gi|00000000|ref|AP025968.1|  Campylobacter jejuni THJ026 DNA, complete genome. 1886229, gc%: 30.13%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(587381..588538)         PHAGE_Escher_vB_EcoM_ECO1230_10_NC_027995: putative phage tail protein; THJ026_06280; phage(gi937533289)     2.56e-58            CampylobacterjejuniMQDEFLSLGNVIRGGIIGKGLGEAISFESAMADVRKVVNFDEGDDIKKMSADILKMSQTLPVTANELAAIAAAGGQIGLGSKDVREFTNLVTKMKVAFDMSAEDVGDSVAKIKNILGISLKDMEDLGDSINNLSDNSASKAREIIDVMKRTAAAGKQIGFTKEQIAALSSSFISLGKGPEVAGTAINSLYRVLATADNMGTKTESAFAKLGISGAFLKQASFDDPQKALDMFLQRISKLDQKEQMGVLVDIFGREFADDMATLVGGLDTYKEALKNAGDEAKKGSLQREFDTRAATTENSIILMKNAFNSLAVNLGSVFLPAISWVSAGISYLVNSITYITGLVPGLNGVLGGLIATFCSPNLQSWLMLLLKTILKIAPFYLKVL
complement(589204..589443)         hypothetical protein; THJ026_06290                                                   N/A                 CampylobacterjejuniMKEKIIKLENGEELKMREPNVRVLKNATNKGEKEMEQTICMIAALTNKQESEIEDLNLKDFKALQDALKDFLVEAGVIA
complement(589790..590104)         hypothetical protein; THJ026_06300                                                   N/A                 CampylobacterjejuniMKRIIGEVIQEGNIYIDGQGYLGVVRNLKLPDIEQEMIETKGVLGANYSSGVLKPLEISFKLAVVDPVLYAAFFHTTFSEIKAPLLFRESVHKGGKTMVLVLSF
complement(590131..591324)         PROPHAGE_Xylell_Temecula1: contractile tail sheath protein; THJ026_06310; phage(gi28198986)     3.16e-22            CampylobacterjejuniMAANYGVNFNISNGAASPIKVQSDTPIGIAASLKGASKEMIYTKAGYESVEAMPIFAFSNVNKAKEFVNDLIKENNLQDFRLLDTLECINLQNVSNVIIVSFFEESEESENTLTNIVNAIEAFKKAKHKTGFSPDLIITPYYSHEAGVKAKLESVASSMNITAIVDLYATNVGEAINTMEAFSSKRLIATWPQVQILNTQGKYAYVPQSPIIAGLIAHTDGDKEYGFSDSYSNRVMNGVTGTEHFIEFINGFDCDAERLRNAHISTCILGEGYRSWGGETSHEDTIWQDLARVRTFDRIALAGQKAAFKAIDKKASELYFIKISIEELLRDLKGAKVLIGYEVSWDEERNTDANVSAGKFYLNIKMMNNPIVKQITLEFIYSDKWASDLIKTISADS
complement(591536..592348)         PHAGE_Campyl_NCTC12673_NC_015464: hypothetical protein; putative tail fibre; THJ026_06320; phage(gi332672358)     9.35e-24            CampylobacterjejuniMKDYGISFIPDINQGSKEPSEPIVSDKLNAQKVNELIDKKLKLFKEELVNKEELKSLIEEILQDQNFQNTNIKISKTPPNYNTQAKVGEIWAVLESKKQLFICTANDNDFTSWVDLLGDGSNDIIPKEKIIITFDNTTTGGQYGGCMSDLRLGFENGFATPNKVQDEYENAKFTMTKDGNGLNRSDFTIDSNPTPTDNQIVGTIKTSGIYQETYHKIAHMFKKYNGGADECCLWSSSGSREVSIELENTPMPNKLLLGVMDIMVKQKLPM
complement(592448..592819)         PHAGE_Pseudo_Bjorn_NC_042103: head morphogenesis protein; THJ026_06330; phage(gi100068)     1.97e-10            CampylobacterjejuniMTKTELKRVCVKPYDKDRFEVISDYAFSLPNYKGIVPQGFKTDGASIPRLFWSLFPPFKSEYFSACVVHDFLCEKANSRTDYRTADLALKEAMTLLGCSRLKIFVFYHSCNLYHAIKCLIKGK
complement(592816..593322)         PHAGE_Campyl_CP220_NC_027997: hypothetical protein; THJ026_06340; phage(gi937457381)     1.28e-21            CampylobacterjejuniMKYFIDKNDNNQIYAYEDEVSDEQIKTGLTPISEEEFNSLINPPKSEEELLNEAKELKINEINTKKENILNGGFSFKGKIYQSSNEDQLRINGAVTNALVNPNLIPYIDWIALDNSTTRFSVEEFKLFASSMAYFVQETIFKASALKEKARNAQSKEELDLIVWESEK
complement(593347..593652)         hypothetical protein; THJ026_06350                                                   N/A                 CampylobacterjejuniMGVNQAWQNVSRAFDVTYTNNTGKPIAAKFQVNASASGGISFSCSEQFVVSMFQTSLSNGGVSRTYFGFGIIPPNGQYRLNTPEHSGFYPSKSIVSFMELR
complement(593826..594377)         PHAGE_Pseudo_PPpW_3_NC_023006: putative tail-collar fibre protein; THJ026_06360; phage(gi564292496)     2.02e-31            CampylobacterjejuniMAKSEYYTILTKIGIAKFIAARASGNGINLKSFKLSSKVILPSEEMQSLEEIVYEANISSKSVDESNPNYVNLMCHVPSDVGGFEVNAVGVYDEAGDLLAVGNVPRTYKPILKEGSAKELMIKIVMELSNAEEVILKLDPSVIMASRDYVDAIKVELNLKIDALTQKYDAEFKKYGMSFLNIF
complement(594377..594997)         PHAGE_Pseudo_PPpW_3_NC_023006: putative tail protein I; THJ026_06370; phage(gi564292495)     1.50e-13            CampylobacterjejuniMNTLILNHHPKQSKAIDLSAKTRFEDLNLASITNLALNCDERLLPILANAYDVSIDGLNEKESRKLISKALLLDRYNGTTWAIKEALRAVFPTAVVKEWFNYGGKPYFFKVKVSTTNVSFDERTLNTLERLIYDFKNVRSVLEAIEIEIESKNDSFNANAQISGETIEILPFQTTFLENEIKSTKNAFGVFMCEISRTNIDFKGVY
complement(594994..596160)         PHAGE_Pseudo_PPpW_3_NC_023006: putative baseplate J-like protein; THJ026_06380; phage(gi564292494)     5.25e-15            CampylobacterjejuniMSELLSVNDSYFKQSFLKDIPYPQIIEELDYEKLLKAYEELFKSFLKDNVELLESDPFKAILEALAYREMIIRARINESIKATYLHYAKGSDLDNVVANGYLIERLKGVKPTAKVEFELNTLLTYDVIIPKGAIFSNEKADLATLKEEVVIKKGQSKAQGILELDEFIQSKESKTEFLQTPLPFVAKIKQLEFFKGGASEESDEALRERAIMSVHRFSTAGSEKGYIYHALSASAKVASIKALNNGAGKVRVIIKSEDELSVDVVKEYLSADERRPLTDEVSVELAKKREFIVDAKLLLLELSRANEISEKINALQKDFDLSVDLALGFIYKCLHQDGVYKSEILSIKEKIINEEEQELKDLPLENIIIADDEFATLSFSLSYEKAVL
complement(596258..596446)         PHAGE_Entero_Arya_NC_031048: hypothetical protein; THJ026_06390; phage(gi100012)     8.08e-12            CampylobacterjejuniMNYMVSIEESIKDILITPLGSRVMRPEYGSLLYTLIDRKIDDDFKIKLTRYTAEAISKWEKE
complement(596642..597160)         PHAGE_Pseudo_PPpW_3_NC_023006: putative baseplate assembly protein V; THJ026_06400; phage(gi564292492)     1.00e-17            CampylobacterjejuniMSFSPLRIGEQVLVIPVRGDLNSGVILRGLYQEKHRAKNTDENTFNIDFEDGTHLEYNSKSSTLKLDVVKNINITCVDKNTHNQNNTLNTKNHTTNANTITLNAPSINLNGNTQIAGAISTSGEGGASGTFSIKGNLNLIGNLQVSGNISDSKGDLTNHTHSCTCGATASPR
complement(597273..597587)         hypothetical protein; THJ026_06410                                                   N/A                 CampylobacterjejuniMKLEDIFVYMVLMIVSFIAGLVGIVTKNKLSKALNLKGKFTLFLKGMLGSMFVAYLVFEIVNYLNFGIKLSVAVGGFAAYMGTDALLKIEQLVEKLINKKMEKL
complement(597699..597947)         hypothetical protein; THJ026_06420                                                   N/A                 CampylobacterjejuniMNDKMRIFLLIIPFVFLSACASKDILIKTEIKEVKVPIKCPLKLPLKPLDKKDLESAKEISKYYLEVENIAKLCTGEKDERK
complement(597944..598150)         hypothetical protein; THJ026_06430                                                   N/A                 CampylobacterjejuniMHFSNEINVFKDKLAQQNKAIDKLKLDLKPKETLKEVLKVDKVFIKDKSCQSELKAYKELFNILGAKK
complement(598256..598687)         PHAGE_Pectob_PP1_NC_019542: peptidase M15A domain-containing protein; THJ026_06440; phage(gi423262089)     3.18e-26            CampylobacterjejuniMKNNPYFKESEFKCKCGKCELPQNVPSDELIDILCEIREHYNAPIIINSGYRCKEHNAEVGGAPKSQHTIGSAADFVVKGVKTEEVHQYVLNTYGERSLGIAIKHNFNDPYAGFVHLDTRGKKSKMDLSIRKRLCLVLFYQGF
598836..599270                     hypothetical protein; THJ026_06450                                                   N/A                 CampylobacterjejuniMLKSFENELLELLKDFKVRMYLGEFEDTQNIASCINNLDASLLLDFEGESYKDLENKVGTWKLYILTHTKSKAPKHRIDAKHKLFDAIEAVDKVLLNAEPSNGFRIELKDLKKVYEGISDHGYLSIYARTLQSSFLPKDDFLRI
599272..600087                     PHAGE_Faecal_FP_Mushu_NC_047913: hypothetical protein; THJ026_06460; phage(gi100029)     2.92e-34            CampylobacterjejuniMLFINKENLVEVSNDKPIKVAIKGEWKGHNNGRFKVDDKDLNSMIDNFNQKKIDLVIDYEHQSLKNEKAPAAGWIKELYLENDALMAKAEFNEEAKKYIANKQYRYLSPVFEFNSKDNKSGELVRAKLHSVALTNTPFIDELGELIANKNNIHQNKGEKMDEKIKELESQIIALKNENSSLALQNEALKKQNEESVKNLASSLVDNALNSGKIANSQKEWALMYACKDLEGFKSFLDTENDQVQVPKNNVFANKNTAKTNEFDVVKMMLGD

#### region 2 ####
602845..603105                     PHAGE_Pseudo_LPB1_NC_027298: putative large subunit terminase; THJ026_06520; phage(gi848469604)     1.39e-07            CampylobacterjejuniMQRKDFLEWMDELKNELKTQFLHESHLDPTLKEERIKRASVDFDYFARTYFPHYFTIKGECGLHLHLNEVFTKIALKKKVKVKNTP
603156..604154                     PHAGE_Pseudo_DMS3_NC_008717: hypothetical protein; THJ026_06530; phage(gi119953651)     7.73e-77            CampylobacterjejuniMWCLVFNYKSFIVEISDAVELMEGMLEAIKAELEDNPHLKLDFPEVVGIGKTWRVGEFVSNNGVKIKAFGSGKRLRGVRYGVKRPDLVILDDLENDTNVRSKDQRDKLEDWVDEAVLNLGSADGSLDVLYIGTILHNDSVLSRKLKLGFWNPKVFRSIEEFPQRLDLWDEYAMLYRNADFNTAHQFYLKNKVLMDKGAKVLWKEAKSLEDLMKLRAENLKAFNKEQLNNPRSENQIFSLDGINFYDDLPAINQYYMYIDPAGEKAKSDFTAITIIGKGAKGFYVAESIVKILKAQSIIKTIFNLQKIYKCRLIEIETNGGQFFLKKWLQEKA
603813..603824                     attL                                                                                 N/A                 AAAGCTTTTAAT
604133..604426                     PHAGE_Pseudo_DMS3_NC_008717: hypothetical protein; THJ026_06540; phage(gi119953651)     1.46e-09            CampylobacterjejuniMVTRKSLESGVFLPLRGKNNSVSKFERIESLSLAFENEELFLHKSQTMLINQLLEFPEGKNDDAPDSLAGAFLLARTKSSIKRRKHHFNSVSRIRRF
604436..605032                     PHAGE_Burkho_KS10_NC_011216: hypothetical protein; THJ026_06550; phage(gi198449265)     3.00e-07            CampylobacterjejuniMKKEIKSKREVILKNNSLINTLINSSYLNVLKISENDQKMIFKDLSFTQAHQSRRSVILAKELQIVCENEKIKESFEYLFNPDLLSQILETYLYGLNVFEVNYKLKDGFYYPILKQRDFRNFGFNENDELVYNGNGCEEIVEDKKAIYGLFGSNFLFKNGDALLTKLYFPVKLKNASLKFWMEFLERFGSPWAVAKTR
605016..605414                     PHAGE_Faecal_FP_Mushu_NC_047913: hypothetical protein; THJ026_06560; phage(gi100027)     3.37e-07            CampylobacterjejuniMQKRDSDPDALASEIHQMLNGDSAVIDKEEELDLIQPKAKANYNEIIDYLDNQIRSVVLGANLSSQVSGGSLAAAESHNQIRKDLAAQDGQIVLFILNRAIKFFKEINHFKDELYVQFLAKQNQKVSFAKGI
605426..605806                     hypothetical protein; THJ026_06570                                                   N/A                 CampylobacterjejuniMGFCFDEEYIKNTYNVEGELIREILEKKDFKDLENDKKVFENKVKLESFEEDFIDKGLEQKEYLKVDESMSKFFQEQFESIVKDCKDFNEALNKLKENFSSLEQSEFEKHLFIALNNSSILGYLED
605808..606506                     PHAGE_Pseudo_DMS3_NC_008717: putative virion morphogenesis protein; THJ026_06580; phage(gi119953653)     4.94e-27            CampylobacterjejuniMTGAKIGFFSEPTKAVDFLKNKKPELSFDYDELSYSTHKKVFTIAKLMDESLLKDMQDTLVNAIKNGDKFSTWSKIAEEKLKAKGWWGSKEVINPKTGEVKKTHFNSARLKKIFEENSRKAKAKAIYENQMKSTKPYFKYCTQKDSLVRDKHRAFDGIVLHKDDPFWDSHYPHVTMHDYGCRCYVLEVGESEVKGLKIPPSNAKESEFNGFNDEELLDELYKQKTLKSFKTL
606515..606934                     hypothetical protein; THJ026_06590                                                   N/A                 CampylobacterjejuniMLSAAAKKTKEVKSFTHQKELYTWQKSLDDMVDEVIIKDNQKYPINFIQVGKMDKSTKEFLEKLNKKDLEDLYFALSKNNLLHASPKRKASYNQALSVDEIKQIVKVLDEAKEVYWDNANNSLLYFFEDKKMLVVSIKL
607170..607544                     PHAGE_Ralsto_RsoM1USA_NC_049432: hypothetical protein; THJ026_06600; phage(gi100031)     5.48e-11            CampylobacterjejuniMVLALGEFEFKALNFDNLERSLEYNIQSQNRLNNHNALFASSKESEKIKIQGKTLPLKGDRNTYLDKLENMAKEQRSFILTGANGKYYGKFVILSLNENRSAFVDGSGFVAQSFSMDLERDFDE
607537..607728                     hypothetical protein; THJ026_06610                                                   N/A                 CampylobacterjejuniMSKIYIAKNNERLDSIVYKHYGTLLYFNQVLLANPRLEPLLKTGDKVILPSIEIKESKEKALW
607722..608699                     PHAGE_Salmon_SEN8_NC_047753: holin; THJ026_06620; phage(gi100034)                    6.09e-22            CampylobacterjejuniMVRKPKFKLIAKGEDITEKLSKNLISISYEDKEKAESDEISLSVFGLYSKPLFGDSLELWLGFEKLYKCGSFSVNVVSKNYTSNTTEVRASAINFSGKGSVNIKEKKTRSFENTTLFTIARKIANENNLKIKTSGEDQNIVSILQNNQSNLEFLYSICFDYGFICCVKENTLIITPKDGKIGDNAANITSKNENLPLFEIALKECISLEISESARNEYSAVIAEWQDINEAKIKSIKVGSGENIYKMQISQPKNDNEAFKKAQAKLNELQKGGLNGRCELIGHEIRAGGKLKIKDINMDHYEFSIKSVSHSFNDQAYIISVEFES
complement(608696..608980)         hypothetical protein; THJ026_06630                                                   N/A                 CampylobacterjejuniMLSNNEYFEYFIDFVKNNDKREILKEFGGANIYIPSYKTLLRDEELKQDFKTLIKQGLTTKNASLECAKKYDLSLNAVYLITKELRENLEPSLF
609074..609634                     hypothetical protein; THJ026_06640                                                   N/A                 CampylobacterjejuniMKKIISVLILALSLLNAKSFEESKKELVKFYNDLGSSYWYDFYCQAPFKVNKKGKYISFEVIKSDLYAPRNEYTKKGKINQRIKRIEWEHIMPAQNFGKHLPCWKEGGRKACKNDPTFAKMESDKQNLVPAIGEINGDRSNFRYAEAPTNLKYTQYGIVRFILILKQKDFILQIILKAGLQEAIYI
complement(609736..610011)         hypothetical protein; THJ026_06650                                                   N/A                 CampylobacterjejuniMILEIHSYDAEFFLTLGIEKHSQIAFAAKRTSLEIMHNGITHQIKTDKDFGILLNVICVIRERIDESFEEEDKSLVIDIDEIVAKVCKELE
complement(610058..610507)         PHAGE_Burkho_BcepMu_NC_005882: gp02; THJ026_06660; phage(gi48696912)                 7.35e-06            CampylobacterjejuniMNTQNTLKKHLIKIIHTLRKDTNLSDDESYRWVLNERYGKASSKDLSIDELRDFAITLGYDEKFLKKQNTKKARYFKKENTKSGRATKKQLNMIQAIWSKNAKNPTQWALREFINNIVKKRPLHLWYLSIEDANKVILGLKNLENNSTH
complement(610620..611012)         hypothetical protein; THJ026_06670                                                   N/A                 CampylobacterjejuniMCAFAELDLNLRYKNIESFLEWLFISFSNRFIFQTKKGDFSYSFVLRYYDGNIVYDELGKPVLKHVDCGDNLYFINANKELCDEQRKPLNVGEFYNKLVEYMFKNQDKIIFDNKIEISPVIKTQILAKLK
complement(610985..611194)         hypothetical protein; THJ026_06680                                                   N/A                 CampylobacterjejuniMDNAKEALKELFGISEVQAVVIEKLYFKAKTPKDILGFKKYYDLTMLKNNLLAQVMRNFPLCVPLQSLI
complement(611194..611463)         hypothetical protein; THJ026_06690                                                   N/A                 CampylobacterjejuniMKFNPPSKEDLIKAIDEFNAKNSCSIPYFIADSFINYYKQDDGRWLMANKKPLKCWKRALNSTWLPKLANKYKNKDKQKALASWLEEEF
complement(611460..612422)         hypothetical protein; THJ026_06700                                                   N/A                 CampylobacterjejuniMNLDFLNEFKLKNKDLNEKLEFLIPDFLVKKAITIIYANGGSGKSYLSAAISKTLCKDVRVKSIVYIDMDNPLNVLNERGFSELILNESKFTYIHRSSLKTSAYELLEMIENKGVAGSYEGVFFVLDSLRNFADIDNDTKMMSLMSLLMNLRECGATIIALHHSTKDGRAFKGSNHIRNSSDCMYFLQKVANLEQGFEVLLSVQKERAGIKDQAFFINTKTLNIKNTDLQNAKISDKEEAFIEKVLKLLKEKSLSTSEILSALDVSRSDNFSRNTLEKFKGVFWESELGGENGRTFVWKSLKADNKDSNDKELSLFGDEL
complement(612534..612950)         PHAGE_Lactob_Lb_NC_047983: hypothetical protein; THJ026_06710; phage(gi100031)       2.22e-11            CampylobacterjejuniMKLQDFDFRIWDEDNEEFYKNPSIFKIKQIKGPHNVVLSSYSDNERINFEGYDRKFEVELFTRLYDKNGKKVYENDIVKAKNPFNYLEAKISIHKEGTFYLENKSGHYMGSLIYLVEDEGYTIEIIGNIHENPELLKC
complement(612947..613219)         PHAGE_Campyl_CP81_NC_042112: hypothetical protein; THJ026_06720; phage(gi100081)     2.69e-16            CampylobacterjejuniMYVNVSIDASDLEDFYAHDLAELFEDLSTKEQEEFFGIIHKDIKPLERIRAILSNLSNDEALKLLKELNNEFKSDEEWQKTIKSINGGNK
complement(613283..613495)         hypothetical protein; THJ026_06730                                                   N/A                 CampylobacterjejuniMRELSLATFKLLNSVFKTKTAHFNGFLELDFKNKPKLKKQSFKRKKKMTSKQKIRFKERLQSKKIRLKRI
complement(613492..613977)         PHAGE_Faecal_FP_Mushu_NC_047913: hypothetical protein; THJ026_06740; phage(gi100015)     3.71e-23            CampylobacterjejuniMQINSFKDVNLALKKVAELSVQIEKINGEVTLACNEIKESRAGEIKVLSDELGYIEACITTFCENNKHEFAEKRSKEFTFGKIGYRLSKSVSLPRVKEKLESLIKAFKSYGLNECITYKEELNKEAIVELEDSTLVKLGLKRVTKDNFRIEPKIESLEIEK
complement(614086..614424)         PHAGE_Faecal_FP_Lagaffe_NC_047911: hypothetical protein; THJ026_06750; phage(gi100051)     3.34e-05            CampylobacterjejuniMPLVYIASPYKGLAVQESRRKSLAISVAEQECLKIIRECEDFTPISPILQFSYLEENKHRDKALQMGRELLKACDYIYLSKHKDAKNSTGMQEELALAKKLGIKELTLELPL
complement(614519..614704)         hypothetical protein; THJ026_06760                                                   N/A                 CampylobacterjejuniMTTMIKGEKADYSASLFEVKGAGIYFKKSGTFVDVLKGIYPDYIAQKILNFHLNKKLNKSA
complement(614688..614891)         hypothetical protein; THJ026_06770                                                   N/A                 CampylobacterjejuniMTFEEIAKELGISLTRVHQIYKHAIKKLRSPKNKDKWLAIFETLDLIEQEKTKRNNLIQGVDHDNND
complement(614894..615817)         PHAGE_Haemop_SuMu_NC_019455: phage transposase; THJ026_06780; phage(gi418489040)     2.11e-28            CampylobacterjejuniMELVELTKKFLSTQNISQNNLSDRLGINKSYMVGYMKEGSSYKYASKVEPLLEKYIKSFVEEKSVKELQTPFIATKDAKAINVTIESAMSNREMGVIIGEAGTGKSRAIKEYAAKNGTRVVLFEATTETSKRMLLVGLENKLNVCFKGSLDDKIRGIASELARTSKVLIIDESEHLPFRALECLRRIYDFSNTALILVGIRKLKNNLTGIGRNDYNEYGQLSSRIGAKWELKGLCYQNKEGLKNEDLKTLCSYFNIEDKKAIDLVFNLARGNFRKSEKLLKRACEFADGKAVELKHIEAAASFLMLG
615641..615652                     attR                                                                                 N/A                 AAAGCTTTTAAT
complement(615887..617959)         PHAGE_Ralsto_RS138_NC_029107: integrase; THJ026_06790; phage(gi985760913)            3.49e-14            CampylobacterjejuniMYFLETKEAAQAFNVSTGALRLAASRNSNKYEWLKVDNEKGGRGGKKLLFKISKDKLLTAFNQELITKNTLIYDEKMQKVKLSEIITTDNLKTINNSLKTSNLNLTESKINDDLAVLNLKFENLSDEIKNNAREKLKALKQVEKYIEGGLTLKRALFLCNVEWRNYSNWRSDYKKYGILGLVDTRGLHRKDKTKLSAWMQEYALREYRTFGAGGFNFTELWWQIHKEAATKENYDFIGFDLGEVKPLFSVKTLQNFIKNYYKDKPLEHCIITQGLDRAKSKFLPAQGNQRELYDMKNMCWQIDSSPADIIVRDDETLEPFRPHILSVVDVFSGMGVATLVSKSNSLSLTRLLWKAIDKFGKPDMIKGDNGKDYLSKDFQSLLDGLNITYDAAIAYAGEQKALVERRFGTLQHAGISKMHGHIGNNLAKREMIEQKTPKKDRRAKDEYGFAKKTNQKLLLTFSEACEFLEAEVIKWNMSKVRRKKGIKTPLELWNSCDRAIVKISYEEFLFNAGNKELRVVGKKGINFESRVYKSALMPSVGTRVKCVQNIDNIKELFIYDLSGNFLCLALDESIAKLSKESYKMLKKGYESEVKAIKEVLKKDEIAAFTKLNIKQDLQDLQSAFENSLVEAKEVHQKSLAKEALKTQRELEEIKNNANADELILNAKKEINNNESEFDMEAFVEKKYFAG
complement(617959..618159)         hypothetical protein; THJ026_06800                                                   N/A                 CampylobacterjejuniMIKAYFENNAINVKAFARTHNISYDILHRIIKGEITGERNTKGSTKAVFKKLLELGIINELPQGLK
618304..618936                     PHAGE_Shigel_SfII_NC_021857: CI repressor; THJ026_06810; phage(gi526244671)          8.28e-15            CampylobacterjejuniMTANDFKQIREKLGLTQEQLGNKLNLTRQQIINIEKGKTPISKKYFDNISKLSKKFYIDKEENALNKDRNKQEINFYSIPKLNISASAGGGNELIGLEEYETGEMLELSKAFFKTTPKNVKAIKVDGYSMIPMLLPDSWVIFEEIHEYQGDGLYILNFDNQLMVKLLQLDPISKVLDIISVNKDYKSYSLDLKDSQVEIIIQGKVLRSII

#### region 3 ####
complement(1121978..1122352)       PHAGE_Ralsto_RsoM1USA_NC_049432: hypothetical protein; THJ026_12150; phage(gi100031)     5.48e-11            CampylobacterjejuniMVLALGEFEFKALNFDNLERSLEYNIQSQNRLNNHNALFASSKESEKIKIQGKTLPLKGDRNTYLDKLENMAKEQRSFILTGANGKYYGKFVILSLNENRSAFVDGSGFVAQSFSMDLERDFDE
complement(1122478..1123716)       PHAGE_Pseudo_DMS3_NC_008717: putative virion morphogenesis protein; THJ026_12160; phage(gi119953653)     5.19e-26            CampylobacterjejuniMTGAKIGFFSEPTKAVDFLKNKKPELSFDYDELSYSTHKKVFTIAKLMDESLLKDMQDTLVNAIKNGDKFSTWSKIAEEKLKAKGWWGSKEVINPKTGEVKKTHFNSARLKKIFEENSRKAKAKAIYENQMKSTKPYFKYCTQKDSLVRDKHRAFDGIVLHKDDPFWDSHYPHVTMHDYGCRCYVLEVGESEVKGLKIPPSNAKESEFNGFNDEELLDELYKQKNTEVIQNFIKLDMLSAAAKKTKEVKSFTHQKELYTWQKSLDDMVDEVIIKDNQKYPINFIQVGKMDKSTKEFLEKLNKKDLEDLYFALSKNNLLHASPKRKASYNQALSVDEIKQIVKVLDEAKEVYWDNANNSLLYFFEDKKDASRINKIVITPDYKLKKFGKTNAIVTLGKVEVINKDNKTYIKIR
complement(1123718..1124545)       PHAGE_Pseudo_B3_NC_006548: portal protein; THJ026_12170; phage(gi56692600)           1.32e-07            CampylobacterjejuniMEFLERFGSPWAVAKTDSDPDALASEIHQMLNGDSAVIDKEEELDLIQPKAKANYNEIIDYLDNQIRSVVLGANLSSQVSGGSLAAAESHNQIRKDLAAQDGQIVLFILNRAIKFFKEINHFKDELYVQFFSEAEPKSELCERDLKLFNMGFCFDEEYIKNTYNVEGELIREILEKKDFKDLENDKKVFENKVKLESFEEDFIDKGLEQKEYLKVDESMSKFFQEQFESIVKDCKDFNEALNKLKENFSSLEQSEFEKHLFIALNNSSILGYLED
complement(1124596..1125087)       hypothetical protein; THJ026_12180                                                   N/A                 CampylobacterjejuniMKKEIKSKREVILKNNSLINTLINSSYLNVLKISENDQKMIFKDLSFTQAHQSRRSVILAKELQIVCENEKIKESFEYLFNPDLLSQILETYLYGLNVFEVNYKLKDGFYYPILKQRDFRNFGFNENDELVYNGNGCEEIVEDKKAIYGLFGSNFYLKMAMPY
complement(1125097..1126767)       PHAGE_Pseudo_DMS3_NC_008717: hypothetical protein; THJ026_12190; phage(gi119953651)     6.74e-119           CampylobacterjejuniMLFSKEELDEFLISNEQKHENTPNELKGAMQRKDFLEWMDELKNELKTQFLHESHLDPTLKEERIKRASVDFDYFARTYFPHYFTIKGECGLHLHLNEVFTKIALKKESKGEKHAIAAPRAHGKSTYTSQLFPLWCLVFNYKSFIVEISDAVELMEGMLEAIKAELEDNPHLKLDFPEVVGIGKTWRVGEFVSNNGVKIKAFGSGKRLRGVRYGVKRPDLVILDDLENDTNVRSKDQRDKLEDWVDEAVLNLGSADGSLDVLYIGTILHNDSVLSRKLKLGFWNPKVFRSIEEFPQRLDLWDEYAMLYRNADFNTAHQFYLKNKVLMDKGAKVLWKEAKSLEDLMKLRAENLKAFNKEQLNNPRSENQIFSLDGINFYDDLPAINQYYMYIDPAGEKAKSDFTAITIIGKGAKGFYVAESIVKILKAQSIIKTIFNLQKIYKCRLIEIETNGGQFFLKKWLQEKSLESGVFLPLRGKNNSVSKFERIESLSLAFENEELFLHKSQTMLINQLLEFPEGKNDDAPDSLAGAFLLARTKSSIKRRKHHFNSVSRIRRF
complement(1126767..1127366)       hypothetical protein; THJ026_12200                                                   N/A                 CampylobacterjejuniMAKNLTSTTKPKMAKVGCGLQVGAESETPARKDKFTSSAKSQNNLKDLAKELYIAGFDIFKIAKILNRNEKTIRNYKAKDGDWDKQKANLLTSKIKDKESASLYESFTEQMFCAIENINTDEKMNAEKKTEAIARIGDSFSKMRKVARLEDPSSYRLNVAKKVVEIIISHLKNDKDCVAKLVSLLESGVIEKEILAMDI
complement(1127359..1127817)       hypothetical protein; THJ026_12210                                                   N/A                 CampylobacterjejuniMNYQDILEEKLITETKTHFFMIDEKDLIKELSVHAIAELSDLNADGVCDKEVIDDAINDAQSYIASFIKIPKNPTPLLKDICVKLTIMELKRRNDFPKESLKEIREWANDLLLKMANKKIPTEINEDNFISQNKVRAFKIKRKRMDLRRLNG
complement(1127933..1128910)       PHAGE_Vibrio_VHML_NC_004456: ORF26; THJ026_12220; phage(gi27311193)                  1.09e-10            CampylobacterjejuniMDLEQLLELFSSTKITEVINQTKASPRFVSDTFFKDKIPSLESTVRVEIIKGAGIVLNSISDNGEHSLENTKDAYILNIPLPRFALAKRISASEINSLRSLALQEAQAKSLSGALGVLVKEMKESFNTTLEYMANGALFGKILDGKGNVLFDFGSASKKAISVKKDGSVTLASVCDAIDSAIIDEFGTSADYEVLCGNELFAAISNLALSEDLYKNHLASRDEKDKSLILYGTKYRRYSAKYKNTNGKSVEFLKGTEGMVVPKDNSNRIYYTRANHTDALGKAPSLMFVSKPEILPRGAGIEIVGEMRAMPVCTRPNGLIKLVLE
complement(1128913..1129440)       hypothetical protein; THJ026_12230                                                   N/A                 CampylobacterjejuniMAKAKKETQNLENEDLETGDLSKALSLEDENLANEEAVSENETAKEFINEEGEEMPSKVTPKSLSNDPLIAMPKSLESFINKDLFSINAKIDLETNESLALGTLLISEDFGESFKKCPNEDISAKENVKLAMLKDHALRSGVYGVLLAGEINLKGVHVSAVKKAFMQNLIINTKE
complement(1129443..1129592)       hypothetical protein; THJ026_12240                                                   N/A                 CampylobacterjejuniMYACKDLEGFKSFLDTENDQVQVPKNNVFANKNTAKTNEFDVVKMMLGD
complement(1129661..1130257)       PHAGE_Faecal_FP_Mushu_NC_047913: hypothetical protein; THJ026_12250; phage(gi100029)     1.15e-28            CampylobacterjejuniMLFINKENLVEVSNDKPIKVAIKGEWKGHNNGRFKVDDKDLNSMIDNFNQKKIDLVIDYEHQSLKNEKAPAAGWIKELYLENDALMAKAEFNEEAKKYIANKQYRYLSPVFEFNSKDNKSGELVRAKLHSVALTNTPFIDELGELIANKNNIHQNKGEKMDEKIKELESQIIALKNENSSLALQNEALKNKTKKALKT
complement(1130259..1130693)       hypothetical protein; THJ026_12260                                                   N/A                 CampylobacterjejuniMLKSFENELLELLKDFKVRMYLGEFEDTQNIASCINNLDASLLLDFEGESYKDLENKVGTWKLYILTHTKSKAPKHRIDAKHKLFDAIEAVDKVLLNAEPSNGFRIELKDLKKVYEGISDHGYLSIYARTLQSSFLPKDDFLRI
1130842..1131231                   PHAGE_Pectob_PP1_NC_019542: peptidase M15A domain-containing protein; THJ026_12270; phage(gi423262089)     3.99e-28            CampylobacterjejuniMKNNPYFKESEFKCKCGKCELPQNVPSDELIDILCEIREHYNAPIIINSGYRCKEHNAEVGGAPKSQHTIGSAADFVVKGVKTEEVHQYVLNTYGERSLGIAIKHNFNDPYAGFVHLDTRGKKARWTYP
1131242..1131583                   PHAGE_Helico_1961P_NC_019512: hypothetical protein; THJ026_12280; phage(gi422935793)     1.97e-05            CampylobacterjejuniMFSFILSRFLSPSKIAFFVLIALCGFLYLKNNALALENENLKLKALHFSNEINVFKDKLAQQNKAIDKLKLDLKPKETLKEVLKVDKVFIKDKSCQSELKAYKELFNILGAKK
1131580..1131828                   hypothetical protein; THJ026_12290                                                   N/A                 CampylobacterjejuniMNDKMRIFLLIIPFVFLSACASKDILIKTEIKEVKVPIKCPLKLPLKPLDKKDLESAKEISKYYLEVENIAKLCTGEKDERK
1131940..1132254                   hypothetical protein; THJ026_12300                                                   N/A                 CampylobacterjejuniMKLEDIFVYMVLMIVSFIAGLVGIVTKNKLSKALNLKGKFTLFLKGMLGSMFVAYLVFEIVNYLNFGIKLSVAVGGFAAYMGTDALLKIEQLVEKLINKKMEKL
1132254..1132886                   PHAGE_Escher_vB_EcoM_ECO1230_10_NC_027995: conserved phage protein; THJ026_12310; phage(gi937533300)     3.03e-16            CampylobacterjejuniMNELGIICDIKEGKAKVAIGDMVTDFLSVFQSLANSYAVSFSPLRIGEQVLVIPVRGDLNSGVILRGLYQEKHRAKNTDENTFNIDFEDGTHLEYNSKSSTLKLDVVKNINITCVDKNTHNQNNTLNTKNHTTNANTITLNAPSINLNGNTQIAGAISTSGEGGASGTFSIKGNLNLIGNLQVSGNISDSKGDLTNHTHSCTCGATASPR
1132895..1133086                   hypothetical protein; THJ026_12320                                                   N/A                 CampylobacterjejuniMKELFLLLFSLVFFMLFCMGAFYAFLNLNFFIKSIFIGFFIAFMFLGFSQMLENIFEFYKGLK
1133083..1133373                   PHAGE_Vibrio_vB_VpaM_MAR_NC_019722: baseplate assembly protein; THJ026_12330; phage(gi428782737)     2.13e-14            CampylobacterjejuniMNYMVSIEESIKDILITPLGSRVMRPEYGSLLYTLIDRKIDDDFKIKLTRYTAEAISKWEKRVKLKGVRLNECKDNKLSITLLFENYGDLTMELGK
1133370..1133804                   PHAGE_Escher_vB_EcoM_ECO1230_10_NC_027995: putative phage tail protein; THJ026_12340; phage(gi937533298)     4.73e-15            CampylobacterjejuniMSELLSVNDSYFKQSFLKDIPYPQIIEELDYEKLLKAYEELFKSFLKDNVELLESDPFKAILEALAYREMIIRARINESIKATYLHYAKGSDLDNVVANGYLIERLKGVKPTAKVEFELNTLLTYDVIIPKVQFFQMKKQTLPL
1133816..1134535                   PROPHAGE_Xylell_Temecula1: phage-related baseplate assembly protein; THJ026_12350; phage(gi28198989)     4.37e-17            CampylobacterjejuniMIKKGQSKAQGILELDEFIQSKESKTEFLQTPLPFVAKIKQLEFFKGGASEESDEALRERAIMSVHRFSTAGSEKGYIYHALSASAKVASIKALNNGAGKVRVIIKSEDELSVDVVKEYLSADERRPLTDEVSVELAKKREFIVDAKLLLLELSRANEISEKINALQKDFDLSVDLALGFIYKCLHQDGVYKSEILSIKEKIINEEEQELKDLPLENIIIADDEFATLSFSLSYEKAVL
1134660..1135151                   PHAGE_Entero_P88_NC_026014: tail protein; THJ026_12360; phage(gi744692738)           9.17e-14            CampylobacterjejuniMPILANAYDVSIDGLNEKESRKLISKALLLDRYNGTTWAIKEALRAVFPTAVVKEWFNYGGKPYFFKVKVSTTNVSFDERTLNTLERLIYDFKNVRSVLEAIEIEIESKNDSFNANAQISGETIEILPFQTTFLENEIKSTKNAFGVFMCEISRTNIDFKGVY
1135151..1136182                   PHAGE_Clostr_phiCT453A_NC_028991: tail assembly protein; THJ026_12370; phage(gi100053)     1.40e-35            CampylobacterjejuniMAKSEYYTILTKIGIAKFIAARASGNGINLKSFKLSSKVILPSEEMQSLEEIVYEANISSKSVDESNPNYVNLMCHVPSDVGGFEVNAVGVYDEAGDLLAVGNVPRTYKPILKEGSAKELMIKIVMELSNAEEVILKLDPSVIMASRDYVDAIKVELNLKIDALTQKYDAEFKKVWDELSKYLLENKFNTEIAKYVTLATNQTITGAKNFTKLPTSSIKATNDNQFVNLATLKEQAPSLIGGLGVNQAWQNVSRAFDVTYTNNTGKPIAAKFQVNASASGGISFSCSEQFVVSMFQTSLSNGGVSRTYFGFGIIPPNGQYRLNTPEHSGFYPSKSIVSFMELR
1136207..1136437                   PHAGE_Salmon_SEN34_NC_028699: putative tail assembly chaperone; THJ026_12380; phage(gi966201445)     1.09e-08            CampylobacterjejuniMKYFIDKNDNNQIYAYEDEVSDEQIKTGLTPISEEEFNSLINPPKSEEELLNEAKELKINEINTKKRKYSKWWIFF
1136571..1136714                   hypothetical protein; THJ026_12390                                                   N/A                 CampylobacterjejuniMEEFKLFASSMAYFVQETIFKASALKEKARNAQSKEELDLIVWESEK
1136778..1137083                   PHAGE_Ralsto_RSL2_NC_028950: hypothetical protein; THJ026_12400; phage(gi971759724)     1.39e-14            CampylobacterjejuniMIMLFLCQITKAFIPQGFKTDGASIPRLFWSLFPPFKSEYFSACVVHDFLCEKANSRTDYRTADLALKEAMTLLGCSRLKIFVFYHSCNLYHAIKCLIKGK
1137183..1138208                   PHAGE_Campyl_CP21_NC_019507: putative tail fiber protein; THJ026_12410; phage(gi422935209)     2.05e-30            CampylobacterjejuniMKDYGISFIPDINQGSKEPSEPIVSDKLNAQKVNELIDKKLKLFKEELVNKEELKSLIEEILQDQNFQNTNIKISKTPPNYNTQAKVGEIWAVLESKKQLFICTANDNDFTSWVDLLGDGSNDIIPKEKIIITFDNTTTGGQYGGCMSDLRLGFENGFATPNKVQDEYENAKFTMTKDGNGLNRSDFTIDSNPTPTDNQIVGTIKTSGIYQETYHKIAHVFKKYNGGADECCLWSSSGSREVSIELENTPMPNKLFARGNGYYGQTEITNVRVKKSIFIGEQEIQSEDFNVEKLEASSDTYGDYAFLFEISKQDQIVMKKELNLNPKKTKNTKKCKEIRSE
1138208..1138411                   hypothetical protein; THJ026_12420                                                   N/A                 CampylobacterjejuniMAANYGVNFNISNGAASPIKVQSDTPIGIAASLKGASKEMIYTKAGYESVEAMPIFAFSNVNKAKNL
1138669..1139400                   PHAGE_Escher_vB_EcoM_ECO1230_10_NC_027995: putative phage tail protein; THJ026_12430; phage(gi937533292)     3.81e-17            CampylobacterjejuniMASSMNITAIVDLYATNVGEAINTMEAFSSKRLIATWPQVQILNTQGKYAYVPQSPIIAGLIAHTDGDKEYGFSDSYSNRVMNGVTGTEHFIEFINGFDCDAERLRNAHISTCILGEGYRSWGGETSHEDTIWQDLARVRTFDRIALAGQKAAFKAIDKKASELYFIKISIEELLRDLKGAKVLIGYEVSWDEERNTDANVSAGKFYLNIKMMNNPIVKQITLEFIYSDKWASDLIKTISADS
1139427..1139936                   PHAGE_Escher_vB_EcoM_ECO1230_10_NC_027995: putative phage tail protein; THJ026_12440; phage(gi937533291)     6.11e-09            CampylobacterjejuniMKRIIGEVIQEGNIYIDGQGYLGVVRNLKLPDIEQEMIETKGVLGANYSSGVLKPLEISFKLAVVDPVLYAAFFHTTFSEIKAPLLFRESVHKGGKNYGISTEFLGEFISISESDHESGKEVEAEIKMAVHFYMQRRNNIPIITYDHKNTILMINGVDMMSDVRSNLTL
1140088..1140327                   hypothetical protein; THJ026_12450                                                   N/A                 CampylobacterjejuniMKEKIIKLENGEELKMREPNVRVLKNATNKGEKEMEQTICMIAALTNKQESEIEDLNLKDFKALQDALKDFLVEAGVIA
complement(1140439..1140744)       hypothetical protein; THJ026_12460                                                   N/A                 CampylobacterjejuniMKVLKFINDDIISHIALLLTTLIPAFYISYQSASDGFFNTMAIFIFSYFASIIITAILVMIMPPIALLLILPTWLIVISLDFILFAILKIYFLKNKTIKNS
1140786..1141865                   PHAGE_Escher_vB_EcoM_ECO1230_10_NC_027995: putative phage tail protein; THJ026_12470; phage(gi937533289)     1.67e-44            CampylobacterjejuniMENAGSIGIGVILGLAIKNASAVGKVVKDFSNLEKIAAKTKLGISGLQKELNTLKLNANLRAELKAQRKGLQDEFLSLGNVIRGGIIGKGLGEAISFESAMADVRKVVNFDEGDDIKKMSADILKMSQTLPVTANELAAIAAAGGQIGLGSKDVREFTNLVTKMKVAFDMSAEDVGDSVAKIKNILGISLKDMEDLGDSINNLSDNSASKAREIIDVMKRTAAAGKQIGFTKEQIAALSSSFISLGKGPEVAGTAINSLYRVLATADNMGTKTESAFAKLGISGAFLKQASFDDPQKALDMFLQRISKLDQKEQMGVLVDIFGREFADDMATLVGGLDTYKEALKNAGDEAKKGSLQRD
1141822..1143000                   PHAGE_Escher_vB_EcoM_ECO1230_10_NC_027995: putative phage tail protein; THJ026_12480; phage(gi937533289)     1.19e-14            CampylobacterjejuniMLVMKQKKALYKGIDTRAATTENSIILMKNAFNSLAVNLGSVFLPAISWVSAGISYLVNSITYITGLVPGLNGVLGGLIATFLLAKPAVLAYAIAKNYLKDCTILLKSALIKTRIHLLAFRNSCILSNITLKAKTVTTTIYTTSLKALSFVVGGLNKVFKAVAIGIRVLSMAMMSNPIGLILGGIAIVAGLIIANWDKVKSWFKSFIEWLKPVWEPIYNVIKAVFDKCALVFTSFKDIIMSVASPLAEFLNSIWQGVGDFFYSIFGSLFDWFASKLSWVGDMISSISGFIKDALDFVGLGDDEEVKISQSEQNKEKVFTTNTYKDELAETKSINHTPSFNNGNINVSVNGTFNIATKDGNFNMQEFANAIQKSVFDALRKQEQNKINTTIYG
1143004..1143492                   hypothetical protein; THJ026_12490                                                   N/A                 CampylobacterjejuniMSEYIEIKGLENFFKACDKLIDMDKHGQSIMAGAGESIRNSIIDSFKNERSIFNGKWKSLKPATIKQKIKDGKNKGILKRDGELSNALNWQSEPTKSGVKVFNNIQTENGFKYGYVHQWGNRKRKIPQRAFLPIDNNKVLHPSIRSVIYKDTKDFIEKIVKK
1143694..1144509                   PHAGE_Clostr_phiSM101_NC_008265: putative modification methylase dpniia; THJ026_12500; phage(gi110804053)     2.29e-56            CampylobacterjejuniMKNNTDKFLKTSTLIKPTRTTLKAPFAWVGGKNYLAKEIIALMPEHKSYIEVFGGALSVFYQKSASKIEVINDINDELINLHLCIRNKPQSLTNVLNSMIISRKIFHMLKNKEIKPRNDLERAAFYFYLISTSFGSSMGQFAMSKQRAPKRLCRDFSLHTKRLKNASIENKSFEYILKEYDYNEALFYLDPPYVGTENYYKNTGGFGLKEHELLCNLLKNIKGKFMLSYNDCELIRELYKDFNIKELKVRYSLNNNVLKRKESKELLIMNF
complement(1144537..1144824)       hypothetical protein; THJ026_12510                                                   N/A                 CampylobacterjejuniMSKVIVDIKKGFSKTFINAICNHNNELVLEYLKNGMSATKECMGEEPMFYAITHNNFGAILLLLKYGAILDKEYLEESNKDFSKEALKFLSSFLK
complement(1144904..1145098)       PHAGE_Arthro_Colucci_NC_042000: u-spanin; THJ026_12520; phage(gi100032)              1.37e-21            CampylobacterjejuniMKYPNVYVKLVGEDGNAFSILARVSKALKKAGVSKEEISKFQKEAMSSDYNHLLNVVQDWVNTN
complement(1145108..1145428)       hypothetical protein; THJ026_12530                                                   N/A                 CampylobacterjejuniMKDIKNYTDKELKEKIIQDLESEFRILYKKLLKEKDYLARDNILELMTIYNMGINSYSIAKRFEMNEDKSLIQVPLFERYIIGRKFVVKYNDEKQRYELKSTFCEF
complement(1145508..1146137)       PHAGE_Staphy_P1105_NC_048636: holin; THJ026_12540; phage(gi100034)                   2.65e-09            CampylobacterjejuniMQMQEVIEKLKDILASEGKRDLKTKDIAKELGIHPDTFNSMKFRNSIPYPQILNFLNERNISINYFFYGSSPKDQLECENKYKILKLYKTNASLGGGGINDLIDCSELIMDEKLLNFFGSKECEFITCYGESMEPLIKDGSICVIDRNKTFKNKSICVINTRDGLFIKQVLKQDDGVILHSLNPLYEDIFYKNGDFLLIGVVIGELSRL
