gi|00000000|ref|AP018385.1|  Neisseria gonorrhoeae FC498 DNA, complete genome. 2216138, gc%: 52.41%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
442244..442255                     attL                                                                                 N/A                 TGCCGTCTGAAA
444754..444765                     attL                                                                                 N/A                 AAAAATGCCGTC
451715..452167                     PHAGE_Erwini_vB_EamP_S6_NC_019514: deoxyuridine 5'-triphosphate nucleotidohydrolase; NgFC498_00461; phage(gi422935886)     1.54e-63            NeisseriagonorrhoeaeMNIEVEMKVLDERMADFIPAYATEGSAGLDLRACLNEEVVLQPGGTLLVPTGLAIYLANPAYAAVLLPRSGLGHKHGIVLGNLVGLIDSDYQGELKVSLWNRSSEPFTVKPFERIAQMVVVPVVQARFKRVEEFVGSSRGEGGFGSTGSH
452245..453432                     succinyldiaminopimelate transaminase; NgFC498_00462                                  N/A                 NeisseriagonorrhoeaeMNTLLKQLKPYPFARLREAMQGISAPEGMEAVPLHIGEPKHPTPKVITDALTASLRELEKYPLTAGLPELRQACANWLKRRYDGLTVNPDNEILPVLGSREALFSFVQTVLNPVSDGLKPVIVSPNPFYQIYEGATLLGGGEIHFANCPAPSFNPDWRSISEEVWERTKLVFVCSPNNPSGSVPDLDGWREVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQSGRSRQKLLMFTSLSKRSNVPGLRSGFVAGDAELLKNFLLYRTYHGSAMSIPVQHASIAAWNDEQHVIDNRRMYQEKFERVIPILQQVFDVKLPDASFYIWLKVPNGDDLAFARNLWQKAAIQVLPGRFLARDTEQGNPGEGYVRIALVADVATCVKAAETIVSLYR
453743..454522                     Protein of uncharacterised function DUF328; NgFC498_00463                            N/A                 NeisseriagonorrhoeaeMFFVLSPAKNLNEKDPCPVSEFTQPDLLAESEILMRQLRELAPQQIAELMHVSDKIALLNAERNAAWHTPFTPENAKQAVFMFNGDVYEGMDANTLNTNQIQYLQGHVRLLSGLYGLLRPLDLIQPYRLEMGTSFANLRGKNLYEFWGGIITNLLNDTLAQAGSNTLVNLASQEYFKSVNTKKLRARLITPIFKDEKNGKYKIISFYAKRARGLMVRYAAEHNITDPEMLKNFNYEGYAFNDAASNESEWVFMRSEQIK
454605..454695                     tRNA                                                                                 N/A                 GGAAGCGTGGCAGAGCGGTTTAATGCAACGGTCTTGAAAACCGTCGAGGGTTGATAGCCCTCCGTGAGTTCGAATCTCACCGCTTCCGCCA
454773..454861                     tRNA                                                                                 N/A                 GGAAACGTGGCAGAGAGGCTGAATGCAGCGGACTCGAAATCCGCTGAGGGTGCAAATCCTCCGTGGGTTCGAATCCCGCCGTTTCCGCC
455053..456246                     PROPHAGE_Escher_MG1655: CP4-57 prophage; integrase; NgFC498_00466; phage(gi16130540)     1.50e-58            NeisseriagonorrhoeaeMAKIITPLSANQVKNAKPRDKLYKLSDGGLALWVYPTGGRSWKLSFVQDGRQQTISLGRYPDFSLTDAREWREEVRRKRAHGENVVNKKVRADFAFEKVARDWFVRWSKGRSEKYAGQVMRNFERWVFPAIGNLDIRQVRTADVVGCLRVMEARGIVDTLRKTKNSLKMVFAFAVGSGMMEINPVAQIGSGVFERVKTKNMTALSPSELPRLIDFLEQRNEFAVYAGRVHIHPVTRFCIYWLLLTMTRIREAALMEWSELDGEVWRIPAERKKERRGHDVPLSRAMRWVLDQARGLNVNGRFVFESVNFQGHINKESPRVAMRRSGLDTTAHGLRSLARTYLREVLKVYNDVAEKLLAHSLGTRTQTAYNRSELWEERKDAPERWGNDVLRLADNGK
complement(456602..456871)         phage associated protein; NgFC498_00467                                              N/A                 NeisseriagonorrhoeaeMESSDVQGRMETLAFATAPKKGGIRKSGFGRVILIKSGHIVIHNADGDSFATGYGVIAADIVSPDLKTDFDIFFPPESLLRYKKIGKKK
complement(456929..457069)         hypothetical protein; NgFC498_00468                                                  N/A                 NeisseriagonorrhoeaeMNRDGSGCGNFGGLGKGYAEYERRNCRMPSRKKAETRTNQNQRKED
complement(457066..457749)         PHAGE_Pseudo_JBD18_NC_027986: hypothetical protein; NgFC498_00469; phage(gi100005)     1.38e-24            NeisseriagonorrhoeaeMDKEKVLDKIKKCLALGRSANEHEAAQALRQAQALMEKYKVNAEDIALSKVSEQKADRKMAFKLAGWQWGVANMIADIFGCKSYQRGKTMMFYGIGNRAETSAYAFDVVYRQISADRRKFLKTCRAGKPSHRTYLADRFCGGWIASAWETVKKFEMSDEEKAIMDGYKKKEYPDMAEARTRDAKSSILQGSKMEYEALTRGMESGKQVKLHYAVNGTGFVKQIGGQT
complement(457760..458296)         PHAGE_Mannhe_vB_MhS_587AP2_NC_028743: hypothetical protein; NgFC498_00470; phage(gi970580043)     3.63e-13            NeisseriagonorrhoeaeMQTVATKPTAKQMLAAKRAAKESTRQERAVKRAGTVKNVDRNRLSARSKAQKENIARMLSGAKVSEDEALTCGIMMRLVAAKVRRYCGEHPGVFDGAAGSRQLERYIKPSEFHAVEIQPEACKALLQNYPAAAGNLGRRKQKKPRVRKRISPSRMARPNRKQSERRMGKGAKLKYRTN
complement(458407..458622)         phage associated protein; NgFC498_00471                                              N/A                 NeisseriagonorrhoeaeMSYLEDVKNALRVIDNLCKEALKEPESLEGYIDEIRDKADEADTSLEFLKDVINYGISDLKNVIEVFEDCV
complement(458674..459165)         PHAGE_Pseudo_PMG1_NC_016765: hypothetical protein; NgFC498_00472; phage(gi374531698)     2.27e-19            NeisseriagonorrhoeaeMTALTLYRCAADVQAALDYYFDSETEREDTLEAVIGQFEVKAQSVIAYIKNQEITEKMLEEHIGRMTGKLKAAKARNQSLKDYLARNMQAAGITEIKADDGTFKASFRKSEAVVILDEAQIPAEFMREAVKTEPDKTAIRKAIESGRQVAGAKIEGRKNLQIR
complement(459162..459344)         putative phage associated protein; NgFC498_00473                                     N/A                 NeisseriagonorrhoeaeMANIDLTQWDGKTIGAAANPEQGYINITIGSDDLFINIEQAYAIHAALGEAVAEYEGGAQ
complement(459484..460170)         PHAGE_Pseudo_RIO_1_NC_021300: putative ssDNA binding protein; NgFC498_00474; phage(gi508178031)     1.89e-10            NeisseriagonorrhoeaeMSLILSVKDESNFKPCPAGSHHATCIRIIDLGTQLVEYQNEQKRQHKILVQWEIDPEGDPEMLMPDGRPYLISRRYTASLHSKSQLATDLKSWRGRDFTPEERDNFDLRNILGKPCLLSIAHQESSDGKTTYANISAISNKMKSYTPKHPDNAVFAFDLSDPDWANYGLLNEKLREQIAKSPEYAEAVNGRQPPAPPQKQAQAAEGQTEYPQGNAAPAEDIEDDIPFN
complement(460239..460400)         phage associated protein; NgFC498_00475                                              N/A                 NeisseriagonorrhoeaeMSFHPETAYNGGGETEPYGPSPEEIKYRQSPETAETRRMTEKQAEGHIKSIIR
complement(460397..460675)         phage associated protein; NgFC498_00476                                              N/A                 NeisseriagonorrhoeaeMKTRNIAFKFAVLAAVLAAGYAFGFAKGGGSRTAKGKPAGIAAMRMALAQKQAEVAELSAEIWLEERHLNADEEEAGCRRVHGDAEVPGGKE
complement(460829..461161)         phage associated protein; NgFC498_00477                                              N/A                 NeisseriagonorrhoeaeMKYYGTAAYGSPDWGMERYYAREDMRQALDGWEAENRILHESGLIEIAKKSAREFVRDADGEPYAQEDWETYLTEDASRIGKDTEAAMNYAIDEREWFALAENIGRLANS
complement(461302..461589)         hypothetical protein; NgFC498_00478                                                  N/A                 NeisseriagonorrhoeaeMSYLDQPLKHGYGNGNGSGNGDGYGNGYGKGYGSGYGNGKGDGSGSGYGNGKGDGNGSGNGDGDGNGNGSGNGSGNGDGDGNGNGSGNGSGYGNG
complement(461586..462062)         PHAGE_Iodoba_phiPLPE_NC_011142: hypothetical protein; NgFC498_00479; phage(gi197085698)     1.05e-32            NeisseriagonorrhoeaeMEANKFEVKSLSDLIKVFAGIAADFEAAMGVKRADISTEFDEPQHEPQPPVTVAEQKGINDFAIGKEVIIRTYSAGVWFGVLKQKAGNEVILTKARRMYSWWAKESISLSGVARHGIRQDGSQICGELDSVWLEAIEIIPVTGGAAESIRTALEVAQS
complement(462095..462295)         hypothetical protein; NgFC498_00480                                                  N/A                 NeisseriagonorrhoeaeMNELISRINRFGTRAKDGQSLLLKVGEICRDAAATWTTRKSESINHTAFTFTVKKDGLKEKVMIVL
complement(462493..462906)         hypothetical protein; NgFC498_00481                                                  N/A                 NeisseriagonorrhoeaeMIHLNVHYCDEIIRHAENDKYSLIGIFPDICHIPTPQAILGRLCLSVSFSAEGMDIQTMKTGQIFLEIVRNDDVISALEIPSYDGSDTEENVSFMLHQTISGLPVSDNDRIYVRMTTHNHILSESRPLSFSWLPYHS
complement(462903..463403)         PHAGE_Clostr_PhiS63_NC_017978: gp25; NgFC498_00482; phage(gi388570654)               3.37e-06            NeisseriagonorrhoeaeMKNCTPTNGTWFKMGATLTVAVAACTVSTPTSAIPVTHIKCLRINGQIKCVKPISPNTTPAAEHIEHVRKNPRRKAAMDRAAARIADKIALKAGGETFVSLRMKKGFTQSELATAAGLPQPYLSRIENSKQSLQDKTVQKLANALGVSPLEVRAAFERRYEYMEQA
complement(463381..463818)         hypothetical protein; NgFC498_00483                                                  N/A                 NeisseriagonorrhoeaeMELTVHFNAEQDLDRLFEKDEEAVGYLENVIAMIQADSAIFDGLYKNRYFREYGEPIGPIDLEVKPILSLWGKDIKVLRVRFDSEEAAGYRIIYAPCHEKQPNGTYIRRIDILAVVNKKTDEFDYQAEHPITKRIIKDYEELYSN
complement(463931..464593)         PHAGE_Salmon_ST160_NC_014900: C2; NgFC498_00484; phage(gi318065925)                  8.51e-22            NeisseriagonorrhoeaeMFSGEQLGQAISEAIKRKNVSQKEVADHFGVKQPSVSGWIKNGRIDKKHLDKLIDYFSDVVTPSHFGIETFRVLKSNEQSSIRFPRLNAEATCGAGTINDHYIEVVDYVTVAAAWAREKLGGNLNKIQVITARGDSMEPTIENGDVMFVDTAVEAFDGDGLYLLWYIDGLKAKRLQSTVGGGLMIISDNSSYRTETVRGEDLNAVRIIGRIRGAWRLSQF
464722..464952                     PHAGE_Aggreg_S1249_NC_013597: hypothetical protein; NgFC498_00485; phage(gi100049)     3.86e-10            NeisseriagonorrhoeaeMSIQKAVDYFGNESRLARAIGVKQPTVWAWNKKGTPPPIIRCVQIEKLTGGAVNRKDLRPDDWHLIWPELAGDQPK
465032..465187                     phage associated protein; NgFC498_00486                                              N/A                 NeisseriagonorrhoeaeMKKQDRNRLSKKDRRLIKKAMLKAAAKGCDEVYKIAPGLKDGFELLGKQPD
complement(465164..465352)         phage associated protein; NgFC498_00487                                              N/A                 NeisseriagonorrhoeaeMPSDLSFILAKELIRSGSIRLSGSTAKGQAGELAVFIRTLHQKPEESEPNTDDEYLIGLLSK
465525..465752                     PHAGE_Mannhe_vB_MhS_587AP2_NC_028743: hypothetical protein; NgFC498_00488; phage(gi970580066)     7.65e-05            NeisseriagonorrhoeaeMNQKQTQCKQIVDYIRNKGCITSLEAYQNLKVTQLAARITDLEGRGFVFAKPKYKVGNCKNPVAHYSIAKSGIEP
465749..465886                     Uncharacterised protein; NgFC498_00489                                               N/A                 NeisseriagonorrhoeaeMSREQRIRGARLPVSAYMQAEGAGKAREALDGRVEKVKGVDDEAV
465870..466934                     PHAGE_Haemop_Aaphi23_NC_004827: putative DNA replication protein O; NgFC498_00490; phage(gi31544014)     1.74e-37            NeisseriagonorrhoeaeMMKPSESLRAAGRPIAYYPKLAKPLGGVNAAILFGHFFYWNDKTQYESGIYRTAEEIEIETGLSVQEQRTARAKLRERGVLIETEKRIEHRIYYKLNLDAFDDLMLQHSGGGESTAPKCNINSPELQNQHSGGGESTAPKCNINSPELQNQHSGSEESTAVIRTEDLTEDLAVYTPLPPNAGNGKGGLNADAFVSADAETCGRETGEPTSPKAESDSNGNGGLSGKPKNANVPRRRKTHGVPLQEIADLYNEVLGGRLPSVQVLNDTRKRAIANRWCEMLGTAAPNGKVRFGDKETGLAWFAGFFRKVAMNPFWMGENQTGFAVGFDWIFKAGNFVKILEWHPPKTNQAARGRA
466931..468292                     PHAGE_Marino_P12026_NC_018269: replicative DNA helicase; NgFC498_00491; phage(gi399528354)     1.49e-70            NeisseriagonorrhoeaeMNRIEETEAVQSLASVGAEQNILGGILIEPTAIARCAILTPEKFYQAQHRIIFRALLDMAAANEPIDIITLNDKLEARGEAENAGGLAYLIDLNQNTPSAKNISRYVGIVNDRFVERGLLKASAAIEKIAVSKDGGTVAEKLSKAADELAAAGKDAVKRETKTFGQTVEDLIGGLDKRLDGVRFGLPTGLMKLDGMTGGLPDGNLIVIAARPSMGKTVLAENIARFALKQGKAVHFQSYEMSAVELARRGMAAECNIPMQNLKTGNLTQSDYANMPIYVSQAKEWKFDVNCDLLNVDELCFLAKEKKLTTGLDLLVVDHLHIMPRAGRDEVAELGNISRRLKNLAAELNIPVVLVAQLNRGNTKQADKRPNMADIRGSGAIEQDANIIIMPHRESYYDGNENPSIAELIIAKNRDGETGTVVCGWKGQFMKFEEEPDLAWQAPKHDEYDPYSV
468309..468539                     putative phage associated protein; NgFC498_00492                                     N/A                 NeisseriagonorrhoeaeMRETCFYCNHADFKTNTGTPVRGFAKCAKARNAEEKATYYPRTNPCAAGAFQTASGAAVAKRTAVLGEYPPAMRRI
468631..469125                     PHAGE_Mycoba_Gengar_NC_031035: hypothetical protein; NgFC498_00493; phage(gi100045)     2.41e-08            NeisseriagonorrhoeaeMTVRNTQTETVRTEAAPQQGGNTNPGYYKNRAFECVGFAQYLNFNLGNAFKYIWRHKEKGGREDLEKALRYLERQRADAPKFKKLKCRRYEKMYAGLKDCGFDGGTEAALLAVISAAYYIRDGEDNFAWAAACVEDLLEKMPPEAGRAPHPESPMPPETAGGGI
469302..469451                     phage associated protein; NgFC498_00494                                              N/A                 NeisseriagonorrhoeaeMDTLLSIITALSFAGAATLAVWLLVEAADAVLRRKRDGKGEDDFDGFGY
469480..469761                     putative phage associated protein; NgFC498_00495                                     N/A                 NeisseriagonorrhoeaeMAEEMRTCKACGGTKPLEKGFNAVPRKEGGVYYYKSCKTCRNKAVRQKRAEKRAAAGAGAMTAARLHGYIRAAHAACPILGAGLWTQPAGECA
469752..470132                     PHAGE_Entero_cdtI_NC_009514: holliday junction resolvase; NgFC498_00496; phage(gi148609431)     5.01e-08            NeisseriagonorrhoeaeMRVIRLILPYPVSANRYWRIWRNRAVRSAEAAAYKETVRRIAQGAGAMPSEGFVAVRLRLIPKANKDGGANKTVIDLDNALKVALDALQGVAYHNDRQVRRIAADYADEPVAGGGLAVEVGELDEK
470399..470806                     phage associated protein; NgFC498_00497                                              N/A                 NeisseriagonorrhoeaeMNQQEFEFMNDLARAFERRYRDTRSLNRCLSIEGRYMGEEACPHKPEIGLRYGEDAMFLTLQAWAKVDAPQQEAVRISFGIGAKSQAAYEERLQAEIRRRGEQLLHLQTDLGLAAWYRAIRQAAGDDFDLLFEKV
470897..472057                     Uncharacterized conserved protein; NgFC498_00498                                     N/A                 NeisseriagonorrhoeaeMNAAAVSAVFKERIASHAEHVKKVAHICTTEETTKQALILPLLDILGFSAFDPNKVRAEYQADFPGAKSGERVDYALFCNGAPVMFIEAKSYTENLSNHCPQLSRYFNATPEIAICAITNGREWRFFTDLSNKNIMDSEPFLTVDVTMLNENDMAQLYQFRHDKFQPDALRSLAEESIYLTAFTESITESLKEVDLDFVRYVAGRANIQRQFTQRYLESIRHIVKQAVQNTVSSMVVSGLSAPKVQEEAAPVEKEQEDPTAPIIDPENNKIVTTYSERRLFDLVKSILPDDASIEAKDTESYFGVLVDGKSNRWILRYFDNKQRPSVIFPIELEESDISNIERCGLEVSGNQVIIDTPENLLRVVWLVIDSYRFCCDDENFKRKPK
472338..473207                     PHAGE_Haemop_Aaphi23_NC_004827: putative antirepressor protein Ant; NgFC498_00499; phage(gi31544021)     7.36e-58            NeisseriagonorrhoeaeMNVIQSFNFNTTSPVRAFEKDGLTWFVAADVCKALEIQNPTQALEKLDDDERSMFNIGRSEIHGGGGNVNIINESGLYILILRSRKAMEQGSTAWKFRKWVTSEVLPTIRKTGGYQVGQKTTADDRTGLRRAVAALVGRKGIDYSSAYSMVHQRFNVESVEDIPAGKLPEAVAYVHALTLHTGLTGEVLDREPLPAPQPALPISGNALYDLAVAVSYGARAIQMGRDVSLPLKQLGCRQAVTMWTVWAETRSRLKAAANALEALSAHADAEHAEKIRPILPEIRNLSAV
473500..473949                     PHAGE_Entero_Sf101_NC_027398: terminase small subunit; NgFC498_00500; phage(gi849122263)     2.18e-31            NeisseriagonorrhoeaeMSGTKRKLGRPTDYTKDMADKICEKIANGRSLRSICAEDGVPPMKTIYRWLEANEEFRHQYARAREKQADYFAEEIIEIADSAQAESAAVSKAKLQIDARKWAASKIAPKKYGDKTELDVKSGDGSMRAAVRLDAEEYRKIAEDVLRRV
474011..475432                     PHAGE_Acinet_Bphi_B1251_NC_019541: hypothetical protein; NgFC498_00501; phage(gi423262000)     0.0                 NeisseriagonorrhoeaeMALGQFDDVETSVIRSLSSASLYMFTRRMFYQRRGYVWQRANHHAPICNALERVFNGETKRLIINIPPRYSKTEIAVVNFIAWAMGRVPDCEFIHASYSAALAVNNSVQIRNLVQHEEYRAIFPDLALAGESGHHWKTTAGGVMYATGAGGTITGFGAGRHREGFGGCIIIDDPHKADEARSEVRRQNVIDWFQNTVESRKNSPDTPIILIMQRLHEKDLAGWLLDGGNGEEWEHLCLPAIQEDGTALWPEKHDIETLRRMEQAAPYVFAGQYLQKPAPPDGGTFKPDNLQFVKALPAGNIRWVRAWDLASTANGGDYTAGGRLGVTEDGRYIIANVVRGRYGADERDRILRNTAQKDGVKTKISIPQDPGQAGKSQTLYLTRQLAGFSVSAGPESGDKVTRAGPFAAQVNIGNVMVLDDGTWDTDALIAEMRMFPNGRHDDQIDCLGRAFGELLDTRTGMIDFLRSQVEAVK
475429..477576                     PHAGE_Bacill_Riggi_NC_022765: minor head protein; NgFC498_00502; phage(gi568190979)     3.41e-11            NeisseriagonorrhoeaeMSKKTPLSQGFIARVAAGVRYAFTGNADGWFDAGEPPAPAAQQAEGRRFDYEPFYNVGHSKPREREAVGFAQLRALADNYDVLRLVIEARKDQMECLKWTIQKRDVESTEDDESQRKDRKVDEAVAFFRSPDKEHTWADWLRILLEDLFVIDAPCIYPRKTLGGGLYALEVMDGATIKRVLDNTGRMPLPPDTAYQQILHGMAAVDYTADELIYRSRNNRSYKVYGYSPVEQIIMTVNIALKRQVHALEYYTAGSVPDALVGVPETWSADDIRRFQEYWDLLLSGETAQRRKMRFVPGELSRNFRETKQPPLKDVYDEWLARVVCFAFSVEPTPFVAQVNRSVAETSREQSLSDGMGSLKNWVKALIDDVLARYMDMAAYEFVWKGEESLNPKEQAEIYAIYKNAGILTADEIRAELGKEPLPGQGQPEPDKQDGRKPEEPPNQGAEKLGKSESPMSEDESAALIEAYLLTRIDGLAEQIAALIEGAAVDWQAGDLAAELSRAAGVVANGLDFGDWSGLSDVVEPIIRRVAEDGAVAALLRVMPEPAAGMVTNIRSRAVKWAHERAAEMVGMKRAGGGLVRNPAAEWQITEGTREMIRAQVAEAMRNGDSVQELAGRLKESHAFGNARARTIARTETAMADGMGNLIGWEGTGLVAGKQWITAKDDKVSDVCNANGGMGVIGLHEPFSHGALTIPGHPNCRCAVVPVLAGDMPES
477644..478801                     PHAGE_Strept_Jay2Jay_NC_029098: capsid maturation protease; NgFC498_00503; phage(gi985760259)     7.30e-08            NeisseriagonorrhoeaeMTKLYAQIAKTEAQDDGTVKVWGYASSEAVDSDGEVVAAEAMKAAIPDYMKFGAVREMHGSNAAGTAIEINVEDDGRTFFGAHIVDPVAVTKVKTGVYKGFSIGGRVTARDDLNKSQITGLKLTEISLVDRPANPDAVFTCFKADKPKDEAGAADKDGKPSDKPTEEEDENPKDGDKGPKTEDKGDKDAGKKDEAGKSASVNLSESEIAALKAVLAKADKPKGGTAAKSMYQVKSPADVLMSLKWLVEDASYDNIDEAVTAQIKESAAGLAESLKALAASEADKPADGLAAKAGKSGDLAKAESADELAKAQDALKKSNDALAKAQAEIESLKKQAVPPKGSTKAISKAEDNGEDPLKGFQPIVKNDGTLDDVATLIKAKQTGRL
478842..480341                     PHAGE_Thermo_THSA_485A_NC_018264: hypothetical protein; NgFC498_00504; phage(gi397912636)     2.98e-32            NeisseriagonorrhoeaeMNVNQLTQETIELMKSAQAGGGPPDKGFTQPAGFTAGLQTYDLSAPSQKLYPVLTPLRNRIPRVGGGRTIGSNWKAVTNINVGNQRAGIGEGRRGGVINHETVERNAQFRAIGLENQVTFEADYAARGFEDVKALAVAQTLQATMVAEEMILLGGNTSLKAGVTPTPTAVVSADAAGKISVSTLSVICVALGLQAYWDVAGANNGATGQSPNIKTAQVPAKITRRNADGTTDTFGGGSARKSAAASVSGIEAGKKVTAVIPAVRGAVAYAWYWGAAGSEKLGAVTTAAKVEISADAEGTQTAASLPSEDNSTSILEFDGLLTQIALPDSGAFWSDNKGGGLTSDNAGGVYEFEEAFAHFFTRYRLSPDTVYVNARDLAALTKLIIGNSGAPLIKLNVDVNNTANIRAGVVVGSYMNKITGDDLNIVVHPNLPAGTYLFYSSRLPAYVQGVGNLLQVRTRQEYYQIEWPLRTRMYEYGVYADEVLQGMFMPAFGMITNVG
480393..480704                     putative phage associated protein; NgFC498_00505                                     N/A                 NeisseriagonorrhoeaeMTVKLKAPEGFTDVSFGSQSYAADENGIVEVPSEAAEFLYQFGFGNVASEPAEGPEKAKRGRKPKTGQPAGQSEPAEAAEPAEAEAAEPAEAEAEPAEAEKAE
480707..481237                     PHAGE_Strept_phiSASD1_NC_014229: gp29; NgFC498_00506; phage(gi298103494)             5.78e-07            NeisseriagonorrhoeaeMAAPVSLEEFKQRIGVEHDRRDDFFLSVIDGVSAAAEAYIGRSLLAADYVGRYDGNGKDRIVLDNYPVLSVSSVKINGADAGGWEFDNWLLMRPEGFARGLKNVEVSYRAGYERMPADIREAVMIIAVQRVNEIEGKGVRSKTLAGETVAFSTFGNSGGMPPSAFAILNEYKRKGV
481237..481719                     PHAGE_Vibrio_12B12_NC_021070: phage virion morphogenesis protein; NgFC498_00507; phage(gi481019160)     3.58e-07            NeisseriagonorrhoeaeMLKMEFIGGGILAAVFKAYAADVQDAVVKSVGRSALRLQSEVVLNRLSGRVLRVRTGNLRRSVHQRVNVSGNVVSGEVDTNVRYGIAHEYGFAGSVNVKASLRQVRQAFGKPLKPPRYVRVRAHTRDVKLPERSFLRSALRDLTPKFADDLQKSIGKVLK
481716..482144                     phage associated protein; NgFC498_00508                                              N/A                 NeisseriagonorrhoeaeMNREAVYSALWAKLDALDGFVTKSRKLVHWNDVKRYDQPALFMAQGDMQALTLTGRETKWILRADVYLYVQTAGQPPAPVMNPLIDAVCNAVNAVHPVTGKTDLTADGADIEYCRVEGTVETDEGTLGEQAVCIIPIVICAA
482170..482943                     phage associated protein; NgFC498_00509                                              N/A                 NeisseriagonorrhoeaeMQLTFGSGEVFAQMITDAYGNRVQNATPVRIMGLQEMSVDLSAELKEFYGQNRYPLAVAQGKVKVSGKMKGALINGLTLNTLFFGTEYATGTMKALWAETTGKVLDGDNYSYLQAAAPGGGKFAEDAGVMGQDGTAYIKVASSPKQGQYTVSDAGVYAFNSSDKGKTVYPSFTYTQTMPPAKKIELTNMATGNTPTFKMRYLTQFKGKKALLELESVTSGKLGLFSTKNDDFSVPEIDFTASTDEAGFKIGTLWIQE
483004..483333                     phage associated protein; NgFC498_00510                                              N/A                 NeisseriagonorrhoeaeMTVRIKGVTVELNGADYVIPPIALGALEQLQERIGSFDGNAADAGQISTVIDCAHAALKRNYPDLTREEAADLIDIGNMNEVFAAVMDVSGLKRREQEAAQAGEARAAD
483345..483611                     phage associated protein; NgFC498_00511                                              N/A                 NeisseriagonorrhoeaeMIAHVCASTGWTWDYVADNLDLPRIKHLNEYWREHPPVHILAASYMGVKPSSGSVQSEADEAEAVGMLGGGELSEDEFDALLKAKGII
483611..484210                     PHAGE_Caulob_rogue_NC_019408: hypothetical protein; NgFC498_00512; phage(gi414088956)     6.40e-05            NeisseriagonorrhoeaeMGNAVFPEFPGLKWGRKKTAVWSTGTQKSASGREFRTAYYTYPQWRFSLSFEVLRTKASVNELEKLAGFFNARKGSFESFLYEDPADNAVTDQPVGNTVQGVARYQLVRSMGGFIEPVSAVKERPAVKVGGTALAYGRDYTVTDKGVLVFNTPQPPGRPITWTGGFYFRVRFTSDTVDFENVLGSLWAAKKIEFTSVKL
484207..485061                     PHAGE_Caulob_magneto_NC_019407: putative tail protein; NgFC498_00513; phage(gi414088603)     5.84e-20            NeisseriagonorrhoeaeMKAATKELIDLLHGGDEFQMADLYTITLSGGRVLRHTGADMPVVWDGQAYGAHELVIKRGATRTAVGLEVDSNTLQISAAPDYRLEGLQWAEAALGGVLDGARVRIDRVFFDAGLRPVGAVNIFSGRVSDVSGGRSSVKVDVKSDIELLNVSSPRNIYQAGCMRTLYDDGCKVNREKFTVNGRVTENSRTGTVLKHNLTQPDGWFSQGVIKFAGGRNAGLSRTVKAHGGNTFELALRLPYPPQAGDAFKVYPGCDKRRDTCKDKFDNIVHFRGFPFIPSADTVV
485063..485494                     PHAGE_Roseob_1_NC_015466: phage cell wall peptidase; NgFC498_00514; phage(gi331028137)     1.85e-13            NeisseriagonorrhoeaeMPSETDLRARIVEEARSWLGTPYHHHAMVKGAGVDCAMLLVAVYGAVGLLPEGFDPRPYPQDWHLHRDCERYLGFVTQFCRETESPQAGDIAVWRFGRSFSHGGILAGGGKVIHSYIGRGVVSDDIGQAELIGRGVRFFTFSF
complement(485522..485968)         PHAGE_Pseudo_phiKZ_NC_004629: ORF114; NgFC498_00515; phage(gi29135050)               4.55e-17            NeisseriagonorrhoeaeMKPLNFSGGSLDCLRQFPENAKQAAGYQLQEKPENRGRRFGIGGKTLQQIDSGKEIMESQTFASVFDALCDTPAEAANMRLRAGLMMHIADTVRENGWTQKQAAEHCGLTRPRINDLLNGKIDKFSLDALVNINAGLGQCISLSFAPA
486040..490185                     PHAGE_Pseudo_vB_PaeS_SCH_Ab26_NC_024381: central tail hub; NgFC498_00516; phage(gi658311483)     4.29e-11            NeisseriagonorrhoeaeMGGKSSTVTSAEERILSLQVQRSSQGLTLPVIYGRTRVAGNLIWYGDFVTIEHKTTTRRGGKGGGGVKQVGISYTYEAAVMLALCEGEIQGVGRVWRDKEKFDSPAQLRLTLMRGGDEQPLWTHLQQAKHQGQALNYSGTAYLCSPNYELTKSAQIYQHNFEVIGKSGYSGNIPDANPREIVLDLLTNQRYGCGFPSQNIGDTDRYSNYCRAVGIFLSPAYTEQGEAQRNISELLEQTNSAAVFSQGRLKIIPYGDGSHSGNGAVYVADNKAAYDLTDDDFIVSGAQDPVKAGRKTNADAFNQIQVEYLDRDNDYNVAIAEAKDQANIEQYGLRPKDAVRMHGICDAKVAQKVAQQLLQRALYVRNEYEFKLGWKYCLLEPMDIVTLTDAGLGLNKTPVRITEIEEDGEGVLSVKAEDCPAGVYTVSEYPTQPSSGYSADYNVSPGNAHVPVIFEAPLQLTGGEPQIWLATAGGGMWGGAEVWVSADGDSYTRVGAVNRKARFGALTADLPDGAVFDRTNTLGVEISAGQLTGGTEQDSRDLLTLCYVDGEFLAYADAELKGVGRYTLGNLTRGAYGSAVNAHAAGSRFARIDEALFKYAVPRNWIGRTVWVKLVSYNVFGGGIQDLAEVPAYSYTIEGAPLGQIQNLRLTSSWAYGKEAVIAWDKLDGADTYDVEIYAGGSRRRLRAVDGIVDNSYTYTQADMKADGGQVRGIVFKVRGRAVTGKTGNWAQIAAQNPQLQALQGISIDSGLRQAFFTCQKPDEEDFAGIIVWVCENAACPAADANKAYDGAETFITIAKCGGKPLEKGKTYYLRAAGYDSFGKDNLKISGSISFTVYDVSATDLSESSLNKALRDKINLIDGNGAGSVNERVEAVRSTADGNAAAVQTHARSINGLEAQYTVKVDANGKVAGFGLATTPKNGTPESKFIVNADRFGIGAAGKADVFPFVVDTQKNRVGINGELVVNGKAVVDKLNAGDIHGGKIAADTLDANRLKAGSVTAREIGAAAVTADKIGANAVTADKIQVADLSAVSSNLGSITGGSLNIGGGNFTVSSDGILTADNAVIRGRIEADSGYFNGTVRASSVEGDVLRAHRLRWTEGNVWVLDLDKDPLPRVLIPNFYVVSETFGNNRVQAKLLLNGGVLAPREVRETENYTNYIWRGRTFGRYEDLPPRARGVGDYTEQSGSRYRTRLEYQIQVIPAGKPVSLKLSLASHESVFSPFVSVSYLAQSDYEYKQLLGRMVWRTFAESFRYDSKKQVYLGGDRRVHDYQNQMYKHWNAYGGLLQLPDDIYGISFEYRPFTNADWSTMLAFDRSDKFVVVKKYRGHAPQQYSLFQEEFNTAVPKSNLLFFVEHWWQYIELRNIRVLIPESRENEVWQVG
490297..490602                     phage associated protein; NgFC498_00517                                              N/A                 NeisseriagonorrhoeaeMIEDKKIVALNFAVEDGMTGASAAYHVVEHIGADYRNGYVTATLNGYVSENAFKSGKRYLLARTLDFQETDITAPDPGWVYRKALEGAAGIPKDAQPVYAE
490673..491143                     putative phage associated protein; NgFC498_00518                                     N/A                 NeisseriagonorrhoeaeMLRVLLNRRFLPAGFQAWLFGTATRVLEAVSGLGLSGYAAVFALAPDEIYAWRIYYKFQDIPEAWTVGVLAAAGLLQTALLFARGVRACVASAYLLLFSGFVWFLVSVAFWGAYPPLNTGMVVPPLLAFFCALAGNNALRFLFSAQKSRGLADEGS
491144..491476                     phage associated protein; NgFC498_00519                                              N/A                 NeisseriagonorrhoeaeMGFLQFGLLFAAAGGVLGAVWASLQERGRPVQAVLEAFISAIAAAAAAERFVPLDQAWTCAAAGVFAGMMTGHALDTVRALAPKVLRGYLGGLAEKLTGVKDGGSSDGKD
491671..491790                     Uncharacterised protein; NgFC498_00520                                               N/A                 NeisseriagonorrhoeaeMLLLLEKYRSVRLFLRAVLCAAPLTALIWKPADILNALK
complement(491845..492192)         PHAGE_Strept_EJ_1_NC_005294: transcriptional regulator; NgFC498_00521; phage(gi39653708)     1.81e-11            NeisseriagonorrhoeaeMYIPERGDIFHLAFDPAAGTEMKGGHYAIALSPRAYNRATGLVYACPISQGRAAAARSGGMISTLLGAGTATQGNVHCHRMKALDWKIRRAAFRETVPDYVIEDVLARIGAVLFD
complement(492192..492428)         pemI-like protein; NgFC498_00522                                                     N/A                 NeisseriagonorrhoeaeMLRLQKWGNSAAVRLPARLLTALNAKIGDALETEIRNGELLIRPVKRYRLSDLLAETEAAPPRAEGWEEMPDVGQEGV
492635..493174                     PHAGE_Pseudo_vB_PaeS_SCH_Ab26_NC_024381: endolysin; NgFC498_00523; phage(gi658311460)     1.58e-63            NeisseriagonorrhoeaeMKELKWIEEARKYLGAHEKVNGKSNPVLLAMLQEMGNFNQEQKAWWKETDTPWCGLFVGHCLGKAGRAVIRDWYRAKAWSMSGLTKLEAPAYGCIAVKPRRGGGHVFFVVGKDAEGRILGLGGNQGNMVSIIPFDPADIDGYFWPSKLIGGKAVPSSPAEGRYRLTAAAATGAQGAGEA
493174..493332                     putative phage associated protein; NgFC498_00524                                     N/A                 NeisseriagonorrhoeaeMMNPTEFLKARIAEWEAKSKEAGGNADFKAFEFAESEIKNYKAMLKTYERPD
493316..493657                     PHAGE_Entero_vB_KleM_RaK2_NC_019526: hypothetical protein; NgFC498_00525; phage(gi422936900)     2.82e-06            NeisseriagonorrhoeaeMNGLIKNPKLIAVSVCAVFVAGAWQYDRAAQYRRGYGAAMLEVSERLKAAAVEHAEHARKSSAAYQAQKAAREEKERVRYVQTLKIIEKPVYRNACFDADGVRELNAAVDDGG
493596..493814                     PHAGE_Nitrin_1M3_16_NC_024217: hypothetical protein; NgFC498_00526; phage(gi643655216)     2.81e-06            NeisseriagonorrhoeaeMPVLMLTACANSTPPLTTAVKPPADLVRPCPKLPHLEGNTGADVLPWALKAAGMYNDCRARHGALVRALGAD
494155..494304                     phage associated protein; NgFC498_00527                                              N/A                 NeisseriagonorrhoeaeMNAEGFCEKQTACRPDGRRNAGDRADLKAFEFAGRELANYREMLKRYAV
494334..497378                     PHAGE_Pseudo_vB_PaeS_SCH_Ab26_NC_024381: tape measure protein; NgFC498_00528; phage(gi658311478)     2.93e-49            NeisseriagonorrhoeaeMSDLEAKVRITVENHTKQGFDSAAADADKAAEKMRSSGDNAAKGFKAAIDSMHETMRNLHADVKAGFEAAGNQAQQASEKVRAEVGKIGSGLSGLTKLLAGLATADFAKSVLDTADAMQSINSQVRQVTSSETEYLAVQQQLLDTANRTCASLESTANLYVSTSRALKDYGYTQQEILKFTEATNNAMTIGGVGARQQAAALFQLSQALGSGVLQGDEFKSISESAPILLDTIAEYMGKSRAEIKKLGSEGKLTADVIFKAISGASEKFGEQAAKMPVTMGQALTVFSNNWQSMVSKLLNDSGTMSGIAAVIKLIADNLNLVVPIVAGFAVAVAAAVAPTLALNLALLANPFGIIAVAIGTVVGLIAKFGDEIDVFGGGWSNLSDVIRAVWQIITETVGEAVGTVKSWFDGLTGRLNEGAGGWPSLFGRVMSVISSAIGAYVNVYINIFATGWMLIKEAANDMPQFFANLGKAIGNVFISAIERMINKAVGMINSMIDFANKAASMAGISGIGKLNKVRMGRMDDGGLGERIHDSLTKDRAGAMANAVRERAADIHEADALKGRGGGGHAKTARKKPGANQGGGKGGKSRSGGPGAAKDPMQAWEGEIKARKLAHREMQRETLAHQEWDLAREAEYWRAKLATVDANGKTGVKIREKILTLEDQLSKQSTEAKMNQAAEWEKLDKHKLEMEKDAADQALADGRISQLERLDLEIEFENRRYQIAYDALQERIALAEQDPAYSQAAIGKLKAQMGELGRGHERTQAKNEGKRENQRRKDAPNVMEMLQDGGRNVWQEAQQQMGQAFTAMLARAQNFRQAMNGFFKSMGQTFIQEMVTKPLTGLMRRMVEESAIYKMIFGTKETLETAAAAKTAATKATETTAVVSSNAVQAASGAAASQAHIPYVGPILAVAAMAAMMSAVMGLMGGGGSQTTTTTTRIPSAAGGWDIPAGINPLTQLHENEMVLPAEHAQTIREMADQQGGGSTVIINSTGGDFIHKNDLAKLLKQMKRDFKFV
complement(497438..497917)         phage associated protein; NgFC498_00529                                              N/A                 NeisseriagonorrhoeaeMTDNLIQIATPILTVIGVFVAAYGIMRNTENAKKRATIDMIMAERNNAALQEAITIVNGLAKTDGCILATYTSDTPDKKKDREAILTVLNQREFVCAGVLGGALHEKMYKDFEYSMLLRDWDNLSSFIFEIRRIRSAPTAFQEFEAVARKWKKKPLKTK
498123..498134                     attR                                                                                 N/A                 AAAAATGCCGTC
complement(498259..499248)         PHAGE_Mannhe_phiMHaA1_NC_008201: integrase; NgFC498_00530; phage(gi109289985)        2.46e-101           NeisseriagonorrhoeaeMATITQRNGKWRVQIRMKGVSRSATFERASDAKAWAARIESQIMDGIQGNAPRNTIFADLIRRYLSEVTPSKRGAREESYRIGRALKTPLAKVRLADLRPQDFADWRDQRLQEVSPTSVGRELTTLSAVCEHAMKEWGLLRENPVRKISKPKKSRARTRRPTEQEIADICAALLYRPNEKPKMAVQRVAVAVLFAIETAMRAGEICGLKWADVNMRRRIAHLPITKNGDSRDVPLSLRAAELIEQLRGIDDTWVFSLDAKSLDVLFRRARDNCGIQGLHFHDTRREALTRLSKKVPVEVLAKISGHRDLRILLNVYYRPDMADIAKMLD
499937..500971                     PHAGE_Prochl_P_SSM2_NC_006883: phosphoribosylaminoimidazole synthetase; NgFC498_00531; phage(gi61806048)     5.65e-82            NeisseriagonorrhoeaeMSTSLSYRDAGVGIDAGDQLVEKIKPFAKRTMRPEVLGDLGGFGALVEIGKKYQNPVLVSGTDGVGTKLKLAFDWDKHDTVGIDLVAMSVNDILVQGAEPLFFLDYFACGKLDVPRATDVIKGIAQGCEESGCALIGGETAEMPGMYPVGEYDLAGFAVGVVEKENVITGRGIGAGDVVLGLASNGAHSNGYSLIRKIIERDNPDLDAEFDNGKTLREAVIAPTRLYVKPILAALEKFTIKGMAHITGGGITENVPRVLPKNTVAQIDAESWELPKLFQWLQKAGNVETQEMYRTFNCGIGMVVIVAAEDADAVRSFLSGQGETVYRLGCIRERQGNEHQTQVA
506477..506488                     attR                                                                                 N/A                 TGCCGTCTGAAA

#### region 2 ####
722094..722105                     attL                                                                                 N/A                 TCAGACGGCATT
722274..723287                     putative phage associated protein; NgFC498_00730                                     N/A                 NeisseriagonorrhoeaeMKKNLPALALASMLILSGCDRLGIGNPFSGKEISCGSEETKEILVKLVRDNVEGETVKTFDDDAFKDQAFADIGISHIRRMVERLGITVDEVRTTEKTDTSSKLKCEAALKLDVPDDVVDYAVAANQSIGNSYKKTPDFFEPYYRKEGAYYVKTISYSVQPTDDKSKIFAELSQAHDIIHPLSELVSMALIKEPLDKAKQRNEKLEAAEATAQEAREAEEAAAQEALGREQEAARVSEWEERYKLSRSEFEQFWKGLPQTVQNKLQASQKTWKSGMDKICANNAKAEGETPNGIKVSELACKTAETEARLEELHNRKKALIDEMVREEDKKELPKRL
723332..723472                     phage associated protein; NgFC498_00731                                              N/A                 NeisseriagonorrhoeaeMPQYRNWQNGLGAKCADGDEYGVAQSDCRTREINAKTKEIQGYLID
723577..723771                     putative phage associated protein; NgFC498_00732                                     N/A                 NeisseriagonorrhoeaeMIYYPAVLFQNPDQSNWGVIIPDLPGCILSAIRLPTRLPMPKPPQCSISKGFCRKTCRFPRRKA
723711..723959                     PHAGE_Haemop_HP2_NC_003315: hypothetical protein; NgFC498_00733; phage(gi17981828)     6.09e-07            NeisseriagonorrhoeaeMFHLEGLLQENLPIPEAQSIEVNRDNPDYADAVLWTMVEADDAALTGQVRFNVSWPQHILNRVDACTAARHETRAVFWRKPP
complement(724419..725669)         PHAGE_Haemop_HP2_NC_003315: tail fibers; NgFC498_00734; phage(gi17981847)            5.83e-68            NeisseriagonorrhoeaeMEKTQFGRHPRRRDRVLSQSRPKPRRLSQSRRHDLCTKHLLDLYRALGNTNKLPDLTRTDIGITAWFPSDQIQTGWLAFDDIRERVTESAYPELYRLLTEKYGRIQNVPQAEDRFIRNAGNGLAVGTKQEDEIKRHVHKVFSHWANHPDAAAVGYEDRNERQRSALVSTWTDGDLNDNGFLTPRLDSKMATGGAENRPKALVLKLCIKAADTLGEAVFRIKSHGETANAGALDASRLAQGLQEKADRDHTHTTAQIQGLDEKISAAVAAQFTRQTIGGVDIVRFPDGTMIQTGSYRFARGGSPIGNEVVFPIAFADGNVKCFVSERHSGRVNGERQHNWLFIRAKNHAAAIITNWYESSCDWMAIGKSASGNAASPTPIVPEIPEIDEEPQRESGRSSTGLRNPRRHRGLDFPVGS
complement(726101..726670)         PHAGE_Haemop_HP2_NC_003315: tail fibers; NgFC498_00735; phage(gi17981847)            9.67e-18            NeisseriagonorrhoeaeMANATEQNQFDQAVRLIEPGDSVVVGPGAPVNQPLQALANRTLLLKNQTEALQTASDTKAAASTAVNAGDGLTGGGSLAQSRTIALGAPGQITATSQNTVPKNGHTHAIDTARTDRAGIVRLDNAISEAEDTAATPKAVKTALDQARAAAATADLKVSLSDNQTVTGQKTFTAETQFQSGIRLSANPTH
complement(727089..728144)         PHAGE_Escher_vB_EcoM_ECO1230_10_NC_027995: putative phage tail protein; NgFC498_00736; phage(gi937533298)     2.33e-48            NeisseriagonorrhoeaeMGNSRLSQLPAPAAIEETDFEGIFARKKAALTALCPESIRETVAQTLELESEPLTIDLQQQAYQELLVRNRINEAVKANLLAYAQGSDLDHIAAQYGLSRKTIRAADPDANPPVAAEYETDDAFRARVQAHPEKYAAGPRTAYEAHAIDAHPQITHARAVRRAIGTVEVYIKTQSGTPDETILTAAREYLPAETRRPLCDNVQVTAAQPKDAAVEYSAEYHPAANIQAERQTACEALDNLWRQNAHIGASVALSKIIGALDTPGVKKNHTAQPRRRHRMRQRRIHPNHVHARARINEQHRPREQQPPATRTGKADRTRNCRRLPPTRPRIFTLSRLRKKHRHGRGLGLCRN
complement(728165..728491)         PHAGE_Pseudo_phiCTX_NC_003278: baseplate wedge subunit; NgFC498_00737; phage(gi17313236)     2.18e-21            NeisseriagonorrhoeaeMTDAENGRGQDTLAHIAQSIRNILFTRIGTRLMREEYGSFIPDLIDMPAGHAAIALIHQAAVTALARWKPRITVRRIQADTADLAAGKIKLTLDVTLADGGERTYRIK
complement(728488..728682)         PHAGE_Escher_pro483_NC_028943: baseplate assembly protein V; NgFC498_00738; phage(gi971758527)     3.92e-05            NeisseriagonorrhoeaeMELKAVTSLTIDTPQTTITGHLTVNQTTTAQGLLTYQNGMNGQGGSLSEHTHPDDSGGTTEKPQ
complement(728782..728988)         Uncharacterised protein; NgFC498_00739                                               N/A                 NeisseriagonorrhoeaeMTDRQIDNLIKPATIADTDPASAHNTAALPPTGCPISSPLQAACQYGASQVSAKPAPSYPLPANPRTA
complement(729173..729412)         PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766: hypothetical protein; NgFC498_00740; phage(gi971741518)     6.44e-13            NeisseriagonorrhoeaeMRNKINRNDMELGYTPYNLRTLRNRCKLTQAELAQIVGVKHYIQVGRWEAEPDTETRRADMPLEKWRQFLDWIEKTNAV
complement(729517..730092)         PROPHAGE_Neisse_MC58: IS1016C2 transposase; NgFC498_00741; phage(gi15677271)         2.97e-31            NeisseriagonorrhoeaeMKITHCKLKKEVQKEPLRSFVPEVTARSAADILGIHPDSAALFYRKIRTVANHRLALAADEVFGAPPGRAEAVSAYGVKADAVAARQEKRLSSAFRNATGGPIPLPRTMPSLKRCPLPSKRKSCRTVLFMPIARAAAASRTRAVLSVAASTVPRNLQTVGTTLTALGTFGIRQNAPCGNTTESTANLSRRS
complement(730114..730398)         phage associated protein; NgFC498_00742                                              N/A                 NeisseriagonorrhoeaeMNRAALFNRYPEWIIGQDGASRFITHCRYPRLIAKIHRQTDGECPGGHYRHSENGITLYDFIFFGGKPADEARFAAVLTETCRRAVKKIGSVPD
complement(730435..730698)         phage associated protein; NgFC498_00743                                              N/A                 NeisseriagonorrhoeaeMADILPSDKRRQPPKTKGNPINIIEQETKRTELRKIDAEIAKIIADAHKINAESVKIAQESRWYPMMAATGLVTAIAAVLALIFKFA
complement(730718..730966)         phage integrase; NgFC498_00744                                                       N/A                 NeisseriagonorrhoeaeMHGFRDLFTNISLTAGKDTLTTDLALGHISRAALQRAGFSSLHHYLTADSYRLQERRELAEWYGRRHRQAYEAAAQNTCNKT
complement(730927..731997)         PROPHAGE_Escher_CFT073: prophage P4 integrase; NgFC498_00745; phage(gi26249391)      1.22e-48            NeisseriagonorrhoeaeMAAHNKLTQKQIEAAKADGKQSKLADGGGLYLLLHPNGSKYWRMRYRHGGCEKTLALGVYPAVSLKQARELARAARAQTAAGIDPVAEHHRTRPGSGRSLPEIARAWYGSRQGQRADNTLEGDRRSLAYLTDYYKDNTDINDITTAGVSKFIEHLNRINIPACARRTVQILAQIWDYAVQRGIITDERRNPATTARPLLNTSKPKPQPHIRPDELPDFYRALQTAHDLHPYARPLLLLAALTVPRPSALLSARWQDIDLTTRLWHIPAADMKTKHPFTVPLSDWAVEILRELHTQTGDNIHLFPGIRPRRKPAPHPDHISIKFAHNAIRRLGYDGSTPANPNTPCTDSATSSPTSA
complement(732206..732985)         putative ferredoxin--NADP reductase; NgFC498_00746                                   N/A                 NeisseriagonorrhoeaeMAASPEAKFTEEKILWVKHHTPKLITFAISRPESYRFKAGQFSRLGFYEGKGFIWRAYSVVSAEYADTLEYFAVLIQDGPMSALFAKMQQGDTILLDKNATGFLLPERFPDGKDLVMLCTGSGIAPFLSILEQPEIRQRFDTVNLIHSVSFPEELIFNDRLAALSEHPLVGEYGHSFRFVPVTTRAANPSGLSGKRIPELLKNNSIEQALHTKLTPESTRFMICGNPEMVKDTFQTLLDMGYAMHRNRIPGQIMMENGF
complement(733277..733573)         Uncharacterised protein; NgFC498_00747                                               N/A                 NeisseriagonorrhoeaeMNKNIIYIFSLLITIVIFFIFEKNVISKISFDYNKKEFLISDITNFNWDHVKLYIINSDFQKIVFYDKGKIVFEELIELDRKGKVLPQYLFDSYLKNV
733885..734943                     PHAGE_Salmon_vB_SosS_Oslo_NC_018279: error-prone lesion bypass DNA polymerase V; NgFC498_00748; phage(gi399528790)     8.93e-20            NeisseriagonorrhoeaeMSLRKIIHIDMDAFYASVELREQPHLKGRPVVVAWEGARSVICAASYEARQFGLHSAMSVATVKRLCPQAVYVPPHFDLYRQVSAQIHAVFRRYTDLIEPLSLDEAYLDVTRNFKNIPYAGEVAKEIRAAIFAETGLTASAGIAPNKFLAKIASDWRKPNGQFVLPPHKVMAFLETLPLGKIPGAGKVTLKKMQSLGMRTAGDLRRFERGELLNHFGRYGYRLYDLARGTDEHPVKAERERLQISTEITLPEDLPLGQAAGHLPHLAEDLWRQITRKNVEAQSVTLKLKTYDFRIITRTLTYSSVLPDCAALLQAAQMLMARVPPQTEDAFRLIGIGVGRLVPKNQQQDLWA
737875..737886                     attR                                                                                 N/A                 TCAGACGGCATT

#### region 3 ####
1027652..1029424                   PHAGE_Helico_phiHP33_NC_016568: DNA primase; NgFC498_01049; phage(gi371671350)       1.18e-50            NeisseriagonorrhoeaeMIPSDFIDELLAKTDIVGIIDEQVPLKKGGANYMACCPFHKEKTPSFSVSPTKQFYHCFSCGAHGSAIGFVMEHQGLSFPEAVQFLADRVGMIVPKVRGQNDNPEVRAERKKKQQTLEETTAAAADFYAQQLKFNPAAKAYLDKRGLSAEVIAHYGLGYAPDGWQPLAQVFQPYPNTALVDTGMVIDNEGRHYDRFRHRIMFPIRNPRGQVIGFGGRVLDDSKPKYLNSPDTPLFDKGKNLYGLYEGRAAVKEAERILVVEGYMDVVALAQFGVGYGVAALGTATTAEHVKILMRQADSIYFCFDGDSAGRKAAWRALENALPQLKDDKSLHFLFLPEEHDPDSYIRAYGKAQFEDALLNQSKPLSEYFWEHLSDGIHLNTQEGKAELVKTSSPLLVQITAPALAYLLKQRLSELVGIDPDNLAQLLGQEAPKRHVKQKNYKLPPISVKQPVMPTLVQRQIRSLLINPDWAAYIDLPDYLALDGDFACLANLAETIKNHPSVPATAQVLEHMRGSPYEETIDRIFRSALQSEEMEGGGEEDCENFQIGIKKLLNELKYSQIETLKQKSLQSGLNESEKKLLLSLLTAKQN
1029611..1031539                   PHAGE_Synech_S_CBS3_NC_015465: group 2 RNA polymerase sigma factor; NgFC498_01050; phage(gi331028036)     7.91e-37            NeisseriagonorrhoeaeMSKNQNHEEYQDDARPLTIEEQRARLRQLIIMGKERGYITYSEINDALPDDMSDADQIDNIVSMISGLGIQVTEHAPDAEDILLSDNAAVTDDDAVEEAEAALSSADSEFGRTTDPVRMYMREMGQVDLLTREDEIIIAKKIENALKNMVQAISACPGSIAEILELIEKICKDEIRVDEVVEAIIDPNEVLLNELGLGHLETTAPEKPSNDNSDENEDDEESEEDADEVSAANLAELKQKVIGHFAQIEKDYKKMIGCLEKHHSRHKDYLAYRDAIANKLLEVRFATRQIDSLSSSLRGKVENIRKLEREIRDICLDRVHMERDYFIQNFLPEITNLQWIEEEIAKGRVWSNALDRFRHAILEKQTELADMEKETRISIEELKEINKNMVSSEKETAAAKQEMIQANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKMNRISRQHLQETGEEPDSAKLAELMQMPEDKIRKIMKIAKEPISMETPIGDDDDSHLGDFIEDANNVAPADAAMYTSLHEVTKEILESLTPREAKVLRMRFGIDMNTDHTLEEVGRQFDVTRERIRQIEAKALRKLRHPTRSDRLRSFLDSEDSKL
complement(1031579..1031806)       putative phage associated protein; NgFC498_01051                                     N/A                 NeisseriagonorrhoeaeMRQISLTDYFCKGLGLRAQTLATIAAVRELLNSGQTPPPDYGKRCKACSLVEVCQPELLEKRDGSVGYVEALFIV
complement(1031930..1032277)       phage associated protein; NgFC498_01052                                              N/A                 NeisseriagonorrhoeaeMTAQGKALHERVDSGEPETHKGVRFERTVHVSAEKPGISGILDLVEADTKTGRLKPVEYKRGKPKPDPGDEIQLCAQGLCLEEMTGQTVSEGALWYMQTRHRVPVVFSDGLRPLQ
complement(1032249..1032413)       CRISPR-associated protein Cas4; NgFC498_01053                                        N/A                 NeisseriagonorrhoeaeMTALLTETQRENQDTRLIPLSALQHYAFCPRQCFDSQRAGVGGELFDRAGQGTA
complement(1032420..1032788)       phage associated protein; NgFC498_01054                                              N/A                 NeisseriagonorrhoeaeMKYWLVGASWGGQGHQDQFFVENGYWVLEWESSQQPDQFAKGEKIQVGDRIAIKRMKGQGSSEIKILHIGIVKGVISETNKIICVVDWIVKNLDRNVESRGCFKSIHDPYDKDEWIEKIFCL
complement(1032815..1033357)       phage associated protein; NgFC498_01055                                              N/A                 NeisseriagonorrhoeaeMCKNFFDIRTFGAVMTTEVNSGQVRGPVQLAFAQSIDPIVPPEVSITRMAVTNEKDLEKERTMGRKYIVPYALYRVHGFISANLAAKTGFSDDDLAKLWQALTLMFEHDRSAARGEMAARKLVVFKHDSALGSQPAHKLFDTVKVERVNGESGTPASGFGDYKISVVSDGLNGVSVEEYL
complement(1033523..1033882)       phage associated protein; NgFC498_01056                                              N/A                 NeisseriagonorrhoeaeMFTPSDDEQESAKIFNVLEQIGKGRPLQEIAPELSPNTRFYILGLAPNAARISVRFWLDTTFGQLAENLAHHWQDLALEPCAWKTPPSIWRLLLQTAVLGKSENIQRLGNRCLPETQNP
complement(1034015..1034881)       phage associated protein; NgFC498_01057                                              N/A                 NeisseriagonorrhoeaeMILASLVRYYRRLATETDETGNPKVPSYGFSEEKIGWILVLDKEGRLKTVVPNLTADKKPQPKLMSVPRPEKRTSGIKPNFLWDKTAYALGVEANKNKAEAKEKPFTPSEKTFEAFKQYHLDLLQNSEDEGLQALCRFLQNWQPAHFAAENLPAEMLDSNTAFSLEKPTALIHKREAAQTLWAGCLKSDEALESLCLISGDTAPIARLHPAIKGVFGGQSSGGSIISFNKEAFSSFGKEQGANAPVSEQSAFAYTTALNYLLRRENNHCLTIGDASTVFWAEADDIVD
complement(1035390..1035686)       transposase; NgFC498_01058                                                           N/A                 NeisseriagonorrhoeaeMAYSADLRNKALNHSGLTKIRTRRRTAGSTNGTEPIRPALHHLREPFPLGRGGATPYRFLLIRYITDNAKTPAKPQQRLTCQETRFTCGFALKNKQAA
complement(1035715..1035924)       PHAGE_Mannhe_phiMHaA1_NC_008201: DksA-like zinc finger domain containing protein; NgFC498_01059; phage(gi109289947)     2.53e-10            NeisseriagonorrhoeaeMTDFADRASEREAEFLVEALAKHQPPSENTAGFSHCEDCGDPIPEAKRKAVRGCTRCVVCHEYSQLKTK
complement(1035917..1036207)       phage associated protein; NgFC498_01060                                              N/A                 NeisseriagonorrhoeaeMKRQTKTATVLTALARTACTSTTVPSDTPIKTVAVAEIPPVPSGLLVEYERPERPAGGSPEQLLNHAVRYGGYYRKLEIQIEGWQNWHTKGRLKHD
complement(1036212..1036499)       phage associated protein; NgFC498_01061                                              N/A                 NeisseriagonorrhoeaeMIEFVRAKKRLLWAFVLLLAWACGYRYAADKAEAEQTALIAAYRHSSMVAAEQYALQLKKAQDERQRWYDFSQKQSTDLAAALSELDKTRNTLQE
complement(1036619..1037044)       phage associated protein; NgFC498_01062                                              N/A                 NeisseriagonorrhoeaeMETTDDLFSRTLAILKEANQPQEELLPQLSQLYQKEIGLVPEVDKKTNMIFLETFQSSISQSSILSDIRSLLNEKKYIAKRIKENAEEMYFFSQPAALLVYWLIEKVGADEVWKKWPLPAYNKNLKFICTDLDKQPSHELF
complement(1037254..1037628)       phage associated protein; NgFC498_01063                                              N/A                 NeisseriagonorrhoeaeMSDIDDFKSYLESHQAAFSAWGRFVAEEIQNQLSNVISPVPVANFLKIEAKPGVKEISSALAKIGRKNYTSPQTQMTDLVGVRFVALLAEHIQIVCEIIESSSQWNAKVSKDFADEIQQNPKAI
complement(1037625..1038665)       putative phage associated protein; NgFC498_01064                                     N/A                 NeisseriagonorrhoeaeMKKIITHRIYPKNENRERVEPKISTHLIDLPITARRTLETRLTKALGNKSHGIEMSVVNTAENSFFQIAAAIQLKEEAEFIEDSAQFAHMLTDAQLNTNAPGGILLVLKGRVGDTGKPFLCVIKAEPQDGFRTKEEDDFITIEFLEELLLTDSARLFKIGFLVAETVRPLEQIQSGNYRAFLYDHLMTQTETRPAASYFYQVFLGMSIAASSRKLTQDFFEWTRNFIDNSDLSDDAKLDAHEALRVTLKSAEATISVNNFAQNHLPQEKRTTYTEFMVEKDFPQNAVSKDIEYIKTRLRKRRSYGFSNGVVILTPPEHTQDYMEIAPTEDGEYTVVLIKGQLQQQK
complement(1038899..1039279)       PHAGE_Pseudo_B3_NC_006548: transcriptional regulator; NgFC498_01065; phage(gi56692586)     5.10e-12            NeisseriagonorrhoeaeMEKTSLFGKRLKEERIKLGLNQAEAAEKCGFSREMWGKWERGENRPSSEKLFSFSKIGIDIDYVMHGRRGETAAMPSESLSAEEKELLALFRQLGSGSRKELADYAAFKLVVEKKAQTALGKVSNG
1039370..1039549                   Uncharacterised protein; NgFC498_01066                                               N/A                 NeisseriagonorrhoeaeMNTLKAHARQLMMDHIHPATGKSLFILKQAKTLLLHNRPDVYRAKRPKTKHIIPHERHK
1039488..1039781                   PHAGE_Pseudo_B3_NC_006548: hypothetical protein; NgFC498_01067; phage(gi56692585)     6.26e-05            NeisseriagonorrhoeaeMFIVQRGLKLNTLYHTKGINNIEKPLNFKPIPYPQTRGSTAVWFKRNGVCKTHRAKHFNLERTAVEHPLRGKLKGNFGKSHEAAVKFGLKEDADGDE
1039768..1040052                   PHAGE_Pseudo_B3_NC_006548: hypothetical protein; NgFC498_01068; phage(gi56692582)     3.13e-14            NeisseriagonorrhoeaeMATSKKAQRLLRVFLAMDAHPVIGISNKELSDGLGLTPSQVSRDIDDLVASGLVIKLENGNYAYGIKTLQIAERFRKQQERLNARLQELENRIY
1040089..1040271                   Uncharacterised protein; NgFC498_01069                                               N/A                 NeisseriagonorrhoeaeMATEILGHTVGVTANELAIHSMEVMDKFSGGEAYNETVWIERGRFADAKRWKGCLSRDAR
1040238..1040360                   phage protein; NgFC498_01070                                                         N/A                 NeisseriagonorrhoeaeMEGMFEPGRALIIIKEHTPHGRFAEIAEKELASDGGNPKD
1040360..1040962                   PHAGE_Pseudo_B3_NC_006548: hypothetical protein; NgFC498_01071; phage(gi56692581)     2.05e-25            NeisseriagonorrhoeaeMNATLRFIDPKMKQAQPKLMTLGKSKLLELLVEDDDTLLELAEGGEVNGNTFDDVDRMTIKELRVALRESRETAEAKDKVIADKNKKVDELAEKLSKKQTGVKEPKPADVGIELTMQLGSLEVGIRSQISRLRDMFEQMAAHGEAHGFDHRAKMVGTLNQIILDCEQLRESYALPTEAPADNVPEWLGGETGEGDESGND
1040943..1042721                   PHAGE_Pseudo_B3_NC_006548: putative transposase A subunit; NgFC498_01072; phage(gi56692580)     6.95e-161           NeisseriagonorrhoeaeMNPAMIERLKAVENQAEAMGRGARSAYLKQQAQELGISLATLYRKLEAVSVKPTRKRRSDAGKTELKPEEAKLISAVLAEAMRRNGKRLMPVRQAVEMLRANGKIEAARIDGETGEVIPLSENTITRALREYKLHSDQLLQPDPVSRMKSEHPNHCWQIDPSLCVLYFLPRQGKDTGLRVMKEEEFYKNKPKNVVKIENDRVWRYTGTDHASGTISVRYYFGGETSANLCDFFIYMMQAKKDIGKDPFRTVPRMVMLDPGSANTSAAFKNLCKPLDVHVQINKPGNPRAKGQVEKANDIVETAFESGLRFTEVHDIDQLNALSERWMRYYNGTQKHSRHGMTRYQAWNKIKPEQLILPPPAEYCRELAVSAPKEAKVSADLEIRFGGRVYSVKGIKGILVGKKVLVGKNPWEANGARVATYDAEGNEVWVSVPEVVFDEMGFKADAAVIGAEYKAPADTDAQRHRKELDKLAMGAETLEAAAAKRKGKAVPFGGKIDPYKHQEDTLAASNTLFMPKQGQQMDYNKMEVAEQVLSKVEIAKRLKPRVEADGGDWKQAVSVILKHYPEGVTEGRLEEAFERTRTRCRLKLLKTG
complement(1043032..1043676)       putative DNA polymerase III subunit; NgFC498_01073                                   N/A                 NeisseriagonorrhoeaeMQYGGSPFFFPALGSLHAYKIKAELVGRYHSGCYVSAKNLLKTFTTVRFEKGSDGMLNAKTAALKNGVTDNPPTGLFANKKAARRALSSWAETYGLCPASAGILPDGYAEDEPCPVYVSGRCDKACGRSDEQVLAFAHKLPVLDWGKMHEVEITETDPLTGEKSFCMEWAAHWKWMTGFGISIKIYRMCLRRSLKRTGKILRKSVKSIPVGESW
complement(1043680..1044447)       PHAGE_Clostr_phiCT19406A_NC_030950: hypothetical protein; NgFC498_01074; phage(gi100067)     2.56e-26            NeisseriagonorrhoeaeMIVVSRWPLLEKAFLRFGMPVAVVDLESTGGNLYEDRVTEVALVKFGQGRAERYEWLVNPQKPIPKFVAELTGISDGMVADAPVFAEIAGGLFSVLKGCVLVAHNSRFDYTFLKHEFHRAGIGFSSPALCSVQLSRRLYPQFYKHSLDGIIERLGIVVEDRHRAMADVSALRDYLEYSLSAHGLEEWSRQCFRLTNPKLFPAALPERLRERLYGLPDGTGVLACFDGGGKVNYIGTFERAYGEVAALLDSGKAPV

#### region 4 ####
1107302..1107604                   putative phage associated membrane protein; NgFC498_01140                            N/A                 NeisseriagonorrhoeaeMKTVPTILTGILLATALPASAHGMHKSKPLAMDELPPICQQYFKRTETCYNKAGNKADFARNNTKFLFQALPAADLGQRKQMCQIAMDSFAEKTRNLNCE
1108563..1108730                   putative phage associated protein; NgFC498_01141                                     N/A                 NeisseriagonorrhoeaeMVNEKLAENRKRYEQKRVIKKVSFNAETEKELLEYAQNLDFSQWVKSIIKEKIKK
1108890..1109735                   PHAGE_Haemop_Aaphi23_NC_004827: putative antirepressor protein Ant; NgFC498_01142; phage(gi31544021)     2.29e-46            NeisseriagonorrhoeaeMNAVQVLNFQQNSVRTVADNKGELWFLANDVCEILGYTNPRRTVDLHCKSRGVTKRYTPTTSGEQEMTYINEPNLYRLIIKSRKPAAEAFEEWVMETVLPAIRKTGGCQVGPKTTADDRTGLRQAVAALVGRKGIDYSSAYSMIHQRFNVESIEDLPAGKLPEAVAYVHALTLHTGLTGEVLDAPPKAEPKLPIDGNSLADIAAMVYYGTWMIESGKDISAPLKQLGCRQAVTMWTVWHETRPILKRSAAALEVLRGYADKDASDRIAACLEGIYGKATVR
1109858..1110406                   putative phage associated protein; NgFC498_01143                                     N/A                 NeisseriagonorrhoeaeMPCGSRSANRRSVSCKTLQHSSSNPKMPVQVRRILTRDTAQITVGRQTEIQLETPPCRFRTLRVESLRIRDTESLRQSPINQIPMMYGIDFRLVPVPRHIPRQAIPPGKQPAVTVRRRRKRQLPVALHRINRQPRLRPVAPTRGANIRRLRRNQLQAHRLAVGHKTDTVDFIRITRRKPPAA
complement(1110322..1110597)       PHAGE_Pseudo_F116_NC_006552: hypothetical protein; NgFC498_01144; phage(gi56692957)     1.20e-14            NeisseriagonorrhoeaeMNLKALIARFRVLANDKAEPYFWSDEEVSGWLNDAVHEACLRGRLLHSDDAFVTDVEKGRPLYAYAAGGLRRVMRMKSTVSVLCPTASRCA
complement(1110594..1111079)       PHAGE_Pseudo_F116_NC_006552: hypothetical protein; NgFC498_01145; phage(gi56692956)     1.73e-08            NeisseriagonorrhoeaeMKRRPGICLCGVAVFDNAVRTAAGGWMDKVFIKYIGGRAVWRDRIYHTGLVFEDGQVREVSAGAAAKLLRHGDVFAAVPGKRVEKADDTEALEKAGASELERETAAFDAVQDVILQINRMGKDELELYAKANYGQGLDKRKSAENLRGDVVRMVRQFGIAQ
complement(1111085..1111558)       PHAGE_Pseudo_F116_NC_006552: virion structural protein; NgFC498_01146; phage(gi56692924)     1.30e-30            NeisseriagonorrhoeaeMAEIYVKNNGGNRFGGVPYGNLAAEHYRIVAKQDGAILGADASEPPKAGDVLALGVLEQGFRLDDAQIIVKTAMSSGITADVGFAYADGADDAKVPQDAAYFASGADFASAGRIRCQSAKLVTLPKQALLTVTLKGAENKKAADIDILIYGEKFGQL
complement(1111597..1112907)       PHAGE_Pseudo_F116_NC_006552: virion structural protein; NgFC498_01147; phage(gi56692923)     8.28e-157           NeisseriagonorrhoeaeMAQKTNTAYGDPQAMMKQAAGLFAMHMQRNSTLNRLAGKMPAGTAGAEATLRKQTTQHMPVVRCQDLTRGMGDEIRFNLVNPVSALPIMGDNTAEGRGVGMSLSEAGLRVNQARFPVDGGGTMTNQRSPADYRALIRPAAQSLMDRYADQTLLVHMAGARGFHDNIEWGVPLAGDPKFNDYAVNPVKAPSKNRHFTASGDAVTGVGDNGGELKIASTDLFTMDTVDSMRTVLDQIPLPPPIVKFEGDKAAGDSPLRVWLLSPAQYNRFAADPKFRQLQASAIARASQANQNPLFLGDAGLWNGFILVKMPRPIRFYAGDEMKYCADKFSEAESGLKIPASFADKFAVDRSVILGGQAVLEAFANTGKHGGMPFFWSEKELDHGNRVETLVGTIRGVAKTRFAVDVGGARRKLPTTVSRLWIRWFLCTAVSADSNAA
complement(1112928..1113488)       PHAGE_Pseudo_F116_NC_006552: hypothetical protein; NgFC498_01148; phage(gi56692955)     1.81e-20            NeisseriagonorrhoeaeMRERIEELEKGAEKPGVETADGSDNSLFGDFSDEDVKKGVEKLIQEKLAGYEADMKRQEAAKAHYREIYTAHPDADSIVESRELEEWLAGQNPLVRKAFNDALKDGTAAEVIGAFDMFKAAKSAAEPEKPAEKPPAGKNTPNTLSDIPAGRDHTASDGPPDYLSGNALAEKLASMTEEQVEKFLNS
complement(1113533..1119637)       PHAGE_Vibrio_12A4_NC_021068: hypothetical protein; NgFC498_01149; phage(gi481019131)     5.71e-88            NeisseriagonorrhoeaeMRQFADRTKQEEAGRFFSGPADGNTPHAEELARGTEKQPDVSGIPSEDGAEFLDTGVMPDGLARQYADMAAKYRAKPSEAVGIDPDDGAVSAAAALAADSGAAVPSAVSDDMEARSVADDAPSGRSADADRGGVPSAYGNVRPGGAPRGAASVAPGGSAAAASGGIARVAPLPAGQYFDGLDTRGRKALAKEAGLDIKGVADFGQIAAPVRRKIEQAYHARIEADYQAASEAKQGYLPPPVRMADAVPVPKKGFSVPADALDKESRRRFDALPEWVRRHAQTVADYTADGIMRREAGMADMRGHYPEGLAESAGAVRAYRAQHPESADVLDRLNRAVYGYRRNNGWSVPLLSREGERLQGVRTALPDDGASEAVVGGGRGLTRALPTEDKGLAQDVRQDVRQGLTQGGRGLTPDAGADANAAALQGLPGSAVASGNAPARRQNLQVRARAEGAAPGLSASENLAGTDGGKRAPVAGKRPDTVLPVLNPQVAESAGRVSPKKRMADAAADFTRRLAADRRRPEKAGVPLGGGEYRFEHTDRRHIDALAGVPGRPGKGGMPEEFADMAGPSNSDGLVSDGRRYLKGREAETLRAGGLSEAVPSEPGRDYRPTQEARAPAKVMARPRDAAADGKPAGRAQPARAKDTPVAGKAAAAKNAATEKPSSDKVRNIEAGKSRFDGGKGKSAAAQGAATEKPSEKTGKAKPETFAKTASDNPEEARRKARVLQGGPVYTVKERQAPQGFKALREHAESIKKRLAESIGGLAERVDVAAVSETAPDKAQMLLSQRVEGWFDGRTGKITLVAENLTPERAVWAAWHELGHRGFAADGFAKYREELERADGNGLIRRIADAVQEGREGTGDAAASVRPAAVEEAVAELYAAQRTGGWAGIENRYGVKVGNGLKRGIAGVLARIGALLRRVLQRLAGKAGGAMSDADVFAMLADLHGNVEGARDAPWGGNHRAVMFARAEDGAAERSKSESLEKLRRAETIRISGREVPEGGNLREYKRNALEYGKSLRGPYVNKDTGREISLGRSGITEILRHDYKDAEHLQSIAAIPQIIENAVYIDTLPNEDLAKNGDIQGYEYYVSGLNVGGADYTVRAAVAVSRNGNRYYDHKLTKIEKGNLLSLLDRVSTTGASESKSPLSGIDDKRLLQILQDKDAGKGGIADFDTEAVRFSRAANIEAAIGRITGKKSDLRNALKDRWDASKGIQLQFLGRRQIEDIYGGVLDGLKEYGRLSELFGADANKAVTEADKVVREWGRLKEEDAKALADLMHDATLAKVDADPLMRKDAQKRLDGIRTALDIADGKIEKAEAAVASAGARIARADAAYNKAQRAADKAAYALEKAQEKHGREILADEADMRLRRLFYADSEAKRALRRAGADVAAESRAKTDAVRMLEQARADVKRLEKDEVGAQKALEGLALLNRRFAGLPDAAQRVYRKARDDYRAHFGQVRDALAERLARAGQDAETVRRLKERFDNELGGVYFPLARFGDYLVVVKDADGNSANVSRAETLSEAEKLRDALKADFGAGFKVSPVMKSRDYIRSRDAVGSGFMRELGEAVGMLDLDPAQRARLNDTLTQLYLNSLPDTSWAKHGIHRKGVPGFSDDARRAYAQNMGSGANYLAKLRYADRMAEQLDVMQDFVDGRKYEEGFDQRQLQRVADEMRKRHEAVMNPNPSKLAQALTGFGFLWMMGMSPASAVVNLSQTAMVAYPVMAAKWGYAGAARELLRASKQIGLRFGEKFNTIEDSLNGDEKAAFRKAADYGVIDLSQAHDLAGVANGDPGLAGSAWQKVMDKAAWLFHHAEKFNRQVTFVAAYRLAKRAGADSEAAFEQAKKATYDGHFDYAAQNRPRFMMGNAAKVVFLFKQYSQNILYALGRNAYLAFKGDKQARKTLAGLLVSHAMASGILGLPFVSTLLAVVSMLGSDDDDPWDAEAALRNMLADTFGDKAGEVLAKGFSRLTPLDVSGRLGLDQLVFPDIQDGLEGKKWAESLVVGSTGAVVGAGIGAADGVRTRSSVPRTANTLSLMKSW
complement(1119669..1120883)       phage associated protein; NgFC498_01150                                              N/A                 NeisseriagonorrhoeaeMSDLVRYDPLEHGRLAGGLKEYRGFTQKDARAAADDTALTRGFKNSMRSARMGWNALTGDKEELGRLKAEDMDYRKIQEGRKSQARRELGEAWEKGGGVGDGLSNVWGELKKDWREKGLDGALEDVGEMGGAVLEQAPNALVPIATTTAGGILGALAGGNAAVGAYAGATLGNTLMEYGGQLDRAAEAAGVDPADKDAVMAFIGRGAPGALKNAAVKGAVVGAADMAAMKLGGSILNMGKKAAGKAALEKMGVAAADKAAVAAAKGTPEFAALAKESAKGGLGGAARHAAAYATESAGEFAGEYLGTGLANGEWDEKGAALEAFSSLGHSAVGFAGTKAYAAVTDPLRPPAGRKAGAQGGIGGNRKAGRPAPEGAQALRAAAQAAADGGTGGCGRRRGTGRRGF
complement(1120880..1122076)       phage associated protein; NgFC498_01151                                              N/A                 NeisseriagonorrhoeaeMGLFEPSAGDFWEMKEKEEKEKARKGAEERERAAAQAHRADAVRRTVANYEAGPARYRNVMDLSRNNIEDGARRLRRAGAFERGADAGLGFSGGDKALSPDARAGADFARRDTRPTDAGGRTPPPLGFDGNVYRGGKPVRDFDAQRPLVSSKPDALSPEERELYKRATTPHAGALNGQLTAAQLNAARGIVAEHNKNAAVRELGRERLAAAAAENAANREAVLQKGRFDAAVKANEGALNREMAQRNADRAFDVQQAELGMKRQGFEMKREADALELEDRKRIADLTRAYGFAKSDGQRGEIARQIDALNGKFERQGEKGFDPNVFKTISYEVADPDTGLTAKREGIVDLRTGKPLDVEFAGEREKRYAQLGFKPNGQKTAGGKIIYENEKGEKRVEQ
complement(1122322..1123146)       PHAGE_Salmon_vB_SemP_Emek_NC_018275: antirepressor; NgFC498_01152; phage(gi399498814)     1.12e-39            NeisseriagonorrhoeaeMNNSVQISNISIHQTEIGLFSLNDLHRASGGEDRHAPRRWLQNIQTNDLIKELEKDGKPSIQSKQRLGTFVCRELVIAYGMWISPKFALQVIQTFLAVSDGIKSAKTTADDRTGLRQAVAALVGRKGIDYSSAYSMIHQRFNVESVEDIPAGKLPEAVAYVHALTLHTGLTGEVLDAPPKAEPKLPIDGNALADIAAMVYYGTRMIESGKDVSAPLKQLGNRQAVTMWTVWHETRPILKRSAAALEVLRGYADKDTSGRIAACLEGIYGKATVR
complement(1123467..1124129)       hypothetical protein; NgFC498_01153                                                  N/A                 NeisseriagonorrhoeaeMLKHIKALRFLRVISFVMSAIFFALSLAAKGGAVTNFFILFFVLLIAGSLMSKAINKLNEKEKEKEKIRLLFAQREKFYRILENPEQGFTPPTALLKSGETCFLIDYVNMGEVVTERVRTYTGTRLKLGSTPVYLGGGKSVANEKQKNVAYGELVLTNFRLIFVGNMRSIDLPLDKINSVECFQSSIRISQSGKNKPIFFNTVFNPQLWKEAILVLSDKK
complement(1124201..1124608)       hypothetical protein; NgFC498_01154                                                  N/A                 NeisseriagonorrhoeaeMNQQEFEFMNDLARAFERRYRDTRSLNRCLSIEGRYMGEEACPHKPEIGLRYGEDAMFLTLQAWAKVDAPQQEAVRISFGIGAKSQAAYEERLQAEIRRRGEGPLHLQTDLGLAAWYRAIRQAAGNDFDLLFEKV
complement(1124875..1125255)       PHAGE_Entero_cdtI_NC_009514: holliday junction resolvase; NgFC498_01155; phage(gi148609431)     4.82e-08            NeisseriagonorrhoeaeMRVIRLILPYPVSANRYWRIWRNRAVRSAEAAAYKETVRRIAQGAGAMPSEGFVAVRLRLIPKANKDGGANKTVIDLDNALKVALDALQGVAYHNDRQVRRIAADYADEPVTGGGLAVEVGELDEK
complement(1125246..1125527)       putative phage associated protein; NgFC498_01156                                     N/A                 NeisseriagonorrhoeaeMAEEMRTCKACGGTKPLEKGFNAVPRKEGGVYYYKSCKTCRNKAVRQKRAEKRAAAGAGAMTAARLHGYIRAAHAACPILGAGLWTQPAGECA
complement(1125556..1125705)       phage associated protein; NgFC498_01157                                              N/A                 NeisseriagonorrhoeaeMDTFLKIIATLSFAGAATLAVWLLVEAADAVLRRKRDGKGEDDFDGFGY
complement(1125727..1126182)       PHAGE_Mycoba_Gengar_NC_031035: hypothetical protein; NgFC498_01158; phage(gi100045)     2.37e-08            NeisseriagonorrhoeaeMTVRNTQTETVRTEAAPQQGGNTNPGYYKNRAFECVGFAQYLNFNLGNAFKYIWRHKEKGGREDLEKALRYLERQRADAPKFKKLKCRRYEKMYAGLKDCGFDGGTEAALLAVISAAYYIRDGEDNFAWAAACVEDLLEKMPPEEQRLNNG
complement(1126497..1127279)       PHAGE_Vibrio_X29_NC_024369: IstB-like ATP binding protein; NgFC498_01159; phage(gi658311189)     3.62e-44            NeisseriagonorrhoeaeMALRNASDFLGAYGGGVRVERRQCAEHGGYAAKSVLRGVWTGCPACRKLEAADEMAAYAETLRRGAMRDALEKRIGRSGIAPRFRNCRIENYAVSDSIPGMARAKAAAAEYAANFADVLQTGRSMIFSGRRGTGKNHLACGIAREVIAAGKSALVITVGDMLRTVKDSFGGGGGEAGAVGVFVKPDLLVLDEFGAGSLSETDGRILFSVVNARYERLMPMLVLTNLTAEAFRENTDARIRDRLRDGGGKLIPFDWESYRA
complement(1127294..1128316)       PHAGE_Aggreg_S1249_NC_013597: hypothetical protein; NgFC498_01160; phage(gi100046)     3.57e-15            NeisseriagonorrhoeaeMSARLMGMAFKTGIPRGQRFVLVKLCDCANDEGLCYPSQETLAEDTGFAETAVRQHIKWLKDNNFIKSARRQRGRERKSDIYRINVALLEKCYAEAAKRKAARQAKMWEEPLDYEPSDYEPSDFEPSDYEPSDYEPSDFDAKNHQILSGEPSDFALRTVRFCAKNHQILSGEPSDFDGSLYVEPSVEPSVEPSVEPSGSNARGARAPAGPHPAKPQTAPPETAPAAKAKKTGRHAAELALLAAYGITGQAAADFLQVRKAKRQPLTETAMRLIAADAEKCGMTALQAAEYAIASGWGSFRADWLQNKTFGRSGNRGGPTHNQTAAVPDAGSYGDMPTTDF
complement(1128313..1128540)       hypothetical protein; NgFC498_01161                                                  N/A                 NeisseriagonorrhoeaeMNQKQTQCKQIVDYIRNKGCITSLEAYQNLKVTQLAARITDLEGRGFVFAKPRMKAGGRGKPVTHYSIVKNGAEV
complement(1128773..1129033)       hypothetical protein; NgFC498_01162                                                  N/A                 NeisseriagonorrhoeaeMKKQDRNRLSKKDRRLIKKAMLKAAAKGSDEVYKIAPGLKDGFELLGKQLNQIFVIGIWLRFFGFLMKCSDEYRQFSGLSFGRTAL
1129456..1130160                   PHAGE_Shigel_POCJ13_NC_025434: putative transcriptional regulator; NgFC498_01163; phage(gi725949713)     3.24e-38            NeisseriagonorrhoeaeMTNRDLKAIRIDNLKRFFENKKLPVKDKSLLSQLMSGKASFGEKVSRRLEEEYGMGSLYLDSVPSEPTPVLINPDLPHEVKDIHRPMMWSSNDPLPDDDYVFVPYLKESCFKGGAGAYEIPDYNGYRLPFGKSTLRRKGINPDNVFCCTLTGDSMEEKIAEDAAIAVDTGETAIRDGKIYAFAQDGMFRVKYLIRQPGNSVLIRSHNSGFYPDETAPLDSLSVIGRVFWWSVLD
1130320..1130859                   PHAGE_Salmon_vB_SemP_Emek_NC_018275: hypothetical protein; NgFC498_01164; phage(gi399498806)     8.69e-37            NeisseriagonorrhoeaeMLNAYDVADFFLSPFEEEDGEQISNLKLQKLLYYAQGYALAILNRPLFAENIEHWQHGPVVPCIYRTYKKYGGSPLPAAHIEPDKYADEELVVLNRVRKEQGCYTAWALRNKTHQEAPWIQTRQGEVIGIALMGEYFRHALPQTDYNFNLEKLKTAVEDSFVSVPHFNGADDLEKWLEQ
1130860..1131219                   hypothetical protein; NgFC498_01165                                                  N/A                 NeisseriagonorrhoeaeMQVLLGEDFKRALKNYPKEDRRKIAEFIAHVQQNGLSGLPGRNKSSDNVPADDPQWLEKVRFAQRHNLWHYHIGIPKYNGGRYGDLTSAYILHYTLCDGFIKIIGFDRHPPFILPDIPK
complement(1131236..1131454)       hypothetical protein; NgFC498_01166                                                  N/A                 NeisseriagonorrhoeaeMANSNSGHSKKLRAATAAAATKAKLASGEYRQFSVQGRAEDVELILAAVEKAGGSRVQALAKICRRYLEGLS
1131938..1132138                   phage associated protein; NgFC498_01167                                              N/A                 NeisseriagonorrhoeaeMNELISRINRFGTRAKDGQSLLLKVGEICRDAAATWTTRKSESINHTAFTFTVKKDGLKEKVMIVL
1132171..1132647                   PHAGE_Iodoba_phiPLPE_NC_011142: hypothetical protein; NgFC498_01168; phage(gi197085698)     1.05e-32            NeisseriagonorrhoeaeMEANKFEVKSLSDLIKVFAGIAADFEAAMGVKRADISTEFDEPQHEPQPPVTVAEQKGINDFAIGKEVIIRTYSAGVWFGVLKQKAGNEVILTKARRMYSWWAKESISLSGVARHGIRQDGSQICGELDSVWLEAIEIIPVTGGAAESIRTALEVAQS
1132644..1132931                   phage associated protein; NgFC498_01169                                              N/A                 NeisseriagonorrhoeaeMSYLDQPLKHGYGNGNGSGNGDGYGNGYGKGYGSGYGNGKGDGSGSGYGNGKGDGNGSGNGDGDGNGNGSGNGSGNGDGDGNGNGSGNGSGYGNG
1133072..1133404                   phage associated protein; NgFC498_01170                                              N/A                 NeisseriagonorrhoeaeMKYYGTAAYGSPDWGMERYYAREDMRQALDGWEAENRILHESGLIEIAKKSAREFVRDADGEPYAQEDWETYLTEDASRIGKDTEAAMNYAIDEREWFALAENIGRLANS
1133558..1133836                   phage associated protein; NgFC498_01171                                              N/A                 NeisseriagonorrhoeaeMKTRNIAFKFAVLAAVLAAGYAFGFAKGGGSRTAKGKPAGIAAMRMALAQKQAEVAELSAEIWLEERHLNADEEEAGCRRVHGDAEVPGGKE
1133833..1133994                   phage associated protein; NgFC498_01172                                              N/A                 NeisseriagonorrhoeaeMSFHPETAYNGGGETEPYGPSPEEIKYRQSPETAETRRMTEKQAEGHIKSIIR
1134063..1134749                   PHAGE_Pseudo_RIO_1_NC_021300: putative ssDNA binding protein; NgFC498_01173; phage(gi508178031)     1.89e-10            NeisseriagonorrhoeaeMSLILSVKDESNFKPCPAGSHHATCIRIIDLGTQLVEYQNEQKRQHKILVQWEIDPEGDPEMLMPDGRPYLISRRYTASLHSKSQLATDLKSWRGRDFTPEERDNFDLRNILGKPCLLSIAHQESSDGKTTYANISAISNKMKSYTPKHPDNAVFAFDLSDPDWANYGLLNEKLREQIAKSPEYAEAVNGRQPPAPPQKQAQAAEGQTEYPQGNAAPAEDIEDDIPFN
1134889..1135071                   putative phage associated protein; NgFC498_01174                                     N/A                 NeisseriagonorrhoeaeMANIDLTQWDGKTIGAAANPEQGYINITIGSDDLFINIEQAYAIHAALGEAVAEYEGGAQ
1135068..1135559                   PHAGE_Pseudo_PMG1_NC_016765: hypothetical protein; NgFC498_01175; phage(gi374531698)     2.27e-19            NeisseriagonorrhoeaeMTALTLYRCAADVQAALDYYFDSETEREDTLEAVIGQFEVKAQSVIAYIKNQEITEKMLEEHIGRMTGKLKAAKARNQSLKDYLARNMQAAGITEIKADDGTFKASFRKSEAVVILDEAQIPAEFMREAVKTEPDKTAIRKAIESGRQVAGAKIEGRKNLQIR
1135611..1135826                   phage associated protein; NgFC498_01176                                              N/A                 NeisseriagonorrhoeaeMSYLEDVKNALRVIDNLCKEALKEPESLEGYIDEIRDKADEADTSLEFLKDVINYGISDLKNVIEVFEDCV
1135937..1136920                   putative phage associated protein; NgFC498_01177                                     N/A                 NeisseriagonorrhoeaeMQTVATKPTAKQMLAAKRAAKESTRQERAVKRAGTVKNVDRNRLSARSKAQKENIARMLSGAKVSEDEALTCGIMMRLSLQDMRYACNQELINFAEHIVKQVQRLGLYCNTDDPANGESVLFACREASQAVAQWTKDFDDLSPNQRQLVLRPLSNLFAAYEEFLKDAPARLIAEVSAYSLAVRVAKKAMAFLELDGGLISAVGKVVNGADSRAEARRLKMPYAEFTGRILHAANLLYDVGIQADKELSAMYGKPLNPVRPRRISDVRRPMMKMLVADKGGALVRAVKDSEDVIRHCDNGAGFSCFNWTEHFKRTANLISLMHREAAA
1136917..1137147                   PHAGE_Mannhe_vB_MhS_535AP2_NC_028853: hypothetical protein; NgFC498_01178; phage(gi971749633)     1.47e-13            NeisseriagonorrhoeaeMRTHIRTCVYHDSGTKGFKHGIRHKRHGCRRGGTSVFQRGEDGKPQRVSRIRKRSATPGQAKERTKTHDVSRTQQP
1137119..1137331                   putative phage associated protein; NgFC498_01179                                     N/A                 NeisseriagonorrhoeaeMTFQGHNNRKKAGGYAEYITGGELRLLQQTACRFKAALETAAWKHYVRAIKESEPVPDAEARRKRKKQAA
1137357..1137551                   phage associated protein; NgFC498_01180                                              N/A                 NeisseriagonorrhoeaeMDSEYLDPQQCADILSVKKRTFLERYAPRPDFPARISVSKKRFWWKKEEVEGWLDRQKEKRPVM
complement(1137607..1137691)       tRNA                                                                                 N/A                 GCGGACGTGGCGAAATTGGTAGACGCACCAGATTTAGGTTCTGGTGCCGAGAGGTGTGAGAGTTCGAGTCTCTCCGTCCGCACCA
1137842..1138516                   Uncharacterised protein; NgFC498_01182                                               N/A                 NeisseriagonorrhoeaeMPAALIKDFLLTQGLKLPLDEVRAAYLTAQTVMDMGMASIDRSVLWCNDEGWKLADYLPCDDVREDALKRLFMALDSVFSRSTGVRSAAVYALMPSENAALRLVCLSQQGEGLENIWEQDGNITDVSLACRSAQSGWMNVASDVRRWLNLGELSGERNHASAAQISIPVCTESGGVLGVVHVEFECAECADTAAQAEWVALALALSEPLKQLLGITAAEGDENV
1138509..1139102                   GTP cyclohydrolase II; NgFC498_01183                                                 N/A                 NeisseriagonorrhoeaeMSELLDHVASCRLPTEWGVFTMHGFEEANGQEHVALTVGNCSDGNPVLTRIHSECLTGDALFSRKCDCGPQLEAAMRAVQAEGRGIIVYLRQEGRGIGLINKIRAYHLQEQGMDTVEANLALGLPVDARDFRLAQSIYEYLGIRSVKLLTNNPEKIQTLKDAGINVVERIPLHVGENLENERYLQTKADKLGHLMSE
1139270..1139470                   glycosyl transferase family protein; NgFC498_01184                                   N/A                 NeisseriagonorrhoeaeMIFSIIVPIYNVEKYLRCCVDSVLAENFADYEMILVDDGSPDGCGKICDEYAGKYPHIRVIPCVTP
1139455..1140417                   PROPHAGE_Shewan_MR-1: IS110 family transposase; NgFC498_01185; phage(gi24375433)     5.62e-09            NeisseriagonorrhoeaeMRNAVGLDISKLTFDATAIVGNAEYSAKFDNDSKGLDQFSDRLKSLGCQNLHICMEATGNYYEEVADYFAQYYSVYVVNPLKISKYAESRFKRTKTGKQDAKLIAQYCRSAQESELVKRQKPTDEQYRLLRMTAAYAQIKSECAAMKNRHHAAKDEEATKAYAQIIKAMNEQLEVLKEKIKEQTEKPNCKEGVKRLETIPAIGRMTAAVLFHHLTSSKFETSNKFAAFAGLSPQQKESGTSVRGKGKLTKFGNRKLRAVLFMPAMVAYRIRAFPGFIKRLEEKKKPKKVIIAALMRKLAVIAYHVHKKGGDYDPSRYKSA
complement(1141050..1141409)       phage associated protein; NgFC498_01186                                              N/A                 NeisseriagonorrhoeaeMIHKPRYIKIVDENGDFTRVLRLHKFPDTSKVFYFEPMFWLKDGRLARKDSLFEVDYIYGADGCGFLPSNLTEFRKYCRKKHQKFKDDEVLVNRYAVDFLGAKEPPYDDRHVTSVKYFV
complement(1141530..1142615)       PHAGE_Ralsto_RSS1_NC_008575: hypothetical protein; NgFC498_01187; phage(gi118430720)     4.22e-31            NeisseriagonorrhoeaeMIYLFTGNMGAGKTPRVVSMILNNEDGLFKMELEDGTEADRPLYFCHIDGLDKRKFNARELAEGQIMSAPLRDVIPEGAVLIVGEAHYTYPVRAAGRPVPPYIQELTELRHHGHTVILMTRHPSQLDIFVRNLVSKHVHLERKAIGMKQYYWYKCVTSLDNPAGVSGVEAANWKPPKEAFKYYKSSSRHQKFKKKVPWAVWALIAVVGFVGWKSYGMFQVYSKATDSRIEQEAQKESVVQTMTEQTASSETAPFEHSDNLKPEDFVPTLPEKPESKPIYNTVRQVKTFEQIAGCIDGGKSDCTCYSNQGTPLKEITKIMCKEYVKNGLPFNPYKDERQRTEQAAQSAKADKPQVLVMGGKP
complement(1142625..1142915)       ribonuclease H; NgFC498_01188                                                        N/A                 NeisseriagonorrhoeaeMPLLSGLIPLLGILLKMLIVRIILATGLTFVTYAGYLAALEKFKGYTSNAINSMPSDILNLLLISGFGQGLGCLFGAFSFFIGMHAFKKLTFVFPG
complement(1142916..1144484)       virulence factor protein TspB; NgFC498_01189                                         N/A                 NeisseriagonorrhoeaeMNSFIKSTPIVLILILCSSNSYSEPVRLEKSQIKFQSSNNLKSIGFKLDSSSNSFSKFTEAANFEHIPTGAKARINAKITASVSRAGVLSGVGKLVRQGAKFGTRAVPYVGTALLAHDVYQTFKEDIQARGCRYDPETDKFVKGYEYANCLWYEDERRINKTYGCYGVDSSIMRLMPDRSRFPEVKQLMESQMERIARPFWDKRKEEIPKDTALKWRLFPFSHCEFFWNGGGCFVRNGDNLIHRVYFKLERNPKYKEEMDAKKPEEILSLKVDADPDKYIKATGYPGYSEKVEVAPGTKVNMGPVTDRNGNPVQVAATFGRDAQGNTTADVQVIPRPDLTPASAEAPHAQPLPEVSPAENPANNPDPDENPGTRPNPEPDPDLNPDANPDTDGQPGTSPDSPAVPDRPNGRHRKERKQGEDGGLSCDYFPEILACQEMGKPSDRMFHDISIPQVTDDKTWSSHNFLPSNGVCPQPKTFHVFGRQYRASYEPLCVFAEKIRFAVLLAFIIMSAFVVFGSLGGE
complement(1144426..1144743)       phage associated protein; NgFC498_01190                                              N/A                 NeisseriagonorrhoeaeMNKPFITQAQLALYKYQPSSEYFGQSMAFIAQKEFEEFVNNVKEYDILESFSYFLNKRVAHNIWKIYFSDESVIFIRKSEENGKTVHEFVYQEYTDSSDFNSMFE
complement(1144871..1145149)       putative phage associated protein; NgFC498_01191                                     N/A                 NeisseriagonorrhoeaeMYCQVGNKCLEKHRAENLYFSLVVPRIKENGQIIRPEYNGSMWKMSDGQPLRLSLAECSPKDNLQSGLETGRIVFGVLASVYFVSLLKKVLK
complement(1145156..1145374)       phage associated protein; NgFC498_01192                                              N/A                 NeisseriagonorrhoeaeMKFINTCRKYGAKLAVVTAAPLALAAQANAALPETAKNALEAAKADGMEAGWIVVGVFAALFVFSIVKRVMK
complement(1145448..1145645)       phage associated protein; NgFC498_01193                                              N/A                 NeisseriagonorrhoeaeMQKVYVVQSVSTGDFLYLSPETGDIGHTKLITNADYFYDFEEAVNAGLEEIGNQCEFVVFGFLKD
complement(1145650..1145940)       phage associated protein; NgFC498_01194                                              N/A                 NeisseriagonorrhoeaeMNIQLQGHIVGVKKFNGQIEGKSFDYCRLIVATPLDSSQGNALGSSTTEYDFGGSANFEQFRNAQFPIEANLNVEIVTTGKTQKLKVIGFQLVKKG
complement(1145985..1147334)       PHAGE_Ralsto_RSS1_NC_008575: hypothetical protein; NgFC498_01195; phage(gi118430713)     2.35e-22            NeisseriagonorrhoeaeMEDKQGMTKEVAGVMTEAPADGRKPTTASNLPPPPYLTGGGTETETAGRVQEVFECYETYITDGKGNLLGVPLRRGVSDSAFIDQITFSIHEDTFFHVYGLSFDLFDDDDFIRAASAKMEEIFGFGIIEKAKHSGGRFYEGCWLMGTENAQYGRVHYGGQRETMLVELTAVGCNAANIGWESRLFDFLTNAIRPKITRVDIAKDFFNGEYSPNQAREDRNKGLFTCHHVKPKGECLGSDWEEDDEAKMTKGKTYGIGSRESSKYVRVYEKGKQLGDKTSTWTRFEIEFKAKDIVIPFEVLQNPGEYFGGAYPICERFAQKATRIHAVKEDKVVSADRCLEWVKKQFGRAANGLKFIFPELDKAKLFELIEPSHHKLPKSLALEAYDCAFLKSQVIHEQPAFKPYNDPYYMYEYYENLEKQLEQQKHVNNEESYNNFIYDKFARLPISWA
complement(1147473..1147895)       PHAGE_Burkho_KL3_NC_015266: gp46; NgFC498_01196; phage(gi327198091)                  9.07e-40            NeisseriagonorrhoeaeMTDIFTPSKRSFVMSKIHSKETKPEVLVRKFLFSQGFRYRKNDKRYAGKPDIVLPKYKTVVFIHGCFWHGHSCNKGHIPKSNMDFWLEKITKNRERDIKNETELEKIGFKVIVVWECELKNKAICRERLNRLVEEIKDAV
complement(1147901..1148497)       Protein of uncharacterised function; NgFC498_01197                                   N/A                 NeisseriagonorrhoeaeMKGESGVDIENWKNKLPEKEREPVEVILNRLEDSELTNKEQAEVISALHSIIPEYPYYHWRHLHQDLHTACNDFYNEKKDYLSAAIEAVKVFEDKVQKQTGLHSIDGRELIEKAFGSKKSMLLLTNNKTQAEQNLEDGLEQLACGTWTGFRNPVQHELRANLSPSIFNDKDALDLISLVSYLLRKVEQTKKRAKPTSP
complement(1148687..1149544)       HSP90 family protein; NgFC498_01198                                                  N/A                 NeisseriagonorrhoeaeMSEEKLKMSFEPTVIEHLGVKMYSHTVPAIAELIANAYDACATEVEVRLFDKPEHKIVIKDNGIGMSFDEINDFYLRIGRNRREEKQASPCGRIPTGKKGLGKLALFRLGNKIEISTIQGNERVTFTLDYAEIKKSERIYQPEFQKESVKPNTENGTTITLTELTKKQGYPLDNYVGHLSRLFDFPAQDFKIKVSLNGSEPRIIDGNLKYNLVTPQFEWEYQDLATNISSLSSKFEQYEYSGLIQGKFITTEKPLKNNMKGITLFANGRMVNMPEFFTDSESSHF
complement(1149558..1150016)       PHAGE_Halovi_HGTV_1_NC_021328: AdoMet-MTase; NgFC498_01199; phage(gi509140530)       4.63e-11            NeisseriagonorrhoeaeMENGFPKIMAGHQDETDFMHSCAGLSDINLKRLALIPKNGGNRLAFAHIPELQLECFIGKDNSFKDTFGRLWWDKPAPTITTKFFSISNGRFAHPEEDRALSLREGATLQSFPRNYVFKAGSRDKIARLIGNAVPPMYAEKIGRAIVDNIEC

#### region 5 ####
1619140..1620195                   PHAGE_Synech_S_SSM7_NC_015287: transaldolase-like protein; NgFC498_01655; phage(gi326783962)     2.87e-06            NeisseriagonorrhoeaeMTILSDVKALGQQIWLDNLSRSLVQSGELAQMLKQGVCGVTSNPAIFQKAFAGDALYADEVAALKRQNLSPKQRYETMAVADVRAACDVCLAEHESTGGKTGFVSLEVSPELAKDAQGTVEEARRLHAAIARKNAMIKVPATDAGIDALETLVSDGISVNLTLLFSRAQTLKAYAAYARGIAKRLAAGQSVAHIQVVASFFISRVDSALDATLPDRLKGKTAIALAKAAYQDWEQYFTAPEFAALEAQGANRVQLLWASTGVKNPAYPDTLYVDSLIGVHTVNTVPDATLKAFIDHGTAKATLTESADEARARLAEIAALGIDVETLAARLQEDGLKQFEEAFEKLLAPLV
1620207..1620341                   Uncharacterised protein; NgFC498_01656                                               N/A                 NeisseriagonorrhoeaeMPSERLSDGIALLTGHSAAYQGSALKILMGKKLMHDITRQHKRK
1620346..1620636                   Uncharacterised protein; NgFC498_01657                                               N/A                 NeisseriagonorrhoeaeMAKALEIISPDEIYSDLIFKDPVPPHTIYTELMKLVGRNAGNERIADRAFDFFSPALMDDSATEEQYNALYDLTLLEEPGMELDKDEITALINSLK
1620653..1621540                   glutamyl-Q tRNA(Asp) synthetase; NgFC498_01658                                       N/A                 NeisseriagonorrhoeaeMYTGRFAPSPTGLLHIGSLLTAVASYADARSNGGKWLVRMEDLDPPREMPGAASHILHTLEAFGFEWDGEVTYQSRRYALYEETLYRLKTAGLVYPCHCNRKDWQAGARRGTDGFVYNGRCRHPGQRPALQGKQPSWRIRVPDRDIGFSDGIVGSYTQNLARDIGDFVLFRADGYWAYQLAVVADDAEQGVTHIVRGQDLLVSTPRQIYLQQCLGVPTPQYAHLPLLTNAQGQKWSKQTLAPALDSNRREQLLRQVFRYLKLPEAPETDRPAELLDWAVAHWDMDKVPKHAITAP
complement(1621610..1622656)       tRNA-dihydrouridine synthase A; NgFC498_01659                                        N/A                 NeisseriagonorrhoeaeMFELKECENLMINKELIEHKGKRRLCVAPMLDWTDRHYRYLARQITRNAWLYSEMVNAGAIVYGDKDRFLMFNEGEQPVALQLGGSDPSDLAKAAKAAEEYGYNEVNLNCGCPSPRVQKGAFGACLMNEVGLVADCLNAMHDAVGIPVTVKHRIGVDRQTEYQTVADFVGTLRDKTACKTFIVHARNAWLDGLSPKENRDVPPLKYDYVYRLKQEFPELEIIINGGITTNEAIAGHLQHVDGVMVGREAYHNPMVMREWDRLFYGDNRAPIEYADLVQRLYTYSQVQIQAGRGTILRHIVRHSLGLMHGLKGARTWRRMLSDATLLKDNDGGLIFEAWKEVERANTRE
1622514..1622525                   attL                                                                                 N/A                 TTTCGGGTAATC
1622746..1623900                   PHAGE_Burkho_AH2_NC_018283: integrase; NgFC498_01660; phage(gi399529076)             7.99e-56            NeisseriagonorrhoeaeMATITKRRNPSGETVYRVQVRVGKKGYPAFNESRTFSKKALAVEWGKKREAEIEAGPELLFKRGKVKMMTLSEAMRKYLNETLGAGRSKKTGLRFLMEFPIGGIGIDKLKRSDFAEHVMQRRRGIPELDIAPIAASTALQELQYIRSVLKHAFYVWGLEIGWQELDFAANGLKRSNMVAKSAIRDRLPTTEELQTLTTYFLRQWQSRKSSIPMHLIMWLAIYTSRRQDEICRLLFDDWHKNDCTRPVRDLKNPNGSTGNNKEFDILPMALPVIDELPEESVRKRMLANKGIADSLVPCNGKSVSAAWTRACKVLRIKDLRFHDLRHEAATRMAEDGFTIPQMQRVTLHDGWNSLQRYVSVRKRSTRLDFKEAMMQAQSDIKSGK
complement(1623950..1624216)       PHAGE_Entero_mEp460_NC_019716: hypothetical protein; NgFC498_01661; phage(gi428782341)     6.77e-06            NeisseriagonorrhoeaeMNISKEQGLLIAYGGRPYIPPREVHKDFFAHIGFNAFKASGVRCELPFPIFRLSDSRKSEYFVSVRELAKAIADKEEKAKSEYRKFRS
complement(1624324..1625271)       PHAGE_Mannhe_vB_MhS_587AP2_NC_028743: hypothetical protein; NgFC498_01662; phage(gi970580043)     2.34e-116           NeisseriagonorrhoeaeMTFQGHNNRKKAGGYAEYITGGSLRRLVAAKVRRYCGEHPGVFDGAAGSGQLEQYIEPSDFRAVEIQAEACKALLQNYPAAKVYNTSLFLYTDGEPQDCTVMNPPFSIKLKDLSEDEKSRIAQEYPWKKSGVADEIFVLKGLENARRFGFFILFPGIAYRKSEQRFREIIGNRLAELNRIQNAFEDTPIEVLLLVIDKDKTDGGCIRELYDCKTDTLLAADTWQIEPDLWQTVQEPAPPKEKEDPVLLEHECRDAAAKRIARELRFSKMVNEIEGWPHAEFDGFCDRLCNLIQAEKYGKKHYFPCSLPLFGGAAG
complement(1625243..1625473)       PHAGE_Mannhe_vB_MhS_535AP2_NC_028853: hypothetical protein; NgFC498_01663; phage(gi971749633)     3.59e-13            NeisseriagonorrhoeaeMRTHIRTCVYHDSGTKGFKHGIRHKRHGCRRGGTSVFQRGEDGKPQRVSRIRKRSATPGQARERTKTHDVSRTQQP
complement(1625470..1626453)       putative phage associated protein; NgFC498_01664                                     N/A                 NeisseriagonorrhoeaeMQTVATKPTAKQMLAAKRAAKESTRQERAVKRAGTVKNVDRNRLSARSKAQKENIARMLSGAKVSEDEALTCGIMMRLSLQDMRYACNQELINFAEHIVKQVQRLGLYCNTDDPANGESVLFACREASQAVAQWTKDFDDLSPNQRQLVLRPLSNLFAAYEEFLKDAPARLIAEVSAYSLAVRVAKKAMAFLELDGGLISAVGKVVNGADSRAEARRLKMPYAEFTGRILHAANLLYDVGIQADKELSAMYGKPLNPVRPRRISDVRRPMMKMLVADKGGALVRAVKDSEDVIRHCDNGAGFSCFNWTEHFKRTANLISLMHREAAA
complement(1626564..1626779)       phage associated protein; NgFC498_01665                                              N/A                 NeisseriagonorrhoeaeMSYLEDVKNALRVIDNLCKEALKEPESLEGYIDEIRDKADEADTSLEFLKDVINYGISDLKNVIEVFEDCV
complement(1626831..1627322)       PHAGE_Pseudo_PMG1_NC_016765: hypothetical protein; NgFC498_01666; phage(gi374531698)     2.27e-19            NeisseriagonorrhoeaeMTALTLYRCAADVQAALDYYFDSETEREDTLEAVIGQFEVKAQSVIAYIKNQEITEKMLEEHIGRMTGKLKAAKARNQSLKDYLARNMQAAGITEIKADDGTFKASFRKSEAVVILDEAQIPAEFMREAVKTEPDKTAIRKAIESGRQVAGAKIEGRKNLQIR
complement(1627319..1627501)       putative phage associated protein; NgFC498_01667                                     N/A                 NeisseriagonorrhoeaeMANIDLTQWDGKTIGAAANPEQGYINITIGSDDLFINIEQAYAIHAALGEAVAEYEGGAQ
complement(1627641..1628327)       PHAGE_Pseudo_RIO_1_NC_021300: putative ssDNA binding protein; NgFC498_01668; phage(gi508178031)     1.89e-10            NeisseriagonorrhoeaeMSLILSVKDESNFKPCPAGSHHATCIRIIDLGTQLVEYQNEQKRQHKILVQWEIDPEGDPEMLMPDGRPYLISRRYTASLHSKSQLATDLKSWRGRDFTPEERDNFDLRNILGKPCLLSIAHQESSDGKTTYANISAISNKMKSYTPKHPDNAVFAFDLSDPDWANYGLLNEKLREQIAKSPEYAEAVNGRQPPAPPQKQAQAAEGQTEYPQGNAAPAEDIEDDIPFN
complement(1628396..1628557)       phage associated protein; NgFC498_01669                                              N/A                 NeisseriagonorrhoeaeMSFHPETAYNGGGETEPYGPSPEEIKYRQSPETAETRRMTEKQAEGHIKSIIR
complement(1628554..1628832)       phage associated protein; NgFC498_01670                                              N/A                 NeisseriagonorrhoeaeMKTRNIAFKFAVLAAVLAAGYAFGFAKGGGSRTAKGKPAGIAAMRMALAQKQAEVAELSAEIWLEERHLNADEEEAGCRRVHGDAEVPGGKE
complement(1628986..1629318)       phage associated protein; NgFC498_01671                                              N/A                 NeisseriagonorrhoeaeMKYYGTAAYGSPDWGMERYYAREDMRQALDGWEAENRILHESGLIEIAKKSAREFVRDADGEPYAQEDWETYLTEDASRIGKDTEAAMNYAIDEREWFALAENIGRLANS
complement(1629459..1629746)       hypothetical protein; NgFC498_01672                                                  N/A                 NeisseriagonorrhoeaeMSYLDQPLKHGYGNGNGSGNGDGYGNGYGKGYGSGYGNGKGDGSGSGYGNGKGDGNGSGNGDGDGNGNGSGNGSGNGDGDGNGNGSGNGSGYGNG
complement(1629743..1630219)       PHAGE_Iodoba_phiPLPE_NC_011142: hypothetical protein; NgFC498_01673; phage(gi197085698)     1.05e-32            NeisseriagonorrhoeaeMEANKFEVKSLSDLIKVFAGIAADFEAAMGVKRADISTEFDEPQHEPQPPVTVAEQKGINDFAIGKEVIIRTYSAGVWFGVLKQKAGNEVILTKARRMYSWWAKESISLSGVARHGIRQDGSQICGELDSVWLEAIEIIPVTGGAAESIRTALEVAQS
complement(1630252..1630452)       phage associated protein; NgFC498_01674                                              N/A                 NeisseriagonorrhoeaeMNELISRINRFGARAKDGQSLLLKVGEICRDAAATWTTRKSESINHTAFTFTVKKDGLKEKVMIVL
complement(1630774..1631334)       hypothetical protein; NgFC498_01675                                                  N/A                 NeisseriagonorrhoeaeMDIKTEEAYRLSFQHIQSHDVLAACRTVANYELSQPRPRGLFSGISAQEYWESYPCNEDAEILKSILLDSPEILDGISGGDMEMARIMAAFNFIWGLSHFPKWLHRHEFASTPLDDSAVPAMLLFHAQSRQELKEYEEVELSCCPDGCEFCKSEDGKIYKSSDAPVLPHAHCTHEQGCRCCYLPVI
complement(1631334..1632032)       PHAGE_Haemop_Aaphi23_NC_004827: putative CI protein; NgFC498_01676; phage(gi31544010)     6.43e-67            NeisseriagonorrhoeaeMNRVDRIKNLIADRFNGNQAEFSRAINKAPAQINQWLNGYRNIGDGVAAQIEIALGLPRGWVDGNDKPGIPVDSIKSNATVIGSVDAWDSKTPLSDDDCEVPFYKDVCLSAGNGFSDEIEDYNGYKLRFSKSTLRRHGINPDDVVCVSADGDSMEPVFPDGATLGINTADKMIKDGKIYAINHSGLLRTKILQKLPDNQVRIKSYNPEYKDETASLDSLTVIGRVFWWSVLD
1632146..1632376                   PHAGE_Entero_c_1_NC_019706: prophage antirepressor; NgFC498_01677; phage(gi428781783)     5.60e-07            NeisseriagonorrhoeaeMDLRDYCAIRGNQSDLARKTGISPSFIHQIAKGLKPVPIQSAALIEKSTNGRVTRKEMFPDTWHLIWPELADDQPK
1632479..1633378                   PHAGE_Aggreg_S1249_NC_013597: hypothetical protein; NgFC498_01678; phage(gi100046)     6.80e-17            NeisseriagonorrhoeaeMKYIPNSFQIANAVVDDFLCRMSGNAWKCYAVIVRKTTGWQKEIDYISVSQFKNLTGIKTDVTVADALKELVELNLIASVKRHGQVTGYRINMPEPSPENGGTPPPENGGTATPKNWVHPKNGTTPKNWGVLPPENGGTTTPKNWGSTKHTTKPTNTKHSISASAAADAPLSAEPPESGKRAPAAKAKKTGRHETELSLLADYGITGQVAADFLQVRKAKRQPLTETAMRLIAADAEKCGMTALQAAEYAIASGWGSFRADWLQNKTFGRSGNRGGPTHNQTAAVPDAGSYGDMPTTDF
1633393..1634175                   PHAGE_Vibrio_X29_NC_024369: IstB-like ATP binding protein; NgFC498_01679; phage(gi658311189)     3.62e-44            NeisseriagonorrhoeaeMALRNASDFLGAYGGGVRVERRQCAEHGGYAAKSVLRGVWTGCPACRKLEAADEMAAYAETLRRGAMRDALEKRIGRSGIAPRFRNCRIENYAVSDSIPGMARAKAAAAEYAANFADVLQTGRSMIFSGRRGTGKNHLACGIAREVIAAGKSALVITVGDMLRTVKDSFGGGGGEAGAVGVFVKPDLLVLDEFGAGSLSETDGRILFSVVNARYERLMPMLVLTNLTAEAFRENTDARIRDRLRDGGGKLIPFDWESYRA
1634490..1634984                   PHAGE_Mycoba_Gengar_NC_031035: hypothetical protein; NgFC498_01680; phage(gi100045)     2.41e-08            NeisseriagonorrhoeaeMTVRNTQTETVRTEAAPQQGGNTNPGYYKNRAFECVGFAQYLNFNLGNAFKYIWRHKEKGGREDLEKALRYLERQRADAPKFKKLKCRRYEKMYAGLKDCGFDGGTEAALLAVISAAYYIRDGEDNFAWAAACVEDLLEKMPPEAGRAPHPESPMPPETAGGGI
1635161..1635310                   phage associated protein; NgFC498_01681                                              N/A                 NeisseriagonorrhoeaeMDTLLSIITALSFAGAATLAVWLLVEAADAVLRRKRDGKGEDDFDGFGY
1635339..1635620                   putative phage associated protein; NgFC498_01682                                     N/A                 NeisseriagonorrhoeaeMAEEMRTCKACGGTKPLEKGFNAVPRKEGGVYYYKSCKTCRNKAVRQKRAEKRAAAGAGAMTAARLHGYIRAAHAACPILGAGLWTQPAGECA
1635611..1635991                   PHAGE_Entero_cdtI_NC_009514: holliday junction resolvase; NgFC498_01683; phage(gi148609431)     2.31e-08            NeisseriagonorrhoeaeMRVIRLILPYPVSANRYWRIWRNRAVRSAEAAAYRETVRRIAQGAGAMPSEGAVAVYVRLIPKANKDGGANKTVIDLDNALKVALDALQGVAYHNDRQVRRIAADYADEPVAGGGLAVEVGELDEK
complement(1636320..1637282)       PROPHAGE_Shewan_MR-1: IS110 family transposase; NgFC498_01684; phage(gi24375433)     5.98e-09            NeisseriagonorrhoeaeMRNAVGLDISKLTFDASAMVGKTEHSAKFDNDSKGLDQFSDRLKSLGCQNLHICMEATGNYYEEVADYFAQYYSVYVVNPLKISKYAESRFKRTKTGKQDAKLIAQYCRSAQESELVKRQKPTDEQYRLSRMTAAYAQIKSECAAMKNRHHAAKDEEAAKAYAQIIKAMNEQLEVLKEKIKEQTEKPNCKEGVKRLETIPAIGRMTAAVLFHHLTSSKFETSNKFAAFAGLSPQQKESGTSVRGKGKLTKFGNRKLRAVLFMPAMVAYRIRAFPGFIKRLEEKKKPKKVIIAALMRKLAVIAYHVHKKGGDYDPSRYKSA
complement(1637792..1638151)       phage associated protein; NgFC498_01685                                              N/A                 NeisseriagonorrhoeaeMIHKPRYIKIVDENGDFTRVLRLHKFPDTSKVFYFEPMFWLKDGRLARKDSLFEVDYIYGADGCGFLPSNLTEFRKYCRKKHQKFKDDEVLVNRYAVDFLGAKEPPYDDRHVTSVKYFV
complement(1638272..1639357)       PHAGE_Ralsto_p12J_NC_005131: ORF7; NgFC498_01686; phage(gi156535142)                 3.88e-13            NeisseriagonorrhoeaeMIYLFTGNMGAGKTPRVVSMILNNEDGLFKMELEDGTEADRPLYFCHIDGLDKRKFNARELAEGQIMSAPLRDVIPEGAVLIVGEAHYTYPVRAAGRPVPPYIQELTELRHHGHTVILMTRHPSQLDIFVRNLVSKHVHLERKAIGMKQYYWYKCVTSLDNPAGVSGVEAANWKPPKEAFKYYKSSSRHQKFKKKVPWAVWALIAVVGFVGWKSYGMFQVYSKATDSRIEQEAQKESVVQTMTEQTASSETAPFEHSDNLKPEDFVPTLPEKPESKPIYNTVRQVKTFEQIAGCIDGGKSDCTCYSNQGTPLKEITKIMCKEYVKNGLPFNPYKDERQRTEQAAQSAKADKPQVLVMGGKP
1653303..1653314                   attR                                                                                 N/A                 TTTCGGGTAATC

#### region 6 ####
1658177..1658701                   PHAGE_Salmon_SSU5_NC_018843: putative ribonuclease H; NgFC498_01710; phage(gi410491500)     8.90e-47            NeisseriagonorrhoeaeMPISIRRNLSDGTTHKPLIITPDTTQRHDMDTPVYLYTDGACKGNPGAGGWGVLMRYGSREKELFGGEAQTTNNRMELTAVIEGLKSLKRRCTVIICTDSQYVKNGMENWIHGWKRNGWKTAAKQPVKNDDLWQELDALVGQHQVSWTWVKGHAGHAENERADDLANRGAAQFS
complement(1659032..1659994)       PROPHAGE_Shewan_MR-1: IS110 family transposase; NgFC498_01711; phage(gi24375433)     5.98e-09            NeisseriagonorrhoeaeMRNAVGLDISKLTFDASAMVGKTEHSAKFDNDSKGLDQFSDRLKSLGCQNLHICMEATGNYYEEVADYFAQYYSVYVVNPLKISKYAESRFKRTKTGKQDAKLIAQYCRSAQESELVKRQKPTDEQYRLSRMTAAYAQIKSECAAMKNRHHAAKDEEAAKAYAQIIKAMNEQLEVLKEKIKEQTEKPNCKEGVKRLETIPAIGRMTAAVLFHHLTSSKFETSNKFAAFAGLSPQQKESGTSVRGKGKLTKFGNRKLRAVLFMPAMVAYRIRAFPGFIKRLEEKKKPKKVIIAALMRKLAVIAYHVHKKGGDYDPSRYKSA
complement(1660504..1660863)       hypothetical protein; NgFC498_01712                                                  N/A                 NeisseriagonorrhoeaeMIHKPRYIKIVDENGDFTRVLRLHKFPDTSKVFYFEPMFWLKDGRLARKDSLFEVDYIYGADGCGFLPSNLTEFRKYCRKKHQKFKDDEVLVNRYAVDFLGAKEPPYDDRHVTSVKYFV
complement(1660984..1662069)       PHAGE_Ralsto_p12J_NC_005131: ORF7; NgFC498_01713; phage(gi156535142)                 3.88e-13            NeisseriagonorrhoeaeMIYLFTGNMGAGKTPRVVSMILNNEDGLFKMELEDGTEADRPLYFCHIDGLDKRKFNARELAEGQIMSAPLRDVIPEGAVLIVGEAHYTYPVRAAGRPVPPYIQELTELRHHGHTVILMTRHPSQLDIFVRNLVSKHVHLERKAIGMKQYYWYKCVTSLDNPAGVSGVEAANWKPPKEAFKYYKSSSRHQKFKKKVPWAVWALIAVVGFVGWKSYGMFQVYSKATDSRIEQEAQKESVVQTMTEQTASSETAPFEHSDNLKPEDFVPTLPEKPESKPIYNTVRQVKTFEQIAGCIDGGKSDCTCYSNQGTPLKEITKIMCKEYVKNGLPFNPYKDERQRTEQAAQSAKADKPQVLVMGGKP
complement(1662079..1662369)       membrane protein; NgFC498_01714                                                      N/A                 NeisseriagonorrhoeaeMPLLSGLIPLLGILLKMLIVRIILATGLTFVTYAGYLAALEKFKGYTSNAINSMPSDILNLLLISGFGQGLGCLFGAFSFFIGMHAFKKLTFVFPG
complement(1662370..1663164)       virulence factor protein TspB; NgFC498_01715                                         N/A                 NeisseriagonorrhoeaeMDAKKPEEILSLKVDADPDKYIKATGYPGYSEKVEVAPGTKVNMGPVTDRNGNPVQVAATFGRDAQGNTTADVQVIPRPDLTPASAEAPHAQPLPEVSPAENPANNPDPDENPGTRPNPEPDPDLNPDANPDTDGQPGTSPDSPAVPDRPNGRHRKERKQGEDGGLSCDYFPEILACQEMGKPSDRMFHDISIPQVTDDKTWSSHNFLPSNGVCPQPKTFHVFGRQYRASYEPLCVFAEKIRFAVLLAFIIMSAFVVFGSLGGE
1663504..1663788                   phage associated protein; NgFC498_01716                                              N/A                 NeisseriagonorrhoeaeMKLLAALIPLLMSVAGRILTALGLMAVTYAGVDRLAAHFQQAITHSITGAPQAMLQLFYISGGGTVLNILFGAIAFILSFKQMTKLATSIGKKK
1663789..1664976                   PHAGE_Ralsto_p12J_NC_005131: ORF7; NgFC498_01717; phage(gi156535142)                 7.64e-24            NeisseriagonorrhoeaeMAEICLITGTPGSGKTLKMVSMMANDEMFKPDENGVRRKVFTNIKGLKIPHTHIETDAKKLPKSTDEQLSAHDMYEWIKKPENVGAIVIVDEAQDVWPARSAGSKIPENVQWLNTHRHQGIDIFVLTQGPKLLDQNLRTLVKRHYHIAANKMGLRTLLEWKVCADDPVKMASSAFSSIYTLDKKVYDLYESAEIHTVNKVKRSKWFYALPVIILLIPLFVGLSYKMLGSYGKKQEEPAAQESAATEQQAVLPDKTEGESVNNGNLTADMFVPTLPEKPESKPIYNGVRQVRTFEYIAGCIEGGRTGCTCYSHQGTALKEVTELMCKDYVKNGLPFNPYKEESQGQEVQQSAQQHSDRAQVATLGGKPQQNLMYDNWEERGKPFEGIGGGVVGSAN
1665191..1666135                   PROPHAGE_Escher_CFT073: transposase; NgFC498_01718; phage(gi26248352)                3.32e-09            NeisseriagonorrhoeaeMNIIGPDISKDTIDATLHKTNGSIHYIKFKNNDDGLKQFRLWIKGNRIRKVYIGMEATGIYYEKAADMLSSYYTVYVINPLKINDYGKSRFNRTKTDKADSNLIADYIKRHQDTLIPYQIPKNKALQKLINLKNQLQQQQKQIKNRLHSTEEDFIRNIHQDLIDTIQDKMEQVKIAISEQIKKQTDNNHYRNLQTIPSIGKDTASVLYAQLTEKHFKTANQFVSYAGLSPAIIQSGTSVRGRGRLSRYGNRRLKSTLYMPALCAYRFNAFPKLINNLKKAGKPKMVIIVAIMRKLAKPAYYIVKTGQPYDAERH
1666438..1666977                   PHAGE_Pseudo_vB_PaeS_PAO1_Ab18_NC_026594: putative baseplate hub subunit and tail lysozyme; NgFC498_01719; phage(gi764160573)     1.57e-50            NeisseriagonorrhoeaeMTELPWIAEARRHIGLKEIPGAKHNPTIVQWLKETGGFPGAAKSWYFEDETPWCGLFVGHCLGKAGRAVIRDWYRAKAWSMSGLTKLEAPAYGCIAVKPRRGGGHVFFVVGKDAEGRILGLGGNQGNMVSIIPFDPADIDGYFWPSKLIGGKAVPSSPAEGRYRLTAAAATAKQGAGEA
1666978..1667322                   PHAGE_Entero_vB_KleM_RaK2_NC_019526: hypothetical protein; NgFC498_01720; phage(gi422936900)     2.32e-09            NeisseriagonorrhoeaeMIGALLKNWKPLLILSAIAFFAVSWQLDRAAQYRRGYGAAVSEVSERLKAAAVEHAEHARKSSAAYQAQKAAREEKERVRYVQTLKIIEKPVYRNACFDADGVRELNAAVDDGG
1667261..1667479                   PHAGE_Nitrin_1M3_16_NC_024217: hypothetical protein; NgFC498_01721; phage(gi643655216)     8.31e-05            NeisseriagonorrhoeaeMPVLMLTACANSTPPLTTAVKPPADLVRPCPKLPYLEGNTGADVLPWSLQVIGLYKDCKARHGALVRALGAD
1667839..1668219                   phage associated protein; NgFC498_01722                                              N/A                 NeisseriagonorrhoeaeMPLKFQPRERSVIMCDFRGYEEPEMVKKRPVVVIARNRHNGKLVTVVPLSSTEPVPLADCHHKMSENPLPDKPHIQCRAKCDMTATVGLARLDRYKPKGRDRCIPIISEEDFQAVKTAVAKAFKLY
complement(1668424..1669266)       PHAGE_Haemop_Aaphi23_NC_004827: putative antirepressor protein Ant; NgFC498_01723; phage(gi31544021)     3.60e-41            NeisseriagonorrhoeaeMQNTISVFSFKSQNVRTQILGAEPWFCLGDVAEILQIQNARQLPLKDQGIQKSSVATKKGNQELLFINEPNLYRVIFRSRKAEAVKFQDWIFEEVIPQIRKTGGYQITPKTTADDRTGLRRAVAALAGCKGIDYSSAYSMIHQRFNVEAIEGIPADKLLEAVAYVHALTLHTGLAGEVPDREPLPAPQPALPISGNALADIAAMVYYGTWMIESGKDVSLPLKQLGCKQAVTMWTVWHETRPILKRSAAALEVLRGYADKDASGRIAACLEGIYGKAAVR
complement(1669765..1669941)       putative phage associated protein; NgFC498_01724                                     N/A                 NeisseriagonorrhoeaeMNPTKQSKKSYESKRVLKHVSFNTEKEANLLEFSNNLDFSKWVKEKLKHELELEKLKK
