gi|00000000|ref|AP026780.1|  Photobacterium damselae subsp. damselae 04Ya311 DNA, chromosome 1, 3211070, gc%: 41.63%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
1517295..1517310                   attL                                                                                 N/A                 TAAGTATCCCGTAACT
1532250..1534343                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA packaging protein; terminase, large subunit; PDY_13460; phage(gi169257299)     6.13e-146           PhotobacteriumdamselaesubspdamselaeMSLKQFDSRLGLEFADAKEIRRKLAYLCAPTDKTPVEAADEGLWISDGTDVTKFLSSQVPYMREPLNCLSRRIYEAVIVCGPARSGKTKALVEGWINYAVTQAPGDMLLIYSTKTKASDMSKVDLERSFNATSAIAKLRTGRKSDDNITSKKFKNGMNLKLDSATETSLSASTYRYAGATDYDRADDAVGQEGSKFELMLMRVQNAKSSGMVMAESSPGRVVRNPKREEELAPHEAQPCGGIMELYNQGDRRRFYWLCMDCCAYFQPSFETLKWEENADPLVASKQTWMECPRCGHRHFESQKQQMNMEGRWFREGEIDCYGYVVTETTAIRTSKWATFWFEGVIAAYASWENLVYRYLNAQVIYQDSGDEESLKAFMNVRMGRPYIMQSRGQEIGAHQLMARAADYERSIIPFGGRFLIMTIDVQGGKQNPRFVVQAQVFGEGLQRWVIDRFEILTNPNRNNDRINPMIYAEDWDLLIDEVIKKTYPLADGSGRMMKPVLTLCDSGGSGEKKKGRQKTSSVTDHAYQFYNRLKSLGLSHLFRLVKGASRDIEDLVKETYPDKRSKLANGEIPLLQLHTNRLKNRVAASFSRLEFGARFFHLPGWAERVWFDELTVEFIDEYGHWQKPDGARNESFDLCAYAEAGMYYKGGDDINWNNPPIWAEEWQLNSNVVDADQSPKFERQVRRRYNHSRGIFG
1534340..1534549                   hypothetical protein; PDY_13470                                                      N/A                 PhotobacteriumdamselaesubspdamselaeMINHRERLQWYLDAERKILMQQAVETAEGEKLTFASLATVRREIERLQALISRGQLGGRRSMIRRNRLE
1534542..1536029                   PHAGE_Pseudo_F10_NC_007805: Putative portal protein; PDY_13480; phage(gi148912769)     1.05e-104           PhotobacteriumdamselaesubspdamselaeMSRLNFADRIICYLSPKAGAKRLYNRTLVNKYQAALPANPHSKKRNPRSTGLANQVNRDAKSLRERARHMDENTPYVTAILDELCANVVGPNGIMIEPQPLDMNGNVHTEFARKISEWFEVFSLTQNIDGELSRAETEWLACRTWLRDGEVFARYYMGENIELEYPSETPFGVQPFEPDYIPFHINEPERGVFEGIRRNRLGQMISILIQRDQHGFAFSEVSASFIAHLKFTRRFHQNRGVTLLHSVLDLISDIEDYDQSERISAQIASRFAYFIKRDSTSNGDDGFDRGGDIFLGMGNSFELAPGEDAGIVESRRQESMSSPFRDAQMRLAASGSGVNCSSVTRHYTGSYSAQRQELIDSFARYRILQRKFVTSWTRPQYRMALQMAILSKVLTVPKGVDPNSILNAIYQAPVMPWIDPAKEMTGIEKGTRLGLQSLSHFQRERNYNPVAVRREIKSERQAMNDDDIVSTADPAHNLQSKIQHSTKEASDGQKE
1536013..1537989                   PHAGE_Entero_c_1_NC_019706: head maturation protease; PDY_13490; phage(gi428781740)     7.35e-65            PhotobacteriumdamselaesubspdamselaeMAKKNKSWFTLTNQGDDQPVKVWIHGDIGSYDIAAIDLIKALQSIGSQDVHFRIQSYGGSVYEGLAMYNAIKAHKGKTVGIVDGLVASISSYFLMACDEVHMPENAKLMIHDPAIGAWGGEDELESALTQLKNAKQTIAEAYVERSGQSLDDVLEAMAKETWFTASQALEFGLIDQVIDAVDLSNCLKTVSSQELQNKAFKHTPADLLAQLSSPTPTNPIESEPMPKPNDDALINAVKKENDRQSAIRALCAAHKVKNTLRDEMLNDLNCSTDDASIKILQYLGNLSLKGQDDPNTASDAGLTNSHIHVGNGNITKDTLQNALNARCGTAKIEKDNPYRLKTLLDMAEISVGKDAKYCSTKNELVARAFNSGDFSDIITESVRTVMRDEAEVRSPLWRELANTEDLPNFKETDLILINDAPDLMAISEDGEYKSATIKGSGEKIQLGSFGREIAFTRQAIINDEIALIAKIPRKFMQAAYRLSDKLMFNAILSGKMGDGKGVFQAGTANKWGNLVNDIPAADYQALVMALHKSFATTQTSEGDALDLRGEILLANPDHASFLEAVLNTASKPDSFNPAYKKFQKVVETARLAEVNGAIGLTGKDFDSVVMAFLDGAQDPWLETGDGWSSDGAKFRITYDVASKVIDRRGIAQALFANK
1538053..1538376                   hypothetical protein; PDY_13500                                                      N/A                 PhotobacteriumdamselaesubspdamselaeMRIADGNKIDLTAPIGGFIKDVPAKYGSLIVVPNYSAKEGQVVSCTYRGLFDGPIKAGDSPTFTGEDAYFHDGEFTKTLPVGDGAVTVPVGVFIDNGVLLMGFSVSG
1538380..1538715                   hypothetical protein; PDY_13510                                                      N/A                 PhotobacteriumdamselaesubspdamselaeMMKTSFDDARALIELSIQSCFGRDLVIMTSDGQPKTIRGYIKTQSVDGHQVKRLLTVSCLPTLSTIMLEGKHYSLSLSSPEQGKGQRDSQIQNVYILNLTQAGIKHDFSEF
1538696..1539211                   PHAGE_Halomo_phiHAP_1_NC_010342: hypothetical protein; PDY_13520; phage(gi167832352)     8.83e-28            PhotobacteriumdamselaesubspdamselaeMTSLNSNMVLDTDFLERLTYLPDELSKAAKQALVKTNQWLRAVSMADLGYELMIDSKAMSIRFRTYKNGRKSKLWVGVRSISVHRLGTPVQRGNGVQVGDRFYEHAFISPMDSDQLLVFRRENKNRHSIKAVTLEIGDETEEIIDSYLPDLNRKFEEFFHREFNYILSGTK
1539222..1539668                   hypothetical protein; PDY_13530                                                      N/A                 PhotobacteriumdamselaesubspdamselaeMVLKRLELQLGIGEIETAYQRESFEITTPTIRYQCGECQSVNHTSNDGRKIHDIELRFLIEVPTIQANFDMVALDLSCRVERELFSQFFDSAHNLEENRLISNLPRRFNPETGVFMRVVTIKQQIYMGPLEDHWHEIIGTQDYAATAR
1539649..1540233                   PHAGE_Halomo_phiHAP_1_NC_010342: putative baseplate assembly protein V; PDY_13540; phage(gi167832354)     8.21e-13            PhotobacteriumdamselaesubspdamselaeMLRQLVERIRSLEKEMVALREETEENRRSSCNIIRLGIVDSASEKTVDVVSGDNKATRIPFFVHCAGRVTHYRRPSAGEQCILINLGSGDNLNNSVALMGLPSTQYPCPTTEENQVMTDYGDGMTELYDLDKGSLTVAYPGGVLLKADIVQEGNLSVSGEVSDGVRSMSDDREIYNSHVHPHGEPNTGNTEQKQ
1540230..1540562                   PHAGE_Halomo_phiHAP_1_NC_010342: putative baseplate assembly protein; PDY_13550; phage(gi167832355)     2.26e-13            PhotobacteriumdamselaesubspdamselaeMIAIDPRTGKTVTGIQALNCRFERALTTQITARVKRRQMGNRAINRLGKMQNPTEAMIIQNLSLEALANPANGLLKFKAKQCLATPYGAGFLVSVKGRWQGKDIELKVGL
1540559..1541536                   PHAGE_Halomo_phiHAP_1_NC_010342: baseplate assembly protein; PDY_13560; phage(gi167832356)     6.84e-47            PhotobacteriumdamselaesubspdamselaeMSLPKAFVVPEFESLLNEYIQFAVSYCAKGDADKAKVLNEAMTNDSELLAQMVQAFIIKRIAEIREQNHQSLQMFRKFVTESDMVDLLALQYGLKRQVLEAGNDLVFPPKPPVMESDQSLLQRFDLAPYQFHTTGTRMGYKFHALTLDERPLIKIESEDNAVVMRYEFQDLTRPMPVKDAMPQMLEPNSGKVCVAVLSRENPRGIADEALLTRVRHYLQRDDIGQESDEITTKSAIAKDYRIEVTVYTGSDPGSHVEQSKAEQAAWDLARKRHQLKGIIDREEVAHIFYQLGAKRAKVHEPAQDIICQWDEAPYCTEVIIHVRGD
1541520..1542269                   PHAGE_Halomo_phiHAP_1_NC_010342: putative tail protein; PDY_13570; phage(gi167832357)     7.15e-36            PhotobacteriumdamselaesubspdamselaeMSEEIDHFISVQPENRTLIEESLEYAWHQVIAKQKDPFPELKQPLLTPNDFVSLLAGERGVTDWRPEDTIEQQRKTADKAFEIHRKAGTRHGLAVAMDALDCDIEVTPWYQMRSPPGPYHLEIVAWKRNSPVDKKTTERMLQRVENTKSERDSVDLIFAFGLDSGFSVSGVQERAIIETDSSVTGLMPTSPVCALSSQVAGAVEHVIENEMSVCGVLPNDALCQGGIYLGGGTKMLMCTDITLGAMKTC
1542263..1542784                   PHAGE_Halomo_phiHAP_1_NC_010342: putative tail protein; PDY_13580; phage(gi167832358)     8.41e-66            PhotobacteriumdamselaesubspdamselaeMLGVVQFTKAGLAELISAKNQGLKGALKWIAAGDRSYQPSPDQKSLYSERQRELISDWEEISPTQLRMGAAFKGNLEYEVREVGFFLESGTLLAVYSRPNQLLTYKSASASWIQKFTLDVSPLPTDSITFIEGNNDLNLLLGEELATMATAQISNMARHLELLFRFNELEKRS
1542790..1543170                   PHAGE_Halomo_phiHAP_1_NC_010342: hypothetical protein; PDY_13590; phage(gi167832359)     2.52e-25            PhotobacteriumdamselaesubspdamselaeMTCTMDGPPLLKIVAGTTFGFDLHWTTGDEDNPYVKLSGCTAVFVIRSITGDVLVRGTTESGHISIIECEQQSDKLDIQITHDQTQGQQPQAWENANYEVRVTFPSGDPYSILRGPALLIKGAVDD
1543163..1543465                   PHAGE_Halomo_phiHAP_1_NC_010342: hypothetical protein; PDY_13600; phage(gi167832360)     3.67e-08            PhotobacteriumdamselaesubspdamselaeMISSGARVLVSLKTDRIITVRLPQTTAIIHEQVKPNIEVVTIGQQGPVGTVSESVLAAAAQAKAISENALKQTQITSGLLDEVIMNMTNGFNFHAGVIST
1543474..1544127                   PHAGE_Halomo_phiHAP_1_NC_010342: putative tail fiber protein; PDY_13610; phage(gi167832361)     9.73e-19            PhotobacteriumdamselaesubspdamselaeMLGNKIDQMIAALNNVMGVINGKLRLKADKSEVYLRNYLDDPLSTLGANASTANKLKVARTITLGRDAAGSVSFDGSGNVTLQVTIPALDDKADKVETLTPAQIDARIHQLIGVAPDVLDTFEELAKALGNDPNFAATMSTELAKKANASEVYTITAADAQFLTKRGKAADATLFGGNAPDHYATSGQISTLEQEIADGFTRLAASFNDAANTINGN
1544131..1544823                   PHAGE_Vibrio_VP882_NC_009016: hypothetical protein; PDY_13620; phage(gi126010867)     2.47e-06            PhotobacteriumdamselaesubspdamselaeMGLEQQISSLVQASENLTGAVNNKIGEIDKEVEQAKKEFKQFQSIADNRYLNVVSATTSGHKLQNVNFGDWEYHTSDISPTRGCNALILAKKINFSVDPAVRGDMTALGTINALRIHKSKFLTIRRFTLKYCESYTTREIQIVADELNAASGWEIREILLPTLDPITPFYVLSTKLSLDSTPNRIAFEGYLTFDGVWGYSIANPNNNQYEYSGRAILLSDCGYVLPTKGV
1544826..1545083                   PHAGE_Cyanop_NATL2A_133_NC_016659: hypothetical protein; PDY_13630; phage(gi372217848)     6.87e-13            PhotobacteriumdamselaesubspdamselaeMSIISFDYYGDRQGKEYEMWKNDAWDKIRLVRDNLIKETDFTQVSDCPLTDEKKTEFTAYRQALRDIPQTYDNPDDVIWPAKPTL
1545142..1545345                   hypothetical protein; PDY_13640                                                      N/A                 PhotobacteriumdamselaesubspdamselaeMATLNKTGLQDHPILQPFRLNGRWHLPEEKTIALHPSQTAFLLMNGKIGEAINLPKSQPKETKGQAV
1545342..1546517                   PHAGE_Halomo_phiHAP_1_NC_010342: major tail sheath protein; PDY_13650; phage(gi167832365)     7.90e-97            PhotobacteriumdamselaesubspdamselaeMSSLTPIQDFELNGVEVHTIEPQPSMGPLAQQVVHLVGTAPDKRGTVAYHEPTRLWNYSDAMMALDSTGNRQGTLPHVVRYLLEYVKCILYVTVVPVGDNSAATEANVIGGVDSSTGAIRGLETIKACPETPTVIAAPGFHSKAVGQALAVIGRDVRCRPVLDGPNSNDMAAAEFASGFGAEGTGEDKLCIIDPWFMKTYDGAQVLMPASIALVAAMASVAGWESPQNRAVLCDETARNVSYKINDKTTQANFLNKHGVTTIAHTRMGGYSIIGNRTNTGRFISHVGLEDLMARKLEETSQPLLGKQLTEDFMQQVVDRLTNWGQDLVAQKVIPVFKAFLHPSKNNLENYTAGRWFLCVNYGRYSPNEHMIYEMSVDNGLIAAWLEEVLNG
1546510..1547001                   PHAGE_Halomo_phiHAP_1_NC_010342: putative tail tube protein; PDY_13660; phage(gi167832366)     8.40e-12            PhotobacteriumdamselaesubspdamselaeMADRIRMRITAQVESVPLMNEIVDFTPPEVKSKLANNEGAFVASEDTVGLEKLNWTLKVKGEHGVLSRSLGQYTMGNAQINVVEKGKSTDGIPYVESYSMYGPITGIKKEAVKMGEKPTITIEGTCKAYTQHDTGILVHDINVNTGKTVIGGVDLMALAGIGL
1547069..1547638                   hypothetical protein; PDY_13670                                                      N/A                 PhotobacteriumdamselaesubspdamselaeMEKSSVLPFFHRRGDHKLNIKTISLGDFRKLPYVMKDELSSPEQFKQFKAMILACTDLTELEFEELSAPDFTQLHQDIRAFILTPSDELNGQPLTGTQFEFDLLFPFKNELNEDIGHIKFKVPKVKHSEALANIDDHYEREEFMFRVVCDLEKQDMDMMAINDYLAIKPQVGAFFQLAGDYFRPKTSKL
1547751..1550660                   PHAGE_Vibrio_VP882_NC_009016: phage-related tail protein; PDY_13680; phage(gi126010872)     9.65e-83            PhotobacteriumdamselaesubspdamselaeMSEKISFVLDATVNGLQEIVSTTSATERLTQALESQRGEVKSLNSQLRNIKGFESAELKAEKLAAQLVETKKTMSRLDDEIIQSKKGTTQLRGEYSLTQNEIRGLNTQIATASDERLVSLKNQLKAAELRLESLNVDIHQSKAHTNSLSVAYKRASGKVETLTGRQVKQSATLNKLKQSLHNAGISTDHLGEEQRRLKLQTDKATASLEKQNAHLKEMQSIQGRIDSRKAKLGELGSQATGLATAAAPIAGSIWTAVKNESSFADVKKVVDMNDEQAKELQSWALKTSTTTPMSANDVNAMLAAGGQSGIADINELKEFVLDSSKMGVAFDMEAGQAGETLSVFKAALGVDQKGAMNVAGLANYLSNNSNAKAKDIAGVMAREGASAKTGGFSINESTALSASLLSLGMGEERAATALKNISGRLTLGDAASGNQKKAMAAIGLDASDIAANMQKDASGTLIHVLEALNQAPEEDKSALLSQIFGEEAKGAVASLSGNMENFSKLLKLSKENSSIHLNSLDKEYQSRISTTESGIDMFVNKLNRLSVVFGTALLPALNWVLEPLGKGVDLLADFAQENEGVTQAVGLGVAAFIGLKGALLAGKALSLVFGNSMDKTRLFTKGLNRETQDGGRIAALAARRWRNLNEAVAASRGPTSSGGGLGQESRRRTKRSRIRRSSRKRGLGRVIDTVANSRIAQHLSSGVQSLLGLGKNPIQAMVAPLPAAVPMVRSSSSGLGNIVNGVTESRIGKGVSAGSKSLLGHVRHNPMGSLLAVAGSGLALDPMADMASDVIGIGTDIAEKAGKTGLTKVLKPLGMAMSATSVIDGVAHGDMEKAGGALGDLGGSMGGGALGATIGTMIFPGVGTAIGGLLGSIAGGMGGEMLGSWFGRKLDSPEETAKKVEAVQSQEASAKQSPPVTYSPSFQIHAAPGQDPKVIAQEVSKQINHQLAALMGENTVSTQFSYAAIDRDS
1550669..1551037                   PHAGE_Halomo_phiHAP_1_NC_010342: putative tail protein; PDY_13690; phage(gi167832369)     4.89e-14            PhotobacteriumdamselaesubspdamselaeMHHLVIGEFVFSVGGKTPITKFERTSPGAFAEVGLIYDARSENVGRPLETIDISAKWLQFGAHLAVEQLRTLIETPQQVSDGQGMNLGKWTIGQLKEGKSSLIHNGKAMVTDITLQLKEYRE
1551034..1551237                   PHAGE_Vibrio_VP882_NC_009016: phage tail X; PDY_13700; phage(gi126010875)            4.14e-06            PhotobacteriumdamselaesubspdamselaeMKVMAKAGMLITDLLFQYLGQDNDQIEHAFYRLNPHVRREVFLIDTEVILPDVELTPKTQHVTKSWD
1551240..1552214                   PHAGE_Halomo_phiHAP_1_NC_010342: tail protein; PDY_13710; phage(gi167832370)         8.98e-66            PhotobacteriumdamselaesubspdamselaeMFHLIGKNAELILERLKSWRLNDGNGTEGDNVTLVISSDDIDGIPPKGERYSVRLGHVVRDEFQISKRSVNLSPREITLVLTVAPFSIMDESGYRERKSSSWDRTTLGQVVFDCVTPHGFDVFVHPRLQKIEIEHLDRSDESTPAFMNRLAKSYDAVAKPVEGKFIFVPIGEQRSASGKDIEAVTLSLPLINHSGNSDFINVSAELDGRQEFSGVRAFYGSTDTGKRLEVRVGSKPFKTLGKDKNSKQEAEQACAAELRKMQRQGRKISIEAPPVPTAFAEGVIVLDDSFPRAFKGRCSIDQVSFSGQGLQISRMNIQATLMGE
1552214..1553488                   PHAGE_Vibrio_X29_NC_024369: integrase; PDY_13720; phage(gi658311188)                 1.08e-78            PhotobacteriumdamselaesubspdamselaeMLSSRTKIRINQQAFFSSTLPVKISDAQIKRHIDDLRVRQLKDIRCPLYLRFNQNRTGGTWWFYRYEKGKQYSHRLGAYPAIQAKDIMDVVSAASVKVAKEEIIECHCFETVDQLVAWHVERQRTLNQSSKARLVNLKSMAETHVMSIFHGVGVTDLTHQELDRLMIQPMFSEGYSVSYVRANFFLLKTAYSTAKRLKHISINPLADIQFKHFFPETFSITEAQIKGCRLSTEQLVRCLPLIAQALPPKRLLLTMMLAHGSRIGETRKARWKNINLSERSWFIPKEDSKNGVAMVYPLTTDMVELLRSYQAWQHHLGYKGDLLFPLSRWSKHPIHSSKASEWVREISDRQWSAHDLRKRARSIWAELGIDYIIGESLLNHSRDKLDQAYIHTHMELQKKEALETYHNWLKNCWCACLSPVSIQN
1553562..1553855                   hypothetical protein; PDY_13730                                                      N/A                 PhotobacteriumdamselaesubspdamselaeMHICAKNKQINANLMGAARAVPHQVGLIKLSKTQLKVLQSIMPGEKVTAEQIADRCELSNSWASTLLKTIWERGYLVRTAYMREGGGVIFSYSNRHA
complement(1553830..1554261)       hypothetical protein; PDY_13740                                                      N/A                 PhotobacteriumdamselaesubspdamselaeMQYHPHLRSLFVELESSYNREKALYINKKNTKEILKKHNRFNEYSTSYVNRLQNAIINNSKISKLVICGLKAQCFFEVVFFPEEDLSFSSNYFTKTIFNRNIKIKYVYHPSPKNKNYNKCWVKGNNENAMLRNFILKHDDLNN
1555132..1555147                   attR                                                                                 N/A                 TAAGTATCCCGTAACT
1555556..1555810                   hypothetical protein; PDY_13750                                                      N/A                 PhotobacteriumdamselaesubspdamselaeMRTQVRKIGNSLGNIIPAAFIRQLSLEEGSEIEVKTEGGKIIIEPIKAKKKRFPFSEKELLQSMNAYTAHADEIAVVSAKELGE
1555810..1556163                   PHAGE_Strept_EJ_1_NC_005294: transcriptional regulator; PDY_13760; phage(gi39653708)     6.63e-15            PhotobacteriumdamselaesubspdamselaeMVKYIPQRNDIVWLDFEPVKGKEIGKYRPALVLSSKEYNQKSGLLICCPISTSIRGSVTEVSVKNLDKPSVVAASLIQTLSWADRSAKLITTADSGVMEDVLLRIIPLIGADTLFEE
