gi|00000000|ref|AP017977.1|  Neochlamydia sp. S13 DNA, complete genome. 2586667, gc%: 38.04%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
1276124..1276137                   attL                                                                                 N/A                 AAAAATGTTTCTAT
1277180..1277217                   attL                                                                                 N/A                 ACTTTAAGCCTATTTTGATAAGCAATCAATAATACACT
1277717..1278121                   Integrase; NCS13_1_0982                                                              N/A                 NeochlamydiaspS13MIELQQVIFRLKLKQSIRSINRDTGIHRTIIRNLNKVANNSGWLSNDRSIPSENEIHQALVAFNLKKSSKSHDLDPFKPLIKDWLAKDHSFVVIHKLIQEHITCSESTVRRFIHQHFPKQIQPIIDLFRNWNKM
1278162..1278599                   PROPHAGE_Strept_2603V/R: IS1381 transposase protein A; NCS13_1_0983; phage(gi22537126)     5.77e-31            NeochlamydiaspS13MKFDKIEKLDDERFRRLTGVKRNTFDKMVQILQQADMAKKSKGGRKYKLRLEDMLLMTLEYIREYRTYFHISQSYGISESSAYKAVKWIEDTLIKHPDFALPGRKELLKSDTEYEVILVDATETPIERPKKNKSAIIQGKRKNIP
1278776..1278988                   PROPHAGE_Strept_2603V/R: IS1381 transposase protein B; NCS13_1_0984; phage(gi22537127)     2.75e-19            NeochlamydiaspS13MPKKKSKKKPLTKEDKRTNQSLSRERVANENVIGLLKRFKIIADRYRNRRKRFALRFNLIAAIYNWELNE
1279006..1280181                   PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposase; NCS13_1_0985; phage(gi557307612)     1.18e-17            NeochlamydiaspS13MIRQHIPGECAEVDFGYLGLCFDPDSGKNRRAWVFSLRLRHSRKAYREVVFDQSTKTFLACHIHAFEWLGGVPTKIVIDNLKAGVTKASLHEPLLNRSYQQLAEHYAFIISPCLPYKPQHKGGVENDIKYIKRNFLSFFLESQAQKGIEVPSKGDFQKALDQWNCEVSEKRKIGGVDRTPQDLFEEEKEHLKSLPSCRWDALEWYCTMVGKDWRVRFDKVWYSVPYAFIGKEVQVCASQSSLKIFHAGQEIAMHLRSYKLNDYVRANLHAPLQQEEVLNATRGGLLAQAETIGPFTLKLSEELLNDPSHDKLRPVRLILKFALRYSPDRLEKACQRALIYGTISYTSIKAILEKALDQKPFEEQSTQLDKPQKYFKFARDPQYFTQGAMYG
1280174..1280530                   PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposition protein; NCS13_1_0986; phage(gi557307613)     2.42e-13            NeochlamydiaspS13MDEMILLKSKLNKLKLPKLLETLQERLKQAIKEKWSYSQFLDILLTDEMDRRNQSQFAKKLVKSHLQVNKTLETFDFSFNTKIYEPILKELATCHFVENKECVLIIGPLTSTLFCVSI
complement(1280596..1282272)       Transposase, IS4 family; NCS13_1_0987                                                N/A                 NeochlamydiaspS13MFVRVKTTPNSPRKSVQIVESVRDGEKVKQRIVRYVGIAMDEQELKKMVELAEHIKSKIEHQHDPTLFGPEEMAQQAIKSKNMSKLNDEELNVNLKNLEEEQRAIVGIHEIYGKIYEELGFGNILKNTSSAEILKHIVMARIANPVSKRASVRQLEQDFGIQINLQGVYRMMDCLNQQAQQAIQDCAYNTAKELFGQKIDLIFFDANTLYFESFQEDEFKQNGYSKDLKFNQPQVLISLMVTKQGMPIGYQAFPGSTYEGHTLMPILEKVKANYQLDKVIFVGDSGILNSANLLALEQAKYEYIIGARLKNQKTEIKKKILDLNAYATYPENGQTRLTAIYLDEDHRLIVTHNASRAKKDAYDREKALNKLIEKLKKSKKCQAFISNYGYKKYLNFKGQSQISLNEKKLQEEAQWDGLHGIITNAKHLSPHELLEHYRGLWQVEESFRITKHDLKVRPIFHWTPERVKAHLALSFIAFCCVRHLEYRVALQYEKMSPEAIRQELIRIQSSILKDKNGQRYVIPSKASNHGLKIYQVMGLKYSTTPYKLISSKPKFHKP
1282486..1283109                   PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposition protein; NCS13_1_0988; phage(gi557307613)     2.85e-40            NeochlamydiaspS13MDRRNQSQFAKKLVKSHLQVNKTLETFDFSFNTKIYEPILKELATCHFVENKECVLIIGPSGVGKSHLAQSIGHEAIRKGYEVLFYRTYQLFYWISIGHGDGSYRKRLQQVIKVPLLILDDFGLQSLSEASQMDLYEVICERYEKAATIITSNREFGEWQEIFANPLIGSAALDRLIHRATKLVIEGKSYRMEQFHKRSKQNKETEK
1283319..1283828                   hypothetical protein; NCS13_1_0989                                                   N/A                 NeochlamydiaspS13MKATSEQLDKEREDAEIKLAQAEAKIERGRALQEKGRALSKLADVRVFCTALGLPQPQENDLERINQIASTYFPHGEIGDINGQITLFSMSPIEKFIAETGSTTNKLNFTPIRIVHDPKNLVEFLQKPGCRIKFLGFDARIKDTLEQQLDAVCPKEGRTFKIMYVAPKK
1283979..1284016                   attR                                                                                 N/A                 ACTTTAAGCCTATTTTGATAAGCAATCAATAATACACT
complement(1284759..1285910)       hypothetical protein; NCS13_1_0990                                                   N/A                 NeochlamydiaspS13MNVNPDNRCLKNNLDQLSPKDNSLSISAVQADNRALVQPTHATAMKVFEENFALFNHYHQIAIKVRDDITAIEYSELVKKAENALLHVRHVVANHPDLTKQRSLQEMEAEFDELCIKMPLGASVLLQRDIDKLHKISTIPSNKTYLSGDIEYNEPQVPLFGLIGYFERFKELHGYASISICMKTGEYYGIPINKMATLIGFRNQSSSSSLFPSMLPSRFKTSNEEKIYQQLNELRILINKKISEWGYAGFTIFHTDEVKHNLKGEPSIEEWGCQIVLYHTKQGEENNISYEKCLHLESSSRSQEKKISNFNQITRKKIGVQAQPKDSHSLKNIKKNSRLKVFFKRFIFYPLKTVSKFISLWCRSAYVRIRYLKAKLLCATSTL
complement(1286313..1286522)       PROPHAGE_Shewan_MR-1: ISSod13, transposase; NCS13_1_0991; phage(gi24375047)          4.44e-18            NeochlamydiaspS13MESAKNSIRPSKKEFYAIAFRKKVFKNVEELQEDVDKWMNEYNNERTHTGKYCLGKTPLQTFLDAKPLA
1291800..1291813                   attR                                                                                 N/A                 AAAAATGTTTCTAT

#### region 2 ####
1313843..1314124                   PHAGE_Mannhe_vB_MhS_1152AP2_NC_028956: transposase; NCS13_1_1014; phage(gi971760537)     5.50e-33            NeochlamydiaspS13MYLKACKMMGYSRDSFYRFKELYETGGEVALQDMTRKKPCIKNRVDESIEKGVVDFALQKPAYGQLRVCNELKKQGIFISPGGVRSVWLKIQS
complement(1314028..1314375)       PROPHAGE_Strept_2603V/R: IS1381 transposase protein A; NCS13_1_1015; phage(gi22537126)     7.33e-13            NeochlamydiaspS13MEKYEELKVLSAEQFRRLTGVKRETFERMVEVLVEAQNRRYRRAGRRGGLSIQDKLLMALEYLREYRIYFHFSFQCFQDVVERSQDCIFSQTERTPPGEIKIPCFLSSLHTLNCP
complement(1314450..1315451)       hypothetical protein; NCS13_1_1016                                                   N/A                 NeochlamydiaspS13MMNINSIKLPSFNGSIFFKIKKEEFLDFITWVFFRLSLLWDARQREEYHQFFEIKRLSVAENTPEMTKLFKDKVLALCQKISDESITQHMKRLNHGKLGYQLYFNTVGDNQACIKAHEVFEMLSMKWERGVPFNRDRFSAFWPAHKQAIRIENIFLQALAFEKEILLSKDALEYCRIYDDMSLSFPISCSSFFLNLERTEQNLTKNIEAMPNDPNEIDDFCDFFSQFLTHWSPRFRIGLCQRYLFSQLFRKYPDKKFDLIILLRALEKDEIYHKYSLETILANLKVHLQNFNLPEYWREKLIIEDDEFFIRDPIYIPFEIHEYYSYLKNRFII
complement(1315611..1315928)       PHAGE_Burkho_phiE12_2_NC_009236: gp6, putative addiction module antidote protein; NCS13_1_1017; phage(gi134288715)     5.40e-05            NeochlamydiaspS13MAKNKKYEDWLLEKLKDHDQAVAYLNDALEESLKSDEESQQLFLIAPRNVAEAQYGIGALAKKVQVGRESLYKTFSGIGNPKWHTLVSLCVARGLNLRLIQILRN
1316741..1317241                   PROPHAGE_Strept_2603V/R: IS1381 transposase protein A; NCS13_1_1018; phage(gi22537126)     5.21e-24            NeochlamydiaspS13MEKYEELKVLPAEQFRSLTGVKRETFERMVEVLVEAQNRRYRRAGRRGGLSIQDKLLMALEYLREYRTYFHLGRSYRLSESGCYRACRWVKDTLIKSGEFSLPGKKALLEKDSEYEVVLIDASESPVERPKRRVKEKKDKESQQQAEAFLFRKKEKAYPKKSGGSR
1317277..1317594                   PROPHAGE_Strept_2603V/R: IS1381 transposase protein B; NCS13_1_1019; phage(gi22537127)     7.82e-21            NeochlamydiaspS13MVKSMIIGCLKKIRCAGLITASGYTGIKKLQRNSRLPKKSRKRKPLTQEEKKQNQAISSERVVNENLIGSLKRFKIISDRYRNRRRRLGLRFNLIAMIYSYEIKI
1317775..1318215                   Uncharacterized protein; NCS13_1_1020                                                N/A                 NeochlamydiaspS13MEYYVSMDILEKIKKIEALIASSKSEGEKHAATLAKNRILERHKQELVEKPLEYTIHLRNEWKKKLFVALCNKFQIQTYRYKRQKNTTVMLRADSTFVNNTLWPEFNKYAALLEDLVQDIIDDLINKIHDVKEEEVVIAGELTETP
complement(1318301..1318528)       PHAGE_Stx2_c_1717_NC_011357: transposase; NCS13_1_1021; phage(gi209447153)           9.25e-08            NeochlamydiaspS13MGKAIFYLNIHWEVFTLFLGIPGVLLTNNIAEQMMKKAVLNRKNAYFFCNETGAKIAGILMSVMETCALNQVDSL
