gi|00000000|ref|AP014956.1|  Staphylococcus capitis DNA, complete genome, strain: TW2795. 2479312, gc%: 33.05%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(1689028..1690410)       PHAGE_Staphy_PH15_NC_008723: phage amidase; JMUB0001_1581; phage(gi119967860)        0.0                 StaphylococcuscapitisMTNKTRAQAHAYLRKLKGYWWDFDGVYGAQCFDLANQYWYYVTGHALRGLYAKDIPFANNFDGYANVVKNYSSYVPKKGTLVIFPYEYGNGSGHVAIIESATQNYFYSLDQNWYGGAQNNPPEVAQTIYHEYHKDMYFIEPLYGKETIVSKTKARMVKPKPIKNVKKKKIMIVAGHGYNDPGAVGNDTNERDFIRKNIVDNVANYLKDAGHTVKIYGKKQDMYQDTAYGQRVGNHKDYGLYWVKSQGYDTVVEFHLDSAGPKATGGHTIIPAGYPANTIDKNIQNALKESIGVIRGITQRNDLLNCNVANDIGIDYRLVELGFITSNKDMKYIKKNLKPFTKSIASAINGKPIGGASAGKVKSVKKTWDWKGRFYPNTTIKVRKKPNGEIVEKGSWLYGKDDWVDVVQLYKDTKKKLWWGKFKYPTNPNAGYFYCALGEITDKQERIKKEEKLYGKIKWK
complement(1690410..1690676)       PHAGE_Staphy_CNPH82_NC_008722: putative phage holin; JMUB0001_1582; phage(gi119953707)     2.48e-46            StaphylococcuscapitisMKIDNGTLVRTILLILAWVNQILAMNHISPIPVDEMTISTVITGVFSLWAWWKNNNFTHAAKKGQEKIHEVKAGTENTNGKAPIGGNE
complement(1691110..1691532)       PHAGE_Staphy_StB20_NC_019915: hypothetical protein; JMUB0001_1583; phage(gi431809787)     1.35e-13            StaphylococcuscapitisMDKQKDTKGLLLFVAIEGIAGLGFSRGFFFAKEQENVLSDSDFYLALHHILPIWIWGIIMMIVSLILGLSAYFIPKHHINNTCNWLLFIGGFGSAFVYFLMTSASIYHAINWLSTLQFTIFTIVCGIIGFLGGADLYDRK
complement(1691694..1692050)       PHAGE_Staphy_vB_SepS_SEP9_NC_023582: hypothetical protein; JMUB0001_1584; phage(gi589891452)     3.62e-29            StaphylococcuscapitisMDFKQVYLTNGQPYLAFKGEDGEYQYPKDEWTETPPPAGGYQPMHFDGNKWVCATREEWLKSQKPVEVKPDATSETIAQLLMNDLEHNARLEMLEQAIAGLTNQLLQQQEEITNVRNS
complement(1692065..1693783)       PHAGE_Staphy_6ec_NC_024355: minor tail protein; JMUB0001_1585; phage(gi658310356)     0.0                 StaphylococcuscapitisMQDEIKKVGRLTLYDEPYEKTVSDSGIVFYNLDINTAVLEFTISKNNFPLQISDENVDTYVYLEGTDQNGNSYGRQLDVEYVDPFKGLVRLTVPDDYLKAVNNSTVTGQMYIGVHKGNRVPETKADTAVLNEFKFTVKDALINSVSAVTKIEYIRMFDKLKDEIKQRVKDIEDAIANGSDYVAQMKNVLADGLKQINTTVTQAKKDVNDTATNANNSITTTSNNAVNTVTQARDDVLNAIKNNQVVKTADLPNQFNALKWQKFQLTNDDGSIVTVKDVVDMNTLNNISNTGPYYCSNLINTPDGRSKFGYINVYNQGSSAGWAIYREYNSNVLYINMKYLSTWQGWSLVNPDYSKTLNWQKYKLTNDDGTLTSVSGLDLSSTTVLNSLKPGMYYGNNFINAPVPAGFLEVVSRADNTIKRIELKPYNTKDTYVMTYTNSTWSSWQLMNAQPTFSDTGWLPLVLSNGVQPYSTGYTPQYKLVNNNGDVTLKFKGAVKNITTSGVAIATLPSNIASQVTMNSAFVQNSSVKSGNATIARWSVTTSGDLRLDGVSFSNSLMTADDFYPINAVIPL
complement(1693783..1696446)       PHAGE_Staphy_6ec_NC_024355: pre-neck appendage; JMUB0001_1586; phage(gi658310355)     0.0                 StaphylococcuscapitisMKFNFPIELGEVFRRYTIENFRELKYYFDEAKQKLIDHQKTDKHAHNANQIDYVTDYSNTIDEAIKKLKAEHDNMVIGANGDGIAEVKNSRVTTDGVAKDLLSQRLDADFSKLSNKIEENYNLLNTKIERIVNVNDFGGDPTGQTDSTQAFVKAFGKGNVHVHMTAGTYVIKGLKLPNNTILSGEGKGITFLRIADDAPAETIGITNLYMDGTAENIGVEDFTIDGNKFRQNKSLQPAGGSRSSNIRFAGVKGGFMRRIKSYDSLLHSFDVTYASDDYYYAGDGVRVKEALESKYIHIDNCEATGFGDDGITTHHSRYLLLTNNYSHDPTPDSGNHNGMEIDDGSQHVFGANNKTENCFGGLEIKAHEPTSAASDVVFNNHLDIRSIRSYNIRHIGHHKATDAKSKTAYNVTLNNCVALYPQYNGAYEGATPRALVVCAYRNVNINNFTAIGDGNFMAGMPVIVVQYRAENVNLNNINIRGFSNAMADIKIFGGANRPKKVTISNVNIVESSKNIGIAGGGGVYDTKIIGGNLQGTGTGNAIEMYNNTAEIIGVNAENYNRAAVISGKEYFYVPSVHKGGFTGGATGSAAIAQRSAVMATTGNSFATSNRSWLLGVGANSTASGSRSGIMNSLESMTNPSNYVQTIVNSRGVKSLGNYHFQMGYNADGTPKESATTIDMVSTSGNIRTKGTVQSGQNFGDYAEYFESQSGQPIPTGTIVTLDGRYVRKAQTNDIPLGVVSGTAGVVLGDQMFHHKDKYLKDEFGVTLTQSEEHTWEDDEGNVYSEEVERPIPNPDFNENYDEEEYLSRSERPEWNIIGLIGQVFIRVDETVSANDYIKPNNGVGTKDNVNGFYRVMQVTTPYSQEKGYGVAVCYVHPISLFNKGSVG
1693902..1693915                   attL                                                                                 N/A                 CATTATCTTTTGTA
complement(1696458..1696901)       PHAGE_Staphy_StB20_NC_019915: tail protein; JMUB0001_1587; phage(gi431809785)        5.10e-11            StaphylococcuscapitisMTEINIRYLQDNDGDRYYPVTHVDAIAGTSVDDWTKFNLDKPATQNTAFKDETPQGFDCSYKTLELFDLKVKSIRINASNVKDGQLLTTLSDDFDLPLTPQSFYVRTPSTRQAGIVTLRPDGTLYFYNKDSNWTTTDYIYSQYTWIE
complement(1696894..1698465)       PHAGE_Staphy_StB20_NC_019915: endopeptidase; JMUB0001_1588; phage(gi431809782)       0.0                 StaphylococcuscapitisMDHVVLKNKEGTYAEILNDIDYSTFKYDYEKNNERSLTFTIYKTNLNEDIFNNVKNEMYVVYQTQTYVIKSTAIKYDGVMISNEVTAKHIFMEFQNHYIDKDVDDEQMNSDNEDSNNDEAKPTYTLQQYLDFGFKGNKLGFTFVIKGTFKERVAVDELGNKNGMEYLTEGAELFGYIYYADNKTIYIHDDASFYEMSDEPFIYHYNTDEVSATISTLDTKTVIKGYGKKKEKSDTKNYNPIKPKDLTYSGTFDKSGTWSTTTVGASYSKQFECKWGNETLVWTLKKMAKGGLVDVYLDDKKVGSYECYSKSAQSEQITISKNLAKGTHTFKVVFTGKKSGVDYKKSKPCMYVGTEKSTVLNLTAVLSGKDMYYAYQEYKSPNYDIFGEMVAPTVFDDTALDNDMLLKSLKAQLNDQPTVELATNYLGLEQIKDNNMIRFIHKPLGFNTDLKVVKLSAPHAYVNESVQVEFSNASKDIVQIQNQINRNIKNVNSLVKSGALSKGATISMPKNYSDIVGVVLSDD
complement(1698474..1699310)       PHAGE_Staphy_StB20_NC_019915: tail protein; JMUB0001_1589; phage(gi431809781)        3.23e-77            StaphylococcuscapitisMNENRWLKIITDEGTVNINDILPNFLFLEAKASFPTSNNDNITIKGVDGELPGSVSFAPFSLVVKCGYDGLDLIDAALAENKLRSIFNKRKPYYVITSDNPNIKYAVKNPDISPDYGDYMAVKFELTFSVYKGYSESLYATDNFSLSNGKWQFESGLVVDDSIKYNHTTSGFKIYNGSDDVINPIMRHHLNIYLNVDAPKGFKLTNTTTGDVFEYTKPITSKQTLILQGVHPILNGQRVGIDTNFNFLTLAPGYNEIEITGSNLGKTNSKWVFNYIYR
complement(1699325..1705501)       PHAGE_Staphy_vB_SauS_phi2_NC_028862: tail tape measure protein; JMUB0001_1590; phage(gi971750146)     0.0                 StaphylococcuscapitisMEEKLQGLTLEMKLDSLGVQEGMKGLKRQLGVVNSEMKANLSAFGKSEKSMAKYEAQIKGLSNRLEVQKQMFNQAESELKKLNSDYKTAQTRIKGVEKAYLNLAEANKKDKVALDKSNQALKENNSELKKAENQYKRTNQRRNEAWQKLKQLRQAEKDLKNNTEATTSQLKRANDAVQKQATKHKELVQRYKEEGAQVQKLRSQNKELSNSNDKVKSTYDKTNTELKQAENEYKQLNNTIKNHSANLAKAEKAVNSERTSLNNLERSLGKVKADMSAFNKEQLISNSHFTKTANQADNVSKKFGVMGQKMTSAGRSMTVGVTTPLTLGLGAAVKKSADFEEQMSKVGAVSQASGRQLKAMSDEAVMLGAKTSKSASEVAKGMNELAQLGFNANQVMKAMPGVISAAEASGADMATTAQVMASSINSFNLKAENSGHVADVLATAANDSAADINYMGDALKYAGTPAHSLGISLEDTSAAIEVMSNAGLEGSQAGTALRASFIRLSNPTKKSQKAMDELGVSLTNSKGKFVGMPKLIEQFRDGMKGMTKEQKLANVAQIVGTEAASGFLALIDAGPNKINKYSKSLQNSDGASAKAAKRMRDNLKGALEQLGGAFESLGIKIGSDLTPAIRGAAGFVQKFTEGFTALPGWVRKSAIALTILTATIGPMLVAGGLLAGAVSKAAQGYASLNRQMAINTVETKLNAKANTQTAGSLALSGKASKGASGWFGRLGGSLLTTIDRFGGLGRAISVGIKFLGKLTIPLTIATTIFGVAYEKMDWFRRGFSDMGKLVNQVGESIDFSWIPNMGKAWDDFKNDMAKGLQDGLLFKGIHKLFNGIHSAASKASDKVNVLGKGVSKETKSALGTYVKYSDQSDKIFEQIRYNHGQITKKQANELISINKKMSSELISQLEKRKAKELKLDHDVLDGSKALSEKRKQAILQKATEEGNIRIRKAKELNKRIEALEEKAAKNGKLSKSETKELQRLYEQRNNLAVKSLSKGEKEQQRIMSRMSANRRAMSIKEASETIQESIKARKQAIKDAKKKYDAKVDEINQMVGLSKKEKNKLLNEAQDQYNKDVKKANAHHRTTLNNVKKSNKNVEKEINLSNGKVMSGMQKWFHGLTVDSKKAWDKMGKNAQHFGKLMSGAGKWFKGLGSSASKAWGNVNATIAKHSKSSYNSAKNWLGKTTKNAVSNFKDARNSAGKHWGNISSTISSKTKTAYGHAKSWLGKTTSNAISNFKSAKNSAGKHWGSMSSTIASKSKHIFGSVKTWFGKTSGNARGNLSNMLGNARKYWNRISDTSSSNSKSVFRSTSKWFGNAFKSLKGNMGNMLSNARSRWNKISDTAWSNSKSVYKGTSKWFGNAYSSLKSWTGSMYDKAHDRFDRISSDAWSNAKSVYKGFKTWLSNTLSWIRSVGKDMGDAAADLGKSVANKAIAGLNGMIGGINKISKAITDKNLIKPIPTLSTGTYSGASVATDSNGGVSSPTLAVVNDRGSGNAAGGGVQEVIHRADGSLEAPQGRNTIVHLNKGDGVINARDTKKMQNMGMIPRFAGGSKKKNWLENITDSAKDVAQSMLKGASKGTSHAKDVAKDKTKNVIDKAKEIGTDALESAEDAAMGIWGGIKGVTKDVGEFLEHPGKLVDKVMDFMKVNFGQGANTTVTMAKLSYEKLKKSLVDKVKQWFEDYGGDGDGGYIKYLDNITTPYSPNGPPPGYAFHWAHPGIDLPYHYEKVQSTTSGIARTKDTGNVGFGHHIVVEGKPYDVIYGHLSKWLVKNGEHVHPGTVLGISGSTGSSTGPHLHYEMNKHGFGSMTGHSIDPVKWLKTHNGSKGGGSRAASAWRPEVIKALKMNGLPASSAYVNAWIRQIQSESGGNAGAHQGVIDINSGGNEAQGLVQVVPSTFRANKFPGHGNILNGLDNLLAGIRYAKRTYGGRMLSVIGHGHGYENGGLVTKHQIAEIGEGNKPEMVVPLTKRNRAVQLIEQAMRYVGMDSKSTNVTVNNDNSLIEKLLSQMVAMSDRNNRLTEAIVGLLKQPSKSTDPRTAEQLLSQLQGDRYSKTAFNMGL
complement(1705516..1705674)       PHAGE_Staphy_StauST398_2_NC_021323: hypothetical protein; JMUB0001_1591; phage(gi509139926)     2.01e-14            StaphylococcuscapitisMEQYGWTLTEVKEQPYFQLLEVLQDEGNKEEEKSEAEQKVYTGTDLKYLFGG
complement(1705725..1706066)       PHAGE_Staphy_vB_SauS_phi2_NC_028862: hypothetical protein; JMUB0001_1592; phage(gi971750144)     2.22e-37            StaphylococcuscapitisMIKFEIKDAKTGKTESYKKDFVTMGEAEKFWDFMAKVEKENEKSNPDTKKVRGMERQLVVDFFADQGLTEESILENMSTKTYSKVVNDLFREVQGEDESDSEDASEEVGKTEE
complement(1706108..1706335)       PHAGE_Staphy_Stau2_NC_030933: hypothetical protein; JMUB0001_1593; phage(gi100095)     7.21e-15            StaphylococcuscapitisMSTKLQVFDKEGNVVGEAELNKDGTTKVSIHDLEPDTTYPKGTFKVAHVENNAQSELIDVPEFKTKPSKSKSKAQ
complement(1706347..1707003)       PHAGE_Staphy_Slt_NC_002661: major tail protein; JMUB0001_1594; phage(gi12719438)     7.03e-109           StaphylococcuscapitisMGSYVAGFKRLHVGVFNDKADKVISKHIWEDENGGTVNMNVTGLAPDMVDMFASNKRVWMKKQGTNEVKSDIELFNIPSEELNAVLGRSKDKNGTAWVGEETRAPYVTVIGESADGMTGEPVYCALMKGTFSLDSMEFKTKGEKEEQPETTKLTGDWMNRNIEVDGDTKGIVYGYHEGKQGADEFMKKVFVGFDGSVSAPSNVSATGNTNSATVTSEQ
complement(1707045..1707440)       PHAGE_Staphy_StauST398_2_NC_021323: hypothetical protein; JMUB0001_1595; phage(gi509139921)     2.71e-59            StaphylococcuscapitisMNILNILRELIVSDAQLKEIIGSRVYYYEVPETSDTSKPFVVLTPINDDPSSFVSDKYLSESYFVQVDVETYKHQTTIDVTKRIRYLLFQMNMYQTSSQLDDYFKETKRYVMSRRYRGIPKNQFYKGERIF
complement(1707442..1707843)       PHAGE_Staphy_phi7401PVL_NC_020199: hypothetical protein; JMUB0001_1596; phage(gi448244669)     2.48e-69            StaphylococcuscapitisMSVEIKGVSEVLKQIERRYGREAMREKSDKALNEASDYFLNTLKKEFESFKDTRASIDEMTKTKPYSKGSIYDRAILIEWVGPMNRKNIIHLNEHGYTRNGKKYTPRGFAVIAKALQASQYRYREIIKRELTR
complement(1707840..1708202)       PHAGE_Staphy_Slt_NC_002661: hypothetical protein; JMUB0001_1597; phage(gi12719435)     5.96e-29            StaphylococcuscapitisMATTIYKRKKLQSGDFRTPVQFFTYVNDGPYPDEVEKDELFKCFAETYAPSMRDSEVLDVANNEVGLTIVIRDPLQTYIPRATHKVKVEDYRLEQDIYNIKDIRLDTPEIGFITMVLGTT
complement(1708183..1708482)       PHAGE_Bacill_vB_BhaS_171_NC_030904: hypothetical protein; JMUB0001_1598; phage(gi100011)     1.06e-18            StaphylococcuscapitisMISDEILEQFKSRMHIFHSAEDERLKNDLDMSYSVLKRDYGEFDINTNEEGKELVFERTRYVYNEQLQYFLKNFSTELNNFGIQNIVMKEDYNDGDDDL
complement(1708741..1709679)       PHAGE_Staphy_P954_NC_013195: major capsid protein a; JMUB0001_1599; phage(gi257136406)     8.36e-167           StaphylococcuscapitisMTINLSEDFKSARQELINSIKNGESEETQAKLYEGMLNELFEESKKQAAQEAEKVASLTTNDKQLNAADRKFYNEINKNVGYKEETLIPEETIDRIFENLTTEHPLLSEIGLKNAGLRLKFLKSETSGTAVWGQIFGEIKGQLDAAFSDETAIQNKLTAFVVLPKDLEDFGPAWIERFVRLQIEEAFAVALEAAFLAGTGKEQPIGLNRQVQDGVSVTGGVYPVKEAFSTLTFKDPDTTVAELTQVFKYHSTDEKGKSVAVKGNVNLVVNPSDAFDIQAQYTHLNAQGVYVTALPFNLNVIESVAQPSINIC
complement(1709708..1710457)       PHAGE_Lister_LP_101_NC_024387: Clp protease-like protein; JMUB0001_1600; phage(gi658607814)     4.07e-72            StaphylococcuscapitisMTKINVKGAIIPNNDKWVYDFLGMDATSPNDVIDALPSDNEDLEVIINSGGGDVYSGSEIYTTLKAYPGKVNVKVVGVAASAASVIAMAGDHVEMSPTAQMMIHNAWTVAIGDSNGMSKASEMLSGTNRGIANAYIAKTGLSEETILNLMNEETWLNAQDAVEKGFADAKMFEENTPQLVANSGQMISEDAKNRISSLKATAPQVNFDADEIAEKLYNLMNKEIDESKKLEKHEEKTPSAKNGFGRFVF
complement(1710444..1711604)       PHAGE_Staphy_SA345ruMSSAST8_NC_048713: hypothetical protein; JMUB0001_1601; phage(gi100040)     1.11e-150           StaphylococcuscapitisMGLLDNILRRNKELTWMYDLDMFEDDTKNAYLKRTTLQTCIEFIARTLSQTNFKVTQDHKAIKDDTFYKLNVRPNTDMSAADFWQRVIYKLIYNNEVLIVVNDTKDLLIADSFERVEYALYPDIFKGVTIGEYEFERSFLMDDVIYLTYNNNQLNTFIEDMFGDYGEIFGRMIKAQMRNYQIRGVLKMDTSKIGKKDEQEKVQEYVNKLLKVFEENSVAVAPLTNMFDYTESSNANKGNSAPFSDITNLKKAMIDEVAKILGIPPSLIHGDMADLENAMESYIKFCIKPLLKKIEDELNAKLIPKNKLLKGKRIKAISIDKKDPLEMAEAIDKLVSSSTFTPNQVLILLGEDPSDDPNMDKYFVTKNYTTSNSENALKGGETNDED
complement(1711620..1713260)       PHAGE_Lister_LP_HM00113468_NC_049900: hypothetical protein; JMUB0001_1602; phage(gi100003)     0.0                 StaphylococcuscapitisMIRNKHVDDYINLWKTGKVLLNKERILLIAYLEKHILSRDDLYFDEEQIENFIKFTEKWYFPLQSFQKFIVPFVFLFEKEGNFLFYEQFFITLGRGGGKNGLITALSNYFISYLHGVPNYDISVVANSEDQAKTSFEEAYNMIERNELEDMFYLTKLVITDTETKSRFRFRTSNAGTKDGGREGCVIYDEVHRYEDSETVDVFSSGLGKVKWPREFFIGTDGYVREGFLDKLKERSMSILNGETPDDRLFPFICKLDDPLEVDNPEMWEKANPMFSKPMSDYAQGLFRKVKNQYNEMSFSPTKRQEFMTKRMNLPEVDLEKVVAPWEEIIATNRPFPILERKQCIGGLDYASIKDFAAVGLLFRDGDDYIWKSHSFVRKGFLDSVKLKAPIHDWEEQGLLTIVDEPSIDPLHIVLWFDRMRETYGLEKVIADNFRMDLLRPLFEDYGIEIEVIKNPRAIQSLLAPRIETMFANHHIVFDDNPLMRWYTNNVAVKIKPDGNKEYIKKDEVRRKTDGFQALVHALYRADELLEVDMNDSLDFLNAINF
complement(1713257..1713559)       PHAGE_Staphy_vB_SpsS_QT1_NC_048192: methyltransferase type 11; JMUB0001_1603; phage(gi100001)     7.52e-26            StaphylococcuscapitisMKNKAKIKNYLLEKIEKDNPVQVEKVERYLNLLTIFYDLDKDIKAKGLMVETVNASQTFLKPNPAIAEKNKVNTSLISIEKSLGLNKQNEDEPSPRRGLV
complement(1713708..1714043)       PHAGE_Lister_B025_NC_009812: gp65; JMUB0001_1604; phage(gi157325282)                 6.15e-28            StaphylococcuscapitisMALTKEQRRTFYNSMAWRDKRSEVMQRDHFECQRCKRLGKVTIDELEIKKNNRKKIKLVVHHIKELADHPEYALDSDNLETLCVECHNEIHDRNFKTKYKNKIPKWNDEKW
complement(1714178..1714612)       PHAGE_Staphy_42E_NC_007052: ORF030; JMUB0001_1605; phage(gi66395538)                 7.99e-89            StaphylococcuscapitisMSTAYDIKPGTFKYIESEIYNLHENKKEINRLRLEILNPTKEVDTNIVYGPLQKGEPVRTTELMATRLLTNKMLRNLEEMVEAVEYVYEQLPEEHKKVIRLKYWNKDHKLKMDQIGEACHMHRNTVTTIRKNYVKAVAMHAGIK
complement(1714625..1714771)       hypothetical protein; JMUB0001_1606                                                  N/A                 StaphylococcuscapitisMWMITSILLAIVLLISMGVQHEQRKMIKERDYYINALRYYNNHNSKSK
complement(1714789..1715388)       PHAGE_Staphy_P282_NC_048634: hypothetical protein; JMUB0001_1607; phage(gi100065)     1.32e-42            StaphylococcuscapitisMNHELLGGIYTLAGGFALYTVKEIIRFIVDANLNRKQANLINIYPIYSDVYKAAKMFIGSYATPILQPETLKYEDVQVLKKYELEKEIINGYKEYIDFRYLINLSYHLEKMRGLKKEFNNLFSVNQFCFDEQFIKKTISIDSVMSDDLNMLDQEIQSHLEKGSTDVEDKIINQSYKDKLVVYERYLDDFNKEFKKKFKI
complement(1715545..1715715)       PHAGE_Staphy_Ipla5_NC_018281: RinB; JMUB0001_1608; phage(gi399528958)                4.75e-21            StaphylococcuscapitisMIKRILKIWFTISVYELGKWLGRELYYKLSANDEVDKAPLDFKNYDHIHLNAEVSE
complement(1715752..1716177)       PHAGE_Staphy_StB20_NC_019915: dUTPase; JMUB0001_1609; phage(gi431809758)             1.75e-92            StaphylococcuscapitisMTNQLEIKLLSENATMPTRANECDSGLDLYVSETITIPAHTTTIVKTDIAINLPYGYEAQVRPRSGKSLKTKLRVALGTIDKTYHKEIGIITDNIGDEDITVEKGERLAQLVVVPVVYPTPKEVKEFENESDRGAYGSTGE
complement(1716177..1716386)       hypothetical protein; JMUB0001_1610                                                  N/A                 StaphylococcuscapitisMRKQVNTMRSVIVMERKVVKPKEYIAKPKGNFIIRNSAEIIIYSAIFGFVINLLNNALLFKILIQLEEE
complement(1716485..1716661)       PHAGE_Staphy_6ec_NC_024355: hypothetical protein; JMUB0001_1611; phage(gi658310431)     1.49e-20            StaphylococcuscapitisMWKVKEFEQEATKTDDLVNRFVKENNIKEYQVCGYQSIWVEGYEQHCSHILIKYWEDE
complement(1716648..1716926)       hypothetical protein; JMUB0001_1612                                                  N/A                 StaphylococcuscapitisMDELVKMTFSDGNGNVLREGYVAVTNEFLEQINVENHSITSPEYVKELKRKARAFDEIVEIYNDVDNFSDSDLIDVIEDKMNDLESDSDVES
complement(1717005..1717382)       PHAGE_Staphy_187_NC_007047: ORF048; JMUB0001_1613; phage(gi66395259)                 7.42e-14            StaphylococcuscapitisMMPKLRAYVKNGDKWLQIDSDKWGFLLKISPLLDSDVKVSDGMIVLETSKKHLVYSSGLTDFDGVEIFDKDIVKNIDSEELGVVEFDEGQFKVNFRGVSEQLWEIDKDIQIIGNTYRHPHLLERD
complement(1717379..1717816)       PHAGE_Staphy_80_NC_030652: hypothetical protein; JMUB0001_1614; phage(gi100021)      2.44e-78            StaphylococcuscapitisMSVHFSSKSNEWYTPQYLFDELNEKYQFTLDPCASHENAKCDKYFTIEDDGLTKDWSKDIVFMNPPYGRNIKHWIKKAYEESVKGATVVCLIPARTDTTYWHDYIFNNAYNIKFLKGRIKFGGAVNSAPFPSAIVVFKPKGDGLK
complement(1717813..1718220)       PHAGE_Staphy_SMSAP5_NC_019513: hypothetical protein; JMUB0001_1615; phage(gi422935820)     3.07e-13            StaphylococcuscapitisMPKIKVEKQMNLEELIKYAKETSLKRRVFKCRHKNGEVVFDTEGKFCSHGWISEDDTFTVEDEIEVTENTILPYLVQVVEEETIKPRKHIYQHRYASINEIIQKETPVLTKILSFHILKVDGTMILLWRNGEMVE
complement(1718234..1718392)       hypothetical protein; JMUB0001_1616                                                  N/A                 StaphylococcuscapitisMVKIKEIQTDGTYTIYDSNDNTINITKEEFEEIKQYSIDSEYNFLSSEDTQA
complement(1718395..1718583)       hypothetical protein; JMUB0001_1617                                                  N/A                 StaphylococcuscapitisMGVKAKYEYVVYKGDEILSAGTANEIIEKMGITETHKRAYEADKSNRRTIVAIKVPIAELED
complement(1718573..1718803)       PHAGE_Staphy_IME_SA4_NC_029025: hypothetical protein; JMUB0001_1618; phage(gi971766735)     6.89e-31            StaphylococcuscapitisMTDMINQPPHYTYGDIEIIDVIEMITKEYPSELAFVIGNATKYISRSPYKNGVEDLKKARWYIDRAIEKWSEDDGR
complement(1718807..1719004)       PHAGE_Staphy_StB20_NC_019915: hypothetical protein; JMUB0001_1619; phage(gi431809753)     9.92e-34            StaphylococcuscapitisMENTLFQDLKVGDSIWFKSPYTSYSHWGTVESLNFNFEGKSYVNVKVGVETVLRAYENYTFIRED
complement(1719005..1719310)       PHAGE_Staphy_StB20_NC_019915: hypothetical protein; JMUB0001_1620; phage(gi431809752)     7.53e-50            StaphylococcuscapitisMEENFIDIYVVRQRIKKGWDYNEAIEAPAGMRRKEWDKLKRMERLNEMEEAESLKERIQRRRMEELRRKKPHLFTVPQKHGRGKWCSHLMENDIFPKKVAR
complement(1719372..1719566)       PHAGE_Staphy_StB20_NC_019915: hypothetical protein; JMUB0001_1621; phage(gi431809751)     9.00e-34            StaphylococcuscapitisMTEPREETVTVNATVKIKCKFPVWLNKHTTVEDEKEKLLDVIAENPEKELMNENFEFIDLVEVE
complement(1719559..1719966)       PHAGE_Staphy_StB20_NC_019915: hypothetical protein; JMUB0001_1622; phage(gi431809750)     5.75e-75            StaphylococcuscapitisMSKYNAKKTEYNGIVFDSAVECDYYKHLENKMNGVYYNRIELQPRYELIPKFGKQRKTEYIADFALYLDGELVEVIDVKGMATDTAKLKAKLFRYKYPDVKLTWICKAPKYTGLEWIEYDELIKVRRKRKREKND
complement(1719975..1720220)       PHAGE_Staphy_StB20_NC_019915: hypothetical protein; JMUB0001_1623; phage(gi431809749)     2.16e-49            StaphylococcuscapitisMGLREGYKDKYYLYTIDGWKMCSVIPLAEDMFNIGNYAGMHFQKVFNGNVTKEELNKLKRKYKLYRKEELQQQTTIDDYLF
complement(1720223..1720378)       PHAGE_Staphy_69_NC_007048: ORF101; JMUB0001_1624; phage(gi66395362)                  1.76e-11            StaphylococcuscapitisMVTKENIIEILKCSDLYAQKMIDWAKDDEELNNLINSKLEEKAYRQPIVEV
complement(1720372..1721142)       PHAGE_Staphy_P630_NC_048635: recombination protein; JMUB0001_1625; phage(gi100049)     7.35e-132           StaphylococcuscapitisMQSMESLARNIKPSQNIVEEQRNLKCNKCGNTYDYYKFSNGHEFRHGCDCTMIQAGKEAEKKRKQKYINNIFNQSTVNHSLQGATVNSYKPQNEQQTHAKNTAIEYVKTFSVDKPKSLILQGSYGTGKSHLAYAIAKAIKNEGYSVAFMHIPMLMERIKATYNKNATETTDELVKLLSNIDLLVLDDVGVENTEHTLNKLFSIVDNRVGKNNIFTTNFSDKHLNQDMNWQRINSRMKHNARTVKVLGDDFRERDAW
complement(1721153..1721932)       PHAGE_Geobac_E2_NC_009552: putative replication protein; JMUB0001_1626; phage(gi148747766)     1.14e-52            StaphylococcuscapitisMGKHRFVNVEFWQDAFVLDLTPEEKYFYLYIMTNSKTSQCGIYELPYRVIELETGYNRETVEKLLNRFVEYGKIKYSKNTKELFILNWAKFNWNNSEKVVNRIKQELDNVKEISFIEQYLDYVNSLEKNTSHIDYPYSIDSLWNKEKEKGKKKERKEEYIPFENIVDYLNLKTGKHYKHSTGKTKRCIEARWNEGFTENEFRKVIDNMTSQWLNDEKMNQYLRPETLFGTKFEGYLNQELQPSGMDQLERMKYDPSYWD
complement(1721919..1722680)       PHAGE_Pseudo_JBD44_NC_030929: methyltransferase type 11; JMUB0001_1627; phage(gi100001)     2.50e-52            StaphylococcuscapitisMSKRKNVSNKTRFEVFKRDNFTCQYCGKSAPEVVLNVDHIEPVSKGGSNDISNLITSCFECNNGKGNKKLSDKSELEKQHNELILLNERKKQLEQMMEWKKELINLDNHKVDMLTEYIEETLSTRITEVGKKKLKRWLMKYDFKDLVYATDKAFAAYEESDSNIVFDKIERIAYYEKHPVAEYIKKSSYIRGIFKNRNIFYRDFELKEIMRMWSENFDSFDIPIDVAKQAKTYKVFEEELLYQIDEVIRNGEA
complement(1722673..1722879)       PHAGE_Staphy_EW_NC_007056: ORF084; JMUB0001_1628; phage(gi66395867)                  7.24e-28            StaphylococcuscapitisMTSGQRIKEHRLNLGETMEEFGRRFNAHKSIVSKWEKDLTKPNVKRLRIIADDMNITVSELLGSEKDE
complement(1722885..1723115)       PHAGE_Bacill_BalMu_1_NC_030945: methyltransferase type 11; JMUB0001_1629; phage(gi100001)     8.53e-09            StaphylococcuscapitisMKSRMITIDDRIQIAFRISQLRNNNNLTQKGFGKRVGVSELSVNRWENRWQLPPMKTVRRMAEEFKTTPEWILYGE
complement(1723112..1723780)       PHAGE_Staphy_phiETA2_NC_008798: hypothetical protein; JMUB0001_1630; phage(gi122891733)     4.76e-131           StaphylococcuscapitisMQRITRYQRDNDGTYSVVATGVELEQSHIDLLENGYSLIAEVEVPDNKKLSIEQRKKIFALCRDIELHWGEPVDSLRKRFQAELEIMNGYNEISLSNCSMRIASELIELIIAFMFHHQIPMRVETSKLLSGDKAMLYWATVNRNCVLCGKSNADLAHHYAIGRGANRKSMDHYGYEVLALCREHHSQQHNIGVETFDKLYHLENSWIKVDDKLNNMLKGVKE
complement(1723781..1724329)       PHAGE_Staphy_StB20_NC_019915: HNH endonuclease; JMUB0001_1631; phage(gi431809743)     4.35e-64            StaphylococcuscapitisMKEIWKDVVGYEGIYEVSNKGRIRTHKYKTTYTEKHGVRHWKQRYLKDKTPNGRDVRVTLWKSGKCKDFLVHRLVAFAFIPAVVGKECINHIDGNPKNNNVKNLEWCTYKENTNHAFENGLNTSNMAVKLTNHLGIEYEFISMSRASKFLGRNHGYVSGRLKDNCSKLTDTDGNKYKVEKLI
complement(1724342..1724896)       PHAGE_Staphy_3MRA_NC_028917: single-stranded DNA-binding protein; JMUB0001_1632; phage(gi971755506)     2.49e-120           StaphylococcuscapitisMKITGQAQYTKETNQEAFMKGGDFLGAGEFTVKVKDVEFNDKEGRYFTIVFENNEGKQYKHNQFVPPFQQDFQERQYIELLSRLGIQLNLPDLTFDTDRLINKMGTIVLKNKFNEEQGRYFVRLSFVKTWNKGDEIVNKPEPKTDEMKQREQQASGQQTPMSQQSNPFGNANGPIDISSEDLPF
complement(1724923..1725699)       PHAGE_Staphy_phiETA_NC_003288: hypothetical protein; JMUB0001_1633; phage(gi17426245)     2.02e-168           StaphylococcuscapitisMTEEKQEQDILTQLGVKDISKQNTNKFYKFAIYGKFGTGKTTFLTKDNNALVLDINEDGTTVTEDGAVVQIKNYKHFAYVIKMLPQIIEKLRDNGKKIDVIVIETIQKLRDITIDDIMNGKTKKPTFNDWGECATRIVHMYRYVSKLQEQYQFHLAISGHEGINKDKDDEGSTINPTITIEAQDQIRKAVVSQSDVLARMTIEEHEENGQKSYEYVLNAEPSNLFETKIRHASNITINNKKFANPSITDVVEAIRNGN
complement(1725700..1726185)       PHAGE_Staphy_StB12_NC_020490: hypothetical protein; JMUB0001_1634; phage(gi939535491)     4.40e-94            StaphylococcuscapitisMSSLFILKDNYKQIYELIAEQEDEQILKDTLDSINDALEDKADGYVAVIKSLETDNIAIDEEIKRLKQRKTSNENGIKRLKETLQQVMEETGKEKFKTALNSYSIANNPPSLDVTDESLIPKQYYVEQKPKLDKKELLKAIKGGLELKGVELKQSRSLRVR
complement(1726151..1726432)       PHAGE_Staphy_StB20_NC_019915: hypothetical protein; JMUB0001_1635; phage(gi431809739)     6.55e-29            StaphylococcuscapitisMQEFITIRLPKEKYSQLIAKSVQLDFLRSDYDFLNRQYEDMCDRYAELRKDYTEQIQSCIRLDKTIKTMEESISILREGVLNNEQFIHLKRQL
complement(1726494..1726667)       PHAGE_Staphy_StB20_NC_019915: hypothetical protein; JMUB0001_1636; phage(gi431809738)     1.38e-21            StaphylococcuscapitisMKYLLSYMTMILAMIVTLLVGGGFTSIIGVAILVFIASTFFWNEWLKIKKTERRTNV
complement(1726681..1726890)       PHAGE_Staphy_Ipla5_NC_018281: hypothetical protein; JMUB0001_1637; phage(gi399528932)     8.58e-37            StaphylococcuscapitisMEYIGFADANEFVKVSGISKNDLEKHVYSNREFQQSCMYRFGKNHKRYIEIKTGIEFIKQNILISETAL
1726979..1727455                   hypothetical protein; JMUB0001_1638                                                  N/A                 StaphylococcuscapitisMDIKELKNIDVLLKMINSDLQTKHSYKIVCRYKESLVTIDFVLPFQWNDEFYCYEPKTINSRQDDKERVYIELNSQYQATKDISKFKFKQLLDHYKNQQTNHLMLYLLENYDFYNFDMNFSDYAYNIQSLDGKWKLPIIKLDNNLEFISLHLIEHEQN
complement(1727418..1727651)       hypothetical protein; JMUB0001_1639                                                  N/A                 StaphylococcuscapitisMEEKKMSRSQVFNVYKLKEQAFEEFYPQEHQELANEILQSIKKKEPTYEEAYAVLNLVHAKLEFESNFVHVLSNVKI
complement(1727690..1728481)       PHAGE_Staphy_AJ_2017_NC_048644: tail length tape-measure protein; JMUB0001_1640; phage(gi100057)     5.94e-39            StaphylococcuscapitisMNEIQQLFNLKRNEDGTVAVSGRELHKGLEIGTQYDKWMERMIAYGFEENIDYIIQSVKVQSQKRLRTYEQLDHIMTLDMAKEISMIQRSEIGRKIRGYFIKVERQHNELASAYGITSLDDMNQLIEQLVSDKLDYLISTGQVSNQKLEELNNKFEGEYVTPQDIDAIKFAIKSKAEQILGKAGIQVTLDEFLIGDVYEQALANKKAKEEYRHQLGKVKSKLLVKSKKHLGMKGNAPNNHIKRKDVDLAIQFIKDVRPSAIEI
complement(1728481..1728675)       PHAGE_Staphy_phiETA2_NC_008798: Cro protein; JMUB0001_1641; phage(gi122891721)       6.86e-34            StaphylococcuscapitisMATTEFGMKVRMELLKRNITNKQLADMLGISSAYLSDILRGRRDAFEQKKRIAKILEIKEEVKS
1728939..1729277                   PHAGE_Staphy_phiETA2_NC_008798: repressor; JMUB0001_1642; phage(gi122891720)         2.07e-58            StaphylococcuscapitisMNLVQRIRNLCNSQSLTFAELERILGFSNGQIRRWEKTKPGIDKIQKVADYFDVSVDYLLGREKDEYAGEQEDEEIRIMHRGVKNMTKEDREKALKMFETFFDNWDEYTKDK
1729291..1729962                   PHAGE_Staphy_phiETA2_NC_008798: ribosomal protein; JMUB0001_1643; phage(gi122891719)     4.09e-56            StaphylococcuscapitisMHFVYQNSFLKAARAVSALIETNYIDRFPLPIKEIIENDSNVELFTFEDFCNMTGYTLNELQTYGGSDEAFHIKKGNKFAIIYNDDVYHRRLRFTLAHEYGHYIMEHDGMSYKNTPIFQDAQRTNIEEYEANSFASCLLFPLNVRYKYRNVLNEYDVADLFEISYQAAKVALDIFDEHMDSGLEDHISMFEHRHMETYMSFLEEMLGEQLAEYNHIMRTEYGY
1729989..1730564                   PHAGE_Staphy_2638A_NC_007051: ORF015; JMUB0001_1644; phage(gi66395465)               1.24e-11            StaphylococcuscapitisMKFKLLGTAILSSALLLTACGQDGDKSNKDDNKKSESKSAKKSNDPKKNKDKKSEDNKKKDSNKDKGQPSEDTQQNEQSNEQQTQQNNTQNNSNQINQQQNNQQAQQSNSKEPTKEEIAEWDRQNVKGGTDYGLIDPKEANESSQSQNEEPDEWVKGQEEWANANQSQKEEIRKQDAEKYGYEYDPKNYEE
1730813..1731880                   PHAGE_Lactob_iA2_NC_028830: Abi family protein; JMUB0001_1645; phage(gi971747652)     1.12e-26            StaphylococcuscapitisMRDIESIKTLLETSIYNKPHLSCEEQLVLLEHRGVKIENKKFALEQLETISYYSLINAYSPLFKQENGQYEGNVTFNDFYMCYKYDTRLKNIIFKYIILIEQTLKTNLSATVAKNYGVQEPTIKRTFTNKKGKQITGYDIRNSYLDAKNYDRNNSYRSGHLRHLSKYRDYLKNDSIKHYRNKHNHIPPWILIIPLNFGETIKWFSILKPKDKQSVASKVCGLKTDNSLKDVAMPILEILRQYRNVIAHGQRFYSFKSNEDTAHLSLSFVNSLLEYDFIDKTKYKKGIGKNDLYSLIISIMIFTKPSGIRKKFIEELNVLYKEIEKYCKYNLFEVIGVTQYDLEKLYTLNRLLKAL
1731606..1731619                   attR                                                                                 N/A                 CATTATCTTTTGTA
1731944..1732990                   PHAGE_Staphy_Ipla5_NC_018281: integrase; JMUB0001_1646; phage(gi399528924)           3.19e-157           StaphylococcuscapitisMATFTVNKRKNKTSSSWQYDVKHPSLKSGKKRKSGFKTKAEATNAAQQLIRDLEDGKKVNNNKKFKTYYLEWLVANGKDKLSIKQQYWYEHSLDLFLDHFGEDIMIKHITRNEYQKFLTNFANGRTSETVRKVNLFLSNCLKDAVYDGYLTKDPTYNVKAKGTKSAKKEDVKFLTIEQYEGLREYFKLKSDKSSIMLFILLITGGRFSEVNRMTYDDLIYQDNAIHLPGTKTVTSDRIVEVSKSDLLYIKSALLHHPRRRDNIIFNLSHNAISKVFRKAKGKFEIDNEVTPYSLRHTHASYLLSKGIPIEYISKRLGHSNIGITLDVYTHLLDEHKKEQGARVRELFS

#### region 2 ####
complement(2006147..2006500)       PHAGE_Paenib_Tadhana_NC_048691: holin; JMUB0001_1906; phage(gi100034)                1.69e-05            StaphylococcuscapitisMRKKEDKYDFRAFGLAIKEARLKRGLTREQVGALIEIDPRYLTNIENKGQHPSIQVLYDLVSLLHVSVDEFFLPANNLVKSTRRLQIEKYMDSFTDKELSLMESLASGINEARNIED
2007005..2007427                   sigma-70, region 4; JMUB0001_1907                                                    N/A                 StaphylococcuscapitisMKPSSFQTTIENQFDYICKRAMEDERKNYMLYLSRIAKREVSFSDVGDYLVSQFATTDNYSTDFQIFTLNGLSVGVENDLLSEALRELPDKKREILLLFYFMDMSDSEIADLLKLNRSTVYRHRTSGLALIKKFMEEFEE
2007424..2007654                   conjugative transposon protein; JMUB0001_1908                                        N/A                 StaphylococcuscapitisMKTQYPMIPFPLIVKATDGDTEAINQILHHYRGYITKRSLRLMKDEYGNQSMVVDEVLRGRMETRLITKILSFEIK
2008115..2008318                   DNA binding domain-containing protein; JMUB0001_1909                                 N/A                 StaphylococcuscapitisMKQTDIPIWERYTLTIEEASKYFRIGENKLRRLAEENKNANWLIMNGNRIQIKRKQFEKIIDTLDAI
2008279..2008290                   attL                                                                                 N/A                 ACAATTTGAAAA
2008400..2009617                   PHAGE_Thermu_OH2_NC_021784: integrase; JMUB0001_1910; phage(gi526118367)             1.72e-17            StaphylococcuscapitisMSEKRRDNKGRILKTGESQRKDGRYLYKYIDSFGEPQFVYSWKLVATDRVPAGKRDCISLREKIAELQKDIHDGIDVVGKKMTLCQLYAKQNAQRPKVRKNTETGRKYLMDILKKDKLGVRSIDSIKPSDAKEWAIRMSENGYAYQTINNYKRSLKASFYIAIQDDCVRKNPFDFQLKAVLDDDTVPKTVLTEEQEEKLLAFAKADKTYSKNYDEILILLKTGLRISEFGGLTLPDLDFENRLVNIDHQLLRDTEIGYYIETPKTKSGERQVPMVEEAYQAFKRVLANRKNDKRVEIDGYSDFLFLNRKNYPKVASDYNGMMKGLVKKYNKYNEDKLPHITPHSLRHTFCTNYANAGMNPKALQYIMGHANIAMTLNYYAHATFDSAMAEMKRLNKEKQQERLVA
2009947..2010693                   PHAGE_Staphy_phiIPLA_C1C_NC_028962: replication protein; JMUB0001_1911; phage(gi971761142)     1.48e-53            StaphylococcuscapitisMSNKGSLYSILYYLAIALIVITIIVVVLIFYNTRKSASKPSSDRYSDFEELKKNTTKNKDWRIVTKHRKDNNILLTAIHGGGIEPGTTELARRVSNVGKYNFYSFEGLRKHNNDQLHVTSTNYDEPKLINMLEKSNETISIHGSSGDDPIVYIGGKDTKMAKAIAKALRKKDFTVKESPKEINAQSDDNFVNKNDTDSGVQLELTTAQREEFFKHHKLDKTTRGNPKKYTRDFYKFANAVEKGIKKAK
2010814..2011098                   PHAGE_Staphy_phi7401PVL_NC_020199: hypothetical protein; JMUB0001_1912; phage(gi448244650)     2.90e-06            StaphylococcuscapitisMDELTKEQKYTVAKFYKLYMERSNEGLSEEQSNDFKDSITTQDDYFCDREYEDFIHNCKVLIEDGYLEGDIEDQTIYNIKLTTKAFTEIEKSFG
2011122..2011346                   hypothetical protein; JMUB0001_1913                                                  N/A                 StaphylococcuscapitisMDNWKIDNHSNRKFLIQKNEGELSIVEPLDNGAFKILAEINLSNENDVNIYDSHLYVSVSLEQEEICIFDNNNT
complement(2011656..2012390)       PHAGE_Bacill_vB_BhaS_171_NC_030904: hypothetical protein; JMUB0001_1914; phage(gi100020)     3.51e-07            StaphylococcuscapitisMHKAKMILNEVPTMLKSLKNIFNIINGNKDYYNPKIDMKKEDDNLNGKKIIFLGSSITYGAASKGISFVEYLTTEYEVKGIKEAKSGTTLAGKNVNSYLNRLRKLNFVNTKIDAVVIQLSTNDARFGYEIGEMSQSFDLESFDTETTLGAIEYIIKYVHTKWHCPIIFYTCIRENDLTYKQLVNHLYPLKTKWDIHIIDIFNNDEINKLAESDKEMMADDSHPTKKGYRYLYTPILVKQLDEIL
complement(2012513..2012713)       PHAGE_Lactoc_bIL312_NC_002671: Csp; JMUB0001_1915; phage(gi13095918)                 4.76e-26            StaphylococcuscapitisMNNGTVKWFNSEKGFGFIERENGGDVFVHFSAIVEDGYKSLEEGQNVEFDIVEGERGEQAANVVKM
2013720..2014292                   putative lipoprotein; JMUB0001_1916                                                  N/A                 StaphylococcuscapitisMKKFFAVLLSSFLVLSACSHSDHSDKKDSDKNSSKTESKKSDKKDSKGDKKVNNAKDNIKDSKLGKKSKDKSSKSKDSKPKNKQTNQQSSNSASQANNTSTQPQNNNANNANNTNGNNQNSYNNQANSQNQQQNQQQNQTNNTQQNNSQRQQPSQNNQQQYSTGNNQSANNSQSMNNSQGQTNTNTQRGF
complement(2014414..2014845)       acetyltransferase; JMUB0001_1917                                                     N/A                 StaphylococcuscapitisMSLTRRKIEKKDYHKVLDIWEKSVISTHDFLKEKDRLELKPEIPNYLNNVEAYFWCDDDEIIGFSGTNDQNLEMLFIDPKYFRKGYGTQILQTLIREDQVRYVEVNKENYNAVKFYQKNGFEKYKESLKDQQGRDYPIYYLKL
complement(2014941..2015299)       tRNA                                                                                 N/A                 GGGGGCGTTTTTGGATTCGACAGGGGTCCCTCGAGCACACTAAGCGTGTCGGAGGGTTGTCTCCGACATCAACACATTTCAGTAAATATAACTGACAAATCAAACAATAATTTCGCAGTAGCTGCGTAATAGCACACTGCATCGCCTAACAGCATCTCCTACGTGCTGTTAACGCGATTCAACCCTAGTAGGATATGCTAAACACTGCCGTTTGAAGTCTGTTTAGAAGAATACTAATCAAACTAGCATAATACTGGTTGTCTGTTGCTTACTATTATGCGAAATGAATCAATAGACTACACACGTAGAAAGGTGTGTATCAGGACCTCTGGACGCGGGTTCGAATCCCGCCGTCTCCA
complement(2015419..2015889)       PHAGE_Staphy_StauST398_5_NC_023500: SsrA-binding protein; JMUB0001_1918; phage(gi588498309)     2.15e-96            StaphylococcuscapitisMAKKKTKSPGTLAENRKARHDYNIEDTVEAGIALQGTEIKSIRRGSANLKDSYAQVKRGEMYLNNMHIAPYEEGNRFNHDPLRSRKLLLHKREIIKLGERTREIGYSLIPLKLYLKHGQCKVLLGVARGKKIHDKRQALKDKAMKRDVDRAIKARY
2016161..2016172                   attR                                                                                 N/A                 ACAATTTGAAAA

#### region 3 ####
2388363..2388374                   attL                                                                                 N/A                 CACTTATATTCT
complement(2392005..2392574)       PHAGE_Staphy_PT1028_NC_007045: ORF009; JMUB0001_2283; phage(gi66395173)              4.45e-81            StaphylococcuscapitisMSTLNPRQEKFVAEYLKTLNVTQSAIKAGYSPHTASEQGSRLLKNKKVAKYIDEQRKRVIDEGVLSANELLHILSNAAVGDESEVREVVVKRGEFQRNPDTDRMNLVYNEHVEMVEVPIKPSDRLRARDMLGKYHKLFIDKKELSTDTPIFINIGEWPEDEEEQQQLIDSVGEEHPNRPILVDNIPTKD
complement(2392576..2392917)       PHAGE_Staphy_PT1028_NC_007045: ORF014; JMUB0001_2284; phage(gi66395178)              2.06e-06            StaphylococcuscapitisMSYDREAIKQFIRDYSKENHDTTFNDENTNIDDFFTLNEDVESMNIVDVGQQAFFNELDQYIYATCTSREHLLFIMLCEGQSLKRIADILMITKSRVYQIYSDLLDKLENKEG
complement(2392914..2393351)       PHAGE_Staphy_PT1028_NC_007045: ORF010; JMUB0001_2285; phage(gi66395174)              5.94e-38            StaphylococcuscapitisMNLRRVKYPLIYHENKISEYTLLTEYNPKFINTKIKAITMQIEMMYHLNISHMTTNDVHGVVSISYPLEKLVIDIIGEKEKLKRFKTKANRNMQQLKQVIKRYTPGEQKEIMYYMQANGSTIDYDLIERLQRDLYKLRQKVSVRA
complement(2393403..2393615)       hypothetical protein; JMUB0001_2286                                                  N/A                 StaphylococcuscapitisMARKYNLDKVSNYLLTETTLSADETQKVLDVVEEQFSQNIREQKKDELSQKSQRDVRLMRMAEENRIVKK
complement(2393615..2394202)       pathogenicity island protein; JMUB0001_2287                                          N/A                 StaphylococcuscapitisMKTAKYFDEYNEYVTGQRENINKIENERQELSQRIKEDKAKYKELIANSQDDEADALYTTFDSNEKKLKALEKRLSTKKEVFDEARRKKAIELIKHQADLPHLYKKDKERILAKFEPIVEEYNKVVDEIAALNDEYEYEFYRFVKPYDKENFEKDKEVRAEIKNHFNPNKYSNYVSGDELPFIDIRNKMQLRGAK
complement(2394217..2394969)       PHAGE_Staphy_PT1028_NC_007045: ORF010; JMUB0001_2288; phage(gi66395174)              1.13e-18            StaphylococcuscapitisMSAAIEIIQEKVSDYELFTRFNTYYIQSRIALIESDIEDMYNRTAPSLCSDTVSESIYYESYSVENLAIAILEERQKLERYKSRSQRDLNAFYTVLGRFSTKEQKYIKNYINTRSEAHINVIERFKIELYKYIQTNRNERNKGIENNYSYINDKHQKLKTYPHKLTLNQEKALREQEDGATEKNMNNDEFEAKLNDLDKKSFKEFIYNRNENNIDFEKVLILLQTIPKRLPQKEIKKPYNYIREIGLKTN
complement(2394979..2395311)       PHAGE_Staphy_PT1028_NC_007045: ORF015; JMUB0001_2289; phage(gi66395179)              1.66e-37            StaphylococcuscapitisMTITIEKELTNDHIRVLNVLRNTKHEIITKQNIFNQLNMEFNRNNDRWLRNTINSLVVDYGYPIGYSYKKDARGYFMVKSEEQKELALRSIKRHIEGSLKRYEALKKTEI
complement(2395670..2396254)       hypothetical protein; JMUB0001_2290                                                  N/A                 StaphylococcuscapitisMTIINKDIKDLNLTDDVLIEFLKFREEDYTLYSNERVFIDCDDNVVGNLYPLVIALDLNKPYVTCEVVEETTITYYDKNIIPTIPYKWDNSKAKYINICLELEQVEEHFEFAAWKLYCVLNGINLKNYDKYKWVLERIKRTPDDMPNADMPISRAYEIAQLPKNLIERTYNVNGKSKPIYKMNIKQIKNIKEYV
complement(2396251..2396895)       PHAGE_Staphy_PT1028_NC_007045: ORF008; JMUB0001_2291; phage(gi66395172)              6.85e-108           StaphylococcuscapitisMNVEIIANQFETRAATLLRYYTGLLESSRKTHFAFKIYNDPFDMVYVMMNGKLFGHVYIQDCNVRQSFELASYKHTEGLIRSIEGYYAGYDIEDDKHISISDMMARFMFDNDYFMYGLETFAESNNTDMFTYIEGGLNVEELEGVQSSNADVIGNMEVLYQLATGINEPAPELVEGLKIITEFIQNEKANEVDSKVLIERLNELKHSYYNGVSQ
complement(2396897..2397178)       PHAGE_Staphy_StB27_NC_019914: hypothetical protein; JMUB0001_2292; phage(gi431809698)     8.58e-10            StaphylococcuscapitisMNKKDEIYSRLDYDAPIQLIPAPENLFVEYIDGEEIWYSPIVCMALTKAHHINFYDSDDMGCIDKAPARYIKKFNPKTGEFEQFSKTKNEGDE
complement(2397180..2397542)       PHAGE_Staphy_PT1028_NC_007045: ORF013; JMUB0001_2293; phage(gi66395177)              8.92e-11            StaphylococcuscapitisMTKNELKSEILEYIESHDGTTFVEIENVFEENNFNYKGDGAYTSGQHPNVVFWIGWNQEAFNIIAELKRDGLIEMDICPPIIYLVDGKGLDLPIVKSKYIKTDHWLPVAFNICKKEMECV
complement(2397814..2399301)       PHAGE_Staphy_tp310_2_NC_009762: hypothetical protein; JMUB0001_2294; phage(gi156603988)     1.25e-92            StaphylococcuscapitisMEDVTKEEVFELIDENNFLANSDDWRSKLRRSATTQALKKTTANAELIMENDESLKGLVQYDSFEKITKLKRLPYWRTKDDNNYYWADIDTTHVISHIDRYYNVQFSRDIMDSVIEKEAYHNKFHPIKSMIESKTWDGNKRIETLFIDYLGAEDNHYNREVTKKWMMGAVARIYHPGIKYDSMIILYGGQGDGKSTTVSKLGGHWYNQSLKTFKGDESYKKIQGSWLCEIEELAAFQKSTIEDIKSFISAIVDIYRASYGKRIERHPRQCVFIGTTNNYEFLKDQTGNRRFFPITTDKNKATKSPFDDLTQDIVQQMFAEAKVYFDDDPTDKALLLDKEASETALKVQEEHSEKDALVGEIEEFLERPIPSDYWYRTLEEKRISAHDVIDQEYIKLYGDGKLIELSNTKPGAYVWRDKVCSMEIWKVMMKRDDQPQQHHLRKIDKALRNTRYCGQSKSRYRFGEGIGRQYGFQIDLSSYYRDLKNENNNKGTTGQ
complement(2399314..2400186)       PHAGE_Staphy_PT1028_NC_007045: ORF003; JMUB0001_2295; phage(gi66395167)              7.79e-73            StaphylococcuscapitisMDFQKVKLNNDFKIQIVQYKNLYSNSCNGSGLCEWSKWLDKLQIPRINSDKYIRGLCVYGDFEDVEKDNQTISKYRSDQTLINRTAITLDYDEIKDFRGLYEALKAKLEHVSWVFHTTYSYTVEKPRIRLIVPLNEPVSASDYRKYSNGLARYIGYPVDEASFVPSQAMALPVKKSKDSIYIFKYNDAPAIKKEELNKMVVKNAPITVDYSNHFHKRNSSYWREIAFGVGEGERNQTLASLTGYLLRRYVDANLVYGLVSAWAMTCRPPIEQKEVNRTFKSILKKDSKNK
complement(2400284..2400622)       hypothetical protein; JMUB0001_2296                                                  N/A                 StaphylococcuscapitisMKDLKFHVSELKNSFVDAELNSKLNTVITLIGEEMNRGEEYKSLLDKQNKPTESYIVKEHINHNYVVMAVLNSILKDVDAIEEEIKNEFVNAMEQIEKCASDVSLATESDNA
complement(2400624..2400983)       pathogenicity island protein; JMUB0001_2297                                          N/A                 StaphylococcuscapitisMKNLTKNDYKNIESKVSGDLIFKDKKHIKKMTKLLQKRRNKDISIIKKMYPYLNNNEILEITNDYQEYKNLVQATETFTDFPIIYGDSNIHKFITKEDVEDLKLAIEEMTSFIEKLEEY
complement(2401002..2401274)       PHAGE_Staphy_PT1028_NC_007045: ORF019; JMUB0001_2298; phage(gi66395183)              3.15e-27            StaphylococcuscapitisMPRTKLQDIPTKQNTALEEKQIVFPVKYAKPKLICEIFNISYSTFYRLLKSYEDDNLSIEDMYIDISSTLTLVNVEQFEKYLKAKHKKYL
complement(2401275..2401487)       PHAGE_Staphy_PT1028_NC_007045: ORF020; JMUB0001_2299; phage(gi66395184)              1.77e-22            StaphylococcuscapitisMRNNLSMIMGKKRVTATKLSEDTGVSRTTIHELYHEKQINPSFSTVLKLCKALDVTLNEFFGIDEKEGVK
2401631..2402326                   PHAGE_Staphy_PT1028_NC_007045: ORF006; JMUB0001_2300; phage(gi66395170)              1.89e-17            StaphylococcuscapitisMKFGDILKEYRKQLKLSVNQLSKLSNVSVGYISKLENNKRKFPTIRTLFLLLVGFKNSKINDQSKSKQDVDSEIKDILNEFISAEDSDIDIEELENLYNDFTTFYEDMHKKVGNKDERNKKKNIFVYEDDEKEKHSVNLEKPINDIAFHLKDNENQKFYNGVMLNEYDKNMINQIINSFLVTKLSQEQVDLSEDIEQLQKDFNNFKKESMLNKKQLKMFAIHNNIQSLKDK
2402360..2403676                   PHAGE_Strept_EJ_1_NC_005294: hypothetical protein; JMUB0001_2301; phage(gi39653677)     1.27e-90            StaphylococcuscapitisMNSVNNKWMIWTIFGASLFSIATPGIAIIPTILSLILALKFIITDKKILPDVLQFQKEFNNIKSLRKSKENLKIELESLEENLQGKKSELKEVQSLLNEAELEYDYKLIYPFDLDILDSLEINNLIEKLTLKEKQMLNVDNIVKSTGLKGEDKKFYKNQVKQITRLFNAETSIILKKVTAKNFKVCQKQILTAFESINKILETDAVKISEEILDIKLEKLTLIYKYQIKLEDEQILRREERERIKEENKVKKELEYKLNQIDKDIKHHNNELIKLNKYIAKANSDVEKEMYIEKINQLEEKLNELTVNKEFVLERQVKAQSGYVYIISNIGSFGENIYKIGVTRRLEPLERIKELSSASVPFEFDVHALIFSDNAFALEDRLHKHFKEQQVNKVNSRKEFYNIDLNEIKDLIHSEYDNTVEFTFEPKAEQYRESLLIS
2403462..2403473                   attR                                                                                 N/A                 CACTTATATTCT
2403698..2404915                   PHAGE_Staphy_tp310_2_NC_009762: integrase; JMUB0001_2302; phage(gi156603950)         5.61e-128           StaphylococcuscapitisMWHEKFTNKHGETKYRYYEKYKDPLTNKWRRVSVVLNKNGKQSQKEAQKRLNERIEAKLNDKTPTNLKTLTFHAACDEWFERYKLTSGSKQSTITTKSYKVAHIKRNIDKDILVENMNADVLQNLINSSLTEGLSHKVVKDDLSIIKNIIRYTQKKYNITDISYIDDVIVPKKATTIEEVKAKRENYLEMNEVHLIAEELKHIANNKRASYMKRSYLFTAYIIEFQVLNGMRIGELLAIQPENIDFKNKKLIIDGTIHWRKERNNVGFKDTTKTASSYRTISLTTRSCDILRKVMLENKKAVQWEKMYVDRDFIFTNHRGNPLSLTSINRNIQIAAKNVGIEKHITSHTMRHSHISLLSQLGISLRAIMDRVGHTDHKTTLQIYSHVTEQMDKDMMNKLETINIV
complement(2405060..2406601)       GMP synthase; JMUB0001_2303                                                          N/A                 StaphylococcuscapitisMEMAKEQELILVLDFGSQYNQLITRRIREMGVYSELHDHEISIEEIKRMNPKGIILSGGPNSVYEEGSFTIDPEIYNLGIPVLGICYGMQLTTKLLGGKVERANEREYGKAIINAKSDELFFGLPSEQTVWMSHSDKVIEIPEGFEVIADSPSTNYAAIEDKSRRIYGVQFHPEVRHTEYGNDLLRNFVRRVCNCTGEWTMENFIEIEIEKIREQVGDRKVLCAMSGGVDSSVVAVLLHKAIGDQLTCIFVDHGLLRKGEGDMVMEQFGEGFDMNIIRVNAQDRFMDKLKGVSDPEQKRKIIGNEFVYVFDDEAAKLTDVDFLAQGTLYTDVIESGTKTAQTIKSHHNVGGLPEDMEFELIEPINTLFKDEVRALGIELGIPEHLVWRQPFPGPGLGIRVLGEITEDKLEIVRESDAILREVVREEGLERDIWQYFTVLPGIQSVGVMGDYRTYDHTVGIRAVTSIDGMTSDFARIDWEVLQKISSRIVNEVDHVNRVVYDITSKPPSTIEWE
complement(2406780..2408246)       PHAGE_Staphy_42E_NC_007052: ORF012; JMUB0001_2304; phage(gi66395520)                 1.25e-43            StaphylococcuscapitisMWENKFAKESLTFDDVLLIPAESNVLPSDVDLSVELSDKIKLNIPVISAGMDTVTESKMAIAMARQGGLGVIHKNMGIEEQADEVQKVKRSENGVISNPFFLTPDESVYEAEALMGKYRISGVPIVDNDSDRNLVGIITNRDLRFIEDFSIKISDVMTKEGLITAPVGTTLDEAEAILQEHKIEKLPLVENGKLKGLITIKDIEKVLEFPHAAKDEYGRLLAAAAIGTSKDTEIRAQKLVEAGVDALIIDTAHGHSKGVIDQVKHIKDTYPEVTVVAGNVATAEATRALFEAGADVVKVGIGPGSICTTRVVAGVGVPQITAVYDCATEARKHGKAIIADGGIKFSGDIIKALAAGGHAVMLGSLLAGTEESPGATEVFQGRQYKVYRGMGSLGAMEKGSNDRYFQEDKAPRKFVPEGIEGRTAYKGPLQDTVYQLMGGVRAGMGYTGSKDLKALREEAQFTRMGPAGLAESHPHNVQITKESPNYSF
