gi|00000000|ref|AP022583.1|  Mycobacterium noviomagense JCM 16367 DNA, complete genome. 4779798, gc%: 65.76%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
1853842..1854903                   PHAGE_Clostr_phiCDHM11_NC_029001: putative ParA protein; MNVI_17120; phage(gi971764696)     1.67e-14            MycobacteriumnoviomagenseMWRELLESARNRGGSTSGASASTSLTHAEKAVGVSAPYGPASSAPHPPQQTPDVSRETSGEYDTPIGAAAERAMQILHTTHGRLPRPAQRRLFTIANQKGGVGKTTTAVNLAAALAIQGLKTLVIDLDPQGNASTALGITDRHSGTPSSYEVLLGDIPLHEALRRSPHSERLFCVPATIDLAGAEIELVSMVARENRLRTALADLDNSDFDYVFIDCPPSLGLLTINALVAAPEVLIPIQCEYYALEGVSQLMNNIEMVKAHLNPRLEVTTVILTMYDGRTKLADQVADEVRRYFGGKVLRTVIPRSVKVSEAPGYSMTIIDYDPGSRGAMSYLDASRELAQRDQPPAGEGRA
1854900..1855883                   PHAGE_Agroba_7_7_1_NC_019519: hypothetical protein; MNVI_17130; phage(gi435844368)     1.00e-09            MycobacteriumnoviomagenseMNQPSRKRGGLGRGLASLIPTSPPDGSADTSLGPRMGDAAADVVLGGNAPVNGNAVGAVYREIDPALIEPNPRQPRQSFDEEALAELVHSIREFGLMQPIVVRALDGPQNGTRYQIVMGERRWRAAQQAGMTAIPAIVRETGDDNMLRDALLENIHRVQLNPLEEAAAYQQLLDEFGVTHDELAARIGRSRPLITNMIRLLRLPIAVQRRVAAGVLSAGHARALLALEGGPEAQEELAARIVAEGLSVRATEEAVTLANRGDGPAPAQPRRKPIQMPGLQDVAERLSGALDTRVTVSLGKRKGKIVVEFGSVDDLQRIVGLMDAAQA
1856313..1857041                   hypothetical protein; MNVI_17140                                                     N/A                 MycobacteriumnoviomagenseMSARITPLRLEAFEQLPKHARRCVYWELDPAALHADDHLPDPEFEKEAWLSMVMLEWGSCGQVATAEPAESGNSEPPCLGYVLYAPPRVVPRAQHFPTAPVSADAVLLTSMGLEPQAAEDLRHSLIARVVDELVRRGVRALEAFGRTEAVSELQDRRTAEPEIRPVLAAVGDCSVDHCVIDADFLQTAGFVVVAPHRYFPRLRLELDKGLGWKAEVEAALERLLENAQLQQPVGAGSSATSR
complement(1857028..1858248)       PHAGE_Bacill_PBS1_NC_043027: hypothetical protein; MNVI_17150; phage(gi100165)       3.00e-12            MycobacteriumnoviomagenseMSNPHRGVGDELRCGDRSAAVTEIRATLASLGYLEGPEADLTTGRQVALDVFDAELDQAVRAFQQQRGLLVDGIVGEATYRALKEASYRLGARTLFHQFGAPMYGDDVATLQARLQDLGFYTGLVDGYFGLQTHNALMSYQREYGLYADGICGPETLRSLDFLASRVTGGSPHAIREEELVRRSGPKLSGKRIIIDPGRGGADHGLITQGPAGPISEADILWDLASRLEGRMTAIGMETFLSRPPNHSPTDAERAATANAVGADLMISLRCASLASPSANGVASFHFGNSHGSVSTIGRMLADFIQREVVARTGLRDCRIHGRTWDLLRLTRMPTVQVDIGYITNPHDRAKLVTPHARDAIAEGILAAVKRLYLLGKNDRPTGTFTFAELLAHELAVEQASRVTGS
complement(1858384..1858611)       PHAGE_Dinoro_DFL12phi1_NC_024367: putative host-like protein; MNVI_17160; phage(gi658311036)     3.03e-05            MycobacteriumnoviomagenseMVAPVLEEIAAEKAGQLTVAKLDVDANPQTARDFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVVPSPQ
complement(1858728..1859729)       PHAGE_Bacill_G_NC_023719: gp344; MNVI_17170; phage(gi593777800)                      6.75e-77            MycobacteriumnoviomagenseMTAPTTVHDVIIIGSGPAGYTAAIYAARAQLAPLVFEGTSFGGALMTTTDVENYPGFRSGITGPELMDEMREQAQRFGADLRMEDVESVSLDGPIKSVVTAEGQTYHARAVILAMGAAARYLHVPGEQELLGRGVSSCATCDGFFFRDQDIAVIGGGDSAMEEATFLTRFARSVTIVHRRDEFRASKIMLNRARSNDKIRFVTNHVVVAVEGDGTVTGLRLRNTITSEESQLSVTGVFVAIGHDPRSELVRDAVDVDQDGYVLVRQPTTSTSVDGVFAAGDLVDRSYRQAVTAAGTGCAAAIDAERWLAEHAGSGGDTETEAGTDTDLIGVPR
complement(1859816..1860580)       anti-sigma-M factor RsmA; MNVI_17180                                                 N/A                 MycobacteriumnoviomagenseMADADNDPAQDGDEAADPPLTVEQLADLQAGLLDDDEAARVRNQIRADPAAQEALRALNHVRRDLATLGADSQSAPDTPPPVVARITAALRSATDPARPPGAAHALRPHSRPTRKVAAAAGVSAAFAAIGVGTVALLHSPPPTPSAPSTAEHITVSRPPATIPLSAPEILGLLQSRPDYGPLSDPSRRASCLTGLGYSASTEVLGARPVEVSGRAAVLLVLPGNTPDRLTALAVAANCSAADTGLLADTTLARP
complement(1860679..1861275)       PHAGE_Sinorh_phiM9_NC_028676: DNA-directed RNA polymerase specialized sigma subunit; MNVI_17190; phage(gi966199376)     4.26e-10            MycobacteriumnoviomagenseMGLGGQVRQQRSDAELLAAHVAGDRHAFAELFGRHHRQLHRLARLTSRTQEDAEDALQDAMLSAHRGAGSFRHDAAVSSWLYRIVVNACLDRLRRSKAHPTAPLDDVHPVPDRTAQVETAIAVQRALMRLPVEQRAAVVAVDMQGYSIADTARMLGVAEGTVKSRCARARARLAALLGYLATDLAAEPASDSVRRLAR

#### region 2 ####
2819002..2820114                   PHAGE_Mycoba_Pukovnik_NC_011023: gp62; MNVI_26560; phage(gi192824238)                1.05e-05            MycobacteriumnoviomagenseMSGDDEGHARKAQWLAGAAGLGAVSTIAAVSVARSMMQRAGIDDPYAGENFEALDSDRSYVVTTPDGIPLAVREAGPVDAPLTVVFAHGFCLRMAAFHFQRMRLGDEWGPQVRMIFYDQRGHGRSGEAPPESYTVAQLGRDLETVLQVIAPRGPVVLVGHSMGGMTVLSHARQYPHYYGDRIVGAALISSAAEGVSRSLLGEILKNPALEAVRFTARSAPKLVHRGRRAARSLIKPILVAASYGDEKISPSVVAFSQKMMYGTPVTTMVEFLHALETLDETEALPTLAQIPTLIACGDRDMLTPAEYSREMAGALPDSELLIVEGAGHLVQLEKPEVVNEGLVRLVKRVNPPSRLKSFTRRWRERARRNG
2820089..2820571                   tRNA threonylcarbamoyladenosine biosynthesis protein TsaE; MNVI_26570                N/A                 MycobacteriumnoviomagenseMSEPAAMVELGSGTATLASVEDTVALGSRLGQQLRAGDVVVLSGPLGAGKTVLAKGIAAALDVDGPVISPTFVLARVHRARRAGAPAMIHVDMYRLLDHSGADLLAELDSLDLDTELDEAIVVVEWGEGLAERLSERHLDIRLERVSNSDVRIATWRWAA
2820568..2821212                   PROPHAGE_Escher_MG1655: protease specific for Gcp(YgjD), essential for nucleoid maintanence; MNVI_26580; phage(gi16129761)     5.93e-13            MycobacteriumnoviomagenseMTGLLVLALDTATPAVTAGVVRRVGERLEVLARQVTVDSRAHAERLTPNVLAALADAGIGMTDLDAVVVGCGPGPFTGLRVGMATAAAYGHALGIPVRGVCSLDAIGVQTSGDTLVVTDARRREIYWARYRDGVRVDGPAVNAPADVDPGTAQAVAGSPEHAALFDLPRCEPVYPTPGGLVRAVADWSEPPAPLLPLYLRRPDAKALAPQVVSR
2821209..2821676                   PHAGE_Salmon_SPN3US_NC_027402: putative GCN5-related N-acetyltransferase; MNVI_26590; phage(gi849122638)     5.35e-05            MycobacteriumnoviomagenseMTAHDAEPITVDALTIADAERCAQLEAELFPGDDPWSVAAFARELAAKHNHYVAARRADTLVGYGGIARLGRKPPFEYEVHTIGVDPAYQGRGIGRRLLNELLRFADGPVYLEVRTDNEAAIALYRSVGFINVGLRRRYYRVSGADAYTMRRDPQ
2821673..2822698                   PROPHAGE_Escher_MG1655: glycation-binding protein, predicted protease/chaperone; essential for genome maintenance; MNVI_26600; phage(gi16130960)     6.34e-76            MycobacteriumnoviomagenseMTVVVAIETSCDETGVGIARLDDDGTVTLLADEVASSVDEHVRFGGVVPEIASRAHLEALGPTMRRALAASGVSKPDVVAATIGPGLAGALMVGVAAAKAYSAAWAVPFYAVNHLGGHLAADVYEHGPLPECVALLVSGGHTHLLHVRSLGEPIVELGSTVDDAAGEAYDKVARLLGLGYPGGKVLDDLARTGDRNAIVFPRGMTGPNDDRHAFSFSGLKTAVARYVESHPDVATADIAAGFQEAVADVLTMKAVRAATELGVSTLLIAGGVAANSRLRELAEQRCREAGLTLRIPRPRLCTDNGAMIASFAAHLVAAGASPSPLDVPSDPGLPVIRGQLP
complement(2822716..2823375)       hypothetical protein; MNVI_26610                                                     N/A                 MycobacteriumnoviomagenseMFRGIFHATRIAGVAMLFFLAAAGFAGVGSGLAEADPNGQMYGDPQAAAPYWRYQHGQDCGLMSAADVIGQLTGKEPSETAVVLRGVFTKSQVHHGDIYHFDGTSPQDLVVLLGKYGIQSNLTTGNTMQTLEQDLAGGHKVIAGVNAETIWNYPPGQGQRTNADHAVVVTGVDTRSDIVHLNDSGTPNGRDEQIPMDTFSQAWATGDNLLIVTQQTSGR
2823707..2824009                   PHAGE_Shewan_1/44_NC_025463: co-chaperonin; MNVI_26620; phage(gi712915949)           1.67e-05            MycobacteriumnoviomagenseMASVNIKPLEDKILVQTIEAETTTASGLVIPDTAKEKPQEGKVVAVGPGRWDEEGEKRIPLDVSEGDTVIFSKYGGTEIKYNGEEYLILSARDVLAIVNK
2824098..2825714                   PHAGE_Cellul_phi14:2_NC_021806: chaperonin GroEL; MNVI_26630; phage(gi526178751)     1.52e-92            MycobacteriumnoviomagenseMSKLLEYDETARRAMETGVDKLADAVRVTLGPRGRHVVLAKAFGGPAVTNDGVTVAREIDLEDPFENLGAQLVKSVATKTNDVAGDGTTTATVLAQALIRGGLRLVAAGANPIALGLGISKAADAVSEALLAAATPVSDKNAIAQVATVSSRDEQIGELVGEAMTKVGHDGVVSVEESSTLSTELEFTEGVGFDKGFISAYFVTDFDAQEAVLEDALILLHREKISSLPDLLPLLEKVAEAGKPLLVIAEDVEGEALSTLVVNAIRKTLKAVAVKAPYFGDRRKAFLQDLAVVTGGQVVDPDVGLLLREAGLEVLGSARRVVVSKDDTVIVDGGGTHEAIAERAKQLRAEIETTDSDWDREKLEERLAKLAGGVAVIKVGAATETALKERKESVEDAVAAAKAAVEEGIVAGGGTALLHARKALAELRGSLSGDEALGVDVFSEALSAPLYWIAANAGLDGSVVVNKVSELPEGHGLNAETLTYGDLAAEGVVDPVKVTRSAVLNAASVARMVLTTETAVVEKPAAEEDEHAGHGHAH
2826066..2826272                   hypothetical protein; MNVI_26640                                                     N/A                 MycobacteriumnoviomagenseMTGSGPVWTGVAVVGGAVALAFFLRAAKAARVVACILLAISLANAFYIENELSKKRDEITHTFDHLGS
complement(2826338..2826799)       hypothetical protein; MNVI_26650                                                     N/A                 MycobacteriumnoviomagenseMNLTVLLADSAQIDASNKVSALGMGWTHTTAPSPPMAVVGFVEMEQSDLPFILGIRMELRDADDTLVTMETPEGPRPVVIEVQAQGNPLDESRAGEPVLVPIAAQFGAGMFTKPGVYAIHVTATREKDGESVHGIRDFLVLPPDTGSDAGAKD
complement(2826808..2827131)       hypothetical protein; MNVI_26660                                                     N/A                 MycobacteriumnoviomagenseMRRLQIDINRRNRAGQTLTSYVGPTPAIGERVVVFEPEDGVCADAVVAAVNPNRCLVALDVDWDSMRDDVLMRHVTTLTGSALRAVVPVGVPTGGATKGVAVLVDNC
complement(2827128..2827535)       hypothetical protein; MNVI_26670                                                     N/A                 MycobacteriumnoviomagenseMPKDGRLLIVRFSPFTAEGCTKNAQDTFDDDLDEGRPGRYGLSTSGIIVPTAESVDDAIIRLRSIVPLRGRHIAPVWADDLEHSGWVVVPDMPPAAHYLVGKGDLSDMPDFTDLALIWADAKRVCPTYRRGGDQR
2827983..2829491                   PHAGE_Pelagi_HTVC008M_NC_020484: adenylate/guanylyl cyclase; MNVI_26680; phage(gi460042455)     1.66e-22            MycobacteriumnoviomagenseMDRIWQWAWDRHGGRYSWAICAVAAPVGLPIYVVWSLLIVAVEQSSDYLAAAAVTVAAVPVLAYVVVRPGSGPSRLVEQWAAGHEVDRVGALEATYAWTRAAVVQGLVSAAVWVGLLSVMVGAIAGATGWRLAQYGILGAVIGVAVLLPGVHSIAEAVARTVRLAIAGDTGVGDSLPRARPTFAAWSSMSMLAVVFVFAVYGAMVTAVFDRARAEPVLFVAIGCVLTVGLGLPLTVGTALSASLRPIRDLDEGTERVAAGDFSQRLPVVQDDDLGVLTASFNRMQAGLAERQRLQAAFGTYVDPALAARLLQQGDDVFKGERRQVTVMFVDIRDFTPFAEANTAEDTVARLNALFEIVVPAVVEAGGHVNKFLGDGALAVFGAPNDLVRHADSAVSAAVLVHSLVAERFGGALRIGIGINTGVVIAGTIGGGSKLEFTLIGDTVNVVARVEQLTKTTGDTILLTNQTLDALDPPPPGLVDRGCHELKGKSAAVRVFGLAPAA

#### region 3 ####
complement(3208280..3209758)       PHAGE_Mycoba_Adler_NC_023591: hypothetical protein; MNVI_30520; phage(gi589892209)     2.02e-13            MycobacteriumnoviomagenseMATISTPHYLLDQAKRRFTPSITNFPGMGAVERRLLRTEFPQKKLADPPPGSGLKPVMGDAGLPILGHMIEMMRGGPDYLLHLYNTKGPVVYGDSPWLPAVAALGPDAIQTIYSNRNKDYSQQGWVPVIGPFFRRGLMLLDFDEHLFHRRIMQEAFVRSRLVSYVEQMDKVVSQVVANDWVANDARFLLYPAMKELTLDIASMVFMGHEPGTDKELVTKVNKAFTITTRAGNAIIRTSVPPFTWWRGLKARELLENYFRERVKEQRGKNGNDLLSVLCQTEDEDGNKFSDEDIVNHMIFLMMAAHDTSTSTATTMAYHLAAHPEWQDRCRDESDRLGDAPLHIEALEKLESLDLVMNESIRIVTPVQWAMRRTVRDTELVGYYLPKGTNVIAYPGMNHRLPEIWTDSLKFDPDRFTEPRNEHKRHRYAFTPFGGGAHKCIGMVFGQLEIKTILHRLLRQYRLELPGPGYKAKWDYGGMPIPMDGMPIVLRPL
3209867..3210532                   TetR family transcriptional regulator; MNVI_30530                                    N/A                 MycobacteriumnoviomagenseMSTQQDSRAAGSRNRGASTPQRRGDKQRQAILQAVRELLEEKPFAELSVSTISDRAGVARSGFYFYFDSKYAVLAQILAEATHELEELTHYFAPRGPDESPAAFAKRMVGSAAAVYANNDPVMSACNAARNTDAEIREILDQQVDSVIAQIIGVVEEEIKAGTAHPISDDIPALVRTLAATTALMLSGDATFLGPDRDVQRGIRVLEQLWLNALWGGPAGD
3210558..3211427                   PHAGE_Prochl_P_TIM68_NC_028955: hypothetical protein; MNVI_30540; phage(gi971760361)     2.54e-05            MycobacteriumnoviomagenseMAQTEPRGYFGGKRCFLTGAASGIGRATALRLAAQGAELYLTDRNAEGLAETVADARALGAQVPEHRSLDVADYHEVASFAADIHTRHPSMDLVMNIAGVSAWGTVDQLSHEQWSKLVAINLMGPIHVIESFIPPMMAAGRGGHLVNVSSAAGLVALPWHAAYSASKYGLRGLSEVLRFDLARHRIGVSVVVPGAVNTPLVNTVEIAGVDRDDPRVKRWVDRFSGHAVTPEKAAEKILAGVAKNRFLIYTSADIRALYMFKRMAWWPYSVAMRQVNVVFTRALRPSAAP
complement(3211520..3212557)       PHAGE_Cronob_ENT39118_NC_019934: DNA polymerase; MNVI_30550; phage(gi431811050)      2.05e-26            MycobacteriumnoviomagenseMSTGWVLHVDLDQFLAAVELRRHPDLAGLPVIVGGSGDPNEPRKVVTCASYEAREFGVHAGMPLRTAARRCPDATFLPSDPAAYDAASDQVMELLRDLGYPVEVWGWDEAYVGVPAGTDAVDVAEQIRTVIAAETGLSCSVGISDNKQRAKVATGFAKPAGIYQLTDANWMAVMADRPVDALWGVGPKTAKKLAGLGITTIGQLANTHAELLTSTFGPRIGLWLLLLAKGGGDTDVSAEPWVPRSRSHVVTFPRDITARAEMDSVVTELARQALADVVAQSRIVTRVAVTVRTSTFYTRTKIRKLDAPTTDADIIVAAALRVLDLFELDRPVRLLGVRLELQMPP
complement(3212554..3213159)       TetR family transcriptional regulator; MNVI_30560                                    N/A                 MycobacteriumnoviomagenseMRLVDHTRELPVSAPQERGDAARNRTLLLDAARRLIAERGADAVTMDDIAAAAGVGKGTVFRRFGSRARLMMVLLDEDERRLQEAFLFGPPPLGPDAPPLDRLLAFGRERQRFVHTHHALLSAASRDPQTRHNAPAMLLLYTHVRMLLASAQSTGDLDAQTDALLALLDADYVEHQLNDRGHTVASLGDAWESLARKLCGR
3213245..3213799                   NAD(P)H-dependent oxidoreductase; MNVI_30570                                         N/A                 MycobacteriumnoviomagenseMSDRKSDIKVLALVGSLRAASVNRQIAQLASEVAPEGVTVTVFDGLGELPFYNEDIDNADVPASVTALRAAAADADAALVVTPEYNGSIPGVMKNAIDWLSRPLGNSALKDKPLAVIGGSLGRYGGVWAHDETRKSFGIAGPRVVEAIKLSVPFQSLDGKHPRENAELVSNVRDVVGKLAAEVS
3214267..3214506                   PHAGE_Mycoba_Adler_NC_023591: glutaredoxin-like protein NrdH; MNVI_30580; phage(gi589892251)     1.01e-30            MycobacteriumnoviomagenseMTITVYTKPACVQCNATYKALDKQGIAYQTVDITLDSEARDYVMALGYLQAPVVVAGNEHWSGFRPDRIKALAGAALTA
3214517..3214966                   PHAGE_Bacill_Mgbh1_NC_041879: ribonucleotide reductase A subunit; MNVI_30590; phage(gi100062)     5.93e-17            MycobacteriumnoviomagenseMPSSSLVYFSSVSENTHRFVQKLGIPATRIPLHGRIEVDQPYVLVLPTYGGGRATPNINDGGYVPKQVIAFLNNEHNRALLRGVIAAGNTNFGAEFCYAGEVVSRKCGVPYLYRFELMGTDEDVQAVRAGLADFWKDETCHRLSQLQSL
3214933..3217104                   PHAGE_Lactoc_phiL47_NC_023574: ribonucleotide-diphosphate reductase subunit alpha; MNVI_30600; phage(gi589890883)     0.0                 MycobacteriumnoviomagenseMSPTLTAAEPVAAAGRSPAQGETDYHALNAMLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNYDEKLDYLIRENYYEREVLDQYSRNFVKSLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVCMVALTLAAGDTALAEKLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRIEDNMESIGRAINSALQLSKRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDSFSYANQLGARQGAGAVYLHAHHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNEDMYLFSPYDVERVYGVPFADISVTEKYYEMVDNPRIRKSKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIEGKITHSNLCSEILQVSTPSYFNDDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRALTAVSDQTHIYSVPSIEKGNNESHAIGLGQMNLHGYLARERIFYGSEEGIDFTNIYFYTVLYHALRASNRIAIERGTHFKGFERSKYATGEFFDKYTDQVWEPKTPKVRQLFADAGIRIPTQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVYYPAPYMTNDNLEYYQDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQIYAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML
