gi|00000000|ref|AP018749.1|  Klebsiella pneumoniae KP33 plasmid pKP3302 DNA, complete genome. 102910, gc%: 50.98%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(14094..14597)           PHAGE_Shigel_SfIV_NC_022749: IS1 transposase B; TRKP_p0021; phage(gi557307573)       1.66e-110           KlebsiellapneumoniaeMSRQCTHYGRWPQHGFTSLKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTLATLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELYDKVIGHYLNIKHYQ
complement(14608..14820)           hypothetical protein; TRKP_p0022                                                     N/A                 KlebsiellapneumoniaeMYDGDFKVLAWLPFPSDVLPAPLLKAWCVTAKALPDISAISALIAVKHGNYSSLTPPLSPVRTRKSLIWP
complement(14982..15863)           PROPHAGE_Escher_CFT073: insertion element IS2 transposase InsD; TRKP_p0023; phage(gi26249446)     4.30e-129           KlebsiellapneumoniaeMDSARALVAKGRGIALVSRTMGVSRAQLSLRINRSADWQDKRCNRRNDEADEEILSAILDIISDMPSYGYRRVWGILRKQRRTEGQPPVNAKRLYRIMSEHNLLLLHDKPERPKREHKGKIAVAESDMRWCSDGFEFGCDNGEKLRVTFALDCCDREAIDWAASTGGYDSSTVQDVMLRSVEKRFGDRLPDTAVQWLTDNGSAYTAYETWRFARELNLEPCTTAVSSPQSNGMAERFVKTMKEDYIAFMPKPDVRTALRNLAVAFTHYNENHPHSALGYHSPREYRRQRTSLT
complement(15821..16216)           PROPHAGE_Escher_CFT073: transposase insC; TRKP_p0024; phage(gi26251004)              4.84e-56            KlebsiellapneumoniaeMSNTNANFEMTGILLGQEARKRKTPQEKIAIIQQTMEPGMNVSHVARLHGIQPSLLFKWKKQYQEGSLTAVAAGEEVVPASELTAALKQVRELQRLLGKKTMEVEILKEAVEYGQSRKWIAHAPLLPKDGE
16369..16764                       PHAGE_Shigel_SfIV_NC_022749: IS1 transposase B; TRKP_p0025; phage(gi557307573)       4.32e-86            KlebsiellapneumoniaeMIVCAEMDEQWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTLATLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVNSKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHYLNIKHYQ
16918..17088                       Mobile element protein; TRKP_p0026                                                   N/A                 KlebsiellapneumoniaeMAYDFKEAFFCIYDEPDKQSAQNAFEAWKNSLPPYGMEPFKKLVKTVHVSVQREPY
complement(17099..18637)           PHAGE_Stx2_c_1717_NC_011357: transposase; TRKP_p0027; phage(gi209447153)             0.0                 KlebsiellapneumoniaeMNSLLPDDIDELKRLLAEQEALNRALLEKLNEREREIDHLQAQLDKLRRMNFGSRSEKVSRRIAKMEADLKQLQKESDTLTGRVDDPAVQRPLRQTRTRKPFPESLPRDEKRLLPAASCCPECGGALSYLGEDAAEQLELMRSAFRVIRTVREKHACTQCDAIVQAPAPSRPIERGIAGPGLLARVLSSKYAEHTPLYRQSEIYGRQGVELSRSLLSGWVDACCRLLSPLEGALQDYVLTDGKLHADDTPVPVLLPGNKKTKTGRLWTYVRDDRNAGSELAPAVWFAYSPDRKGIHPQSHLAGFSGVLQADAYAGFNELYRNGQITEAACWAHARRKIHDVHVRTPSALTEEALKRIGELYAIEAEIRGMPAKRRLAERQQKAKPRLKSLESWLREKVKTLSRHSELAKAFTYVLNQWPALAYYTDDGWAEADNNIAENALRMVSLGRKNYLFFGSDHGGERGALLYSLIGTCKLNGVEPESYLRHVLDVIADWPINRVSELLPWRVALPTE
complement(18686..19033)           PHAGE_Stx2_c_1717_NC_011357: transposase; TRKP_p0028; phage(gi209447152)             2.10e-76            KlebsiellapneumoniaeMIPLPSGTKIWLVAGITDMRNGFNGLAAKVQTTLKDDPMSGHVFIFRGRNGSQVKLLWSTGDGLCLLTKRLERGRFAWPSARDGKVFLTPAQLAMLLEGIDWRQPKRLLTSLTML
complement(19030..19434)           PHAGE_Stx2_c_1717_NC_011357: truncated transposase; TRKP_p0029; phage(gi209447151)     7.52e-42            KlebsiellapneumoniaeMKSLTAVRKKSPNYPVEFKIKMVELSHRPEISVAQLAREHGINDNLLFKWRQYWREGKLRPPSTTENNVPELLPITLDAEDVVPATSPRSQPVAAAAPESLNISCEVTFRHGSLRLNGAISENILNLLIRELKR
19425..19667                       PROPHAGE_Xantho_33913: ISxac3 transposase; TRKP_p0030; phage(gi21231086)             7.02e-13            KlebsiellapneumoniaeMISWIASTIFGVHYPLRNFRICQTVLRRRLQKERIRKRIYKTRDLARADIFDYIEVFYNRARRHSHLGGVSPEAFEQASS

#### region 2 ####
complement(92334..92588)           PHAGE_Escher_HK639_NC_016158: DNA pol III theta; TRKP_p0118; phage(gi356870660)      3.83e-22            KlebsiellapneumoniaeMSQWNIASFSKEEQDKVAVDKVAADVAWQERMNKPVMPELVEREQPEHLREYFHERFRVHRLNSQQLPRANAPEYNKPGDDQQN
complement(92634..92753)           hypothetical protein; TRKP_p0119                                                     N/A                 KlebsiellapneumoniaeMQIGAAARKSWQASPAGEAVRHTCGAAYWPHLNRSPVKD
complement(92825..93250)           PHAGE_Pseudo_YuA_NC_010116: hypothetical protein; TRKP_p0120; phage(gi162135127)     2.30e-14            KlebsiellapneumoniaeMYHARQTMLNVEESDRLSFLPDLFGNDFLAGEMQVYALAEKHITDYCGGFWHFIRIPEGGGYMMPDGDRFHLTNPDNWFDRSVSADAAGVIITALAINRRIWLHHERGDAALTRHLMLRESQLWNFIDSHDECAAIYAALD
93288..93509                       hypothetical protein; TRKP_p0121                                                     N/A                 KlebsiellapneumoniaeMCRADTTARRKAEDARATPEAAAQIKHEAGLDGFRAKPERENDGKNGELHKKTATGRGWRRQRTLASAAAGLK
93548..93706                       hypothetical protein; TRKP_p0122                                                     N/A                 KlebsiellapneumoniaeMRSPVAVYERREKSRSWHRDAMAAYKGRRPEGGGRTKRSRRQRQAGDVLIRC
complement(93771..94118)           hypothetical protein; TRKP_p0123                                                     N/A                 KlebsiellapneumoniaeMLFLQKQGNFRRIAASPENRYLIKCNILKYSAFILSGVIMNTGLRQVLRYAGVPVDAAEPVRRQFGSRLILIVTVALLPLLIVDVPLWLFVLSQIIWGSGMYIGISVASDKPDRR
complement(94235..95722)           PHAGE_Pseudo_phi3_NC_030940: protector from prophage-induced early lysis; TRKP_p0124; phage(gi100001)     2.68e-36            KlebsiellapneumoniaeMMYGEEKSDSLIVAAKQANNPKGAESVERRSGAKGNAEQPHMRRTQSRESMSQRLSRVREAAKQRKKERFTALFHLLTVEALEAAFLSLSRKAAAGVDGIRWMDYAGNMKNNITDLHRRLHQGSYRAQPGRRHYIPKADGKQRPLGIASLEDKIVQYALVKILNAVYENDFMGFSYGFRPGRSQHDALDALATGLVRTNVNWVLDADISQFFDRVSHEWLIRFTEHRIGDRRVIRLIRKWLTAGTSEEGQWRATEEGTPQGAVISPLLANIYLHYVFDLWAHQWRRRYATGNVVMVRYADDIVIGFDKRYDARRFRIAMQRRLREFGLTVHPEKTRLMEFGRFAAENRAIRGKGKPETFNFLGFTHISGKDRNGRFMLIRKTRRDRMTATLKAIKDGLRRRWHYSIPEQGKWLRRVVQGYLNYHSVPGNFPTMQKFRTHVTNLWRRALRRRSQKDDTTWTKANKLAAAWLPRVRVLHPWPVERFTARHPRQEPGA
96125..96550                       PHAGE_Cronob_ENT39118_NC_019934: protein umuD; TRKP_p0125; phage(gi431811072)        7.88e-32            KlebsiellapneumoniaeMKFIPAVSEASIVKIPLFTERCPAGFPSPASDYTESELDLNEYCIHRRHSTYFVRAIGNSMTDIGLYSGDLLVVDKAEQPRHGDIVIAEIEGEFTVKRLLLTPRPALQAMNPDFPSLYPDPETLQIFGVVTAFIHKTRRAD
96550..97821                       PHAGE_Cronob_ENT39118_NC_019934: DNA polymerase; TRKP_p0126; phage(gi431811050)      0.0                 KlebsiellapneumoniaeMFALADVNSFYASCEKVFRPDLRGKPVVVLSNNDGCVIARSAEAKLLGIKMGTPWFQLKEAQFPEKLYVFSSNYELYASLSNRVVALLEELSPRVEQYSIDECFLDARGIGHCMDLEDFGRQLRGHVLSGTGLTIGVGFGATKTLAKSAQWASKEWPQFRGVLALSPENPRRTAKLLSLQPVEEIWGVGNRIAKKLHVMGITTALQLSLTNPTFIRKNFNVVLERTVRELNGESCISLEEAPPPKQQIVCSRSFGQRITTYEEMRQAVCQYAERASEKLRGERQYCRHISTFIKTSPFAVNEPYYGNVATEKLNTPTRDTRDIIAAAVRSLDRIWLDGHRYAKAGIMLNDFSPNGVAQLNLFDDVQPRPHSDALMKVLDGINHSGLGKVWFAGRGIAPDWQMKREMLSPAYTTRWKELPVARF
97960..98115                       RelB/StbD replicon stabilization protein; TRKP_p0127                                 N/A                 KlebsiellapneumoniaeMATASAGGGYPVAIIDRNRPVFYCVPAALYEQMLDALDEKDLVQLLTSSPP
complement(98138..98995)           PHAGE_Entero_If1_NC_001954: hypothetical protein; TRKP_p0128; phage(gi9630756)       7.69e-157           KlebsiellapneumoniaeMKLDQTNNRISLPKLGWIRYRNSREVIGEVKNVTVIQSCGKWYVSIQTEYEVPEQVHKAASMVGLDAGVTKLATLSDGTVYQPVNSFKASQRKLAMLQRQLSRKVKFSASWQKQKKKIQRLHSHIANIRRDYLHKVTSEISKNHAMIVIEDLKVSNMSKSAKGTAERPGRNIRAKSGLNRSILDQGWYEMRRQLEYKQLWRGGQVLAIPPAYTSQRCACCGHTAKENRQTQSKFVCQVCGYTENADINGARNILAAGHAVLACGGMIQSGRPLKQEPTEASQAPV
complement(98992..99336)           PROPHAGE_Escher_Sakai: putative transposase; TRKP_p0129; phage(gi38704244)           1.63e-65            KlebsiellapneumoniaeMKRLQAFKFQLRPNGQQERDMRRFAGACRFVFNRALALQNENHEAGNKYVSYTKMASWLIEWKSHPDTQWLKDTPSLPLQQSLKDLERGYKNFFQKRAAFPRFKKRGQNDARKA
complement(99811..100773)          hypothetical protein; TRKP_p0130                                                     N/A                 KlebsiellapneumoniaeMRTRFSLRLSPFTSFPFSQARKHNWPEYSLWDHGPTCIVGQVICLGPRSHLRHRSGYLPGTTVPPASSVRLSVWDHGPTCVICQVICLGPRSHLRHLSGNLSGTTVPPASSVRLSDWDHGPTCVVGQVICLGPRSHLRHRSAYLSGTTVSPASSVSLSVWDHGPTCVVGQVICLGPRSHLRHRSGNLPGTTVPPVSPVRLSPWDHGPTCVIGQVICLGPWSHLRRRSAYLPGTTVPPASSVSLSAWDHGPTCIVGTLLVRDNGSINACHEQVLACRQQPDERSNHAAGRLLQAMVKALLGSERSMLSEICKISQSMQLNL
complement(100773..101744)         PHAGE_Yersin_PY54_NC_005069: partitioning protein SpyB; TRKP_p0131; phage(gi33770536)     1.13e-113           KlebsiellapneumoniaeMKRAPVIPRHTTHTQSTEDTSSPAPAAPMVDSLIARVGAMARGNAISLPVCGREVKFTLEVLRGDSVESASRVWSGNERDQELLTEDALDDLIPSFLLTGQQTPAFGRRVSDVIEIADGSRRRKAAILTESDYRVLVGELDDEQMAALSRLGNDYRPTSAYERGLRYTSRLQNEFAGNISALADAENISRKIITRCINTAKLPKSVVALFAHPGELSARSGEALQKAFADKEELLKQQAETLHDQKKAGLIFEAEEVISLLTSVLKQSPASRVNLSSRHQFAPGATALYKGDKMVLNLDKSRIPAECIEKIEAILKELEKPGV
complement(101744..102910)         PHAGE_Klebsi_phiKO2_NC_005857: plasmid partition protein SopA; TRKP_p0132; phage(gi46402111)     0.0                 KlebsiellapneumoniaeMGLMDTLNQCISAGHEMTKAIAIAQFNDDSPEARKITRRWRIGEAADLVGVSSQAIRDAEKAGRLPHPDMETRGRVEQRVGYTIEQINHMRDVFGTRLRRAEDAFPPVIGVAAHKGGVYKTSVSVHLAQDLALKGLRVLLVEGNDPQGTASMYHGWVPDLHIHAEDTLLPFYLGEKDDASYAIKPTCWPGLDIIPSCLALHRIETELMGKFDEGKLPTDPHLMLRLAIETVAHDYDVIVIDSAPNLGIGTINVVCAADVLIVPTPAELFDYTSALQFFDMLRDLLRNVDLKGFEPDVRILLTKYSNNNGSQSPWMEEQIRDAWGSMVLKNVVRETDEVGKGQIRMRTVFEQAIDQRSSTGAWRNALSIWEPVCNEIFDRLIKPRWEIR
