gi|00000000|ref|AP017368.1|  Candidatus Desulfovibrio trichonymphae DNA, complete genome, 1410056, gc%: 54.82%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

#### region 1 ####
781136..781147                     attL                                                                                 N/A                 CGGTAAAGCCGG
791348..791512                     PHAGE_Citrob_Miller_NC_025414: methyltransferase; RSDT_pg_102; phage(gi713322141)     5.81e-09            RPITHREAARLMGFPDDFQFTGTKIEIAKQIGNAVPPPLARAVARHVRKLLDSWS
complement(791516..792430)         PHAGE_Gordon_BritBrat_NC_030942: hypothetical protein; RSDT_pg_103; phage(gi100086)     1.52e-06            MAKHPRPGNPEKYRLQLIELLENFEEHLKSSELREQVLQLVPAIDLLQNIGSSLIQGSDGNSAQSRILAYLRKYPGLNHYWRRIDGRSRDFRICKTYQRIESSMWCYSKYGSRGYFRSVRRGSSTHQTGSIHFAVRRRSGCRFPLESRQRDTKRAYGHANSKIPSPKRRPGNHRRRIAICGRSDMTEMGWPIVTHTNGRPDLPVGIYVLEEDRQAPQASEHDRQIPDAVRRAVLVRDHYICKDCGWTHDQWNSSDSRHLEAHYLEAHHITAHADGGSNTESNLVTLCNICHDVRHRKT
complement(792430..792852)         PHAGE_Burkho_KL3_NC_015266: gp46; RSDT_0601; phage(gi327198091)                      8.82e-47            MDKISRETRSRNMANIKGKNTKPEKLVRSVLHGMGFRFRLHVKKLPGSPDIVLPRYKSLIFVHGCFWHGHEGCKRATIPTTRADFWRTKISSNKERDAQNLADLAKLGYRCLIIWQCEMKDTAILKQRLSTFLHDTASLS
complement(793405..793614)         AlpA-like phage transcriptional regulator; RSDT_0602                                 N/A                 MSTVIPATGFLRLRQILDILPISKSSWWEGCKTGRYPEPVKLGLRTTAWRAEDIAALVQTLGNRNNKEK
complement(793801..794175)         PHAGE_Stenot_S1_NC_011589: putative integrase; RSDT_pg_104; phage(gi213163927)       6.45e-23            MLNDTLIKSLKAAETPEKYFDGGGLFLFVPVTGSKLWRMAYRYNKKSKLLSFGEYPTVSLKSARERRDEAKKLLADDIDPRLHKKNLRAARLADEANSFQNIAMEWYENQTLNHTEKHRGHIIFR
complement(794416..794492)         tRNA                                                                                 N/A                 GTCCCCATCGTCTAGTCGGCCCAGGACAACGGCCTTTCACGCCGTCAGCAGCGGTTCAAATCCCTTGGGGGACGCCA
794675..795415                     PHAGE_Sinorh_phiM12_NC_027204: rare lipoprotein A; RSDT_0603; phage(gi828805818)     1.88e-20            MIYIRNLFILFVLICFALALPVISDAALRKDISTKSYTVKKHKSTNVAKSDSTKHNVKGKSTAANSKSKSVAKDSMSRTDSREVWFRRAKENGELLAGMATWYGGKAHGGPTASGLDYDMFTFTAAHRTLPIGTVVKVTDQDNGKSVIVCITDRGPYWRGRIIDLSYAAALQLDLSNRGVGRVNLNVISDEHGTPLNADEAFYVRYSNARDSEMAGPFRAFADAAVLHEALRQAHPEAEVVIGENK
complement(795640..795716)         tRNA                                                                                 N/A                 GTCCCCATCGTCTAGTCGGCCCAGGACAACGGCCTTTCACGCCGTCAACAGCGGTTCAAATCCGCTTGGGGACACCA
complement(795722..795796)         tRNA                                                                                 N/A                 TGGGCTGTCGTTCAATTGGCAGGACGGCGGATTCTGGCTCCGCTAATCAAGGTTCGAGTCCTTGCAGCCCAGCCA
complement(796094..796933)         hydroxymethylbutenyl pyrophosphate reductase; RSDT_0604                              N/A                 MNVIRAKTAGFCMGVSLALQTLDSTLHEKNRICTLGPIIHNPQVLAAYEAQGVVCVRDASQLRFGDRVIIRAHGLPLQDEAAARARGAIVVDATCPRVKKAQLSIARATRHGASLLLFGEAEHPEVRGLISYTHATAHVFSNREELEPLCFGTRPHCVLASQTTQDCNTFIQLERILRARFPDLVVLSTICDATSSRQEEARAIAANVDVMVVVGGRQSGNTRRLVDVAALSGIETFLVESADELDAKKFLQKTRVGLTAGASTPKSLIDATELWLTSL
complement(796914..797960)         tRNA-dihydrouridine synthase; RSDT_0605                                              N/A                 MTLSKWDNKMSPSPDASLPTGRDKPWLAPLAGFSDLPFRLLCREYGAAVCATEMVSAKGLVYGNPGTHDLLATLPEDRPLVVQLFGAEADFLLRAVTLLCESGYNWFDLNMGCSVPKVLRQGAGAAMLGNPDNALRAAKAMLTAAGKSKVGFKLRLGLGTDQPPLSGLVDFVLRLEDMGAGWITLHPRTAKQGFGGTMNHTVLAKLAQRLSLPLLASGDLFSAEDGIRCLEHSGVAGVMYARGAMHNPAVFADHLALFRGCPPRNPDAGRLRALIVRHITLARRLSPGKAALLKMRTVIPRYVRALPGARTLCDRLCRCSDWRELDRALNFFWPAVEQQENAHERHTS
complement(798143..799456)         PROPHAGE_Escher_Sakai: ATP-dependent protease ATP-binding subunit HslU; RSDT_0606; phage(gi15834112)     1.30e-165           MSALTPREIVAELDKFVIKQEQAKRMVAVAVRNRWRRSRLAPGLRDEVAPKNIIMMGPTGVGKTEIARRLARLSGAPFLKVEATKFTEVGYVGRDVESMVRDLMEIGVHLVQEEENGRVRKAAEAAAESSLMDLLLPNSFAQEERGATREKLLRQFRLGFLDDREVEIEVTEQSGPAIDIFAIPGMEQMGGQIKSMFGKAFPPRQRNRKMKIRDAFNVLVQEESGKLVDQEAIADMARERVEQSGIIFIDEIDKIASSSQNRTSDISREGVQRDLLPIVEGSSVNTKYGMVRTDHILFIAAGAFHFNKPSDMIPELQGRFPLRVELQALGKDEFLRILTEPDNALTKQYAALLTTEDIALSFTDDGLEEIAAFAEETNSRLENIGARRLYTIMEKILADISFDAPDMPGAKVLVNRDFVTGHLEDVIKDQDLRQYIL
799807..799818                     attR                                                                                 N/A                 CGGTAAAGCCGG

#### region 2 ####
1107140..1108480                   PHAGE_Salisa_1_NC_017983: gp40; RSDT_0826; phage(gi388570749)                        3.37e-06            MSKTREVYVCSVCKAQTPQWRGQCPNCRAWNTLEAVAVARGSAGLKPAGAVLAKVRPIALCDVADVGHAPYGSGLAALDRVLGNGLMPGAGILVGGEPGIGKSTLLLQVAGLVAKQARPVLYATGEESLPQIKARAERLGLLDPHLTALATTRVEDVLNALAVGRHALLVLDSVQTMTSLEAEGLPGNVSQVRAVATMLLETCRRTGVTLILVGHVTKDGVLAGPRLLEHTVDTVVSLEGDRRHTFRLLRVFKNRFGPNEELLVFRMGTDGMRVVDDPSTFFLDARDPSLSGTAVVMAVDGQRPLAVEVQALVAHTFLSIPRRTALGFDVNRLHLLLAVLEKRLKLSFNQVDIYAKVGGGMRLQEPGLDLALVAAVLSSYYDVPLPEKCVLWGEVDLNGQVRPVTAQEARLAQARRLGYIPIVYPDASAGGIATVAALQQQLFRRH
1108528..1109157                   PHAGE_Strept_mu1/6_NC_007967: hypothetical protein; RSDT_0827; phage(gi93007409)     6.88e-05            MSLEIERKYLQVDFDVVRAALKAQGAHNLGAHFERNDIFDTPSAELVAGSRLLRLRTQEWPGKTRYMLTLKLPAEQQGARFKVREEHELEVVHDLGMRSVLEGLGFRVTARYEKIREQWRWEDMEADLDVLPFMTAVELEGEAEHILRVAWRLGFGEGQASIKSYHDLHQEWQRQNSMPPSLSFVFSEEQRRFWRQKLGLPEGVSHAAA
1109144..1109458                   PHAGE_Cronob_vB_CsaM_GAP32_NC_019401: ATP-dependent Clp protease; RSDT_0828; phage(gi414087232)     6.72e-05            MPLHRPDCDDNAQVVVEKKLKEPDRYRVLLHNDDYTSMDFVVGVLCGIFHKTLEQATSIMLAVHQHGIGQCGVYTREVAEARVNQVHFKARKAGFPLRCTMEKA
1109505..1111766                   PROPHAGE_Escher_EDL933: ATP-dependent Clp protease ATP-binding subunit; RSDT_0829; phage(gi15800640)     0.0                 MLSHDVQVVLRDALLEVHRRRQDLLTVEHLLYALTNSTKGRIVLDGSGVGVAVLREQLEGFFHSELTSVETAGDYEVTQTAGVQRVLKRAISHIRSAGRARMEIEDLLIAILDEEESYAVYYLRRQGVERLDVLTFVSHGLGDGAGSRGITAKNDETKDSADVLAKYTVDLTAHARAGKIDPLVGRGEELERAMEVLCRRRKNNPLFVGDPGVGKTALAEGLALRIVEGRVPPLFADARLFALDMGLVLAGTRYRGDFENRLKAVIQALKAMPDAVLCIDEIHTLVGAGATSGGSMDASNLLKPALANGDIRCIGSTTYEEYRNHLEKDRALARRFQRIDLHEPSTEDCLAILKGLSGRYAEHHHVCYSQAVLKTIVNLASRHIRNRLLPDKAIDVMDEAGALVRLGRHAERADAATRRPTVSTDDVERVVARIAGIPLRSVSGRERARLANLERDLKNLVFGQDEAVALTVRAILRARAGLGGERRPAGAFLFYGPTGVGKTEVARSLARLLDVEFLRYDMSEYMEKHAVARLIGTPPGYVGFDQGGMLTEAVRKTPYSVVLLDELEKAHPDIFNVLLQVMDYATLTDSTGRKADFSHVIVIMTSNAGAFEMAKANIGFGDADPRDAAHKALKTVENIFTPEFRNRLDALVPFRTLTPEMMLRIVDKFVAELRESLQQRNVRLSVTAKAREKLARQGFDPSMGARPLRRLIRGELEDRLANELLFGTLKKGGAASLTCRGDGFALVPVAARH
1111777..1113795                   PHAGE_Entero_CAjan_NC_028776: helicase-like protein; RSDT_0830; phage(gi971742387)     1.65e-07            MDSVSFLLETDYTPMGDQPKAIAALADNLHAGVRAQMLLGVTASGKTFTMANVIAKCGRPALVLAPNKTLAAQLYNEFRELFPHNAVEYFVSYYDYYQPEAYVPASDTYIEKDSSVNDNIDKLRHAATHALLTRRDVVIVASVSCIYGLGSPEYYARMVIPVEVGQHLSMDSLISRLVEVHYERNDYDLHRGAFRVRGDALEIIPAYHHEQALRLEFFGDELDAMREIDPLTGKVLSETAKTVLFPASHFVSARDNLQRAANDIHLELSERLAWFKDQDKLVEAQRLKQRTQLDLEMIEELGYCNGIENYTRHLDGRRPGEPPACLFNYFPPDFLLFIDESHITVPQVGGMYRGDRSRKQTLVDYGFRLPSALDNRPLRFEEFTALINQVVFVSATPGRYELDEAQGVVAEQIIRPTGLLDPLTDVRPVTGQMENLLSECRARATRGERVLVTTLTKRMAEDLTEYCCNMGVKARYLHSDIDTLERMQIIRSLRLGEFDMLVGINLLREGLDIPEVSLVCILDADKEGFLRSAGSLIQTFGRAARNVNGQVILYADTMTVSMKAALDETCRRRAKQSAYNIAHDITPQSTKKSLESPLNTLYVGKNVAGRRRGRGRDKAQDAPPGTAEEAAACALALEKEMRQAARELEFELAAELRDRIRALQAQFITLPE
complement(1114000..1114734)       PHAGE_Mycoba_Dante_NC_028946: hypothetical protein; RSDT_pg_143; phage(gi971759382)     8.13e-09            MATTTIEWTKASWNPVTGCTKISPGCKNGYAERIAMSSCYGEKLKHVFSNSTATYAQPASLMESPSPNFCELHERSFPRYTTYLYPTGSWSNAASETAYFSGTHQKKPAIAYAFSNQLACLDGDYCRKLRGYKQDSSGNRCENIPLLTLAVFSWRNPYRHLADSGRRIRAAITPYARLGHRAVISVSSDTAFFFKQWGGIHKKKAGRMLDGPFNQITSKNEERCCQFSL

#### region 3 ####
complement(1265119..1266294)       PHAGE_Erwini_vB_EamM_Asesino_NC_031107: chaperone for long tail fiber formation; RSDT_0967; phage(gi100168)     4.78e-07            MIGISKLYCGQAEASDALRYGRESCKLSSHLLQFSKDKKPVIVWNMTRRCNLKCVHCYAHATTMEGADDIDTERAKNMIDDLAAYGAPVMLFSGGEPLARKDLTDLARHVTRKGMRAVISTNGTLITPQKARELKEVGLSYVGISLDGLEDVHDRFRSVPGAFRKALDGIANCQTEGLKVGLRFTINKRNISEIPGIFRLLKEKDIPRACFYHLVYSGRGSDLIREDLDHNATRKTLDLIMDETRALFDAGHPKEILTVDNHADGPYVWMRLAREDKKRADEVYTLLQFNGGNSSGHGIGCISWDGKVHADQFWREHVFGNVLERPFSTIWDDPSIELLHKLKNKKAYVSGRCAKCRHLNICGGNFRARAEAFYGDAWAEDPACYLTDEEI
complement(1266450..1269140)       alanyl-tRNA synthetase; RSDT_0968                                                    N/A                 MLTAKEIRRRYLDFFHRLGHEITPSAPLIPPNDPSLLFTNAGMVQFKKIFLGEEKRPCRRAVSCQKCLRVSGKHNDLENVGRTARHHTFFEMLGNFSFGDYFKREAITWAWEFVVGELELPKDKLWVTIFRDDDAAAGLWQEIAGLPQERIVRMGEKDNFWTMGDTGPCGPCSEIYIDQGADMSCGPDCGIGKCDCDRFLEIWNLVFTQFDQSTDGSRALLASPNIDTGMGLERIAAVCQGQKSNFDCDLFQQIIQRAAELAGVAYSFSTPDTNDVDTALRVIADHSRAAAFLIAGGVLPSNENWGYVLRRLIRRALRFATLMGVHEPFLYKVARTTTAVMGDDYPELRQNAGFIARAVFEEEQRFSQTLEKGLSLLEEELQRLAAAGYGEISGDFCFQLYDTYGFPLDIVTDVAGKRGFTVDGAGFETNMRAQRERSRQSRKNDMCALDEKNRSALDAAFARLKDDDLQSHFVGYECLTVQSRIVALLDADGLPAGCLDHGQKGFFVAGRTPFYGESGGQMGDKGLVRSATGQARVINTRHPSPELIVHDIEVFRNTLYADQEVILHVDADERTAAARNHTCTHLLHAALRRTLGTHVKQAGSLADSRRVRFDFSHITALTPEELAAVERDVNRAILANLPLTTRAMPREQALAAGAMALFGEKYGDTVRVVSIGDNDMPESVELCGGTHLACTGQAGIFLITAETGVAAGRRRIEAVTGWNAYSVALEQRAELNSLSAMLKSRPGQLTERVQAMSADIKTLRKASDKAAAATASGADIVKQAEVVNGITLLAARLDNVPVKALREIMDDVRSRLAEKIVICLATVEDGKVGLLVCISKDLHCRFTAPVLIKDVAAFCGGSGGGRPDMAQAGGTKPEGLPAAFAALKQIVNNISL
complement(1269156..1270244)       PROPHAGE_Escher_MG1655: DNA strand exchange and recombination protein with protease and nuclease activity; RSDT_0969; phage(gi16130606)     1.80e-134           MAKKNVSAENARAEALSTALATIERKYGKGAVMKLSDEAHVNIPVIPTGSIGLDLALGVGGIPRGRITEIFGPESSGKTTLTLHIIAECQKLGGACAFVDAEHALDVAYAKRLGVNTDDLLISQPDYGEQALDIADMLVRSGAVDLVVVDSVAALIPQAELEGDMGETQVGGHARLMSHAMRRLTGTIHKSRTSVIFINQIRMKIGVQGYGSPETTTGGNALKFYASVRMDIRRIQTLKDKEESFGSRTRVKVVKNKVAPPFRSAVFDILYGQGISRSGELLDIGIDAGIIEQSGSWFAFGAEKLGHGHEKVRALLDANETLRLEIEKVVIEHLGIHPGAFAPAADRDTAAQASFSAVPDTD
1270467..1271252                   PHAGE_Entero_EF62phi_NC_017732: chromosome partitioning ATPase; RSDT_0970; phage(gi384519759)     2.38e-17            MTRIISIANQKGGVGKTTTAINLSAALAVMEKKVLLVDCDPQANSTSGVSLVQKEFTDDLYSTLYSPENVRQSIASVRPPYLDILPGSTNLVGAELELVDKIGREFYVDECLKQIKNYYDYIILDCPPSLGLLTLNALCAAGELLIPLQCEFFALEGIVKLLQTYEQIKKRLNPNLCLLGVVLTMYDIRNRLTRQVKNEVRRCFPDHLFETAIPRNVRLSEAPSHGKSIIHYDIKSKGAEAYLGLAKEVVLRRPTKKQTIL
1271289..1272257                   PHAGE_Gordon_Nyceirae_NC_031004: hypothetical protein; RSDT_0971; phage(gi100046)     7.08e-15            MNKGLGRGLDALLAGAGAKLEENTSVKLLPITALTPNPDQPRQYFDAQALKELADSIKIQGVIQPLLVRPMPDGKTWQIVAGERRWRAAQAAGLKQVPVFVRILSGQEAMAAALIENLQREDLNPMEEARALQALRETMGLTQEETAARLGKSRPAVANALRLLQLSPQAQDDLRTARISAGHARCLLSIDNANTADAMREDIITRQLTVRETEEAVAAWHKTGRLPWKQSIGDGTVTMDKRAGSRKRKTAELRTLQNSLSTHFACCARISGDEHCGHITLNYASREELQGLLERMGVLPQNVKTSQKIMKGRQERAAPHRP
complement(1272227..1273213)       PHAGE_Prochl_P_SSM7_NC_015290: PRGA-formyltransferase; RSDT_0972; phage(gi326784531)     8.58e-09            MAAPQKARIVFMGTPEFAARILRGLLFWPKGRVVAVYTRPDRPAGRGHKIAVSPVKVLALASSLPVIQPLHFNSTAAFDELAAFAPDFLAVAAYGMILPDRIIAVPRLAPLNVHASLLPLYRGAAPVQRALMENWHDGAVTGVSVMHMVSQLDAGPVYAVQTVPISDSTAGQMQDLLAQEGSRLLCAVMDDLLSGRANPGKQDSDKASYAAKIRKKDLIINWNLPALAVHAHLRALAPWPSARALFRFVGWTDDWSLLLFPGFPGDPLTGETPGVLSHTRHALAVACADRWYELDLVRPEGSATMSVRDFVNGRLRGMPYGLCGAALS
complement(1273186..1273704)       PHAGE_Synech_S_CAM7_NC_031927: baseplate tail tube cap; RSDT_0973; phage(gi100216)     1.66e-20            MILDILTYPDPRLARMCEKISEITPEICALADDMLETMYAARGVGLAAPQVGHAIRMLLIDPSRGGAPSAPRILVNPVLELSGEDVASEQEGCLSVPLDYRADIVRKSRVLLTATDIDGNSIVEELLDFPAIVLQHEYDHLDGVLFIDRLSRLRRVLFDGKMKKWLHRKKRA
