gi|00000000|ref|BX571963.1|  Rhodopseudomonas palustris CGA009 complete genome. 5459213, gc%: 65.04%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
132242..132388                     PHAGE_Entero_phi92_NC_023693: Phi92_gp067; RPA0115; phage(gi726647000)               5.56e-07            RhodopseudomonaspalustrisCGA009MTKRFLVTGGAGFIGSAVVRRLIGTTPHEVLVVDKLTYAGNLDSLAPVA
complement(132389..132900)         PHAGE_Entero_phi92_NC_023693: Phi92_gp067; RPA0116; phage(gi726647000)               9.95e-55            RhodopseudomonaspalustrisCGA009DDPRFRFVRADIVEQSTMRLLFEEFSPDVVMHLAAESHVDRSIDGPGDFIQTNIVGTYSLLQAALAHWRSLPAARKSGFRLHHISTDEVFGSLGAEGLFREDTPYQPKSPYSASKAGSDHLVRAWHHTYGLPVVITNCSNNYGPYHFPEKLIPLAIIKALHGEAIPVYGTGG
132902..133303                     PHAGE_Entero_phi92_NC_023693: Phi92_gp067; RPA0117; phage(gi726647000)               2.80e-38            RhodopseudomonaspalustrisCGA009DNVRDWLHVEDHADALLLAAERGEIGESYNIGGRNERTNLEVVQAICRLLDELAPDAAIGSRAKLISFVADRPGHDARYAIDASKVERELGWRARYTFDDGLRQTVQWYLDNRTWWERVRSGVYRGERLGVAV
133329..133886                     PHAGE_Entero_phi92_NC_023693: Phi92_gp065; RPA0118; phage(gi726646998)               4.53e-39            RhodopseudomonaspalustrisCGA009MLTVTSTAIEAVKIITPRAFADSRGSFVETYNRQRFVDHGVALEFVQDNQSISAAVGTVRGLHFQSAPFAQDKLVRVAKGRILDVAVDLRRSSPTYGQWVAEELSAEDGKQLLIPIGFAHGFCTLEPDTVVAYKVTNYYSPPHDLGIAWNDPDLAVRWPVTADQAVLSDKDLELPPFASLPNYFE
133891..134784                     PHAGE_Entero_phi92_NC_023693: Phi92_gp064; RPA0119; phage(gi726646997)               1.30e-42            RhodopseudomonaspalustrisCGA009MRIVVTGRHGQVAQALYERAAGTNAEIVLLSRPEIDLTRQSDIETALSAVKPDAVVNAAAYTAVDQAESEPDLAYAINAEGAGAVARAAAKLGVPMVQLSTDYVFDGTAEQPYRETDPTNPLSVYGASKLAGERAVAKATPDHAVLRTSWVYSPFGKNFVRTMLALARQRDEVRVVWDQVGSPTSALDIADGVLGVVRNLLAEPTRSDLRGIFHMTADGTATWAAFAEAIFAASRAAGGPSAKVIPIPTTEYPTPAKRPTNSRLDSSALAAAHGIRLPHWRQSLQPCIERLLAQDAN
134786..135661                     PHAGE_Entero_phi92_NC_023693: Phi92_gp066; RPA0120; phage(gi726646999)               2.47e-123           RhodopseudomonaspalustrisCGA009MIIKGIILAGGSGTRLHPMTAAVSKQLMPIYDKPLIYYPLATLMMAGIREILVISTPADLPRFQQLLGDGASWGMSFSYAEQPKPEGLAQAFVIGADFVAGQPSALVLGDNLFYGHDLIPLLQNAAQHPEGATVFAYQVSDPERYGVVEFDTNQVARSIEEKPAQPRSNWAVTGLYFYDQDVVEIAANLKPSARGELEITDVNRAYLERGKLRVEKMGRGFAWLDTGTPDSLLDASEFVRVLEKRQGFKICCPEEIAFRFGWIDTRQLERLAQPLAKSNYGGYLLKLAANP

#### region 2 ####
843306..843317                     attL                                                                                 N/A                 TTCTTTGTTGAG
complement(846945..849308)         PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; RPA0765; phage(gi100064)          7.80e-08            RhodopseudomonaspalustrisCGA009MRADAHPDTRSLIGKTLAAGQRRPLRTITLAALLTSSSQLCFAQSATPGATITLDTIVVEQRREAVRAPARQRSVVRRAAPAATPNAAPAASTVQTVDLVRERFNVLAGGVALVSQKDMPNAGNPTLANTLSGVPGLIIQNFLGANDQPRIQMRGSAQQNPAERGVLVLYNGLPINRADGSYIVGFANPRQAEAIEVYRGYMANRLGATVLSGAINFISPTGSSQPGVQMSVSGGSFGQINSSAQIGTKKDNVDAFLQFDTTRRDGFRDYNSSDRTSLNANVGIALSENVKTRFFLGYTDLGFDVAGPINKDALFANPRQTATGPTVVNGVAINPGPNAVRDKPRRDASQFMIGNRTTATFDAHLIDIALGYTYTDDTFRFPISSGVRSTKGGDFTGLVRYAYNPADALLPLFETTAQYSVGSADRDYYLNQSGMTGAQFGSNRLDAQTLSLFAGANVPVWQQWTVSPAISYAYATRDNDDRYTAAARPTIAYNPAKPTVLLPNGSVPTQDNGYARSYSGWNPSLALSYRPDATQTFFIAGSHSFEPPTHDDLIATINGTPNSSPGRPTPPSPNLKAAAFATPNLSAQTAVTVEGGWRGRADRFSWDVVTYYSWIDNELLNLRDVTGASIGAINADRTTHFGIELGAGVRFTDKLSGRLAYTYQDFRFVNDPLRGNNKLGGAVPHLIYAQLQLQATDAWMVQGAVRWSPASVPVDNMNTLYADPYAVVDLRSEYRINKTFRVFGEITNLFNKTYAATSLVVDQARPDQAAFLPGDGRGFYAGIKASF
849702..850409                     transcriptional regulator, Crp/Fnr family; RPA0766                                   N/A                 RhodopseudomonaspalustrisCGA009MMEKGVLRAAATRSALFSQLPPAETSRLLDASSLRQFPAGQALFHQGDVPEYLFQILSGLVRVTQLNSEGEQITLRIMRPGDLCCVAAFRQRSYPATATAIKATSVLAWRTNSFVALTQQSPALADNVVCIAGDRTREMLQRATEMTGKCIAQRIAASLLRLSAQAGVRTPAGIHIESPVTRIDLASMAGLTYFTVSRTLSAWQKQGLVKSGRHRLTILDISRISEIAEPRIGAG
850515..851456                     PHAGE_Bacill_G_NC_023719: gp350; RPA0767; phage(gi593777806)                         1.77e-20            RhodopseudomonaspalustrisCGA009MREDSVASLLSDEARARLYDQALTAAGIGAWECDLATERLNWTSAVYGLFGYPIGNPLRRASIVDLYVDESRRHMELARAEVIQSGRPVTLETEIRTWRGEMRWMRLSINALREGGRPVRIFGCKQDVTSDRLAIEHLRQQAETDPLTGLANRARFQERYREVVSDRLHHGFASALVLIDLDGFKELNDTLGHLAGDACLCEVAQRLRRAFNSAGLISRLGGDEFAIILRTPTSAERIADVLRRTIVMLSRPLFWNGHRIKVSASIGAALIGRPHQRRIADLFAEADLALYQAKAAGRNRVSLIGDQAQSRAA
851947..852750                     PHAGE_Mannhe_vB_MhM_587AP1_NC_028898: transposase; RPA0768; phage(gi971753894)       9.55e-71            RhodopseudomonaspalustrisCGA009MRVEQELRLKGLQVSAGGIRGAWQRHGLLTKHERLLRLEKTTAERTIELSDEQTRLLERFSPEFRERHIEAPHTGSLVAVDTFFVGTLKGVGKVYLQTAIDCHSRYAFARLYSSKLPVTAVHLMNNDVLPTFEAHDAKIETVLSDNGREFCGRPDQHPYELFLQLEDIDHRTTRVKRPQSNGIVERLHRTLLDEHFRVEGRRTWFETIDEMQTVLDDYLVGYNQRRPHQGRGMNGRTPATAFVEGLPTSQQRKEGKKAGKQATKVAA
853002..853823                     hypothetical protein; RPA0769                                                        N/A                 RhodopseudomonaspalustrisCGA009MNGKSDAFELERLEAALNDSANRVSTIWVSFLVLLLYFAIALGAVTHRQLLIGDALRLPVLNVDLPLVGFFFVSPCLLVAFHLYVLLQVMLLARTAAAFSEVVDRKFRAPPANSILRQRLANTLFAQIFAGSPRERYGAIGGLLKGIAAFTLAVLPVLVLYGFQLVFLPYHDARITWIHRALIVLDVFIILTLWPLIRNGGRNCGWTLSRVEISVFVSVVVVSSVVAMMLHFPGEKFVRIFFVEGAKFDEAEICSASILARYDRLSLRNVDIV
853722..853733                     attR                                                                                 N/A                 TTCTTTGTTGAG
complement(853839..854762)         PROPHAGE_Xantho_33913: IS1477 transposase; RPA0770; phage(gi77747809)                2.14e-78            RhodopseudomonaspalustrisCGA009MVTPAAKRKAVAHLQTAFEMSERRACKAIGCCRMTVRYQTSRSDDAGLRQRMRAIAHERRRFGYRRLHVLLKREGYLVNHKKLFRLYREEKLTVRRRGGRKRALGTRAPMTVPVLPNDRWSLDFVSDQMTDGRRFRILTVVDDCTRECLALVVDTSLSGARVARELDRLVAERGKPKMVVSDNGSEFTSNAILTWADQSRIAWHYIAPGKPMQNAFIESFNGRLRDELLNETLFTSLAQARVALRCWRADYNDARPHSQLGWRTPSEFAATCNPRRDLALRYIESSTPAPATAHMGPSNHPNELRPG
complement(854756..855022)         PROPHAGE_Xantho_33913: IS1477 transposase; RPA0771; phage(gi21231080)                3.83e-33            RhodopseudomonaspalustrisCGA009MKRSRFSEEQIIGILKEHEAGVSVADLCRKHGVSDASIYKWKAKFGGMDVSEAKRLKSLEDENTRLKRLLADAMLDNAALKDLLGKKW
855099..856412                     PHAGE_Microc_MaMV_DC_NC_029002: hypothetical protein; RPA0772; phage(gi971764756)     2.48e-13            RhodopseudomonaspalustrisCGA009MLQRIEQATAKKGRHDFGGERTHNLSHRNFDCSDFASADMRRVDFTGASFVGADLTAAELQGGNFVNAILDGAKASFVSLEGSAFQDSSMRRAQVVGAKFDHAIVLRSDFSGTVFDYSSLRGVRCERSVFDGGSFKIADLLGAENDLCNFRGASFQGARLDGAYFHSSDLRFASFVNSKVRGVEFAGGSLVGAAFSSAEVQASEFKWVSLDFVEFDDAVLDGASFAYSQLSTVLMRNASVWRTEVGSCDGYDVASVKTGRFRDAVAGRRRKEAHGGEVLMREILADIDSFALPGSAKLRVTKMFAAAGIGSDERSDSKRGVSEKAWKACIARSSNFEGKETFSSGILKAVKSLACTPLASRREIIAGLIEDWSARMRLRRSLSVGFARQMLELEGQNCGINSLLTGQQVRELYRMLSASRAYIPETVPRSEVKILAS

#### region 3 ####
1394358..1394370                   attL                                                                                 N/A                 CACCGAATTCATC
1394619..1395500                   PHAGE_Escher_KBNP1711_NC_023593: putative integrase; RPA1274; phage(gi589892392)     8.52e-05            RhodopseudomonaspalustrisCGA009MHVAMALADIDRVGGVVIIDPVVHPLTPKHPPNQAERGQIRADRCSTAVFAWLFHEWNATGRSALMRGLTCFAGNTNAQPKHPRRAFRDRLGSTGPRPPRLTVASTPSRQPHHRRILIVTKAKSGSVAPELDTPTDLPPQSVEKISTALNGLLADSFALYLKTKNFHWHISGRHFRDYHLLLDEQSAQILATTDDLAERVRKVGGTTLRSIGHISKLQSIQDNNDDYVPPREMLRELMNDNKKVAAAMRKAHEIVDECKDAASAGLLENFIDETEKRTWFLFEATRQEGANEA
complement(1395763..1396287)       conserved hypothetical protein; RPA1275                                              N/A                 RhodopseudomonaspalustrisCGA009MSLARDQIKPLELVFDDDGLIPNTPLPLLLYKRAIDVSGREPEQAIEELFEQNGWGDRWRNGIFDYHHYHATVHEALGVARGRAMVLFGGEQGEAIELTPGDIAVLPAGTGHKCLFASHDFSVVGAYPPGPKMQVTRPTPANYRRALQTIPQVALPKTDPVYGADGPLRKLWLK
complement(1396520..1397713)       PHAGE_Halovi_HGTV_1_NC_021328: carbamoyl phosphate synthase small subunit; RPA1276; phage(gi509140368)     4.17e-55            RhodopseudomonaspalustrisCGA009MTNSASHPAWPDHKPTALLVLADGTVFEGFGLGAEGHAVGEVCFNTAMTGYEEILTDPSYAGQLITFTFPHIGNVGTNDEDIETVNMAATPGARGVILRSAITDPSNYRSSRHLDAWLKARGIIGLSGIDTRALTALIRSKGMPNAVIAHSPTGEFDLHALKEEAREWPGLEGMDLVPMVTSAQRFTWDETPWAWGESFGRQDKPEFNVVAIDYGIKRNILRLLAGEGCKVTVVPATTSAEDILAMKPDGVFLSNGPGDPAATGKYAVPVIRKVIETGVPTFGICLGHQMLGLALGGKTVKMHQGHHGANHPVKDLTTGKVEITSMNHGFAVDKSTLPANVQQTHISLFDDSNCGIALADKPVFSVQYHPEASPGPQDSHYLFRRFTDLMRAKKAAA
1397862..1398566                   PHAGE_Mycoba_Timshel_NC_041983: dihydrofolate reductase; RPA1277; phage(gi100060)     4.77e-06            RhodopseudomonaspalustrisCGA009MDTSLPVVLVPGLAGSPRIYAPIFPALWACGSPVTVANHIRDDSMAAIARRILAEAPSRFALAGHSMGGYIAFEIMRQAPDRVAKLALINTQALPDSPEATERRTRQIGEAEAGRLHAVLDELYPGFVHPSRRDDAVLRTVVHEMGDDVGAAGFVRQQRAIIARTDSRHTLGTIGCPTLVISGDTDTTIPNSLSQEMADGITGAKLLIIPDCGHLPQIEQPAATAAALADWLRN
1398724..1399179                   PHAGE_Bacill_G_NC_023719: gp509; RPA1278; phage(gi593777964)                         4.05e-10            RhodopseudomonaspalustrisCGA009MLRDDINNAVKEAMKAKDERKLSTLRMVNSTIKNADIEARGQGKPPLSDGDLLSLLQKMIKQRQESVELYDKGGRAELADQERAEIAVIQAYLPQQMSDDEVKAAIAATISETGAAGIKDMGKVIGALKAKYAGQMDFGKASGMVKAALTG
complement(1399267..1399575)       hypothetical protein; RPA1279                                                        N/A                 RhodopseudomonaspalustrisCGA009MDAFAQPHLHIVVVSAGWQAPLHTVVNGCASGAPRSLVGLSRRLRRARPDRRGHDPAGALPPQRQAGDGALSLISHSGFASDRDPGILQFSRRKAQRGARRP
1399766..1400614                   conserved hypothetical protein; RPA1280                                              N/A                 RhodopseudomonaspalustrisCGA009MSISGKVDPVVRPITIGDIAEALGQGLRDFQAAPLYGLAFGAFYAAGGLLILACLTAFHMVYLAYPLGAGFALIGPFVALGLYEVSRQREAGKRPSLLQIVGLMRSRSELGWMAFVTLFLFVIWMYQVRLLIALFLGVGASFGSLQEFISAVLTTNEGLVFLAVGNCVGACLALVLFSLTAVSFPLLLDRDVDFVTAMVTSVRAVVKSPLPMIGWAATIVVLLAISALPYFLGLVVTLPVLGHATWHLYRKIVAPVAAELPDTADTEASNNVVAMPKRAATG
complement(1400728..1401201)       conserved hypothetical protein; RPA1281                                              N/A                 RhodopseudomonaspalustrisCGA009MSKPEFAYVTYIRTTPDRLWHALTDADFTRRYWMDCTLRSDWTVGSEMTMERGGEIKNRCTIVESDPPHRLAYDWVSVWDPAMRQEKPSRVTYEIEPQGDLVKLTVTHQNFTQGSTTLPSISFGWPMVLASLKSILETGQPLPFAPQSHAAAESAHV
complement(1401194..1401508)       possible transcriptional regulator, ArsR family; RPA1282                             N/A                 RhodopseudomonaspalustrisCGA009MDEVFKALADGSRRALLDRLHARNGQTLSDLCDGLAMTRQAVTKHLAILEAANLVATVKHGREKLHYLNPMPIHEIGERWIRKFERGRLAALSDLKRKLETRDE
1401637..1402254                   homoserine/homoserine lactone/threonine efflux protein; RPA1283                      N/A                 RhodopseudomonaspalustrisCGA009MSLEMYLTFVTACIVLALLPGPVVTLVIANGLRHGTRAALLNIAGAQLGLGLVIALVAAGLTTLMATMGYWFDWVRFLGAAYLVWLGIGLIRRPVEGLSTDQPPPPPRGGFFLQGFFVLLANPKVLVFFGAFIPQFVDMQRETVPQVALLGVTFMVIAAMTDAIYALLAGRARTMFSAQRTRLLSRISGGFMIGGGIWLALSRAK
complement(1402378..1403175)       conserved unknown protein; RPA1284                                                   N/A                 RhodopseudomonaspalustrisCGA009MDGVRDNFLSLDAGEPPVIERNQNGQSPFLLVCDHYGRQIPAQLGDLGLPEAELTRHIAWDVGIAGVAERMSDALGAHLIAQRYSRLVIDCNRPPSAESSIPLVSEATTIPGNDGLSREHAAERRRLIFDPYHQRIEAAIEDRQLSGQPTVLLALHSFTSVYHGMARPWHIGTLYQDCTVLPPLLLAELRREPDLVIGDNQPYAVSDGTDYTIPVHGTARGLITSGIEIRQDQITDEAGQVEWASRLTRVLSTIADTLRQQQALR
1403337..1403744                   PHAGE_Bacill_G_NC_023719: gp513; RPA1285; phage(gi593777968)                         1.52e-08            RhodopseudomonaspalustrisCGA009MMSDRLFVYGTLMRGYDHPMARLLSSNAEFLGAASIPGRLYLVRHYPGLVPSDDPADRVHGEVFRLHRPDEVLAQLDDYEGCGPRDQRAEYRREIACVTLEGGTELDAFVYYFNWDVARLPHIATGRFQPEAFSG
complement(1403761..1404003)       hypothetical protein; RPA1286                                                        N/A                 RhodopseudomonaspalustrisCGA009MANCAHCNAQMTSLGVEAIDGVYEIHSWKCDDCGHVLDIATASVEAYDFPSFCLTEPGDPDWLTLLPLAANARIELHLTG
1404459..1406468                   PHAGE_Helico_phiHP33_NC_016568: DNA primase; RPA1287; phage(gi371671350)             1.76e-34            RhodopseudomonaspalustrisCGA009MRFSPQFLDDLKARLSVSEVVGRRVKLKKAGREWKGLSPFQQEKTPSFFVNDEKQAWFDFSSGKNGSIFDFVMLTEGVDFPEAVERLAAMAGVALPVQSPDTARQEQRRKSLYDVMELAANYFAENLASRAGARARGYLADRAILPGTQVKFRLGYASNERYALKEHLGKHGVPVSDMIEAGLLSAGPDIPVPFDKFRDRVMFPITDLRGRVIAFGGRALEKDVAAKYLNSPETPLFHKGDNLYNHAPARKAAHDGGAVIVVEGYVDVIALVTAGFPATVAPLGTALTEAQLQHLWKMADEPILCFDGDRAGQKAAYRAADLALPHLKPGKSLRFALLPEGQDPDDLARAGGRLAVEEVIGAARPLADMLWAREVEGGLFATPERRAALEARINELSNGIQDEVVRRYYRQDLAERLRAAFAPPGGYGGGFGGGFRGGGGGDSGRRFAPRDGFPQGGGRFAPRGRPGQPAPMLGRGPYQIASPDLISSPIMRGQRSAMSRREALILISLLNHPWLLDDHLEEIAALEFAHPEAHRLRAAIIAAFAQHHHRGDDPVGQAEKLRADLVKAGLSEQLQRVERAITTSAVWGSGPKAAREDVLSTWQQLVALHRQSHSLLRELKDAELALGDDGSEANMRWLNDVKARLAQVEGTEALIEGFGESSGRFQRSV
1406728..1408824                   PHAGE_Synech_S_CBS3_NC_015465: group 2 RNA polymerase sigma factor; RPA1288; phage(gi331028036)     9.42e-37            RhodopseudomonaspalustrisCGA009MASKAKTVQVQDKDKDDKVDAPEKDSVDAPSPLLDLSDAAVKKMIKQAKKRGFVTFDQLNEVLPSDTTSPEQIEDIMSMLSDMGINVSEAEDTEAEEEEAKEEADEELDNDLVEVTAKAVTETKKSEPGERTDDPVRMYLREMGTVELLSREGEIAIAKRIEAGREAMIAGLCESPLTFQAIIIWRDELNEGKIFLRDIIDLEATYAGPEGKNNIGEPGEEAAAEGEGGAPAHVAPPAAPPSATPFRPAQQRGAAPAEAEGEGAPEGDGDDDEFENQMSLAAIEAELKPKVVETFDKIADNYKKLRKLQEQDIANQLQNEQLSPSQERKYKKLKDEIIVEVKSLRLNQARIDSLVEQLYDINKKLVSFESRLMRLADSHGVARDDFLRNYQGSELDPRWLNRVSKLSAKGWKNFVHHEKDRIKDLRQEVQSMAALTGLEIGEFRKIVHSVQKGEREARQAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKIVRTSRQMLNEIGREPTPEELAEKLGMPLEKVRKVLKIAKEPLSLETPVGDEEDSHLGDFIEDKNAVLPIDAAIQSNLRETTTRVLASLTPREERVLRMRFGIGMNTDHTLEEVGQQFSVTRERIRQIEAKALRKLKHPSRSRKLRSFLDN
1408843..1409175                   hypothetical protein; RPA1289                                                        N/A                 RhodopseudomonaspalustrisCGA009MREAPCPPFTPDEAEATPMASKRQLIEVDETTATRLRERADAQGISVAEVVAGLTALAESPVEISPEELAALDRQWAAIQSGEEGVVPHDQVARWLETWGTPDYKPFPMK
complement(1409572..1409895)       PHAGE_Aeromo_Aes012_NC_020879: putative XRE family plasmid maintenance system antidote protein; RPA1290; phage(gi472438177)     7.05e-15            RhodopseudomonaspalustrisCGA009MRPTMRTKTDLRMKSPVHPGSFVKHEIIEPLRLSVTEAAKVLGVTRPALSAVLNERASLSSEMALRIEKAFGVSMDTLMRMQNSFDIAEARKRAGEIKIARYAGAAE
complement(1409905..1410195)       PHAGE_Mannhe_vB_MhS_535AP2_NC_028853: plasmid maintenance system killer HigB; RPA1291; phage(gi971749637)     1.43e-12            RhodopseudomonaspalustrisCGA009MRIRNVLHKGLRRLIEEDDAGGVQAAIADKLRRMISFLQDMEREDELRTVPSWKAHRLTGDRKGAWSLLVTKNWRLAFQIDKDGIELIDLDYEDYH
complement(1410470..1410664)       hypothetical protein; RPA1292                                                        N/A                 RhodopseudomonaspalustrisCGA009MLPRWQAVRNKLIGHVRQAIERTFAQLKGRYGFTRMRYAGITANAFHLDLVSIAYNLRTAAAIR
complement(1410628..1411431)       PHAGE_Burkho_KS5_NC_015265: ISBmu23 transposase; RPA1293; phage(gi327198044)         8.08e-35            RhodopseudomonaspalustrisCGA009MAQDSFIEALLPAGFGRNERLERISGLIDWGRLAVLIRKVRPGETGRPPYEPLAMFKALLLQQWYGLSDPGLEEALLDRVSFRRFCGFALDAQTPDETTLCRFRNALQQAGLGDALFQEVLRQLEAAGYVLKTGTLIDATLVQSSGRTLASGSTPREIESRSSHDPQANWTRHGAGRRLFFGYKAHIAIDQGSGLIRARKLTGAKTYESEVAEDLVLGDEKAVYADKAYEKRARRQASKPAASRIASSIVATSTRRCCRDGRRCATS
1415554..1415566                   attR                                                                                 N/A                 CACCGAATTCATC

#### region 4 ####
2128329..2129489                   PHAGE_Arthro_Tank_NC_041961: hypothetical protein; RPA1892; phage(gi100015)          1.91e-84            RhodopseudomonaspalustrisCGA009MLGGRGAGKTRAGAEWVRAMVAGTPPYATRPHGRIALVGESWHDAREVMVEGESGLLRITPRRERPEWIATRKRLEWPNGAVGEVFSADDPDSLRGPQFEAAWCDELAKWRYAEASFDMLQFGLRLGSRPRQLITTTPRPLPLIKRLLGDPHTRVTRAPTRANAAHLSPAFLETVVARYAGTRQGRQELDGELIEDRPDALWSRDRIERARVAAAPPLVRIVVAIDPPGSSRPGADACGIVAAGRSAAGDYYVLEDVSSDRLSPAAWAARAIALYHRLEADAIIAEVNMGGEMVRAVLHETDAAIPVREVRASRGKFVRAEPVAALYEQGRVRHVGCFPLLEDEMCDFAPTGLSSGHSPDRLDALVWAITALIGGAHAGGPRMRVL
2129587..2129865                   hypothetical protein; RPA1893                                                        N/A                 RhodopseudomonaspalustrisCGA009MSRSITIMMAMVLGLAALGAGLIAGSGAALARGGAANIMDSPGYQRALQESRKRQQQQPGPSMAQPFAAPPVAYPHPERRVGPKRRHRAPRH
complement(2129885..2130196)       hypothetical protein; RPA1894                                                        N/A                 RhodopseudomonaspalustrisCGA009MLRVVLLLLIALPLAQPAARAADLPMHSKIGKIFAEPQPKPRVRQSLEMESGSPVYAPEVDVPPIVHGYYGKPRSYLYRSYYGTDPNLIFGRLPYACGWYGYC
complement(2130278..2130982)       possible peptidase; RPA1895                                                          N/A                 RhodopseudomonaspalustrisCGA009MVGGAPEATGALGRALVTIVGSRGNFCSGTLIAPDLVLSAAHCVGPGADYKVVQYDAQRQPSLRDVARVAAHPEFDMGAILGHRASADVALLKLAAPLPGKAPLPIAAPEDPLAAGQDFTVAGIGVTRRGDGKSGGTARSATLTATGRPGRLQIRLTDPAATDGRAGLGACTGDSGGPALQAQNDRLVVVGVVSWSTGPGNTAGCGGLTGVTPLTLYRDWIARTAQSWGSALSR
2131110..2131670                   PHAGE_Rhodob_RcapNL_NC_020489: hypothetical protein; RPA1896; phage(gi461474967)     3.34e-07            RhodopseudomonaspalustrisCGA009MPMLLLAGPAAEPWTVTDLKSFLRVEHEADDAVIASLLTAARAQIEASTCKMLLAQRWRLVLDAWPRDGRLVLRSGPLRSLIAVRTYDERGYTHGLDLDSFVLDLAGGVIASPPWALPEPGRAVAGIELDLELGYGTAPEDVPPPLRHAVRTLAAQWYDNRGSGAGAALLPGGVAAMIAGYRAVAL
2131667..2131987                   PHAGE_Paenib_Fern_NC_028851: head-tail adaptor protein; RPA1897; phage(gi971749409)     5.28e-09            RhodopseudomonaspalustrisCGA009MIDPGRLNRRLTLLAPVETDDGQGGVVRSFAAQAVLWASVVPLAAREGVAADDSRAALRAKITLRAGVALSRAHRLADGDSVYRIIAWRSRERGALLEIDAETEQT
2131984..2132394                   PHAGE_Rhodob_RcapNL_NC_020489: gene transfer agent (GTA) orfg8-like protein; RPA1898; phage(gi461474971)     3.71e-12            RhodopseudomonaspalustrisCGA009MTPASVALRAAIHHALTSDTALLAALGGPRIYDEPPREAAFPFVTLGEARISDVSADDAPTQEHQLTLHAWSRQGGHKEAHLITGALLQALDDAPLAPSGHRLVNLRFALADIRREPDGRTYHALVRFRAVTEPVS
2132407..2132814                   PHAGE_Rhodob_RcapNL_NC_020489: gene transfer aget (GTA) orfg9-like phage major tail protein; RPA1899; phage(gi461474972)     2.06e-25            RhodopseudomonaspalustrisCGA009MGAQKGKDLLIKIHDGTNYVTVAGLRSRKIAFNAELVDITHAESADRWRELLAGAGVRRASISGRGLFKDAGSDALVRTAFFSGLISDCQVVVPDFGSITGPFQIASLEFAGEHNGEVTFDLTLESAGALGFVAI
2132824..2133141                   homologue of Rhodobacter capsulatus gene transfer agent (GTA) orfg10; RPA1900        N/A                 RhodopseudomonaspalustrisCGA009MANRHRGEIEAELGGHTRTLVLTLGALAELEAAFAATDLVALAQRFGSGHLSARDLVRIIAAGLRGAGEAVRDDEVAAMTVKGGAAGYASIAAELLAATFGEAAA
2133135..2133326                   homologue of Rhodobacter capsulatus gene transfer agent (GTA) orfg10.1; translated by translational frameshift with GTA orfg10; RPA1901     N/A                 RhodopseudomonaspalustrisCGA009GVTPFPWAEAMQLGLGVLRLPPDQFWRMTPRELAAAIAGLRGGAAAPLDRAALDELMRRYPDQ
2133338..2133931                   PHAGE_Edward_eiAU_183_NC_023555: putative bacteriotail tape measure protein; RPA1902; phage(gi589889263)     5.92e-12            RhodopseudomonaspalustrisCGA009MTGSGTGEGCDCACVDDTTQKVDQLTTKTQALSSEAKGFARAMTSAFSQSVTGGKQFEDVLKSLALKVSDLALKAALKPLTTSLATGFDSLFSGLFGGSLLKNADGAIKPFAAGGVIGTPTYFPMLGGGVGLAGEAGPEAILPLARGADGRLGVASSGGATTVNIQIATPDADSFRRSETYLTGQIARAVARGQRGL
2134093..2134731                   PHAGE_Rhodob_RcRhea_NC_028954: tail protein; RPA1903; phage(gi971760176)             6.63e-55            RhodopseudomonaspalustrisCGA009MTPFHEILFPLDVALKSAGGPERRTEIVGFGSGREQRNARWADSRRRYDAGYGVKTFEALQQVVAFFEERRGPLTGFRWRDRLDCSSAAPGAPVSPLDQGIGIGDGTRASYQLVKTYGAGFAPYVRTIAKPAAGSVRVAVGGVEAAAATFACDPATGVVTFAPGHLPPSGAAVTSGFQFDVPVRFDTDYLEVDLSAFAAGAIPKIPLVEIRV
2134844..2136670                   DUF262; RPA1904                                                                      N/A                 RhodopseudomonaspalustrisCGA009MTASQNLLPVYQTLDLPLKSILNEIHQSRWVLPAIQREFVWSDQQICRLFDSMMRGYPFGTFLFWQIEGSTASKFKFYEFMRRYHERDAKTCRELPALGDRQVTAVLDGQQRLTALNIGLAGSRAMKLPNKRRSNNQAYPETFLHLDLLGEGAEQEDGMVYDFRFLTLEKAAEQSKPAENHIWFRVGDSLQLKEGIGIFERVQQHELNRDQQTVAFERLDLLHRLVHKTPLISCYTERVQDLGRVLDIFIRMNSGGTVLSYSDLLFSIAVANWTELDARREVNEIVDALNGVGGGFSFSKDFVLKAGLMLAEIKSVGFKVENFDRTNMATLERAWPAIRQALDLTVRLVSNFGFTGQTLRADSALLPIAYYLFKRKAQQDFLTHSRHSDDRRNILRWLARSYLKASGIWGSGLDTLLTSLREVVATQGTNAFPATQIEEEMARRGKTLSFTPDELDDLVELPYGDSRTFALLTLIFETVDTSKSLHMDHIVPISKFKRRLLLAEGVQEAAIEEWSEQANTLPNLQLIEGAINQEKLAMMPADWLRMREPDDLRREKYIYLHMLEGLPEKLGDFEVFYQRRRRSLQSQIALLLGGSGAESASAPKSSAA
2136963..2137874                   PHAGE_Paraco_vB_PmaS_IMEP1_NC_026608: hypothetical protein; RPA1905; phage(gi764162044)     2.45e-75            RhodopseudomonaspalustrisCGA009MLTIPTALQARLDAGVTTLAQCWIVRRRDGAVLGFTDHDRDLVIEGVSCRAGTGFSASEASQRFDLSVDGAEISGALDDTLLREADLAAGRFDAAAIESWLVDWSAPELRVLMARGTLGEVRREGSAFTAELRGLADLLSQETGRLYTASCSADLGDARCRVDLGSPARRGEGRVVAAPGTSTITVSGLDGFAPGLFTAGRLSWRSGANAGAAVEIKQHRIVGGEVRLSLWQAMAEPIVAGDSFVVTAGCDKLFATCRDRFGNSDNFRGFPQIPGNDFVVSYPVPGAPGNTGEPIGPVLRGDV

#### region 5 ####
complement(4422906..4423826)       PHAGE_Bacill_G_NC_023719: gp309; RPA3919; phage(gi593777765)                         1.63e-15            RhodopseudomonaspalustrisCGA009MSGGAKALLVAAGLGTRLAPLTDVLPKCLMPIAGHPLLGLWLRMLSEAGFSEIVVNLHHHADLVSEYIRRSPWAERVILAPETTLLGTAGTLLRHCGRFSDGPTLFAHADNLSLFDPRAFLAAHAGRPPDTAMTMMSFVTDHPQSCGILTLDPAGRVLEMDEKPQHPKGNLANAAVYIVEPEVIDFIASLGKPVVDFSTEVLPVFMGRIFSFHNGSYHRDIGNPSSLALAQLDYPLAVLASPRHHEEVQPAKQSSPVHGAPELLRLPLAMTATSRDDPWFGLMTDNNVALAIAFAQAAAKTYGSRR
complement(4423823..4425307)       PHAGE_Synech_S_CAM1_NC_020837: bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase; RPA3920; phage(gi472339599)     2.06e-08            RhodopseudomonaspalustrisCGA009MLHPETSTELADIRKKAGRRRSIVFVAGNFNIVHPGHLRLLKFAADCGDYLVVGVTADPGYDWMLPAELRLEGVRAIGVVDHAFLLHDAPEDFIAALQPSVVVKGKEHEGADNPEKAVLDGYGGRLVFSSGEVAFSSLDLIKREFREFNPSSIVKPLDYPRRHRFELLELKNVLAGFPKLRVLVLGDLIVDEYIACDPLGLSQEDPTIVVTPVLRELFVGGAGIVAGHAAGMGAQVALLTVGGGDAMADFARERLASYNVDATILTDESRPTTTKQRFRAGNKTLLRVSHLKQHDVDADLQTRMLETIEHRLPSTDLVVFSDFNYGCLPTRLVEAIGQACRARGVPMVADSQSSSQVGDISRFAEMLLIKPTEREARLAMRDFDSGLVVLVEALREKARAKNVILTLAAEGLLVHAETGSAGTVVTDRLPAFNTAPKDAAGAGDSFFVCAALALAIGTDIWRSAYLASIAAACQVGRIGNIPVTARDIIRELDT
complement(4425313..4426368)       PHAGE_Prochl_P_TIM68_NC_028955: putative zinc-containing alcohol dehydrogenase superfamily protein; RPA3921; phage(gi971760362)     2.09e-64            RhodopseudomonaspalustrisCGA009MSVTFRAAVLHELNRPLSIETVEAPPLAAGQLLVKLAYSGVCHSQVMEARGGRGPDRYLPHMLGHEGSGVVVEIGGGVTKVKRGDRVILGWIKGQGADTQGVRYASGERVINAGAVTTFNEYAVVAENRVTPLPAGLPMDVAVLFGCALPVGAGIVINIAKPQPGATLAIFGLGGIGLAALMACKLFACNQVIAVDVEAAKLKMATELGATTVIDASRIDPVEEIRRLTGGLGVDYAIESAGLTRVIEQAFDATRRFGGLCVFASHPRSGEKIALDPFELICGKRILGTWGGDSKPERDIELLAGLYRDGKLPLDAMFTRRYKLDEINEALDDLEHRRSVRPLIEIDPSLR
complement(4426519..4427571)       PHAGE_Synech_S_SM2_NC_015279: transketolase central region-containing protein; RPA3922; phage(gi326781943)     7.69e-14            RhodopseudomonaspalustrisCGA009MATTFAAAIRDGLATALAVDDDVICFGLGTDDPKGVFGTTLDLHKQFGPDRVFDMPTSEAAMTGFAIGAALNGMRPVMTHQRLDFALLSLDQLVNNAAKWRFMFGGKRGVPITIRMIIGRGWGQGPTHSQSLQSWFAHIPGLKVVMPTTAEDAKGLLLGAIFDDDPVIFLEHRWLHNMKGEVPAGDVRSPLGKARIVRQGDAVTIVAMSYMTVEALHAVDHLAAQGIACDLIDLRSIRPLDWPAVIASVQKTGRLLALDSGHLTGGVAGEIVARVATDHFASLKSAPQRLAAPDVPEATSPALTKNYHVRAEHIAEAVGRMLGREVEIASLVAQRTFPHDVPGTWFSGPF
complement(4427582..4428559)       PHAGE_Synech_S_SM2_NC_015279: transketolase central region-containing protein; RPA3923; phage(gi326781943)     4.99e-10            RhodopseudomonaspalustrisCGA009MNPETSRRLLFDMLRIRSVEETIAARYGEQKMRCPTHLSVGQEAVSAAAGAVLRPTDLAVSGHRAHAHYLAKGGSLKAMIAEICGKVTGCARGKGGSMHLVDESVGFMGSTAIVGGTVPVGVGLSYPMKLNQTGQISCVFLGDAVPETGVFFESVNFAVVKQLPVLFLCENNGYSVYSPLSVRQPPGRKLYELVAGFGLKTHHGDGNDARAVYAALSEGVAAIRAGEGPRFYEFETYRWREHCGPMYDNDLGYRTVAEFEAWKLRDPVPALQRALITEAIVTAADVADMQAEIDAEIEEAFAFAESSPFPPPEDAFTDVYASAAG
complement(4428556..4429215)       PHAGE_Pelagi_HTVC008M_NC_020484: methyltransferase; RPA3924; phage(gi460042595)      7.04e-08            RhodopseudomonaspalustrisCGA009MGQEIDLLVNYPRTKRNVDERGQTKSEEDRAIARRFGKEFFDGDRRHGYGGFNYMPRFWQPVIPTFQQHFGLDASSSVLDVGCAKGFMLRDMAELIPGITVKGVDVSDYAIAHAIDDMKPHLSVASAVKLPFADKSFDVVISINTVHNLVRDDCAAALREIERVARKGAFITVDAYRDDEEKRRMMAWNLTAQTIMHVDEWKAFFAEIGYTGDYYWFIP
complement(4429224..4430261)       PHAGE_Entero_phi92_NC_023693: Phi92_gp067; RPA3925; phage(gi726647000)               1.80e-39            RhodopseudomonaspalustrisCGA009MTGIVPASAPCAMARAGFDKYLVIGSNSFTGASMVSYLLDQGADVVGISRSDEPHPAFLPYRWKKADRFRFQKLDLNHDLDAIMQLVTAERFPCIINFAAQSMVGESWANPDHWFMTNVVSTVRLHERLRICDFLERYVHVTTPEVYGNATGTLTEDAVFDPSTPYAVSRAAGDMSLRSYFRAYGFPVLFTRAANVYGPGQRLYRIVPRTILFIKLGRKLQLHGGGTSERSFIHAADVADATRRIACNGKLGDSYHISTDRIVTIRALVEMICAMMRVRFEDQVEIVGERLGKDAAYKLDSSKLRSELGWSDQITLEQGIEQTIAWIDRWFEELKSQPFDYAHKP
complement(4430258..4431196)       PHAGE_Synech_S_SKS1_NC_020851: nucleotide-sugar epimerase; RPA3926; phage(gi472340882)     6.38e-18            RhodopseudomonaspalustrisCGA009MKILVTGACGYVGTTLVPKLLARGDEVVAFDIMWFGNDLPPHPALTVIRGDVRDTSSIDLSGIDAIVHLASVANDPCGDLDPKLTWEISALATMQLADRAARAGIQRFVYASSGSVYGIKDEEQVTEDLTLEPISEYNKTKMVAERVMLSYAGDMAVQIVRPATVCGPSPRMRLDVSVNMLTMQALTNGEITVFGGNQVRPNIHIDDITDLYLMLLDRPELRGIYNAGFENISILDIAKMVDAQVPTKITVTASNDPRSYRINSDKLLATGFKPKKTVNDAIREIIVKFQRGELKNEDRHYNLRWMQRSLQA
complement(4431338..4432006)       PHAGE_Caulob_Cr30_NC_025422: phosphoheptose isomerase; RPA3927; phage(gi725949171)     3.49e-27            RhodopseudomonaspalustrisCGA009MTQSRNSTAPIPDDVPEDVAATPLLSKRQMLGYYDHLRATLAAAQASDCEGRPFAQEVAASLVIAWAREVHADGRKLMFIGNGGSAAIASHMATDYSKNGGMRALCLNDGAMLTCLGNDYGYEQVFAKQIELFAQEGDLLIAISSSGRSPNILNAVAAARARGCRVITLSGFSADNPLRREGDINFYLASDQYGFVELGHLTICHAILDFACGQRVPLPAAG
complement(4432129..4433091)       PHAGE_Prochl_MED4_184_NC_020847: hypothetical protein; RPA3928; phage(gi472340546)     1.02e-08            RhodopseudomonaspalustrisCGA009MQVIRAHLFQRRRCMTDTAPRADSSAAPAPYAPGPDRILADIITALPELARHHAPGGAAYTAMASAARSAVVALFACGGTDVPFGPFGSISFPYHRMGAVDSLDLFGLDELILFSFYWQNRGRYRRVADIGGNIGLHSLVMARCGFSVETYEPDPEHIALFQANMGANGVTTVRVNEAAVSAQAGEAEFLRLRGNTTGSHIAGAKLDPYGEIDRFKVRLAAFDEIAAKADFAKIDAEGHEAVIITSLPRERWATIDVMLEIGSDANAAAIFDYARGAGVQLFTQKTGWRRAETLADLPTSYKQGSAFLTAKDAIPGLPPS
