gi|00000000|ref|AP020319.1|  Staphylococcus aureus KUH180038 plasmid p01KUH180038 DNA, complete 34268, gc%: 29.36%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
7236..7248                         attL                                                                                 N/A                 TTATATATTAAAG
complement(7693..7935)             PHAGE_Salmon_SJ46_NC_031129: RNA ligase 1; KUH180038_p0010; phage(gi100066)          5.74e-06            StaphylococcusaureusMFNNKNGDTLIKDGVPKDYKVADKSGQAITYASRNDVAFVYPKGQSEPIVLVIFTNKDNKSDKPNDKLISETAKSVMKEF
complement(8159..8833)             PHAGE_Staphy_SPbeta_like_NC_029119: integrase core domain protein; KUH180038_p0011; phage(gi985761246)     5.44e-152           StaphylococcusaureusMNYFRYKQFNKDVITVAVGYYLRYALSYRDISEILRERGVNVHHSTVYRWVQEYAPVLYQIWKKKHKKAYYKWRVDETYIKIKGQWCYLYRAIDADGHTLDIWLRKQRDNHSAYAFIKRLIKQFGKPQKVITDQAPSTKVAMAKVIKAFKLKPDCHCTSKYLNNLIEQDHRHIKVRKTRYQSINTAKNTLKGIECIYALYKKNRRSLQIYGFSPCHEIRDMLAS
9235..9250                         attL                                                                                 N/A                 CTGAGAGATAGACGAC
9364..10029                        PHAGE_Staphy_SPbeta_like_NC_029119: integrase core domain protein; KUH180038_p0012; phage(gi985761246)     6.99e-129           StaphylococcusaureusMNYFRYKQFNKDVITVAVGYYLRYALSYRDISEILRERGVNVHHSTVYRWVQEYAPVLYQIWKKKHKKAYYKWRVDETYIKIKGQWCYLYRAIDADGHTLDIWLRKKRDHQSAYAFIKRLIKQFGKPQMIITDQAPSTKVAMAKIIKVFKLKPNCHCTSKYLNNFIEQDHRHIKVRKTRYQSVNTAKNTLKGIECIYGLYKKTVGLFRSTDFHHATKLVIC
10103..10114                       attL                                                                                 N/A                 AAAAAATTCAAA
complement(10602..12041)           PHAGE_Staphy_SPbeta_like_NC_029119: bifunctional AAC/APH; KUH180038_p0013; phage(gi985761240)     0.0                 StaphylococcusaureusMNIVENEICIRTLIDDDFPLMLKWLTDERVLEFYGGRDKKYTLESLKKHYTEPWEDEVFRVIIEYNNVPIGYGQIYKMYDELYTDYHYPKTDEIVYGMDQFIGEPNYWSKGIGTRYIKLIFEFLKKERNANAVILDPHKNNPRAIRAYQKSGFRIIEDLPEHELHEGKKEDCYLMEYRYDDNATNVKAMKYLIEHYFDNFKVDSIEIIGSGYDSVAYLVNNEYIFKTKFSTNKKKGYAKEKAIYNFLNTNLETNVKIPNIEYSYISDELSILGYKEIKGTFLTPEIYSTMSEEEQNLLKRDIASFLRQMHGLDYTDISECTIDNKQNVLEEYILLRETIYNDLTDIEKDYIESFMERLNATTVFEGKKCLCHNDFSCNHLLLDGNNRLTGIIDFGDSGIIDEYCDFIYLLEDSEEEIGTNFGEDILRMYGNIDIEKAKEYQDIVEEYYPIETIVYGIKNIKQEFIENGRKEIYKRTYKD
complement(12042..12488)           PHAGE_Staphy_SPbeta_like_NC_029119: ribosomal-protein-alanine N-acetyltransferase; KUH180038_p0014; phage(gi985761241)     8.84e-94            StaphylococcusaureusMVKTLYSILHRSLDLTEFMEEVLIDDNMVFDIDNLKGFLNDTSSFGFIAKENNKIIGFAYCYTLLRPDGKTMFYLHSIGMLPNYQDKGYGSKLLSFIKEYSKEIGCSEMFLITDKGNPRACHVYEKLGGKNDYKDEIVYVYDYEKGDK
12564..13238                       PHAGE_Staphy_SPbeta_like_NC_029119: integrase core domain protein; KUH180038_p0015; phage(gi985761246)     4.89e-162           StaphylococcusaureusMNYFRYKQFNKDVITVAVGYYLRYALSYRDISEILRERGVNVHHSTVYRWVQEYAPILYQIWKKKHKKAYYKWRIDETYIKIKGKWSYLYRAIDAEGHTLDIWLRKQRDNHSAYAFIKRLIKQFGKPQKVITDQAPSTKVAIAKVIKAFKLKPDCHCTSKYLNNLIEQDHRHIKVRKTRYQSINTAKNTLKGIECIYALYKKNRRSLQIYGFSPCHEIRDMLAS
13379..13798                       PHAGE_Bacill_Gamma_NC_007458: fosfomycin resistance protein; KUH180038_p0016; phage(gi77020174)     7.90e-48            StaphylococcusaureusMIQSINHICYSVSDLKNSIRFYKNILCGELLVSGKTTAYFNIGGLWVALNEEKDIPRNEVQYSYTHVAFTIDESEFNDWYQWFKENDVNILEGRTRDVRDKQSIYFTDPDGHKLELHTGTLENRLNYYKETKPHMVFYK
13810..14256                       PHAGE_Escher_ECBP5_NC_027330: putative acyl-CoA N-acyltransferase domain-containing protein; KUH180038_p0017; phage(gi849119794)     2.57e-07            StaphylococcusaureusMTRYTRLFEEKDFNQINKLLQLYYELGYPTTSKELIHRLSKINNHKDYYILLLIEDEIIIGFSGMCRMMFYENDGNYMRILSFVVNSNFRGNGFGSLLLKESEKLADKLNCKVITLNSGIRTERENAHKFYKANGFESKSYGFSKSIN
14432..15040                       PHAGE_Clostr_vB_CpeS_CP51_NC_021325: putative resolvase; KUH180038_p0018; phage(gi509140089)     1.09e-25            StaphylococcusaureusMIIGYARVSSIDQNLERQLDNLKTFGVEKIFTEKQSGKSVENRPVFQEALNFVRMGDRFVVESIDRLGRDYDEIIETVSYLKEKDVQLMITSLPMMNEVIGNPLLDKFMKDLIVQILAMVSEQERNESKRRQAQGIQVAKEKGVYKGRPLLYSPNAKDPQKRIIYHRVVEMLEEGKAISKIAKEVNITRQTVYRIKHDKGSS
complement(15099..15266)           hypothetical protein; KUH180038_p0019                                                N/A                 StaphylococcusaureusMDLVNNYIYILEIPINIISKLRSLLIKNLNSITTQKESANSHSLFSCIIIKRSFQ
complement(15250..15816)           transcriptional regulator QacR; KUH180038_p0020                                      N/A                 StaphylococcusaureusMNLKDKILGVAKELFIKNGYNATTTGEIVKLSESSKGNLYYHFKTKENLFLEILNIEESKWQEQWKKEQIKCKTNREKFYLYNELSLTTEYYYPLQNAIIEFCTEYYKTNSINEKMNKLENKYIDAYHVIFKEGNLNGEWCINDVNAVSKIAANAVNGIVTFTHEQNINERIKLMNKFSQIFLNGLSK
15857..15868                       attR                                                                                 N/A                 AAAAAATTCAAA
15994..17538                       PHAGE_Mycoba_Enkosi_NC_028936: transporter-like protein; KUH180038_p0021; phage(gi971757643)     2.89e-26            StaphylococcusaureusMISFFTKTTDMMTSKKRWTALVVLAVSLFVVTMDMTILIMALPELVRELEPSGTQQLWIVDIYSLVLAGFIIPLSAFADKWGRKKALLTGFALFGLVSLAIFFAESAEFVIAIRFLLGIAGALIMPTTLSMIRVIFENPKERATALAVWSIVSSIGAVFGPIIGGALLEQFSWHSAFLINVPFVIIAVVAGLFLLPESKLSKEKSHSWDIPSTILSIAGMIGLVWSIKEFSKEGLADIIPWVVIVLAITMIVIFVKRNLSSSDPMLDVRLFKKRSFSAGTIAAFMTMFAMTSVLLLASQWLQVVEELSPFKAGLYLLPMEIGAMVFAPIAPGLAARFGPKIVLPSGIGIAAIGMFIMYFFGHPLSYSTMALALILVGAGTASLAVASALIMLETPTSKAGNAAAVEESMYDLGNVFGVAVLGSLSSMLYRVFLDISSFSSKGIVGDLAHVAEESVVGAVEVAKATGIKQLANEAVTSFNDAFVATALVGGIIMIIISIVVYLLIPKSLDITKQK
complement(17650..18153)           PHAGE_Salmon_SJ46_NC_031129: RNA ligase 1; KUH180038_p0022; phage(gi100066)          9.91e-24            StaphylococcusaureusMKKLIFLIVIALVLSACNSNSSHAKELNDLEKKYNAHIGVYALDTKSGKEVKFNSDKRFAYASTSKAINSAILLEQVPYNKLNKKVHINKDDIVAYSPILEKYVGKDITLKELIEASMTYSDNTANNKIIKEIGGIKKVKQRLKELGDKGFCCKVKNHVIFILKNEK
32563..32578                       attR                                                                                 N/A                 CTGAGAGATAGACGAC
32637..32649                       attR                                                                                 N/A                 TTATATATTAAAG
