gi||ref|AP018447.1| Helicobacter cinaedi P06D0798 DNA, complete genome. 2165979, gc%: 38.48%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
1700421..1700432                   attL                                                                                 N/A                 AATTTTTGTGTT
1707304..1708737                   PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; PP_01893; phage(gi100064)         6.24e-07            MILHRGGGEHSVSFDVDYFNGIIRTSPNNSFMDIKNPSKDDRKTPGNGSLHNTQQRLDVSLGYKGELSENSKLDVKAFYHLNRINYIDSLTRLSSFRAMGKASYNASADQSGSLFDDQKAGITAKYDLKHTNGLFILGVESIWNRGKRTMDQMIQATAYKHRILVPFVGTKWSNALYALEKYDFSKSFSLTGGARYEYAYYDIDVSYFSDMTISNTTNGSLTDSLHNYALELTPNYRYSDSGNLYAKYEKGYFSPSPNSMLRRGSRASYTATNLKKETYDTFELGIKDFLGDSVMLSASAFYTLTHNEFYTQGNAHSVSGVTYGNYDKTQRAGLELFAEQYLFGGGLSLSESFTYIDARILQNNGANVSNLKIPYVSNYKGTIGANIALGRIFSLWSQNTFFGTSYDITQEKIKPYNLTDIGLNAKFGDLSLSAGVRNVFDTFYYSYYNHDSKDQIAGYAFLIGQGRSAFIEGRYTF
1709247..1709408                   hypothetical; PP_01894                                                               N/A                 MEVKHTNLYKRNGIIYIDATLTEIGRVRFSTKLKDTKENMAKTLLSAKDLVSR
1709419..1709565                   PHAGE_Helico_phiHP33_NC_016568: integrase/recombinase; PP_01895; phage(gi371671343)     6.42e-06            LWVSSMLGHKSLQTTFQHYVKYIPQNKKRASFLDNFTLKTHSTQKDSL
1709562..1709714                   hypothetical; PP_01896                                                               N/A                 MSFWYVCKECGYINEVDCIEINIQIKLNSQKAVSCICSECDNRQDIIIEV
1709717..1709863                   PHAGE_Helico_KHP30_NC_019928: putative DNA helicase, putative DNA repair protein; PP_01897; phage(gi431810548)     3.68e-05            MIELEKEIMASFLAYPQQIDEFLAQIPKEYFTQKGQRTLEILIELLES
1709867..1710247                   PHAGE_Helico_phiHP33_NC_016568: DNA repair protein; PP_01898; phage(gi371671349)     1.45e-05            VSKNAFVGKLSKKEQEQDYFLDILSHIPNANVVRLTQSFYESFLKQKEAGLKLLEASENNALLDMNALIPNVNFCSHKNMQEWQDYYDTLPKMPKYKTGINFLDSVFDGGDRICPACFNQWRPRNR
1710380..1710697                   PHAGE_Helico_phiHP33_NC_016568: DNA repair protein; PP_01899; phage(gi371671349)     2.87e-21            VAQNIKTLYKQGVRVFLIDSQMRLVSPNGRNIEEEESLKFSTLARLCHSLGILVFLIVQTSKGDRDNPMGSKKGGHESSITIRIEHDKPKNESVREFSEDSRIVI
1710814..1710936                   hypothetical; PP_01900                                                               N/A                 MRNALSLRCFLGSLRFRARSYLSGSAEARNANLQKLNLKK
1710958..1711398                   PHAGE_Lactoc_TP901_1_NC_002747: REP; PP_01901; phage(gi13786544)                     1.17e-05            MIQKNQQLNNFTILSSDILHDKSLSMGARMFYALAQSFSDDWNINIKHFAKLLNVSEASVRKFRNELVNASLLAYSQVRDEKGKLTQESVYTFNTLEVVDFQYVSEKVERLDLVEQEATNTENVESYPFKHLSAYGYSSDLSNIII
1713484..1713495                   attR                                                                                 N/A                 AATTTTTGTGTT

#### region 2 ####
1796665..1798461                   PHAGE_Entero_JenK1_NC_029021: glutamine amidotransferases class-II (GATase) / queuosine biosynthesis QueC ATPase; PP_02015; phage(gi971766407)     3.82e-09            MCGIVGYIGRDEKKQILLNGLKELEYRGYDSAGIAVLSLDELQTFKTVGKLENLESKCRDFSFQGFGVSIGHTRWATHGKPTEANAHPHIADFSNVVHNGIIENYQELKTMLESKGHSFISQTDTEVIVHLFEEKLKNTQDCYTAFTSTIAELKGAFAILLITKLAPDSIFYAKNGSPLIIGKSASQEDEIYFASSDAPLIGFVDSVVYLNDGDMGVMKLGSFSQLKNPKKLDSSKGYAQKEGFRYFMEKEIYEQHKVLLETMMGRVSEGDITLSEIESGFFDDIQSISICACGTSYHAGLSAKYLFERLAKIKTNVLIASEFRYAKPVMDKNELFIVISQSGETADTLEALKLAKKNGLKSLAICNVDNSSIVRESSVSLLTRAGIEKGVASTKAFATQMMLLWILSVYVGKLRGHIKQDELKTHIAQMVESAKATKVDSAMHEHIKRLSKRYLHGHGFFFIGRDIFYPLALEGALKLKEISYLHAEGYPSGEMKHGPIALADAELFTLALMPKHLLFDKIKSNVEELSARDATICAVSTEQIQGVDDMLLVQPCQSYMEEFFSMMVVLQIFALEVAIRLGNDVDMPRNLAKSVTVE
complement(1798465..1798938)       hypothetical; PP_02016                                                               N/A                 MSALMLLGLGLGCIVAEIFFGSFFLLFIGLGLCITAGIEAFVGFGNIIGGSVESVYAWQAVSICAFAFLTLILLRKPIKSWFKGSKVYEDSLQNGGGVGEIQQGMVYFKGTLWAYEKALTLDSNGLESGTLESNTPLKEGDRVQVLEIRDNKAIIKA
complement(1799043..1799945)       PROPHAGE_Escher_Sakai: FtsH protease regulator HflC; PP_02017; phage(gi15834405)     1.06e-08            MLIFTGVVLVLCVAVLAFGIKIISQTDIAIVERLGRFHRVLDGGFHFIIPIIDRLSAVVSAREQMIDIGRQQVITKDNVNINIDGIVFLKVFDAKSAVYSVNDYKQAIANLATTTLRGEIGRINLDDSLSSRDRLNAALQVALGDAANNWGVKIMRVEISEISVPKDIENAMNLQMKAEREKRAIELKAQAEKEALIRNAEALKQEKVLQAEAIERMADAKKYEQIALAQGQSDAMELIANQMSKNAQAAEFLLTKERIVAFTELSKNPSKDKVIVPYETSEFIGGLSVIGEFLGKGKKA
complement(1800150..1801391)       hypothetical; PP_02018                                                               N/A                 MDKVLQEILQIDSSRECIKFLVKRVQSDNYRGLQISQHNRYTQKEILVILQEIYELCGDTLLQIRTSDLSKRPYNIEGEEKYAELTTKISSKLGRCTQDSLRKNIFVDLHRMGLIDRFNAKKKQLNPFDNGTKKYIALTDFGIEFLQSTDIFTHNLLFTRALENLMQGFGEEILHIILELKSNSLTLYEVLFFVTFLYQKLDSKTYNRSDIISLIRDYRTLSKFQKQALLEKVKDYCEPKNFSGDKTQKRDFHNFLNETQQILSLLTQMAYFEHNKNDSKLYIRTGTYGIYEDNTKLKRSIKEKDLYFEKHNITKEKGFELHHIVPLCLAASRAEFQIIDKWENMVYIDAFSHAKITQNNNANMRLSFENDNANFSDFNDCVVHCENNINIKYDTEKQELMLDYNKRILDSKV
complement(1801391..1801795)       PHAGE_Pseudo_H105/1_NC_015293: adenine-specific DNA methyltransferase; PP_02019; phage(gi327198531)     1.95e-16            MDSKSYCFNPESIRVPYESTSRIEHAKKNGILKNGKRWYPNENGKLCPDVWEIASQRHKQKVNGKTQKLHHPTIKPKEMIERMIKASSKKGDLVLDLFSGSGMTSLVARDLERNFIGCEASIEYVDSSLNIKEC
complement(1801825..1802157)       PHAGE_Vibrio_VP58.5_NC_027981: gp53 protein; PP_02020; phage(gi937456124)            1.03e-09            MLNKIYIQDCFSFLESLTDSSIDLAIIDPPYNLKIASWDSFKSEKEFLAFSYKLIDLLLPKMKKNGSFYIFNTPYHCALFLHYLQEKAVFQNFITWYKKDGLSYTKKNAL
complement(1802147..1802587)       PHAGE_Sulfol_YNP1_NC_029027: putative type II restriction modification system, methylation subunit; PP_02021; phage(gi971767019)     1.63e-22            MFGSYPYPRNFYVQNTSEFITIYVKDGKPQNTPQELKEQSKLSQKEWVQFTKQIWDIPIPNKADSAFGKHAAIMPEIIPYRLIKLYSFIGDIVLDPFAGSGTTLKVAKELGRNFIGYEIYPHYKSVIEEKLGESGLFAMQGQGNAQ
complement(1802615..1802779)       hypothetical; PP_02022                                                               N/A                 VLKPNGELCINVPLMPMFKRDLNTHYNRHIFDLQSDIQHSILESTPLFLLDLYI
complement(1802845..1803009)       PHAGE_Sulfol_STSV1_NC_006268: Cytosine methylase, similar to N4-cytosine methylase; PP_02023; phage(gi51980192)     3.85e-05            MNKIFYKSSQNMCEVSECSVDLIITSPPYFNIKDYSKDGYQNVKHSAVAGGRGI
complement(1803035..1803172)       hypothetical; PP_02024                                                               N/A                 LLQFVESFIKALQKECIKSVVLWQEKEREACKNVVKCDYKTNKAK
complement(1803196..1803399)       hypothetical; PP_02025                                                               N/A                 MFDNGLFSFTYKNDDEIVIITSSSNRITDKQGILAVLHNKPIFLPEQLDVRPDPLALQYNKDKFLLR
complement(1803601..1804353)       hypothetical; PP_02026                                                               N/A                 MRQVNMRHKRSNTDLFFDSFKHLKHNLSNLIGVELPTLCCFGAKRYLSLISTNYKSKYPDMRKLGLIDYNKPSDYSFSLSLEAEKIKEAFGNFWGIYAYDENIIKSGRKNIDSLPPEDLISPIPHINFYKYKLSILQLILSYYDTADSIRPYLVLLNYMKNYGIRNLNRDLLQNILAHTKEDILLMRYNQNAFVSLDDETKIELNRPISYIYNFLITALVVDYSYNIIVDFNLVDSLNARMNNNVLYYFT
complement(1804353..1806422)       PHAGE_Sulfol_SMV3_NC_029103: putative DNA methylase N-4/N-6; PP_02027; phage(gi985760728)     3.37e-53            MAKKLLNSQCYQLHDFTQQSLQEILNGDSLYILKNHIADNFIDIIITSPPYNVAHKYENYNDDLDFESYLNAMRDIFKECYRVLKDDGRICVNVPFAVKNRDSKEVRFLSVYMTQILNEIGFKEFELITWHKGKDIKHFQGNNTAWGSWKSPSCPSFRPLGESVLVFYKNNRIHKHGGGGLLADITSQEFKEWTKNVWYFDKDSKQGFENILCASNNAKKDLHPAPYPEELIERLLKIYSYENDIVLDPFNGTGTTSYVANSLNRQFIGIELSSKYCEIAINRLKNTKKPIIKSYPKTMASLVNNDDTLNSLNEVFPYKEAFSPYLIEHLKNKFNCSIASVYDPFCGVGSSLLNSQIQICYGFDTSLFALSVAKAKLEKLEYKNLKKAEKIVKEFSANSDKDYPFPQWKSFDKYADKKRFNLIMDFVKSFKILDSKIYHFVSFLVFCNLEKMLHFKKDGNGIKYRESKIKDVVSYLKTLTLRAFALKKELDEKHNKVIILKNCSSIENKPKDKVDCVLTSPPYANLFDYFEIYKMELWSSQIVTNYEEWKNLKKSALRNNKNTALRQQDKIDNALLNQTIEILKNKALESSVLTMLNNYFFDMQKVLKNCFEVLKDNGFCFIVVGNSCYKGVPIQTDEILAQEAQKLGFECKEIIIARKLKTSSQQMKIIDSKAKFYLRESIIVLQKEK
