gi|00000000|ref|AP023034.1|  Staphylococcus aureus TPS3156 DNA, complete genome. 2852412, gc%: 32.82%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
1525605..1525616                   attL                                                                                 N/A                 TAATTTCGCCTT
complement(1526690..1526875)       PHAGE_Staphy_Pvl108_NC_008689: hypothetical protein; USA300LVJ_13820; phage(gi119443711)     9.26e-38            StaphylococcusaureusMFILNTQAHARLDQMAQQFEVVCNGLNENEGQAIQTMDQSASLIRSNLIQVKEQLEKLAVY
1527004..1527024                   attL                                                                                 N/A                 AATCCGCCCTTTTTTTGCCCT
complement(1527124..1528101)       PHAGE_Staphy_phi2958PVL_NC_011344: Panton-Valentine leukocidin chain F precursor; USA300LVJ_13830; phage(gi209363612)     0.0                 StaphylococcusaureusMKKIVKSSVVTSIALLLLSNTVDAAQHITPVSEKKVDDKITLYKTTATSDSDKLKISQILTFNFIKDKSYDKDTLILKAAGNIYSGYTKPNPKDTISSQFYWGSKYNISINSDSNDSVNVVDYAPKNQNEEFQVQQTVGYSYGGDINISNGLSGGGNGSKSFSETINYKQESYRTSLDKRTNFKKIGWDVEAHKIMNNGWGPYGRDSYHSTYGNEMFLGSRQSNLNAGQNFLEYHKMPVLSRGNFNPEFIGVLSRKQNAAKKSKITVTYQREMDRYTNFWNQLHWIGNNYKDENRATHTSIYEVDWENHTVKLIDTQSKEKNPMS
complement(1528103..1529041)       PHAGE_Staphy_tp310_1_NC_009761: Panton-Valentine leukocidin chain S precursor; USA300LVJ_13840; phage(gi156603947)     0.0                 StaphylococcusaureusMVKKRLLAATLSLGIITPIATSFHESKADNNIENIGDGAEVVKRTEDTSSDKWGVTQNIQFDFVKDKKYNKDALILKMQGFINSKTTYYNYKNTDHIKAMRWPFQYNIGLKTNDPNVDLINYLPKNKIDSVNVSQTLGYNIGGNFNSGPSTGGNGSFNYSKTISYNQQNYISEVERQNSKSVQWGIKANSFITSLGKMSGHDPNLFVGYKPYSQNPRDYFVPDNELPPLVHSGFNPSFIATVSHEKGSGDTSEFEITYGRNMDVTHATRRTTHYGNSYLEGSRIHNAFVNRNYTVKYEVNWKTHEIKVKGHN
1529218..1529229                   attL                                                                                 N/A                 TATATTTTGATT
complement(1529431..1530885)       PHAGE_Staphy_SMSAP5_NC_019513: putative amidase; USA300LVJ_13850; phage(gi422935803)     0.0                 StaphylococcusaureusMLITKNQAEKWFDNSLGKQFNPDLFYGFQCYDYANMFFMLATGERLQGLYAYNIPFDNKAKIEKYGQIIKNYDSFLPQKLDIVVFPSKYGGGAGHVEIVESANLNTFTSFGQNWNGKGWTNGVAQPGWGPETVTRHVHYYDNPMYFIRLNFPNNLSVGNKAKGIIKQATTKKEAVIKPKKIMLVAGHGYNDPGAVGNGTNERDFIRKYITPNIAKYLRHAGHEVALYGGSSQSQDMYQDTAYGVNVGNKKDYGLYWVKSQGYDIVLEIHLDAAGESASGGHVIISSQFNADTIDKSIQDVIKNNLGQIRGVTPRNDLLNVNVSAEININYRLSELGFITNKNDMDWIKKNYDLYSKLIAGAIHGKPIGGVVASEVKAPVKNEKNPPVPAGYTLDKNNVPYKKEQGNYTVANVKGNNVRDGYSTNSRITGVLPNNTTITYDGAYCINGYRWITYIANSGQRRYIATGEVDIAGNRISSFGKFSAV
complement(1530896..1531198)       PHAGE_Staphy_SMSAP5_NC_019513: holin; USA300LVJ_13860; phage(gi422935838)            6.69e-68            StaphylococcusaureusMDAKVITRYIVLILALVNQFLANKGISPIPVDEESVSSIILTVVALYTTYKDNPTSQEGKWANQKLKKYKAESKYRKATGQAPIKEVMTPTNMNDTNDLG
complement(1531334..1531633)       PHAGE_Staphy_80_NC_030652: recombination endonuclease subunit; USA300LVJ_13870; phage(gi100054)     1.75e-64            StaphylococcusaureusMFGFTKRHEQDWRLTRLEENDKTMFEKFDRIEDSLRTQEKIYDKLDRNFEELRRDKEEDEKNKEKNAKNIRDIKMWILGLIGTILSTFVIALLKTIFGI
complement(1531679..1531843)       PHAGE_Staphy_phi2958PVL_NC_011344: hypothetical protein; USA300LVJ_13880; phage(gi209363606)     9.46e-32            StaphylococcusaureusMLKLISPTFEDIKTWYQLKEYSKEDIAWYVDMEVIDKEEYAIITGEKYPENLES
complement(1531836..1532225)       PHAGE_Staphy_SMSAP5_NC_019513: hypothetical protein; USA300LVJ_13890; phage(gi422935825)     2.93e-89            StaphylococcusaureusMQILVNKRNEIISYAIIGGFEEGIDIENLPENFSQVFRPKAFKYSNGEIVFNEDYSEEKDDLHQQIDSEEQNTVASDDILRKMVASMQKQVVQSTKLSMQVNKQNALMAKQLVTLNKKLEEVKGETENA
complement(1532225..1533691)       PHAGE_Staphy_SMSAP5_NC_019513: hypothetical protein; USA300LVJ_13900; phage(gi422935802)     0.0                 StaphylococcusaureusMSNLEKSVAINLENTAHYENISNLDITFRTGESDSSVLLFNIIKNNQPLLLSEENIKARIAIRGKGVMVVAPLEILDPFKGILKFQLPNDVIKRDGSYQAQVSVAELGNSDVVVVERTITFNVEKSLFSKIPSETKLHYIVEFQELEKTIMDRAKAMDEAIKNGEDYASLIEKAKEKGLSDIQIAKSSSIDELKQLANSRISDLENKAQAYSRTFDEQKRYMDEKHEAFKQSVNSGGLVTSGSTSNWQKAKITKDDGKIMQITGFDFNNPEQRIGDSTQFIYVSQAINYPRDVSTNGTVEYLVVTSDYKRMTYRPNGTNKVFVKRKEAGSWSEWSELAINDYNTPFETVQSAQSKANMAESNAKLYADDKFNKRYSVIFDGTANGVGSTLYLNESLDQFILLIFYGTFPGGDFTEFGSPFGGGKISLNPSNLPDGDGNGGGVYEFGLTKSSRTSLTISNDVYFDLGSQRGSGANANRGTINKIIGVRK
complement(1533691..1535601)       PHAGE_Staphy_SMSAP5_NC_019513: minor structural protein; USA300LVJ_13910; phage(gi422935800)     0.0                 StaphylococcusaureusMENLYLIKDLGALAGRDYRAKEIQNLQRIEQFALGLTTEFKLHQKAKTMQHFAEQIYYNGRSQAAVNKSLQSQINALVVAPRNNSANEIVQARVNVNGETFDTLKEHLDDWETKTQINKEETIRELNKTKQEILDIEYRFEPDKQEFLFVTELAPLTNAVMQSFWFDNRTGIVYMTQARNNGYMLSRLRPNGQFIDSSLIVGGGHGTHNGYRYIDDELWIYSFILNGNNENTLVRFKYTPNVEISYGKYGMQDVFTGHPEKPYITPVINEKENKILYRIERPRSQWELENSMNYIEIRSLDDVDKNIDKVLHKISIPMRLTNETQPMQGVTFDEKYLYWYTGDSNPNNRNYLTAFDLETGEEAYQVNADYGGTLDSFPGEFAEAEGLQIYYDKDSGKKALMLGVTVGGDGNRTHRIFMIGQRGILEILHSRGVPFIMSDTGGRVKPLPMRPDKLKNLGMLTEPGLYYLYTDHTVQIDDFPLPREWRDAGWFLEVKPPQTGGDVIQILTRNSYARNMMTFERVLSGRTGDISDWNYVPKNSGKWERVPSFITKMSDINIVGMSFYLTTDDTKRFTDFPTERKGVAGWNLYVEASNTGGFVHRLVRNSVTASAEILLKNYDSKTSSGPWTLHEGRIIS
complement(1535617..1535907)       PHAGE_Staphy_phi2958PVL_NC_011344: hypothetical protein; USA300LVJ_13920; phage(gi209363602)     9.12e-64            StaphylococcusaureusMATEEVKIKALLENDKQYFPATHWKAINGIPYAGSSDIDGLPQDGIISVDDKNKLDKLKIGEAGIIQNSIVQKSPNGKLWKITVDDSGKLGTVLFY
complement(1535907..1537490)       PHAGE_Staphy_SMSAP5_NC_019513: prophage endopeptidase tail family protein; USA300LVJ_13930; phage(gi422935801)     0.0                 StaphylococcusaureusMDYHDHLSVMDFNELICENLLDVDYGSFKEYYELNEARYITFTVYRTTHNSFVFDLLICENFIIYHGEKYTIKQTAPKVEGDKVFIEVTAYHIMYEFQNHSVESNKLDDDSSETGKTPEYSLDEYLRYGFANQKTSVKMTYKIIGDFKRKVPIDELGNKNGLEYCKEAVDLFGCIIYPNDTEIGFYSPETFYQRSEKVIRYQYNTDTVSATVSTLELRTAIKVFGKKYTAEEKKNYNPIRTTDIKYSNGFIKEGTYRTETIGSKATINFDCKYGNETVRFTIKKDSQGGIYKLILDGKQIKQISCFAKSVQSETIDLIKNIDKGKHVLEMIFLGEDPKNRIDISSNKKAKPCMYVGTEKSTVLNLIADNSGRNQYKAIVDYVADSAKQFGIRYANTQTNEDIETQDKLLEFAKKQINDTPKTELDVNYIGYEKIEPRDSVFFVHELMGYNTELKVVKLDRSHPFVNAIDEVSFSNEIKDMVQIQQALNRRVIAQDNRYNYQANRINHLYTSTLNSPFETMDIGSVLI
complement(1537499..1538323)       PHAGE_Staphy_StauST398_2_NC_021323: phage tail tape measure protein-like protein; USA300LVJ_13940; phage(gi509139928)     0.0                 StaphylococcusaureusMQSFVKIIDGYKEEVITDFNQLIFLDARAESPNTNDNSVTINGVDGILPGAISFAPFSLVLRFGYDGIDVIDLNLFEHWFRSVFNRRHPYYVITSQMPGVKYAVNTANVTSNLKDGSSTEIEVSLNVYKGYSESVNWTDSEFLFDSNWMFENGIPLDFTPKYTHTSNQFTIWNGSTDTINPRFKHDLKILINLNASGGFELVNYTTGDIFKYNKSIDKNTDFVLDGVYAYRDINRVGIDTNRGIITLAPGKNEFKIKGDVSDIKTTFKFPFIYR
complement(1538323..1541247)       PHAGE_Staphy_SMSAP5_NC_019513: phage tail tape measure protein; USA300LVJ_13950; phage(gi422935797)     0.0                 StaphylococcusaureusMDKQYEDDVIAIKNNVNLSKSEKDKLLAIADQRHKDEVRKAKSKKDAVVDVVKKQNKDIDKEMDLSSGRVYKNTEKWWNGLKSWWSNFREDQKKKSDKYAKEQEETARRNRENIKKWFGNAWDGVKSKTGEAFSKMGRNANHFGGEMKKMWSGIKGIPSKLSSGWSSAKSSVGYHTKAIANSTGKWFGKAWQSVKSTTGSIYNQTKQKYSDASDKAWAHSKSIWRGTSKWFSNAYKSAKGWLTDMANKSRAKWDNISSTAWSNAKSVWKGTSKWFSNSYKSLKDWTGDMYSRAHDRFDAISSSAWSNAKSVFNGFRKWLSKTYDWIRDIGKDMGRAAADLGKNVANKAIGGLNSMIGGINKISKAITDKNLIKPIPTLSTGTLAGKGVATDNSGALTQPTFAVLNDRGSGNAPGGGVQEVIHRADGTFHAPQGRDVVVPLGVGDSVINANDTLKLQRMGVLPKFHGGTKKKDWLDQLKGNIGKKAGEFGATAKNTAHNIKKGAEEMVEAAGDKIKDGASWLGDKIGDVWDYVQHPGKLVNKVMSGLNINFGGGANATVKIAKGAYSLLKKKLVDKVKSWFEDFGGGGDGSYLFEYPIWQRFGRYTGGLNFNGGRHYGIDFGMPSGTNVYAVKGGIADKVWTDYGGGNSIQIKTGANEWNWYMHLSKQLARQGQRIKAGQLIGKSGATGNFVRGAHLHFQLMQGSHPGNDTAKDPEKWLKSLKGSGVRSGSGVNKAASAWAGDIRRAAKRMGVNVTSGDVGNIISLIQHESGGNAGITQSSALRDINVLQGNPAKGLLQYIPQTFRHYAVRGHNNIYSGYDQLLAFFNNRYWRSQFNPRGGWSPSGPRRYANGGLITKHQLAEVGEGDKQEMVIPLTRRKRAIQLTEQVMRIIGMDGKPNNITVNNDTSTVEKLLKQIVMLSDKGNKLTDALIQTVSSQDNNLGSNDAIRGLEKILSKQSGHRANANNYMGGLTN
complement(1541211..1541681)       PHAGE_Staphy_SMSAP5_NC_019513: phage tail tape measure protein; USA300LVJ_13960; phage(gi422935797)     5.87e-85            StaphylococcusaureusMKIETDLSNNLIAEIEKRNKKELEKTQELIDKYSAFDEQEKQNILTRTKEKNDLRIKKEQELNQKIKELKEKALSDGQISENERKEIEKLENQRRDITVKELSKTEKEQERILVRMQRNRNAYSIDEASKAIKEAEKARKARKKKWTSNMKMMSLL
complement(1541685..1544522)       PHAGE_Staphy_SMSAP5_NC_019513: phage tail tape measure protein; USA300LVJ_13970; phage(gi422935797)     0.0                 StaphylococcusaureusMNEKVEGMTLELKLDHLGVQECMKGLKRQLGVVNSEMKANLSAFDKSEKSMEKYQARIKGLNDRLKVQKKMYSQVEDELKQVNANYQKAKSSVKDVEKAYLKLVEANKKEKLALDKSKEALKSSNTELKKAENQYKRTNQRKQDAYQKLKQLRDAEQKLKNSNQATTAQLKRASDAVQKQSAKHKALVEQYKQEGNQVQKLKVQNDNLSKSNDKIESSYAKTNTKLKQTEKEFNDLNNTIKNHSANVAKAETAVNKEKAALNNLERSIDKASSEMKTFNKEQMIAQSHFGKLASQADVMSKKFSSIGDKMTSLGRTMTMGVSTPITLGLGAALKTSADFEGQMSRVGAIAQASSKDLKSMSNQAVDLGAKTSKSANEVAKGMEELAALGFNAKQTMEAMPGVISAAEASGAEMATTATVMASAINSFGLKASDANHVADLLARSANDSAADIQYMGDALKYAGTPAKALGVSIEDTSAAIEVLSNSGLEGSQAGTALRASFIRLANPSKNTAKEMKKLGIHLSDAKGQFVGMGELIRQFQDNMKGMTREQKLATVATIVGTEAASGFLALIEAGPDKINSYSKSLKNSNGESKKAADLMKDNLKGALEQLGGAFESLAIEVGKDLTPMIRAGAEGLTKLVDGFTHLPGWVRKASVGLALFGAAIGPAVLAGGLLIRTVGSAAKGYASLNRRIAENTILSNTNSKAMKSLGLQTLFLGSTTGKTSKGFKGLAGAMMFNLKPINVLKNSAKLAILPFKLLKNGLGLAAKSLFAVSGGARFAGVALRFLTGPIGATITAITIAYKVFKTAYDRVEWFRNGINGLGETIKFFGGKIIGGAVRKLGEFKNYLGSIGKSFKEKFSKDMKDGYKSLSDDDLLKVGVNKFKGFMQTMGTASKKASDTVKVLGKGVSKETEKALEKYVHYSEENSRIMEKVRLNSGQISEDKAK
complement(1544536..1544694)       PHAGE_Staphy_StauST398_2_NC_021323: hypothetical protein; USA300LVJ_13980; phage(gi509139926)     5.25e-30            StaphylococcusaureusMEQYGWTLTEVRKQPYVKLLEILNEENKEETEEKQSEQKVITGTDLRKLFGS
complement(1544736..1545086)       PHAGE_Staphy_StauST398_2_NC_021323: hypothetical protein; USA300LVJ_13990; phage(gi509139925)     8.38e-78            StaphylococcusaureusMIKFEIKDRKTGKTESYTKEDVTMGEAEKCYEYLELVNQENKKEAPNATKMRQKERQLLVDLFKDEGLTEEDVLNKMSTKTYTKALQDIFREINGEDEEDSETEPEEMGKTEEQSQ
complement(1545144..1545599)       PHAGE_Staphy_phi2958PVL_NC_011344: major tail protein 2; USA300LVJ_14000; phage(gi209363596)     7.25e-105           StaphylococcusaureusMTKTLKVYKGDDVVASEQGEGKVSVTLSNLEADTTYPKGTYQVAWEENGKESSKVDVPQFKTNPILVSGVSFTPETKSIMVNTDDNVEPNIAPSTATNKILKYTSEHPEFVTVDENTGAIHGVAEGTSVITAMSTDGSDKSGQISVTVTNG
complement(1545691..1546332)       PHAGE_Staphy_SMSAP5_NC_019513: major tail protein; USA300LVJ_14010; phage(gi422935812)     3.34e-155           StaphylococcusaureusMAEGQGSYKVGFKRLYVGVFNPEATKVVKRMTWEDEKGGTVDLNITGLAPDLVDMFASNKRVWMKKQGTNEVKSDMSIFNIPSDDLNTVIGRTKDKNGTSWVGENTRAPYVTVIGESEDGLTGQPVYVALLKGTFSLDSIEFKTRGEKAEAPEPTKLTGDWMNRKVDVDGTSQGIVYGYHEGKEGEAEFFKKVFVGYTDSEDHSEDSAGSLPS
complement(1546367..1546762)       PHAGE_Staphy_SMSAP5_NC_019513: hypothetical protein; USA300LVJ_14020; phage(gi422935824)     1.96e-90            StaphylococcusaureusMNILNTIKGILLSDAELKTHINSRIYYYKVTENAETSKPFVVITPVYDLPSDFMSDKYLSEEYLIQIDVESSNNQKTIDITKRIRYLLYQQNLIQASSQLDAYFEETKRYVMSRRYQGIPKNIYYKNQRIE
complement(1546763..1547164)       PHAGE_Staphy_SMSAP5_NC_019513: putative DNA-binding protein; USA300LVJ_14030; phage(gi422935822)     2.44e-93            StaphylococcusaureusMSVEIKGIPEVLNKLESVYGKQAMQAKSDKALNEASEFFIKALKKEFESFKDTGASIEEMTKSKPYTKVGSQERAVLIEWVGPMNRKNIIHLNEHGYTRDGKKYTPRGFGVIAKTLAASERKYREIIKKELAR
complement(1547161..1547493)       PHAGE_Staphy_SMSAP5_NC_019513: hypothetical protein; USA300LVJ_14040; phage(gi422935831)     1.95e-76            StaphylococcusaureusMEFNEFKDRAYFFQYINKGPYPDEEEKMKLYSCFCKIYNPSMKDREILKATESKSGLTIIVRSSKTEYLPQTNHLVKIDSALYSDKLFNIVEIRIDTPDIGYNTVVLSEK
complement(1547505..1547783)       PHAGE_Staphy_StauST398_2_NC_021323: putative DNA packaging protein; USA300LVJ_14050; phage(gi509139918)     4.09e-61            StaphylococcusaureusMSLEEIKLWLRIDYNFENDLIEGLIQSAKSELLLSGVPDYDKDDLEYPLFCTAIKYIIARDYESRGYSNDQSRSKVFNEKGLQKMILKLKKW
complement(1547852..1549015)       PHAGE_Staphy_YMC/09/04/R1988_NC_022758: major head protein; USA300LVJ_14060; phage(gi557308060)     0.0                 StaphylococcusaureusMPTLYELKQSLGMIGQQLKNKNDELSQKATDPNIDMEDIKQLETEKAGLQQRFNIVERQVQDIEEKEKAKVKDKGEAYQSLSDNEKMVKAKAEFYRHAILPNEFEKPSMEAQRLLHALPTGNDSGGDKLLPKTLSKEIVSEPFAKNQLREKARLTNIKGLEIPRVSYTLDDDDFITDVETAKELKAKGDTVKFTTNKFKVFAAISDTVIHGSDVDLVNWVENALQSGLAAKERKDALAVSPKSGLEHMSFYNGSVKEVEGADMYDAIINALADLHEDYRDNATIYMRYADYVKIISVLSNGTTNFFDTPAEKVFGKPVVFTDAAVKPIVGDFNYFGINYDGTTYDTDKDVKKGEYLFVLTAWYDQQRTLDSAFRIAKAKENTGPLPS
complement(1549027..1549800)       PHAGE_Staphy_SMSAP5_NC_019513: protease; USA300LVJ_14070; phage(gi422935811)         0.0                 StaphylococcusaureusMSMKAKYFQMKRKSKSKGEIFIYGDIVSDKWFESDVTATDFKNKLDELGDISEIDVHINSSGGSVFEGHAIYNMLKMHPAKINIYVDALAASIASVIAMSGDTIFMHKNSFLMIHNSWVMTVGNAEELRKTADLLEKTDAVSNSAYLDKAKDLDQEHLKQMLDAETWLTAEEALSFGLIDEILGANEIAASISKEQYKRFENVPEDLKKDVDKITKIDDVDTSELVETPKESMSLEEKEKREKIKRECEILKMTMNY
complement(1549784..1551022)       PHAGE_Staphy_phi7401PVL_NC_020199: portal protein; USA300LVJ_14080; phage(gi448244665)     0.0                 StaphylococcusaureusMNVIAKENIVTRIKKKLIDNWIDQSASKLYDFSPWKNKSFWGVINNTLETNETIFSAITKLSNSMASLPLKMYEDYKVVNTEVSDLLTVSPNNSLSSFDFINQIETIRNEKGNAYVLIERDIYHQPSKLFLLNPDVVEMLIENQSRELYYSIHAATGNKLIVHNMDMLHFKHIVASNMVQGISPIDVLKNTTDFDNAVRTFNLTEMQKPDSFMLKYGSNVGKEKRQQVLEDFKQYYEENGGILFQEPGVEIEPLPKKYVSEDIVASENLTRERVANVFQLPSVFLNARSNTNFAKNEELNRFYLQHTLLPIVKQYEEEFNRKLLTKTDREKNRYFKFNVKSYLRADSATQAEVYFKAVRSGYYTINDIREWEDLPPVEGGDKPLISGDLYPIDTPLELRKSLKGGDKNVNES
complement(1551027..1552718)       PHAGE_Staphy_47_NC_007054: ORF005; USA300LVJ_14090; phage(gi66395661)                0.0                 StaphylococcusaureusMTIKVLNEPSPKLLTTWYAEQVTQGKIKTSKYVKKECERHLRYLENGGKWVFDEELAHRPIRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTTISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLDKNFRTLRDEIHYDATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAGYQLDGPLVDMVEAGRDTLDQIIEDERTFYYLASLDDDDDINDSSNWIKANPNLGVSINLDEMKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNEIVSLEELEGRPCTIGYDLSETEDFTAACATFALDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEDGLLTVQDKPYIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPALKDLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDIMNKVVSDKGEGNIEFISIKDIMR
complement(1552708..1553013)       PHAGE_Staphy_47_NC_007054: ORF038; USA300LVJ_14100; phage(gi66395693)                2.72e-68            StaphylococcusaureusMKLTKKQLKEYIEDYKKSDDILINLYIETYEFYCRLRDELKNSDLMIEHTNKAGASNIVKNPLSIELTKTVQTLNNLLKSMGLTAAQRKKIVQEEGGFGDY
complement(1553140..1553454)       PHAGE_Staphy_SMSAP5_NC_019513: HNH endonuclease; USA300LVJ_14110; phage(gi422935836)     1.09e-71            StaphylococcusaureusMTKHNNIYKHGRKSYQYDWFYHSKAWKKLREIALDRDNHLCQMCLREDIVTDANIVHHIIYVDEDFNKALELDNLMSVCYGCHNKIHANGNDKSNLKKIRVLKI
complement(1553611..1554048)       PHAGE_Staphy_SMSAP5_NC_019513: phage regulatory protein; USA300LVJ_14120; phage(gi422935818)     1.17e-102           StaphylococcusaureusMGNTIYDIKPGTFKYIESEIYNLNENKKEIKRLRLEILNPTKEQDSNIVYGPLQKGEPVRTTELMATRLLTNKMLRNLEEMVEAVESEYLKLPEDHKKVIRLKYWNKEKKLKMEQIGHECHMHRNTVTTIRKNFVKAVAYHAGIK
complement(1554061..1555419)       PHAGE_Staphy_YMC/09/04/R1988_NC_022758: SNF2 domain protein; USA300LVJ_14130; phage(gi557308115)     0.0                 StaphylococcusaureusMAIDFKPHSYQKYAIDKVIDNEKYGLFLDMGLGKTVSTLTAFSELQLLDTKKMLVIAPKQVAKDTWVDEVDKWNHLNHLKVSLVLGTPKERNDALNTEADIYVTNKENTKWLCDQYKKEWPFDMVVIDELSTFKSPKSQRFKSIKKKLPLINRFIGLTGTPSPNSLQDLWAQVYLIDRGERLESSFSRYRERYFKPTHQVSEHIFKWELRDGSEEKIYKQIEDICLSMKAKDYLDMPDRVDTKQTVVLSEKERKVYEELEKNYILESEEEGTVVAQNGASLSQKLLQLSNGAVYTDEEDVRLIHDKKLDKLEEIIEESQGQPILLFYNFKHDKERILQRFKEATTLDDSNYKERWNSGDIKLLIAHPASAGHGLNLQQGGHIIVWFGLTWSLELYQQANARLYRQGQNHTTIIHHIMTDNTIDQRVYKALQNKELTQEELMKAIKARIAKHK
complement(1555409..1555699)       PHAGE_Staphy_vB_SauS_phi2_NC_028862: vrr-nuc domain protein; USA300LVJ_14140; phage(gi971750190)     2.18e-66            StaphylococcusaureusMKESTLEKYLVKEISKLNGLCLKWVAPGTRGVPDRIIIMPEGKTYFVEMKQEKGKLHPLQKYVHRQFENRDHKVYVLWNKEQVNTFIRMVGGTFGD
complement(1556040..1558487)       PHAGE_Staphy_SMSAP5_NC_019513: virulence-associated protein E; USA300LVJ_14150; phage(gi422935798)     0.0                 StaphylococcusaureusMLDKVTQIETIKYDRDVSYSYAASRLSTYWTNHNMAWSDFMQKLAQTVRTKEDLTEYNKMSKSEQADIKDVGGFVGGYLKEGKRRAGQVMNRSMLTLDIDYAAQDMTDILSMFYDFAYCLYSTHKHREISPRLRLVIPLKRNVNADEYEAIGRKVADIVGMDYFDDTTYQPHRLMYWPSTSNDAEFFFTYEDLPLLDPDKILNEYVDWTDTLEWPTSSKEESKTKRLADKQGDPEEKPGIVGAFCRAYTIEEAISTFIPDLYEKHSTNRYTYHEGSTAGGLVLYENNKFAYSHHNTDPVSGMLVNSFDLVRIHLYGAQDEDAKTDTPVNRLPSYKAMQQRAQNDEVVKKQLINDKMSDAMQDFDEIVNSDDAWSETLEITSKGTFKASIPNIEIILRNDPNLKGKIAFNEFTKQIECLGKVPWNTNFKTRQWQDGDDSSLRSYIEKIYDIHHSGKTKDAIISVAMQNAYHPVRDYLNKISWDGHKRLEKLFIKYLGVEDTEVNRTTTKKALTAGIARVMEPGCKFDYMLTLYGPQGVGKSALLKKLGGAWFSDSLVSVTGKEAYEALQGVWLMEMAELAATRKAEVEAIKHFISKQVDRFRVAYGHYIEDFPRQCIFIGTTNKVDFLRDETGGRRFWPMTVNPERVEVNWSKLTKEEIDQIWAEAKYYYEQGEELFLNPELEEEMRSIQSKHTEESPYTGIIDEYLNTPIPSNWDDLTIFERRRFYQGDVDMLPTGNVDYVERNKVCALEVFVECFGKDKGDSRGSMEIRKISNILRQLDNWSVYDGNKSGKIRFGKDYGVQIAYVRDESLEDLI
1558542..1558748                   hypothetical protein; USA300LVJ_14160                                                N/A                 StaphylococcusaureusMKTLREIIYDKYENENLRTLILLHSGKAFPVTNIISENSTFLIIKTSKTISHKLVLIYKNEIKNIRFF
complement(1558775..1558975)       PHAGE_Staphy_YMC/09/04/R1988_NC_022758: hypothetical protein; USA300LVJ_14170; phage(gi557308112)     2.68e-40            StaphylococcusaureusMWIVISIVLAIFLLILLSSISHKMKTIEALEYMNSYLFKQLVKNNGVEGLEDYENEVERIRKRFKS
complement(1559043..1559195)       PHAGE_Staphy_YMC/09/04/R1988_NC_022758: integrase regulator RinB; USA300LVJ_14180; phage(gi557308111)     8.70e-30            StaphylococcusaureusMIKQILRLLFLLAMYELGKYVTEQVYIMMTANDDVEAPSDYEKIRAEVSW
complement(1559192..1559578)       PHAGE_Staphy_77_NC_005356: 77ORF031; USA300LVJ_14190; phage(gi41189544)              1.01e-86            StaphylococcusaureusMIKKLKNMDGFDIFIVGILSLFGIFALLLVITLPIYTVASYQHKELHQGTITDKYNKRQDKEDKFYIVLDNKQVIENSDLLFKKKFDSADIQARLKVGDKVEVKTIGYRIHFLNLYPVLYEVKKVDKQ
complement(1559571..1559807)       PHAGE_Staphy_SMSAP5_NC_019513: hypothetical protein; USA300LVJ_14200; phage(gi422935837)     1.90e-49            StaphylococcusaureusMINIPKMKFPKKYTEIIKKYKNKAPEEKAKIEDDFIKEIKDKDSEFYSPTMANMNEYELRAMLRMMPSLIDTGDDNDD
complement(1559800..1560003)       PHAGE_Staphy_StauST398_3_NC_021332: hypothetical protein; USA300LVJ_14210; phage(gi509140973)     8.12e-41            StaphylococcusaureusMTEVKIKTISDRVYYTTTDLASDDYINLVMNLVIEDFLPVKDVFNNEVWVKRDEIESFTFIKEANDD
complement(1560000..1560206)       PHAGE_Staphy_YMC/09/04/R1988_NC_022758: hypothetical protein; USA300LVJ_14220; phage(gi557308110)     2.38e-40            StaphylococcusaureusMTQYLVTTFKDSTGRKHTHITKAKSNQRFTVVEAESKEEAERKYEAQVKRDAVIKVGQLFENIRECGK
complement(1560243..1560779)       PHAGE_Staphy_SMSAP5_NC_019513: dUTP diphosphatase superfamily protein; USA300LVJ_14230; phage(gi422935815)     1.62e-128           StaphylococcusaureusMTNTLTIDQLQELLQIQKEFDDRIPTLNLRDSKIAYVVEFFEWFNTLETFKNWKKKPGKPLDVQLDELADMLAFGLSIANQVGVSSEEIKEAIESSFKNSEFHNMFNFKDKEFAQDAVVSTPQIIFKEFYPDQLAIVIAIDIAFNLYSIDQLIDAYKKKMKRNHERQDGTADAGKGYV
complement(1560772..1561020)       PHAGE_Staphy_80_NC_030652: hypothetical protein; USA300LVJ_14240; phage(gi100027)     1.15e-51            StaphylococcusaureusMNNREQIEQSIISASAYNGNDTEGLLKEIEDVYKKAQAFDEILEGLPNAMQDALKEDIGLDEAVGIMTGQVVYKYEEDQEND
complement(1561035..1561277)       PHAGE_Staphy_SA97_NC_029010: hypothetical protein; USA300LVJ_14250; phage(gi971765341)     1.77e-51            StaphylococcusaureusMTDSARKERLNQFFGSKRYLYQDNERVAHTHVVNGTYYFHGHIVPGWQSVKKTFDTAEELEIYIKQHGLEYEEQKQLTLF
complement(1561292..1561492)       PHAGE_Staphy_phiPVL_CN125_NC_012784: hypothetical protein; USA300LVJ_14260; phage(gi239507386)     4.23e-40            StaphylococcusaureusMATQKQVDYVMSLQEQLELEDCEKYTDEQVKAMSHKEVSNVIENYKTSIRNEELYYECMSFGLPNC
complement(1561495..1561752)       PHAGE_Staphy_phiETA2_NC_008798: hypothetical protein; USA300LVJ_14270; phage(gi122891743)     1.17e-57            StaphylococcusaureusMSIISNRKVDMNETQDNVKQPAHYTYGDIEIIDFIEQVTAQYPPQLAFAIGNAIKYLSRAPLKNGHEDLAKAKFYVDRVFDLWEG
complement(1561752..1562153)       PHAGE_Staphy_SMSAP5_NC_019513: putative DNA-binding protein; USA300LVJ_14280; phage(gi422935821)     1.15e-92            StaphylococcusaureusMARRKVIRVRIKGKLMTLREVSEKYHISPELLRYRYKHKMRGDELLCGRKDSKSKDEVEYMKSQIKDEEKEREKIRKKAILNLYQRNVRAEYEEERKRRLRPWLYDGTPQKHSRDPYWFDVTYNQMFKKWSEA
complement(1562153..1562338)       PHAGE_Staphy_phi2958PVL_NC_011344: hypothetical protein; USA300LVJ_14290; phage(gi209363572)     6.40e-37            StaphylococcusaureusMQHQAYINASVDIRIPTEVESVNYNQIDKEKENLADYLFNNPGELLKYNVINIKVLDLEVE
complement(1562351..1564312)       PHAGE_Staphy_SMSAP5_NC_019513: DNA polymerase; USA300LVJ_14300; phage(gi422935799)     0.0                 StaphylococcusaureusMRFMNIDIETYSSNDISKCGAYKYTEAEDFEILIIAYSIDGGAISAIDMTKVDNEPFHADFETFKIALFDPAVKKYAFNANFERTCLAKHFNKQMPPEEWICTMVNSMRIGLPASLDKVGEVLRLQNQKDKAGKNLIRYFSIPCKPTKVNGGRTRNLPEHDLEKWQQFIDYCIRDVEVEMTIAHKIKDFPVTAIEQAYWVFDQHINDRGIKLSKSLMLGANVLDKQSKEELLNQAKHITGLENPNSPTQLLAWLKDDQGLDIPNLQKKTVQEYLKEATGKAKKMLEIRLQMSKTSVKKYNKMHDMMCSDERVRGLFQFYGAGTGRWAGRGVQLQNLTKHYISDTELEIARDLIKEQRFDDLDLLLNVHPQDLLSQLVRTTFTAEEGNELAVSDFSAIEARVIAWYAKEQWRLDVFNTHGKIYEASASQMFNVPVESITKGDPLRQKGKVSELALGYQGGAGALKAMGALEMGIEENELQGLVDSWRNANPNIVNFWKACQEAAINTVKSRKTHHTHGVRFYMKKGFLMIELPSGRALAYPKASVGENSWGSQVVEFMGLDLNRKWSKLKTYGGKLVENIVQATARDLLAISIARLEASGFKIVGHVHDEVIVEIPRGSNGLKEIETIMNKPVDWAKGLNLNSDGFTSPFYMKD
complement(1564371..1564928)       PHAGE_Staphy_SMSAP5_NC_019513: hypothetical protein; USA300LVJ_14310; phage(gi422935814)     2.40e-132           StaphylococcusaureusMKAKVLNKTKVITGKVRASYAHIFEPHSMQEGQESKYSISLIIPKSDTSTIKAIEQAIEAAKEEGKVSKFGGKVPANLKLPLRDGDTEREDDVNYQDAYFINASSKQAPGIIDQNKIRLTDSGTVVSGDYIRASINLFPFNTNGNKGIAVGLNNIQLVEKGEPLGGASAAEDDFDELDTDDEDFL
complement(1564954..1566120)       PHAGE_Staphy_SMSAP5_NC_019513: PF10926 family protein; USA300LVJ_14320; phage(gi422935808)     0.0                 StaphylococcusaureusMKLDHSNRAHAKLSASGAKQWLNCPPSIKASEGIADKSTVFAEEGTFAHELSELYFSLKYEGLTQFEFNKAFQNYKRNQYYSEELREYVEEYVANVEEKYNEALSRDNDVIALFETKLDLGKYVPESFGTGDVIIFSGGVLEIIDLKYGKGIEVSAIDNPQLRLYGLGAYELLSLMYDIHTIRMTIIQPRIDNFSTEELPISRLLQWGADFVKPLARLAYNGGGEFKAGSHCRFCKINHSCRTRAEYMQNVPQKPPHLLSDEEIAELLYKLPDIKKWADEVEQYALNQAKENDKNYPGWKLVEGRSRRMITDTKAMLEKLVEAGYKPEDITETKLLSITNLEKLIGKKAFSKITEGFIEKPQGKLTLATESDKRPAIKQSAEDDFDKL
complement(1566117..1566479)       PHAGE_Staphy_SMSAP5_NC_019513: hypothetical protein; USA300LVJ_14330; phage(gi422935829)     5.87e-80            StaphylococcusaureusMAILEDIFEELKLLNNNLRVLNTELSTVDSSIVQEKVKEAPMPKEETAQLESIEEVKETSADLTKDYVLSVGKEFLKKADTSDKKEFRNKLNELGADKLSTIKEEHYEKIVDFMNARINA
complement(1566493..1566753)       PHAGE_Staphy_3MRA_NC_028917: hypothetical protein; USA300LVJ_14340; phage(gi971755510)     6.81e-58            StaphylococcusaureusMYYKFGEIKNKIISFNGFEFKVSAMKKHDGISIQIKDMNNIPLKSFHVVDLSELYFATDAMRDVINEWIEENTDEQDRLINLVMKW
complement(1566758..1567060)       PHAGE_Staphy_3MRA_NC_028917: hypothetical protein; USA300LVJ_14350; phage(gi971755511)     7.42e-65            StaphylococcusaureusMTKKYKDMTQEEVKDLLSEKSGELYELAKEIKGESKFDILLFSSIGVIDGDYLAGSSSVIGHTFDLASLLDSTKSYKDIVNVLQMCKSQKFHGIDDNKEG
complement(1567053..1567370)       PHAGE_Staphy_96_NC_007057: ORF045; USA300LVJ_14360; phage(gi66395930)                7.93e-55            StaphylococcusaureusMAENIKTEQHYYTKDFSGYRNEEDNFVANQELTVTITLNEYRKLIEIKAVKDKEEDTYRGKYFAEERKNEKLEKENIKLKNKIYELQNEEDNEEDEENEEEVNND
1567386..1567397                   attR                                                                                 N/A                 TATATTTTGATT
complement(1567636..1567899)       PHAGE_Staphy_phi2958PVL_NC_011344: hypothetical protein; USA300LVJ_14370; phage(gi209363565)     5.52e-59            StaphylococcusaureusMPKIIVPPTPENTYRGEEKFVKKLYATPTQIHQLFGVCRSTVYNWLKYYRKDNLGVENLYIDYSPTGTLINISKLEEYLIRKHKKWY
complement(1567924..1568139)       PHAGE_Staphy_Ipla35_NC_011612: hypothetical protein; USA300LVJ_14380; phage(gi215401118)     9.61e-45            StaphylococcusaureusMNKKSEGLDIIIPRIFRRDHASVESLTENERRLRKEILGSIKKGDYSYLEINKVFYALDRELQYRANNNKL
1568186..1568425                   PHAGE_Staphy_Ipla35_NC_011612: hypothetical protein; USA300LVJ_14390; phage(gi215401117)     5.73e-47            StaphylococcusaureusMISIHKRLLTQYLDKEIVTSLDLHLINGEVIKVQEHIKDAESKTLHIIHPKDRVVSLDHVLYFDINVKGEKNNDSPYPS
complement(1568422..1568598)       PHAGE_Staphy_23MRA_NC_028775: hypothetical protein; USA300LVJ_14400; phage(gi971742288)     1.33e-36            StaphylococcusaureusMNEEKLKMILLLLEDIPRDEWNRLVNEVNNQYSYQADKVGLASDNCQQIANNYKHYGF
complement(1568682..1568873)       PHAGE_Staphy_vB_SauS_phi2_NC_028862: DNA-binding helix-turn-helix protein; USA300LVJ_14410; phage(gi971750165)     3.12e-39            StaphylococcusaureusMPEQLSVRKWRLVRDLKQQEVADILGVNAKTVGHWEKDDTNLSNVTVYALAKLYDIEVDQIKV
1569034..1569363                   PHAGE_Staphy_SMSAP5_NC_019513: putative phage regulatory protein; USA300LVJ_14420; phage(gi422935832)     6.03e-75            StaphylococcusaureusMENNKVRKILSENLQELMNDKNIDQRELAEAIGVSQPTVSNWIQQTKYPRIKRIQQLADYFNVPKSRITESKKDIHQETIAAHFDKEGLTEEEIEEVNRFIEWVRNRDK
1569376..1569837                   PHAGE_Staphy_SMSAP5_NC_019513: hypothetical protein; USA300LVJ_14430; phage(gi422935827)     4.99e-84            StaphylococcusaureusMGLYEELCINNEKIKIEETDQLPNFQPGCYMNGKIYIRRNLSEVRKAEVLYEQLAHHKLTYGNILDQTKWINRKFENYARRHGFTSAVPLHEIVEAHNYGVRNLYELSEYLQLSESYILEAIEQYKKIYGIGTHYGEYSITFEPLRVFKYKEI
1569855..1570289                   PHAGE_Staphy_SMSAP5_NC_019513: putative lipoprotein; USA300LVJ_14440; phage(gi422935819)     1.87e-58            StaphylococcusaureusMKKVIGLLLVSTLALTACGEKEKPKKEENKKSQTQNHKDSKPKTQQEKMKKVEDKNPPNNSIQNNSNNQNQSQNNQLNNNSDPSNNTPANINENDSQNTNLNDEYVVSPGWTKDEQAKAFEEYKKGKEEEARAGASAVPGANIN
1570318..1570713                   PHAGE_Staphy_SMSAP5_NC_019513: hypothetical protein; USA300LVJ_14450; phage(gi422935823)     1.17e-86            StaphylococcusaureusMETNKTIDLMNYVEFPKRYTEAKGKLVAQPITTINSARRVENEDMTVCYILDQDDDVMDFIFDRDIITVYCPENGTATDEYFCEIIFNSDDTFTLKRLSNYVTIKDRSYPMSKINDVNITGKVVRLFRDFK
1570824..1570949                   PHAGE_Staphy_StauST398_2_NC_021323: hypothetical protein; USA300LVJ_14460; phage(gi509139881)     2.29e-20            StaphylococcusaureusMVDKNKKQETTRSNPLNKSFEKSGASEKLKSTLSEKAKKKD
complement(1570946..1571560)       PHAGE_Staphy_phi2958PVL_NC_011344: Na(+)/K(+) ATPase; USA300LVJ_14470; phage(gi209363555)     3.88e-142           StaphylococcusaureusMTQFLGALLLTGVLGYIPYKYLTMIGLVSEKNKVINTPVLLIFSIETCLIWFYSFIIFNNVDLKNLNLIQLLTGLKANILFLFIFVLTVFVFNPLIVKFIIWLINITRKFMKLDCISLLDKRDKLFNNNGKPVFIVIKDFENRIIEEGELKTYNSAGSDFDLLEVERQDFKVSDLPSNDELYIKHTLVDLKQQIKLDLYLMNEY
1571686..1572891                   PHAGE_Staphy_StauST398_2_NC_021323: integrase; USA300LVJ_14480; phage(gi509139879)     0.0                 StaphylococcusaureusMWIEKFKNKNNETKYRYYEKYKDPYTDKWKRVSVVLNKNTKQSQKEAMFSLEEKIKEKLNNKSSSELKTLTFHALLDEWLEYHIKTSGSKLTTLNNIKIRIRNIKRYSSENLLLNKLDTKYMQIFINKLSDIYSQNQVTRQLGDMKGAIKYAVKFYNYPNEYLLTNVKIPKRRKTIEDIEKDESKMYNYLEMNQVLQIRDHILNDNKLHKRNRILIASILEVQALTGMRIGELQALQEKDIDLLNKTINITGTIHRIKYEEGFGYKDTTKTISSKRSISINSRTVEIFKKIILENKMLKRWNSSYVDRGFIFTTKKGNPLCNNQIAGVLKKTTKALNMNKKVTTHTFRHTHITLLVEMNVSLKAIMKRVGHVDEKTTIRIYTHVTEKMDRELTQKLENIPS
1572896..1572916                   attR                                                                                 N/A                 AATCCGCCCTTTTTTTGCCCT
complement(1572934..1574961)       PHAGE_Staphy_phi2958PVL_NC_011344: hypothetical protein; USA300LVJ_14490; phage(gi209363553)     1.01e-145           StaphylococcusaureusMNKINDRDLTELSSYWVYQNIDIKKEFKVNGKRFKQVDSYNDDKNSNLNGAADIKIYELLDDKSKPTGQQTIIYQGTSNEAINPNNPLKSSGFGDDWLQNAKLMNNDNESTDYLKQTDQLSNQYKIKLEDADRLSNSDFLKKYRMESSNFKNKTIVADGGNSEGGAGAKYQGAKHPNEKVVATDSAMIPYAAWQKFARPRFDNMISFNSTNDLLTWLQDPFIKDMPGKRVNINDGVPRLDTLIDSHVGYKRKLNRKDNTYDTVPLIKIKSVKDTEIKNGKKVKKTINITLDMDGRIPINVWTGDSIARSGRGTLIKLNLENLDALSKLITGETSGMLAECVIFLNESFNISENENKNFADRKKQLSEGFKDKINLFQLEEMERTLISKINSLEEVADETIESISAVKHLLPDFALDALKERINELFKGIKSFIEKVYDSIDNEILEIFKNIDHDFRDGVSEEMMKHLKVVKQNIDQIKNQNDIYGRQIADIRSIMKQQDATILDGNFQINCSGENMVQGLVIPSNYLGRKMKILKDHIDDGIKKIADYVQGIYDEYASKIVDVIKYLINTIPKIRKNLRHAIEMLNVKKKEFLSLIPNVTCNYIKTKLEELDNTLGKWEPFLNDLKAVSPILDNHLDDIVKNMKPLIVQMIFEPSHYDDMFISRKALTPVFSSVL
complement(1574954..1575883)       DUF1672 domain-containing protein; USA300LVJ_14500                                   N/A                 StaphylococcusaureusMKKFIGSVLATTLILGGCSTMENESKKDTKTETKSVPEEMEASKYVGQGFQPPAEKNAIEFAKKHRKEFEKVGEQFFKDNFGLKVKATNVVGKDDGVEVYVHCEDHGIVFNASLPLYKDAIHQKGSMRSNDNGDDMSMMVGTVLSGFEYRAQKEKYDNLYKFFKENEKKYQYTGFTKEAINKTQNVGYKNEYFYITYSSRSLKEYRKYYEPLIRKNDKEFKEGMERARKEVNYAANTDAVATLFSTKKNFTKDNTVDDVIELSDKLYNLKNKPDKSTITIQIGKPTINTKKAFYDDNRPIEYGVHSKDE
complement(1576128..1577879)       HAMP domain-containing protein; USA300LVJ_14510                                      N/A                 StaphylococcusaureusMMSRLNSVVIKLWLTIILIVTTVLILLSIALITFMQYYFTQETENAIREDARRISSLVEQSHNKEEAIKYSQTLIENPGGLMIINNKHRQSTASLSNIKKQMLNEVVNNDHFDDVFDKGKSVTRNVTIKEKGSSQTYILLGYPTKAQKNSHSKYSGVFIYKDLKSIEDTNNAITIITIITAVIFLTITTVFAFFLSSRITKPLRRLRDQATRVSEGDYSYKPSVTTKDEIGQLSQAFNQMSTEIEEHVDALSTSKNIRDSLINSMVEGVLGINESRQIILSNKMANDIMDNIDEDAKAFLLRQIEDTFKSKQTEMRDLEMNARFFVVTTSYIDKIEQGGKSGVVVTVRDMTNEHNLDQMKKDFIANVSHELRTPISLLQGYTESIVDGIVTEPDEIKESLAIVLDESKRLNRLVNELLNVARMDAEGLSVNKEVQPIAALLDKMKIKYRQQADDLGLNMTFNYCKKRVWSYDMDRMDQVLTNLIDNASRYTKPGDEIAITCDENESEDILYIKDTGTGIAPEHLQQVFDRFYKVDAARTRGKQGTGLGLFICKMIIEEHGGSIDVKSELGKGTTFIIKLPKPE
complement(1577860..1578585)       PHAGE_Roseob_1_NC_015466: transcriptional regulator CtrA; USA300LVJ_14520; phage(gi331028091)     9.55e-06            StaphylococcusaureusMSNEILIVDDEDRIRRLLKMYLERESFEIHEASNGQEAYELAMENNYACILLDLMLPEMDGIQVATKLREHKQTPIIMLTAKGEETNRVEGFESGADDYIVKPFSPREVVLRVKALLRRTQSTTVEQSEPHARDVIEFKHLEIDNDAHRVLADNQEVNLTPKEYELLIYLAKTPNKVFDREQLLKEVWHYEFYGDLRTVDTHVKRLREKLNRVSSEAAHMIQTVWGVGYKFEVKSNDEPAK
complement(1578718..1579455)       rRNA pseudouridine synthase; USA300LVJ_14530                                         N/A                 StaphylococcusaureusMTKELERLQKRIANSGYTSRRKAETLISEGKVKVNGTTVTELGTKVKPSDTIEVEGIKIELEDKIYILFHKPTQVITSVSDDRGRTVVTDYFKDIEARIYPVGRLDYDTSGLLLLTNDGEFTNLMTHPRYQIKKKYVAKLKGYLMREEVKALEKGIELEDGMTQPAEVKVKKQDKDKNTTLVEITITEGRNRQVRRMFEHFGHQVTKLSRIEYGPLNVVGLNAGEGRVLTPHEVKVMRHLAEHGK
complement(1579448..1579990)       SMC-Scp complex subunit ScpB; USA300LVJ_14540                                        N/A                 StaphylococcusaureusMDNHGILESLLFTAGDEGLDEKQLLEILDMSKDQLVELIENYSSHGLMIQRFGMTYVLTTKKEAATYIEQLIEQKSQMKLSQAAMEVLSIIAYNQPLSRSDIELIRSINSDGAVKTLIAKGLVEAKVVNEQRSQQLITTDLFLNVFGISNIEDLPTTEEDDEEMDAFFSNLVNQKGENND
complement(1579983..1580714)       segregation and condensation protein A; USA300LVJ_14550                              N/A                 StaphylococcusaureusMYEVKLDAFNGPLDLLLHLIQKFEIDIYDIPMQALTEQYMQYVHAMKQLEINIASEYLVLASELLMIKSKMLLPQSTSDMDVDDDPREDLVGRLIEYQNYKEYTAILNDMKEERDFYFTKRPTDLSHLETDESWDPNHTIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYHFG
1580806..1581312                   DUF309 domain-containing protein; USA300LVJ_14560                                    N/A                 StaphylococcusaureusMQQALINFYYQFHTKQHYFLCHDILEDAWKAENNYSKQDAVVSLILFATACYHYRRNNLKGAYKSFNKSKEIIQNAKDRDALYLNLNDYQLLIEQQIAKLNAAKPFSSVILPITPVFERIIKANYPDYDYNQETATDPFIVDHHMRRDRSEVIAAKEEAIQLRKHRRN
complement(1581390..1582277)       PHAGE_Thermu_P2345_NC_009803: XerD-like integrase; USA300LVJ_14570; phage(gi157265299)     2.20e-23            StaphylococcusaureusMETIIEEYLRFIQIEKGLSSNTIGAYRRDLKKYQDYMTEHHISHIDFIDRQLIQECLGHLIDQGQSAKSIARFISTIRSFHQFAIREKYAAKDPTVLLDSPKYDKKLPDVLNVDEVLALLETPDLNKINGYRDRTMLELLYATGMRVSELIHLELENVNLIMGFVRVFGKGDKERIVPLGDAVIEYLTTYIETIRPQLLKKTVTEVLFLNMHGKPLSRQAIWKMIKQNGVKANIKKTLTPHTLRHSFATHLLENGADLRAVQEMLGHSDISTTQLYTHVSKSQIRKMYNQFHPRA
1584566..1584577                   attR                                                                                 N/A                 TAATTTCGCCTT

#### region 2 ####
2052704..2052883                   PHAGE_Staphy_phiN315_NC_004740: hypothetical protein; USA300LVJ_18930; phage(gi30043926)     2.09e-35            StaphylococcusaureusMKFKTTKECKSNNIFKRSQEINNRESEKGCLWGISMLILLFLLILFGITACSSSIHFIN
complement(2052963..2053118)       PHAGE_Staphy_phiNM3_NC_008617: hypothetical protein; USA300LVJ_18940; phage(gi118725118)     5.84e-29            StaphylococcusaureusMVNKINKFNQYVARFIPYIATKIPIKKNIAPMIKQKSDAELLKNEVFRVRK
complement(2053507..2053857)       PHAGE_Staphy_phiNM3_NC_008617: Staphylococcal complement inhibitor; USA300LVJ_18950; phage(gi118725117)     6.59e-77            StaphylococcusaureusMKIRKSILAGTLAIVLASPLVTNLDKNEAQASTSLPTSNEYQNEKLANELKSLLDELNVNELATGSLNTYYKRTIKISGQKAMYALKSKDFKKMSEAKYQLQKIYNEIDEALKSKY
2054542..2054991                   PHAGE_Staphy_phiNM3_NC_008617: chemotaxis-inhibiting protein CHIPS; USA300LVJ_18960; phage(gi118725116)     1.19e-103           StaphylococcusaureusMKKKLATTVLALSFLTAGISTHHHSAKAFTFEPFPTNEEIESNKKMLEKEKAYKESFKNSGLPTTLGKLDERLRNYLKKGTKNSAQFEKMVILTENKGYYTVYLNTPLAEDRKNVELLGKMYKTYFFKKGESKSSYVINGPGKTNEYAY
2055004..2055016                   attL                                                                                 N/A                 AAATTAAAAGGTA
complement(2055086..2055382)       PHAGE_Staphy_phiNM3_NC_008617: truncated amidase; USA300LVJ_18970; phage(gi118725115)     1.40e-65            StaphylococcusaureusMPAGYTLDKNNVPYKKETGYYTVANVKGNNVRDGYSTNSRITGVLPNNATIKYDGAYCINGYRWITYIANSGQRRYIATGEVDKAGNRISSFGKFSAV
complement(2056071..2056562)       PHAGE_Staphy_phiNM3_NC_008617: staphylokinase precursor; USA300LVJ_18980; phage(gi118725114)     6.02e-114           StaphylococcusaureusMLKRGLLFLTVLLLLFSFSSITNEVSASSSFDKGKYKKGDDASYFEPTGPYLMVNVTGVDGKGNELLSPHYVEFPIKPGTTLTKEKIEYYVEWALDATAYKEFRVVELDPSAKIEVTYYDKNKKKEETKSFPITEKGFVVPDLSEHIKNPGFNLITKVIIEKK
complement(2056753..2057508)       PHAGE_Staphy_phiNM3_NC_008617: amidase; USA300LVJ_18990; phage(gi118725113)          0.0                 StaphylococcusaureusMKTYSEARARLRWYQGRYIDFDGWYGYQCADLAVDYIYWLLEIRMWGNAKDAINNDFKNMATVYENTPSFVPQIGDVAVFTKGIYKQYGHIGLVFNGGNTNQFLILEQNYDGNANTPAKLRWDNYYGCTHFIRPKYKSEGLMNKITNKVKPPAQKAVGKSASKITVGSKAPYNLKWSKGAYFNAKIDGLGATSATRYGDNRTNYRFDVGQAVYAPGTLIYVFEIIDGWCRIYWNNHNEWIWHERLIVKEVF
complement(2057520..2057774)       PHAGE_Staphy_phiNM3_NC_008617: holin; USA300LVJ_19000; phage(gi118725112)            7.03e-57            StaphylococcusaureusMINWKIRMKQKSFWVAILSAIFLFAQNIAKAIGYDIQVYTEQLTDGLNAILGFLVLTGVIQDPTTKGIGDSHQALEYEEPRRKY
complement(2057986..2058120)       PHAGE_Staphy_phiN315_NC_004740: hypothetical protein; USA300LVJ_19010; phage(gi30043935)     1.15e-21            StaphylococcusaureusMVALLKSLERRRLMITISTMLQFGLFLIALIGLVIKLIELSNKK
complement(2058312..2058608)       PHAGE_Staphy_phiPV83_NC_002486: phi PVL ORF 17 homologue; USA300LVJ_19020; phage(gi9635733)     8.63e-64            StaphylococcusaureusMGWFKKHEHEWRIRRLEENDKTMLSTLNEIKLGQKTQEQVNIKLDKTLDAIQKEREIDEKNKKENDKNIRDMKMWVLGLVGTIFGSLIIALLRMLMGI
complement(2058666..2058953)       PHAGE_Staphy_phiPV83_NC_002486: phi PVL ORF 22 homologue; USA300LVJ_19030; phage(gi9635732)     1.31e-62            StaphylococcusaureusMAKEIINNTERFILVQIDKEGTERVVYQDFTGSFTTSEMVNHAQDFKSEENAKKIAETLNLLYQLTNKKQRVKVVKEVVERSDLSPEITVNTETV
complement(2059000..2059152)       PHAGE_Staphy_phiNM3_NC_008617: hypothetical protein; USA300LVJ_19040; phage(gi118725108)     3.56e-29            StaphylococcusaureusMQDNKQGLQANPEYTIHYLSQEIMRLTQENAMLKAYIQENKENQQCAEEE
complement(2059142..2062927)       PHAGE_Staphy_phiNM3_NC_008617: phage minor structural protein; USA300LVJ_19050; phage(gi118725107)     0.0                 StaphylococcusaureusMIHVLDFNDKIIDFLSTDDPSLVRAIHKRNVNDNSEMLELLISSERAEKFRERHRVIIRDSNKQWREFIINWVQDTMDGYTEIECIASYLADITTAKPYAPGKFEKKTTSEALKDVLSDTGWEVSEQTEYDGLRTTSWTSYQTRYEVLKQLCTTYKMVLDFYIELSSNTVKGRYVVLKKKNSLFKGKEIEYGKDLVGLTRKIDMSEIKTALIAVGPENDKGKRLELVVTDDEAQSQFNLPMRYIWGIYEPQSDDQNMNETRLSSLAKTELNKRKSAVMSYEITSTDLEVTYPHEIISIGDTVRVKHRDFNPPLYVEAEVIAEEYNIISENSTYTFGQPKEFKESELREEFNKRLNLIHQKLNDNISNINTIVKDVVDGELEYFERKIHKSDTPPENPVNDTLWYDTSNPDVAVLRRYWNGRWIEATPNDVEKLGGITREKALFSELNNIFINLSIQHASLLSEATELLNSEYLVDNDLKADLQASLDAVIDVYNQIKNNLESMTPETATIGRLVDTKTLFLEYRKKLQDVYTDVEDVKIAISDRFKLLQSQYTDEKYKEALEIIATKFGLTVNEDLQLVGEPNVVKSAIEAARESTKEQLRDYVKTSDYKTDKDGIVERLDTAEAERTTLKGEIKDKVTLNEYRNGLEEQKQYTDDQLSDLSNNPEIKASIEQANQEAQEALKSYIDAQDNLKEKESQAYADGKISEEEQRAIQDAQAKLEEAKQNAELKARNAEKKANAYTDNKVKESTDAQRRTLTRYGSQIIQNGKEIKLRTTKEEFNATNRTLSNILNEIVQNVTDGTTIRYDDNGVAQALNVGPRGIRLNADKIDINGNREINLLIQNMRDKVDKTDIVNSLNLSREGLDINVNRIGIKGGNNNRYVQIQNDSIELGGIVQRTWKGKRSTDDIFTRLKDGHLRFRNNTAGGSLYMSHFGISTYIDGEGEDGGSSGTIQWWDKTYSDSGMNGITINSYGGVVALTSDNNRVVLESYASSNIKSKQAPVYLYPNTDKVPGLNRFAFTLSNADNAYSSDGYIMFGSDENYDYGAGIRFSKERNKGLVQIVNGRYATGGDTTIEAGYGKFNMLKRRDGNRYIHIQSTDLLSVGSDDAGDRIASNSIYRRTYSAAANLHITSAGTIGRSTSARKYKLSIENQYNDRDEQLEHSKAILNLPIRTWFDKAESEILARELREDRKLSEDTYKLDRYVGLIAEEVENLGLKEFVTYDDKGEIEGIAYDRLWIHLIPVIKEQQLRIKKLEESKNAG
complement(2062943..2064427)       PHAGE_Staphy_23MRA_NC_028775: tail component; USA300LVJ_19060; phage(gi971742310)     0.0                 StaphylococcusaureusMIDTIKVNNKTIPWLYVERGFEIPSFNYVLKTENVDGRSGSIYKGRRLESYSFDIPLVVRNDYLSHNGFKTHDDVLNELVKFFNYEEQVKLQFKSKDWYWNAYFEGPIKLHKEFAIPVKFTIKVVLTDPYKYSVTGYKNTAISDQVSVVNSGTADTPLIVEARAIKPSSYFMITKNDEDYFMVGDDEVTKEVKDYMPPVYHSEFRDFKGWTKMITEDIPSNDLGGKVGGDFVISNLGEGYKATNFSDAKGWVGAGTKRGLPKAMTDFQITYKCIVEQKGKGAGRTAQHIYDSDGKLLASIGYENKYHDRKIGHIVVTLYNQKGDPKKIYDYQNKPIMYNLDRIVVYMRLRRVGNKFSIKTWKFDHIKDPDRRKPIDMDEKEWIDGGKFYQRPASIIAIYSAKYNGYKWMEMNGLGSFNTEILPKPKGARDVIIQKGDLVKIDMQAKSVVINEEPMLSEKSFGSNYFNVDSGYSELIIQPENVFDTTVKWQDRYL
complement(2064424..2068953)       PHAGE_Staphy_phiNM3_NC_008617: phage tail tape measure protein; USA300LVJ_19070; phage(gi118725105)     0.0                 StaphylococcusaureusMGERIKGLSIGLDLDAANLNRSFAEIKRNFKTLNSDLKLTGNNFKYTEKSTDSYKQRIKELDGTITGYKKNVDDLAKQYDKVSQEQGENSAGAQKLRQEYNKQANELNYLERELQKTSAEFEEFKKAQVEAQRMAESGWGKTSKVFESMGPKLTKMGDGLKSIGKGMMIGVTAPVLGIAAASGKAFAEVDKGLDTVTQATGATGSELKKLQNSFKDVYGNFPADAETVGGVLGEVNTRLGFTGKELENATESFLKFSHITGSDGVQAVQLITRAMGDAGIEASEYQSVLDMVAKAAQASGISVDTLADSITKYGAPMRAMGFEMKESIALFSQWEKSGVNTEIAFSGLKKAISNWGKAGKNPREEFKKTLAEIEKTPDIASATSLAIEAFGAKAGPDLADAIKGGRFSYQEFLKTIEDSQGTVNQTFKDSESGSERFKVAMNKLKLVGADVWASIESAFAPVMEELIKKLSVAVDWFSNLSDGSKRSIVIFGGIAAAIGPVVFGLGAFISTIGNAVTVLAPLLAGIAKADGLISFLSTKVPILGTVFTALTGPIGIVLGVLAGLAVAFTIAYKKSETFRNFVNDAIESVKQTFSNFIQFIQPFIDSVKNVFKQAVSAIVDFAKDIWSQINGFFNENGISIVQALQNICNFIKVIFEFILNFVIKPIMFAIWQVMQFIWPAVKALIVSTWENIKGVIQGTLNIILGLIKFFSSLFTGDWRGVWDAIIMILKGVVQLIWNLIQLWFVGKILGVVRYFGGLLKGLITGIWDVIKSIFSKSLSAIWNATKSIFGFLFNSVKSIFTNMKNWLSNTWSSIRTNTIGKAQSLFSGVKSKFTSLWNATKDIFSNLRNWMANIWNSIKDNTVGIASRLWSKVRGIFTNMRDGLQSIISKIKSHIGGMVDAIKKGLNKLIEGLNWVGGKLGMDKIPKLHTGTEHTHTTTRLVKNGKIARDTFATVGDKGRGNGPNGFRNEIIEFPNGKRVITPNTDTTAYLPKGSKVYNGTQTYSMLNGTLPRFSLGTMWKDIKSGASSAFNWTKDQIGKGTKWLGDKVGDVLDFMENPGKLLNYILEAFGIDFNSLTKGMGIAGDITKAAWSKIKKSATDWIKENLEAMGGGDLVGGILDPDKINYHYGRTAAYTAATGRPFHEGVDFPFVYQEVRTPMGGRLTRMPFMSGGYGNYVKITSGVIDMLFAHLKNFSKSPPSGTMVKPGDVVGLTGNTGFSTGPHLHFEMRRNGRHFDPEPYLRNAKKKGRLSIGGGGATSGSGATYASRVIRQAQSILGGRYKGKWIHDQMMRVAKRESNYQSNAVNNWDINAQRGDPSRGLFQIIGSTFRANAKRGYTNFNNPVHQGISAMQYIVRRYGWDGFKRAGDYAYATGGKVFDGWYNLGEDGHPEWIIPTDPARRNDAMKMLHYAAAEVRGRKASKNKRPSQLSSVNGFDDPSLLLKMIEQQQQQIALLLKIAQSNDVIADKDYQPIIDEYAFDKKVNASIEKRERQESTKVKFRKGGIAIQ
complement(2069010..2069171)       PHAGE_Staphy_77_NC_005356: 77ORF100; USA300LVJ_19080; phage(gi41189576)              1.92e-31            StaphylococcusaureusMLKNMDTLMMDLIENGKDANEVLKMPFHYVLSIYQNKNNDISEEKAEALIDAF
complement(2069198..2069548)       PHAGE_Staphy_23MRA_NC_028775: hypothetical protein; USA300LVJ_19090; phage(gi971742315)     9.03e-81            StaphylococcusaureusMAKLKRNIIQLVEDPKANEIKLQTYLTPHFISFEIVYEAMDLIDDIEDENSTMKPREIADRLMDMVVKIYDNQFAVKDLKERMHAPDGMNALREQVVFITQGQQTEETRNFIQNMK
complement(2069598..2069738)       PHAGE_Staphy_phiNM3_NC_008617: hypothetical protein; USA300LVJ_19100; phage(gi118725102)     9.94e-24            StaphylococcusaureusMKYTTDQTNIVSINSDGQVTAEAQGIATVKAYVGNMSDTITINVEA
complement(2069864..2070508)       PHAGE_Staphy_phiNM3_NC_008617: hypothetical protein; USA300LVJ_19110; phage(gi118725101)     9.51e-147           StaphylococcusaureusMVVKQASAPKAYFNITGLGFAKLTKEGAKLEYSDITKTRGLQKIGVETGGDLKTAYADGGPIESGNTDGEGKISLQMHAFPKEIRKIVFNEEYDEYGVYKETQGKQNNYVAIWFRQERRDGTFRTVLLPKVMFTNPKIDGETAEKDWDFSSEEVEGEALFPLIDNKKSVRKYIFDSANMTNHSGNGEKGEEAFLKKILGEEYTGNVTEDNGETL
complement(2070512..2070916)       PHAGE_Staphy_phiNM3_NC_008617: hypothetical protein; USA300LVJ_19120; phage(gi118725100)     5.52e-78            StaphylococcusaureusMIDILYKVHEVISQDRIIREHVNINNIKFNKYPNVKDTDVPFIVIDDIDDPIPTTYTDGDERAYSYIVQIDVFVKFNEKYNARIIRNKISNRIQKLLWSELKMGNVSNGKPEYIEEFKTYRSTRVYEGIFYEEE
complement(2070913..2071317)       PHAGE_Staphy_phiNM3_NC_008617: hypothetical protein; USA300LVJ_19130; phage(gi118725099)     1.00e-87            StaphylococcusaureusMSVKVIGDKALERELENRFGTQAMLKVQDRALIAGAKVIVEEVKKQLKPSKDTGALINEVSFSKPEWINGKRTITVHWRGSKDRYKIVHLIENGHVQKGTGKFIKPKAMGGVNRAIRQGQNKYFETLKRELKKL
complement(2071314..2071676)       PHAGE_Staphy_phiBU01_NC_026016: head-tail adaptor; USA300LVJ_19140; phage(gi744692788)     9.87e-86            StaphylococcusaureusMKKVFKKPRITTKRLNTRVHFYKYTENNGPEAGEKEEKLLYSCWASIDGVWLRELEQAISNGTQNDIKLYIRDPQGDYLPSEEHYLEIESRYFKNRLNIKQVSPDLDNKDFIMIRGGYSS
complement(2071660..2071944)       PHAGE_Staphy_phiNM3_NC_008617: hypothetical protein; USA300LVJ_19150; phage(gi118725097)     9.19e-62            StaphylococcusaureusMTIDDLLVKFKSLEKIDHNSEDEYLKQLLKMSYERIKNQCGVFELENLIGQELILIRARYAYQDLLEHFNDNYRPEIIDFSLSLMEVSEDEESV
complement(2071934..2072218)       PHAGE_Staphy_phiNM3_NC_008617: hypothetical protein; USA300LVJ_19160; phage(gi118725096)     5.76e-63            StaphylococcusaureusMVKFKVVRAFKDIEHNQHKYKVGELYPAEGYNNPRVELLTNQIKNKYDKVYIVPLDKLTKQELLELCESLQKKASSSMVKSEIVDLLNGEDNDD
complement(2072238..2073383)       PHAGE_Staphy_phiNM3_NC_008617: hypothetical protein; USA300LVJ_19170; phage(gi118725095)     0.0                 StaphylococcusaureusMTINLSETFANAKNEFINAVNNGEPQERQNELYGDMINQLFEETKLQAKAEAERVSSLPKSAQSLSANQRSFFMDINKNVNYKEEKLLPEETIDRIFEDLTTNHPLLADLGIKNAGLRLKFLKSETSGVAVWGKIYGEIKGQLDAAFSEETAIQNKLTAFVVLPKDLNDFGPAWIERFVRVQIEEAFAVALETAFLKGTGKDQPIGLNRQVQKGVSVTEGAYPEKEEQGTLTFANPRATVNELTQVFKYHSTNEKGKSVAVKGNVTMVVNPSDAFEVQAQYTHLNANGVYVTALPFNLNVIESTVQEAGKVLTYVKGLYDGYLAGGINVQKFKETLALDDMDLYTAKQFAYGKAKDNKVAAVWKLDLKGHKPALEGTEETL
complement(2073407..2074144)       PHAGE_Staphy_phiNM3_NC_008617: putative Clp protease; USA300LVJ_19180; phage(gi118725094)     1.18e-179           StaphylococcusaureusMKAEIKGVIVSNEDKWVYEMLGMDSTCPKDVLTQLEFSDEDVDIIINSNGGNLVAGSEIYTHLRAHKGKVNVRITAIAASAASLIAMAGDHIEMSPVARMMIHNPSSIAQGEAKDLNHAAETLEHVGQIMAEAYAVRAGKNKQELVEMMARETWLNADEAIEQGFADSKMFENDNMQIVASNTQVLSKDVLNRVTALVSKTPEVNIDIDAIANKVIEKINMKEKESEIDVADSKVSANGFSRFLF
complement(2074128..2075315)       PHAGE_Staphy_phiNM3_NC_008617: phage portal protein; USA300LVJ_19190; phage(gi118725093)     0.0                 StaphylococcusaureusMSILEKIFKTRKDITYMLDLDMIEDLSQQAYVKRLAIDSCIEFVARAVAQSHFKVLEGNRIQKNDVYYKLNIKPNTDLSSDSFWQQVIYKLIYDNEVLIVVSDSKELLIADSFYREEYALYDDIFKDVTVKDYTYQRTFTMQEVIYLKYNNNKVTHFVESLFEDYGKIFGRMIGAQLKNYQIRGILKSASSAYDEKNIEKLQAFTNKLFNTFNKNQLAIAPLIEGFDYEELSNGGKNSNMPFSELSELMRDAIKNVALMIGIPPGLIYGETADLEKNTLVFEKFCLTPLLKKIQNELNAKLITQSMYLKDTRIEIVGVNKKDPLQYAEAIDKLVSSGSFTRNEVRIMLGEEPSDNPELDEYLITKNYEKANSGENDEKEKDENTLKGGDEDESGD
complement(2075331..2076992)       PHAGE_Staphy_phiNM3_NC_008617: phage terminase; USA300LVJ_19200; phage(gi118725092)     0.0                 StaphylococcusaureusMISNKYVDEYINLWKQGKIILNKERIDLFNYLQKHIYSRDDVYFDEQKIGDCIKFIEKWYFPTLPFQRFIIANIFLIDKNTDEAFFTEFAIFMGRGGGKNGLISAISDFLSTPLHGVKEYHISIVANSEDQAKTSFDEIRTVLMDNKRNKTGKTPKAPYEVSKAKIINRATKSVIRYNTSNTKTKDGGREGCVIFDEIHYFFGPEMVNVKRGGLGKKKNRRTFYISTDGFVREGYIDAMKHKIASVLSGKVKNSRLFAFYCKLDDPKEVDDRQTWEKANPMLHKPLSEYAKTLLSTIEEEYNDLPFNRSNKPEFMTKRMNLPEVDLEKVIAPWKEILATNREIPNLDNQMCIGGLDFANIRDFASVGLLFRKNDDYIWLGHSFVRQGFLDDVKLEPPIKEWEKMGLLTIVDDDVIEIEYIVDWFLKAREKYGLEKVIADNYRTDIVRRAFEDAGIKLEVLRNPKAIHGLLAPRIDTMFAKHNVIYGDNPLMRWFTNNVAVKVKPDGNKEYIKKDENRRKTDGFMAFVHALYRADDIVDKDMSKALDALMSIDF
complement(2076989..2077333)       PHAGE_Staphy_phiNM3_NC_008617: hypothetical protein; USA300LVJ_19210; phage(gi118725091)     1.85e-76            StaphylococcusaureusMEIIVDENLVLKEKERLQVLYKDIPSNKLKVVDGLIIQAARLRVMLDYMWEDIKEKGDYDLFTQSEKAPPYERERPVAKLFNARDAAYQKIIKQLSDLLPEEKEDTETPSDDYL
complement(2077463..2077762)       PHAGE_Staphy_phiNM3_NC_008617: hypothetical protein; USA300LVJ_19220; phage(gi118725090)     6.02e-67            StaphylococcusaureusMMTKDERIRFYKSKEWQTTRKRVLERDNYECQQCKRDGKLTTYDKSKRKSLDVDHILSLEHHPEFAHDLNNLETLCIKCHNKKEKRFIKKENKWKDEKW
complement(2077994..2078410)       PHAGE_Staphy_phiNM3_NC_008617: hypothetical protein; USA300LVJ_19230; phage(gi118725089)     2.27e-98            StaphylococcusaureusMIKIEKHDIKKLEEYIQHIDNYRRELKMREYELLESHEPDNAGAGKSNLPGNPIERCAIKKFSDNRYNTLRNIVNGVDRLIDESDEDTLELLRFRYWDCPIGCYEWEDIAHYFGTSKTSILRRRNALIDKLAKYIGYV
complement(2078438..2078638)       PHAGE_Staphy_phiNM3_NC_008617: hypothetical protein; USA300LVJ_19240; phage(gi118725088)     2.30e-41            StaphylococcusaureusMWITMTIVFAILLLVCISINSDRAREIQALRYMNDYLLDEVVKTKGYNGLKEYRIELKRMNNDIKK
complement(2078638..2078787)       PHAGE_Staphy_phiNM3_NC_008617: hypothetical protein; USA300LVJ_19250; phage(gi118725087)     1.16e-28            StaphylococcusaureusMIKQILRLLFLLAMYELGKYVTEQVYIMMTANDDVEAPSDYVFRAEVSE
complement(2078784..2079170)       PHAGE_Staphy_phiBU01_NC_026016: hypothetical protein; USA300LVJ_19260; phage(gi744692815)     3.18e-86            StaphylococcusaureusMIKKLKNMDGFDIFIVGILSLFGITALLLVVALPIYTVASYQNKEVHQGTITDKYNKRQDKEDKFYIVLDDKQVIENSDLFFKGKFDSADIQARLKVGDKVKVKTIGYRIHFLNLYPVLYEVKKVDKK
complement(2079167..2079373)       PHAGE_Staphy_3MRA_NC_028917: hypothetical protein; USA300LVJ_19270; phage(gi971755489)     3.86e-43            StaphylococcusaureusMTQYLVTTFKDSTGRKHTHITKAKSNQRFTVVEAESKEEAKEKYEKQVKRDAVIKVGQLFENIRECGK
complement(2079370..2079615)       PHAGE_Staphy_52A_NC_007062: ORF063; USA300LVJ_19280; phage(gi66396316)               2.49e-51            StaphylococcusaureusMSDMLEIFLIGFGVYLFYRIAIIFLKSKKTIHTNIYEMLMLATIFMISTFAYKHQKTHILIAFLVMFFMSKLKQVQGSYEE
complement(2079652..2080185)       PHAGE_Staphy_23MRA_NC_028775: dUTP pyrophosphatase; USA300LVJ_19290; phage(gi971742267)     8.17e-128           StaphylococcusaureusMTNILQVKLLSENARMPERNHKTDAGYDIFSAETVVLEPQEKAVIKTDVAVSIPEGYVGLLTSRSGVSSKTHLVIETGKIDAGYHGNLGINIKNDNETLESEDMSNFGRSPAGIDGKYARLPVTDKILCMNGSYVINKGDKLAQLVIVPIWTPELKQVEEFESVSERGAKGFGSSGV
complement(2080178..2080420)       PHAGE_Staphy_23MRA_NC_028775: hypothetical protein; USA300LVJ_19300; phage(gi971742268)     2.14e-49            StaphylococcusaureusMKINESLKKLKEKGYKENEDKAIFNLADGTLEIYIDHDEKTIITEFHDLKVFVSEDLKDKSMESVMYELAGIDEEDKEND
complement(2080410..2080646)       PHAGE_Staphy_phiNM3_NC_008617: hypothetical protein; USA300LVJ_19310; phage(gi118725082)     4.92e-25            StaphylococcusaureusMNNREQIEQSVISASAYNGNDTEGLLKEIEDVYKKAQAFDEIREAINAQWVEYPEDWASEVLREVRELEYEEEQENEN
complement(2080639..2081004)       PHAGE_Staphy_23MRA_NC_028775: hypothetical protein; USA300LVJ_19320; phage(gi971742270)     3.74e-71            StaphylococcusaureusMNYETGFQIGVMEARLKKMRKQRDEYKKQRDELIGDIAKLRERNEELENMWRTLKNELFGRYEFYRFRLSELQIESRANKEVAIYRRAEINLSVILCRMDKLDGTNEFYEFLGQMEDDTNE
complement(2081019..2081261)       PHAGE_Staphy_23MRA_NC_028775: hypothetical protein; USA300LVJ_19330; phage(gi971742271)     2.99e-54            StaphylococcusaureusMTDNARKEYLNQFFGSKRYLYQDNERVAHIHVVNGTYYFHGHIVPGWQGVKKTFDTAEELETYIKQQGLEYEEQKQLTLF
complement(2081265..2081633)       PHAGE_Staphy_23MRA_NC_028775: hypothetical protein; USA300LVJ_19340; phage(gi971742272)     3.33e-85            StaphylococcusaureusMARKARIVTINDKPYRFTKSEMELIESHGITAGMVSKRVKDGWELHEAMDAPEGTRLSEYREKKTIERLEQARLERKLERKRKKEAELRRKKPHLFNVPQKHPRGRYACYLMENDIFVKVKK
complement(2081646..2082050)       PHAGE_Staphy_phiNM3_NC_008617: putative endodeoxyribonuclease RusA; USA300LVJ_19350; phage(gi118725078)     8.42e-94            StaphylococcusaureusMEIEIKFNEVFNAPMGSPRPRFSTKGRYAHTYMPTKYTEHKKYLQNQMPKLNLENALKIELEFYFTPPKSWSKKKKTQAIGQLKVTKPDIDNLMKTVLDACNNYLWKDDNQITEITSSKRYGIEPKIIIRIEEI
complement(2082059..2082277)       PHAGE_Staphy_phiNM3_NC_008617: hypothetical protein; USA300LVJ_19360; phage(gi118725077)     7.99e-48            StaphylococcusaureusMDAFDKYYLFDHDGNKMFSVTPHFKDGRHLVVGLKHTKFNGRRWYLDDYELKTLIDNEQMELGHQTSLFEYI
complement(2082284..2083177)       PHAGE_Staphy_phiBU01_NC_026016: replication protein; USA300LVJ_19370; phage(gi744692797)     0.0                 StaphylococcusaureusMTGWISIDRSIQNHWLFKEKRTFSKFEAWIYLLMEANHSKAKVPIGNQIVTVERGQRLTSILTLSDLFNWSRFKVKTFLDLLESDGMLEVKTTSKYTLITIVNYDFYQSEQGRNQHQNDIKPTSKQHQSNINPTSKQHQTNTNNNDNKDNNEKNVNNEKKKTTAFDFFQDNGFGFITSYNLDDLNYYLDSFENDSDEIVTASLKIAKDRNKVTWGYAKSILNTWLNANLKSIEQVRAFEKQQLESKKQNYKPFVKQSKEKTPKWLTDSTRETKTPEVDENLEKDREAFIKRLNSKWE
complement(2083207..2083677)       PHAGE_Staphy_phiNM3_NC_008617: putative single-strand DNA-binding protein; USA300LVJ_19380; phage(gi118725075)     1.62e-109           StaphylococcusaureusMLNRTILVGRLTRDPELRTTQNGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTRNYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIELNDDDLPF
complement(2083678..2084163)       PHAGE_Staphy_phiNM3_NC_008617: hypothetical protein; USA300LVJ_19390; phage(gi118725074)     3.31e-117           StaphylococcusaureusMTAGTQQAMNFESHRLCTIKAKQELRIGTWSILPFDIEHDANEPVAFLLQSTLGYKVLYVTDTKYLKYKFNGITHMMLEVNYIYEQMQENIKNGSVHSTLANRIMESHFSLEHAIGMLKANDLTRLEEIHLIHLSSQNSNAKYIKSEIQKVTGAPVYFGGL
complement(2084376..2085296)       PHAGE_Staphy_TEM123_NC_017968: RecT protein; USA300LVJ_19400; phage(gi388570318)     0.0                 StaphylococcusaureusMTENNKLQTIEQQLVQEKNVSDNVLNKVRVLESQGNLELPNDYSPSNAMKQAWLQISQDNKLMSCNDTSKANALLDMVTQGLNPAKNQCYFIPYGNKMQLQRSYHGNVMMLKRDAGAQDVVAQVIYKGDTFKQEMGETGRIKAIKHEQDFFNIDKENIIGAYCTIVFNDGRDNYIEVMTIEQIKQAWMQSSMIKDEKALQNSKTHNNFKEEMAKKTVINRAAKRYINTSTDSNLFKYAQESEQRQRKEVLDAEVEENANQEQLDFEQPVLEEAQYTELENDKPIDVSDFEEIKEPATEKESEEEPF
complement(2085298..2087241)       PHAGE_Staphy_phiNM3_NC_008617: hypothetical protein; USA300LVJ_19410; phage(gi118725072)     0.0                 StaphylococcusaureusMKINKLTISNFAGIKEEKFNFDGKDAKIYGNNATGKTTTATALQWLLFDKGLDGSTKSFNPVPLNEKNEENYELIPTVFAEFEIDGKITTFKKESHPKYTINQKTNRKEYSRSRTKKQYINDESIKVKDYKARIDELIDEDVFKLITNPQAFNLLDWKKRRSLLFEIAKPINDEDVIKTNDDFKELNNILGDHEIETKKKILTDKIKQINKDIKDIPIRINQTQQNKQDVPEFDNDRYAIIKQEIEQLENERIDIQNGKEEINLRNQLADKQSELKRIEDNNSASNENKIHALTNELHVENGTVANLKTRLKQNKQQITHEENRRNQLLENHKGLKSDLEKAKNQKFEYLDDNVCSCCGQKLPVEQVDMAREKALQKFNASKSKELETIQTSINHIISEGKKIKLIIEKLEDDNNNLQIKINEAEERSARIQNKINKLKTTHVDVTQTDEYKAVMLEINEINQKRSNIRKTIQDKVSGIDDKISELTQEKSEIEVSRSIEKSNKHLDDVISELRNEEDRLLDEKEKYSHDLYILKEFTTTKVKMLTENINNEFEIAEFKLFNTLVNGELEETCSTTVNGVEYDSGLNNASRINVGLDIINTLSKHFKVTAPIFIDNAESVTELIKTESQQIQLIVNEQDKKLRMETI
complement(2087250..2087513)       PHAGE_Staphy_phiNM3_NC_008617: hypothetical protein; USA300LVJ_19420; phage(gi118725071)     1.61e-57            StaphylococcusaureusMRDTERNILNIFKTLFDEYTLSNQRALLEIERNHHGYLSINFLHYHDSYKTNNKLVQIHEINPDSHERIKNLIIEVLRGHRKIKKGA
complement(2087522..2087782)       PHAGE_Staphy_phiNM3_NC_008617: hypothetical protein; USA300LVJ_19430; phage(gi118725070)     1.15e-54            StaphylococcusaureusMYYKTGDVCRKIINVDGFDFQLRVKKRAYSVEMVVLDHEGNSIDGLLVSDENDLYTALDILKQSVYEWIENNTDEQDKLMNLVMKW
complement(2087822..2088082)       PHAGE_Staphy_phiNM3_NC_008617: hypothetical protein; USA300LVJ_19440; phage(gi118725069)     3.08e-34            StaphylococcusaureusMTKNYKDMTQDELRGLLAEKNAELFDLASEIDEETEFDVLLFSNVGISNGDFTPSSHCVIGNVVDIANLLKRRAVYRDIADVIKMR
complement(2088177..2088338)       PHAGE_Staphy_23MRA_NC_028775: hypothetical protein; USA300LVJ_19450; phage(gi971742285)     1.03e-30            StaphylococcusaureusMSDTYKSYLLAVLCFTVLAIVLMPLLYFTTAWSIAGFASIGTFIYYKEYFYEE
complement(2088335..2088655)       PHAGE_Staphy_phiNM3_NC_008617: hypothetical protein; USA300LVJ_19460; phage(gi118725066)     1.48e-73            StaphylococcusaureusMPHILNVTVPIPETHVLITKDEYDELIGYSLDPVWNMSDLKKKLKIASDETIKDRLLFHPRFEKELRAQGIVHYPDENFNRWRFNARKMNKFVDEHFNEIYKERIK
2088714..2088944                   PHAGE_Staphy_Ipla35_NC_011612: hypothetical protein; USA300LVJ_19470; phage(gi215401117)     3.59e-49            StaphylococcusaureusMHKRLLTQYLDKEIVTSLDLHLINGEVIKVQEHMKDAESKTLHIIYPKDRVVSLDHVLYFDINVKGEKNNDSPYPS
complement(2088941..2089117)       PHAGE_Staphy_23MRA_NC_028775: hypothetical protein; USA300LVJ_19480; phage(gi971742288)     1.33e-36            StaphylococcusaureusMNEEKLKMILLLLEDIPRDEWNRLVNEVNNQYSYQADKVGLASDNCQQIANNYKHYGF
complement(2089133..2089885)       PHAGE_Staphy_23MRA_NC_028775: anti-repressor; USA300LVJ_19490; phage(gi971742289)     0.0                 StaphylococcusaureusMQALQTNSNIGEMFNIQEKENGEIAISGRELHQALEVKTAYKDWFPRMLKYGFEENTDYTAIAQKRATAQGNMTHYIDHALTLDTAKEIAMIQRSEPGKRARQYFIQVEKAWNSPEMIMQRALKIANNTINQLETKIERDKPKIVFADAVATTKTSILVGELAKIIKQNGVNIGQRRLFEWLRQNGFLIKRKGVDYNMPTQYSMERELFEIKETSITHSDGHTSISKTPKVTGKGQQYFVNKFLGEKQTS
2089936..2090265                   PHAGE_Staphy_phiNM3_NC_008617: hypothetical protein; USA300LVJ_19500; phage(gi118725062)     4.61e-69            StaphylococcusaureusMTNEAKFVLLQLYSIYLDRIDEGMSKRSASYFGSDESSFNAFFLDFNFEDYIDAVLELKHRDFVIASAEDGGFLEMALSREGIAYSESESKKDYKTLMDLIRDLKKLII
complement(2090254..2090469)       PHAGE_Staphy_phiNM3_NC_008617: hypothetical protein; USA300LVJ_19510; phage(gi118725061)     2.51e-46            StaphylococcusaureusMNIQEATKLAMEKGISIRRENQDVYGILPTNLQRYQCLVVSRHYKKKRQTAAGRWQPSADDLIADDWILDY
complement(2090560..2090748)       PHAGE_Staphy_phiNM3_NC_008617: transcriptional regulator; USA300LVJ_19520; phage(gi118725060)     8.88e-38            StaphylococcusaureusMKTLKELRTDYGLTQKELGDLFKVSSRTIQNMEKDSTNIKDSLLSKYMSAFNVKYDDIFLGN
2090881..2091594                   PHAGE_Staphy_phiNM3_NC_008617: putative repressor; USA300LVJ_19530; phage(gi118725059)     1.38e-172           StaphylococcusaureusMNKERNIIIAKNIRKFLNDSNMSQKKLAELINIKPSTLSDYLNLRSNPSHGVIQRIADVFEVGKSDIDTTYKDDNDITSIYNKLTPPRQENVLNYANEQLEEQNSKGDNVVDINSYKQEKTPVNVNGCVSAGVGERLHDETLFTEMVKGPIPTHDLALKVNGDSMEPMFKDGEIIFVEKTHNIKNGQIGIFIIEEEAYVKKVFVEDDRLTLVSLNKDYDDLHFYRNESVRLIGKVIL
2091610..2092542                   PHAGE_Staphy_phiNM3_NC_008617: probable ATP-dependent helicase; USA300LVJ_19540; phage(gi118725058)     0.0                 StaphylococcusaureusMKKYDIAVLDFETMNEHMNSPCEVAVSLIKDLSIVKVYSSYINPPNNRYNLKNAKIHKIPEDVILKAPKYPDIYQEILYLLKESHLIIAHNALFDISVLKNTNNYYDLPVPNFMYVDSINIFRSFHAISSFKLENLCSLYDIDKEKLHSAKFDVLALSKMLISLAKNNQHYSVLKLIHYMPKQYIRFSKYSNSPTKLFDSGFQKIHMKISEINKIEVESVIPILKDKNVVFTGNFDTEKQDLMILTRKKGAYIRSDVTAKTDILVEGVQDDKYKDVNGLVSKQRKAREYVGNGAKIQFLNEEDLINLIKE
2092548..2092889                   PHAGE_Staphy_phiNM3_NC_008617: hypothetical protein; USA300LVJ_19550; phage(gi118725057)     7.60e-74            StaphylococcusaureusMIKKIFTKKHVFLVIEDENHNHSDAVFGKSILLSIYVGVNKKTNSKSGKFIYLDRSKRIVRQSDITKIESANENDVDFYNLLKKEKEIVYSKNIVDKYNLANYIIYYEVSTKE
2093093..2093275                   PHAGE_Staphy_phiNM3_NC_008617: hypothetical protein; USA300LVJ_19560; phage(gi118725056)     1.07e-37            StaphylococcusaureusMKITNCKIKRETVIYEVLTSGNQPFTYELPKDLSSHNARKYLEFISQKIDGDKLTKEDSL
2093353..2094066                   PHAGE_Staphy_P954_NC_013195: hypothetical protein; USA300LVJ_19570; phage(gi257136358)     1.45e-167           StaphylococcusaureusMTHNIEKRINKLKTSGNPKFKKLDSDIHYLLKRFEGEKNHKGFYPKFKQGEIVFVDFGINVNKEFSNSHFAIVMNKNDSNTEDIVNVIPLSSKENKKYLKMNFDLKWEYYLRLFLNLISAQNNSAILKEVFDKKYQKNNTEFITKDYFSEFISDSLEIENKLNKIDRNINNIVSAIDKVKKLKGNSYACINSFQPISKFRIRKVLPQKIKNPVIDSSDIMLLINRINNNILQIPDIR
2093893..2093905                   attR                                                                                 N/A                 AAATTAAAAGGTA
2094257..2095294                   PHAGE_Staphy_phiNM3_NC_008617: integrase; USA300LVJ_19580; phage(gi118725054)        0.0                 StaphylococcusaureusMKTRCYDGKKWQYEFKYEGKRYRKKGFRTKREANSAGLDKLNELRSGFNIDNYITLEEYFENWIKTYKQPVVKENTYRHYRNALQHIQKHKIGKMELSKINRQVYQKFINDYSKEHAKETIRKTNGAIRSALDDALYDGLIFKNPAYKVNYKAGKPTKSEQEKFISVTEYEILKDHVRKKRTRSSLALFIMICTGCRVSGARNIKIEHINQVKNTIFIDERKTDTSPRYISIAKSDMKHIMDVISTFAISYDGYIFKEAGSIINLHAINNALKSACRVNNIPIITSHALRHTHCSYLLAKGVSIHYISKRLGHKNIAITTSVYSHLLEEKFNEEDKKTTKILESM
2095351..2096175                   sphingomyelin phosphodiesterase; USA300LVJ_19590                                     N/A                 StaphylococcusaureusMYPNWGQYKRADLIGQSSYIKNNDVVIFNEAFDNGASDKLLSNVKKEYPYQTPVLGRSQSGWDKTEGSYSSTVAEDGGVAIVSKYPIKEKIQHVFKSGCGFDNDSNKGFVYTKIEKNGKNVHVIGTHTQSEDSRCGAGHDRKIRAEQMKEISDFVKKKNIPKDETVYIGGDLNVNKGTPEFKDMLKNLNVNDVLYAGHNSTWDPQSNSIAKYNYPNGKPEHLDYIFTDKDHKQPKQLVNEVVTEKPKPWDVYAFPYYYVYNDFSDHYPIKAYSK
complement(2096413..2097429)       PHAGE_Staphy_phiPV83_NC_002486: LukF-PV(P83) precursor; USA300LVJ_19600; phage(gi9635737)     2.25e-64            StaphylococcusaureusMIKQLCKNITICTLALSTTFTVLPATSFAKINSEIKQVSEKNLDGDTKMYTRTATTSDSQKNITQSLQFNFLTEPNYDKETVFIKAKGTIGSGLRILDPNGYWNSTLRWPGSYSVSIQNVDDNNNTNVTDFAPKNQDESREVKYTYGYKTGGDFSINRGGLTGNITKESNYSETISYQQPSYRTLLDQSTSHKGVGWKVEAHLINNMGHDHTRQLTNDSDNRTKSEIFSLTRNGNLWAKDNFTPKDKMPVTVSEGFNPEFLAVMSHDKKDKGKSQFVVHYKRSMDEFKIDWNRHGFWGYWSGENHVDKKEEKLSALYEVDWKTHNVKFVKVLNDNEKK
complement(2097451..2098506)       PHAGE_Staphy_phiPV83_NC_002486: LukM precursor; USA300LVJ_19610; phage(gi9635736)     2.63e-46            StaphylococcusaureusMKNKKRVLIASSLSCAILLLSAATTQANSAHKDSQDQNKKEHVDKSQQKDKRNVTNKDKNSTAPDDIGKNGKITKRTETVYDEKTNILQNLQFDFIDDPTYDKNVLLVKKQGSIHSNLKFESHKEEKNSNWLKYPSEYHVDFQVKRNRKTEILDQLPKNKISTAKVDSTFSYSSGGKFDSTKGIGRTSSNSYSKTISYNQQNYDTIASGKNNNWHVHWSVIANDLKYGGEVKNRNDELLFYRNTRIATVENPELSFASKYRYPALVRSGFNPEFLTYLSNEKSNEKTQFEVTYTRNQDILKNRPGIHYAPPILEKNKDGQRLIVTYEVDWKNKTVKVVDKYSDDNKPYKEG
