGL
complement(317037..317744)         PHAGE_Rhodoc_ReqiDocB7_NC_023706: HNH endonuclease; BL105A_0259; phage(gi593775988)     3.38e-08            BifidobacteriumlongumMRRQTVDPRIRAKVIATYGNRCWLGMPGCSITATEDDHIVPYSHGGRDTVANLRRACKHCNAMRQDRVLSGYGATLHAVIGPPRADFGMAMQSMLRRDSIVVSFDSLLRDLCPTQSKATDGLRLAAAMAWDGAARTLAKSSEPLDVWLVRTLPRSRRHPDMLAEWLALDYDVHVIETPADSTFALDLTPQEYRTAQQWYALHLTQQAVDARLAARRQRLAALGLRRDSPAARPRW
320911..320922                     attR                                                                                 N/A                 TGGACCTCTGGG

#### region 2 ####
complement(494748..495581)         PHAGE_Bacter_Diva_NC_028788: transposase-like protein; BL105A_0418; phage(gi971743572)     1.39e-55            BifidobacteriumlongumMIRSNAGRCPISAQCRILGVAKSTYYWMLEHPEAERADPYEKDVERVWRDSGKVYGARKIKHALGHEGVTLSRRRVNRIMKRNGMASSYSKAAYRPRPARPNDDPAPSILAREFDGYAPRTHLASDPAYVRVGSSWAYVCLPGDLANRQIAGHSVGVRHDADLVPAAFAALRFPLDEIEVFHTDRGGEFTGERIERMLDVFGITRSLSRPGNPYDNAVVESTNRLVKKELIHRNVYTNVEQLRSDVNRYVWWYNHRRLHSTLGYLSPVEFTQQGKTL
complement(495677..496438)         PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposition protein; BL105A_0419; phage(gi557307613)     6.26e-43            BifidobacteriumlongumMNTKTDEGLYEKARKLFISKASIDEFAGWATPRQVDAVHRLLDTELANRERAKHDRLLRRARFPVVKGLDGYDFTNVRLPDGYMLDELLGLGFIPRAQDLVFYGKTGRGKTHLAIGLGMKAIDMGLGVRFHQTAELVLQLGKAKRDGTLETMLRDIGRADLIILDEFGYVPFDIDGARLLYQIIAGSYERRSIIFTTNIEFSKWGTVFADDKLAAAIIDRIVHHGRLLEFTGQSRRVSEALMFGRNTSAQPEK
complement(496435..497928)         PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposase; BL105A_0420; phage(gi557307612)     2.47e-13            BifidobacteriumlongumMISMPQVQSIRRLRRNGESVASIARKTHVSEPTVRKYLAKEDLSAVPSVRKPRASVIDPYLPVIEQWLAEDRANWRKQRHTATRIWERLRDEHGAEVSLSTVTRAVARLRREFAAERDEAFMDLVWHPGEAQADFGEVDVLLRGVVQRMHHFVLDFPYSNVGLVQLMPGENAECTCLALRNLFEWLGGVPERIVFDNAAGVGHKGYGEREPRLTHLFQAFQAHYGFDCSFCNPYSGHEKGAVESKVGMVRRKLFVPRPSVWSLENFNAGLPDRCLELATKPHYRKDTEERGLFSEDRAALLPLPGKRFDVVTWRHMKADRYGVVTLEGRHRYSADRANAGRGVIVGLRALEVEVLDSSGKHLATHPRAYGQASTNSEDPSMQLALLCNKPASWPNSRVRDALPDPLREWLDRQDRQTRNEALQTLKRVDRESGWANAVEAMLSILESTGGADRAGVTLLAARLAEGVAGIEYDDDRPDLSEYDIAFTADVGVQEGGR
498080..499648                     PROPHAGE_Escher_MG1655: IS150 transposase B; BL105A_0421; phage(gi16131429)          4.33e-60            BifidobacteriumlongumMAKYTREQRQRAVELYVKYEGCAADVIRELGYPSREALRMWHRDWLDEQGTGVSSQRGERYARYTEEQKRAAVDHYLTHGRRASRTMRQMGYPSKEVLASWIDELAPGERRIRRGPVPGELKRDAVLKVASGELSSREAAEAVGVDSSVVRNWKRQLLGDAKGLMVTKREPERGDSSQQDDPDALRGEIATLRADLERLRAEQRAMEIRLAIMKGAAELVGKEPGADPDNLTSREKTTLIKDISETLGVNAESLLKEVGIARSTYYYQLKAMRRPDKNANLLSLVREAFENSRRRYGYKRIHLELKSAGIIVSAKRIMRLMTSHGMVPVLKSAKRYSSYKGEIGGAPANLVNRDFHATAPNRLWVTDITEFSIPAGKVYLSPVIDCHDGMPVAWTIGTSPNAALANGMLRDACATLKPGETPIIHSDRGCHYRWPEWIRICTEHGLTRSMSAKGCSPDNAAAEGFFGRLKQEFFHKRSFRGVTIDEFTAMLDEYMVWYRDKRIKTEYGMSIMDKRIQLGLVA
complement(499611..500018)         PHAGE_Paenib_PBL1c_NC_048689: holin; BL105A_0422; phage(gi100034)                    1.70e-23            BifidobacteriumlongumMAGPNRPRHYEEEFKRQIVQLYENGKPSSQISAEYGIPRSTLQRWVQGIRNSGSTKAADNRTPEENELIELRKRNRQLEMEVDVSEQAAPVFCLCSISCCGLGVVTFCWTSLSVWSLVSVPDGFRRRARAGCVCP
500131..500799                     PROPHAGE_Ralsto_GMI1000: isrso11-transposase orfb protein; BL105A_0423; phage(gi17546155)     1.02e-48            BifidobacteriumlongumMHLELRSAGIVVSAKRVMRLMTAHGLVPLSESVKRYSSYKGEIGGAPANLVNRDFHAANPNRLWVTDITEFRIPAGKVYLSPVIDRHDGMPVAWTIGTSPNAALANGMLESACATLRPGETPIIHSDRGCHYRWDEWIRICKSHGLTRSMSAKGCSPDNAAAEGFLGRLKQEFFHKRSFQGVSIDEFITLLDEYMVWYRDKRIKLEYGMSIMDKRIQLGLVA
501323..502345                     PHAGE_Entero_phi92_NC_023693: Phi92_gp067; BL105A_0424; phage(gi726647000)           1.84e-89            BifidobacteriumlongumMADEVFSPKNVIVTGGCGFIGSNFVHYVYDHHPDVHVTVLDALTYAGNLENIRGILGDRVEFVHGNICDAELLDRIVPGHDAIVHYAAESHNDNSIANPEPFLKTNVEGTFRLLEAARKYDVRYHHVSTDEVYGDLALDDPNKFTEETPYHPSSPYSSTKASSDLLVRAWHRTFGIRATISNCSNNYGPFQHVEKFIPRQITNILEGLRPKLYGNGLNVRDWIHTDDHSTGVWTILTKGRLGETYLIGANGERNNITVLKDILTVMGKSPDDFDWVRDRPGHDRRYAIDSTKLRTELGWKPTHTDFQKGLEQTIKWYTDNRAWWEPAKAATEAKYKQQGQ
502410..503279                     hypothetical protein; BL105A_0425                                                    N/A                 BifidobacteriumlongumMNVKKQADNAVMASRFLADARFQVYLDYARRHVDTVDRERLVDLAVRLYRWNVEASAITIGYIGYIEIFVRNAIDHRLCEWVSGQQITGIPDWLEAGKSDPIGRIRALINSPERDYIAEARNTALRKQRHWRSDQTHPRHGDAVTRDDVFSQLTLGTWDGMLSRSGKDPELAHVLMGAFPNIADAWASELRRMPKGRLPGNDGDPFEDRLRKELVDRLKSVRTIRNRIGHDENLLRVEFAKLRYDMFFILDALGPECPNWAFPDKGEALKTLNPARCIATWQNDSEDGK
503287..504744                     PHAGE_Escher_ESCO13_NC_047770: hypothetical protein; BL105A_0426; phage(gi100085)     1.22e-28            BifidobacteriumlongumMSFEFEKDLKVEETNIPGLLVFDLPVHGDNRGWFKENWQRAKMTALGLPDFGPVQNNISFNATKGVTRGIHAEPWDKYISIAAGEIFGAWVDLRPGESFGQVYTTRLDPSRAIYVPRGVGNSFQALADGTVYTYLVNAHWSLEQKKTYTFVNLADPELDIHWPIPLEESERSEADLHHPMLRDAKPMEPKRTLVTGCNGQLGRAVRAYAEAHGLRGFEYTDIDEFDFSDPAAYDKYDWSLYGTIINAGAFTAVDRAETAEGRPVAWKANAQGPALLARVAKDHHITLVHVSSDYVFDGTADLHSEDEAFAPLGVYGQTKAAGDIAVANAPEHYILRSSWVIGEGRNFVKTMMALSNRVADPDDQLGQVTVVDDQYGRLTFTKDMAEAIFHLLDSHAPYGTYNLTGSGAVKSWAEIAREVFDLTNGNGDKVKPISTSEYFANATSPVSPRPVHSALDLAKIEAAGYTPADWEETLKEYVTRELNKR
504768..505667                     PHAGE_Entero_phi92_NC_023693: Phi92_gp066; BL105A_0427; phage(gi726646999)           1.16e-124           BifidobacteriumlongumMKGIILAGGSGTRLYPLTTVTSKQLLPVYDKPMIYYPLSVLMLAGIRDILIISTPKDLPNFEKLLGDGSHYGVHFSYKVQPSPDGLAQAFLLGEKFIDGEPCALVLGDNIFYGNGLGATLRKAVAKAEGGEGASVFGYYVDDPERYGVVEFDEYKKAVSIEEKPKEPKSHYAVTGLYFYDERVVEFAKRVRPSARGELEITDLNKMYLEDGSLNVRTLGRGYAWLDTGTMDSLYEAGEFVRTVQRAQGLPIAIVEEIAYENGWISKEELLESAERYGKSPYGKHLKDVAEGKVVIVPND
