gi|00000000|ref|CM001824.1|  Stenotrophomonas maltophilia EPM1 chromosome, whole genome shotgun 4787769, gc%: 66.34%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

#### region 1 ####
complement(901557..902156)         PHAGE_Burkho_Bcep781_NC_004333: gp15; EPM1_0535; phage(gi23752326)                   3.51e-17            StenotrophomonasmaltophiliaEPM1MNKIPSALIAAALHVAPKNDVRFYLNGVLIESHADGAIIVATDGHRMLVVRTSLPWDIGKIIVPRNACELVAKMKGDVYFSAVGDASRFKAERGGQAIEFAAVDGTYPDWRAAVSKPNELKLSGFAPAVLEGVVKAAGVICKAFGGKATSLIPVTGGDVAAMFGIGGITDPSIRCASLIVMPMRDSSYPEALCSDALRA
complement(902221..902391)         Hypothetical protein; EPM1_0536                                                      N/A                 StenotrophomonasmaltophiliaEPM1MSTNGPLEDLQVRKLTAEIRKINRESDKLMMETRWYPLVVATAFVAGIVTLTKLFL
903811..904026                     Hypothetical protein; EPM1_0537                                                      N/A                 StenotrophomonasmaltophiliaEPM1MRSWNEQIIENDASPQVLVDEAVRTFDAATNDLISNRNSRNLFLQLALGIPALAWIGAGVVLWVIKDGTEV
complement(905086..905538)         PHAGE_Xantho_Xp10_NC_004902: putative peptidase of the HslV family; EPM1_0538; phage(gi32128463)     1.81e-13            StenotrophomonasmaltophiliaEPM1MTTLAFDGRLVAIDSQVTAGDLRYEEEKFYRTTDTTGRDLVVFGAGTTSHIQRAVRELSEGFDELTKGEYTILVVGLRDNPVAFYHDGLPLDLRRDFLVAGSGGAIALAAMKAGHNATEAVLMACSTDLYSGPPVQTYDTVTKRFLKRRT
complement(905535..905843)         Hypothetical protein; EPM1_0539                                                      N/A                 StenotrophomonasmaltophiliaEPM1MNFKTIYNRASERLVRAYERAKGYVALRIALASQWLLERLRETSRRTYTGWLFVVVFLALPYVVLGGLWEHLRNAAERLWDDVNDIEWAAFTPSYWREHIKQ
complement(905853..906245)         PHAGE_Pseudo_PEV2_NC_031063: hypothetical protein; EPM1_0540; phage(gi100051)        6.83e-38            StenotrophomonasmaltophiliaEPM1MLLAIGLQESRFEHRRQIKGPARGFWQFEAGGGTAGVLRHPATSARASQLVSARLERPSTAAVNEALASDDVLACAFARLLLFTDPRPLPALGNPQAAWDYYVRNWRPGKPHRDTWDALYAKALATIRNT
complement(906347..906538)         Hypothetical protein; EPM1_0541                                                      N/A                 StenotrophomonasmaltophiliaEPM1MSNTLAAWLMALAAAGLLYLFLRRKNDDDNDGPSAPAPVTPCDCNHAPCCHTQGGQSNPYAPV
complement(906547..908220)         PHAGE_Mesorh_phagevB_MloP_Lo5R7ANS_NC_025431: putative DNA maturase B; EPM1_0542; phage(gi712913297)     0.0                 StenotrophomonasmaltophiliaEPM1MEGMTSLHVRHPFEDFRNFAWYVWKELGLPSPTPIQYDICEFLKTGPRRRVIMAYRGVGKSWVTAAYVCWLLWKDPQHKIMVVSASKERADAFSVFVKRLIETLPELQHLRPRPDQRNSNLAFDVGPAQPDQSPSVKSVGINGQLTGSRADTIIADDIEVPKNSMTVVQREKLAELVKEFDAVLKPGGEIIYLGTPQTEESLYNKLPERGYVIRIWPARYPKDTKHRQVYGDRLAPMIADAFDANPKLAWKNCESVRFSDEDLMEREASYGRSGFMLQFMLDASLSDAEKYPLKLSDLIVMDVDREVAPIRVVYSSGPEYIVSDIPSVGFTGDRLYRPMYLASEMEEFTGKVLAIDPSGRGGDETGYAVVGMLRGMLYARRAGATKGGYDDDTLETLAHIARAEKVSAVLIEANFGDGMFAKMLSGVLARVYPCSIEEVKHYGTSKENRIIDVLEPVLNQHRLVVDASIIRADQKSEQKYQLCYQLTRITRDRGALRHDDRLEALAMAVKYWADQLSRDVSKEEQRYLEELLDREYASFIQSVTGRMPSPDNYLDIL
complement(908220..908444)         PHAGE_Pelagi_HTVC011P_NC_020482: DNA maturase A; EPM1_0543; phage(gi460042367)       9.89e-07            StenotrophomonasmaltophiliaEPM1MERLHAAVADKLADTIDSMESDAKGLASILNVARQFLKDNGIDVAATPPGSPLGKLADKVSEFPFDPAEDGRLN
complement(908462..908731)         PHAGE_Escher_phiKT_NC_019520: phage holin protein; EPM1_0544; phage(gi422936637)     9.39e-08            StenotrophomonasmaltophiliaEPM1MHDEVKLVGALAGVGLIVGIAKMLTSNDPITWKQALGRAILSGATGLAAGAIVIFIPGVSFVAQVALACILASLGTSALETVLNRVVNK
complement(908758..909207)         Hypothetical protein; EPM1_0545                                                      N/A                 StenotrophomonasmaltophiliaEPM1MIRAEFGGGYPIYADQYYRGRGLVPDVPANYGVPTSGPIYASQFYNAVKATPFQASLSPSYLMGNWPQSTNGTVSESFSVYCSGGTGNYSVVSRSVTGGASISGSGLGGTVTASGRNTSRMGQFTVVVTDGVTQITLTGNYEYSFGRPL
complement(909243..912047)         PHAGE_Tsukam_TPA2_NC_015210: putative tail fiber protein; EPM1_0546; phage(gi326425064)     5.48e-15            StenotrophomonasmaltophiliaEPM1MSTTPGYVSNAELASRLSTLVDRWNRRENQMIALLTQEEGTVVVTDGLGNNHTLPSFPQLQKDVAGLTDELTGSVVQVRDLVSVATGMANAAQASADDASGFADAAEASAVRAAESAASIDDDVQATADAATFAAAKAAEASDSATEAASSAVDAAASATASATSALASAGSASQAGTSATAAGQARSDAQAAATAAATSRDQAQTILGYATDAADRAEADATAAAASAAAAADSATAAATSVTQATTQANRAEAQASAAATKAGEAAGSATTAAGHASAASGSASAASISAQTASSAKAAAEAARDKAGLYANAPQGTEVSPGEFSAKHWAAQAQAAVTGSLVYMGSWDAGTGAFPANPVKGHFYKVVGEGTVGDIHWRVGDQALYGATWEKIDNTDQVTSVAGKQGDVTLVAGDIGGLGALATRDDVDFNTHVTGKPTTYPPSTHTHTKAQVGLDKVDNTADLDKPISTATQTALDGKAAATHTHTIANVTGLQSALDGKAAASHSHTIANVTGLQAALDGKSAIGHTHTAAEIANVVNVTDDQSIGGVKTFASGQIRVQGFGGEATSGVMYLGSLDRYVYVPPAANSLEFRFGDGTGGVASLNAGGTVWTSANFNPAGKADAGHTHTIANVSGLQSALDGKASLGGATFTGQVTLAYGAPLRLTGMGAAGTAYIHGTNGAGDDVCSITRVNTNSWYNLYWNGAANIAGRLTVGDQIYLNAGWFRSQQSGTGWYSEAHGGGIWMQDSTWVRTYGGKGFLIAGPGGSGGDLRLESYSPTITCYDSDNGTTHWLHCNDNNHGFLASNAFSWCAYRDGSNNWVATGNIVAYASDARLKKNIVDASASKVADFFDRFRVREFDWDAKAIAELNPTFHPSADHEVGGIAQEAEEVYSLMVATHANGIKTIQWEKAIPFLIAEVQALRKRVADLGGGA
complement(912073..914610)         PHAGE_Pelagi_HTVC011P_NC_020482: tail fiber; EPM1_0547; phage(gi460042359)           1.56e-07            StenotrophomonasmaltophiliaEPM1MIELSRGLSFVLYTYEGGPTRFTVPFPYIAREHIRAFVGEPDAARAVSVSWVDASTIEIPSQDGVLDAPYTVTIRRFTPIDALLVNYKEGANLPARDLSKSFRQLLYAHQELAEFGGGSGLPGGGPGNPGGDPDLNAIIEQLLRSPALQDLLTRIDLIDVNAEAILEEIMRSHEFFDVQRDYGDKISTATHEIGLLTEGNKVIAQQIIDLFARVDYGEQSSQARFLEVNRAIADERSARVEAITELQGQVVENGKTISAALNQRIDEVESTTEAARAATEQRLGAEIEDSAAQVRTAVMAEVDATKARVSDVETAVVRHGENIAGLAETTEALTDAEGANTAFRQQMAASYGANVPQGIANEIDGQVSAVSAAFEQRIDTEASAREALASQVSTLETSTAPTIFSDAQPSPPAGGFKVPTFWVKTVQTGAYLTQIWDGTGWRKADLDVTSPTGALVQQLNTTKITAEQAQAIAATQVQAFKDGDFATIRQEFNVVAGQHSGMYGQWQANYSVKINAGTINGVPVVAGIALSANPQTGSDFIVTADRFAFVHPQYTSGGTLASIKYPFVIGTVGGQSTVGIQGALVVDGTITADKIRVNSLAALTANAGTINGGTFKTHTLDGNGNIVNAAEFRVEISNLGDWPLWVGSGAKNANNAVFYVDRNGGAFFRGRVNAPNIVGQFQSATGVWWTGATSLCYQAGNNFIPLGDWVAIHEFWLGAPVLAGEGHTPSVSVTVTANTRVYGLHVILEELRDSVWVVIASHEPPMYRALIQQMGGDGNTFTASNFYTYEQSVTLSASGAWTGGARAFRVRCRASSPPPQVHGYDAPAYPNYLITSIGGFAFGIR
complement(914650..917814)         PHAGE_Mesorh_phagevB_MloP_Lo5R7ANS_NC_025431: putative internal virion protein; EPM1_0548; phage(gi712913290)     8.03e-43            StenotrophomonasmaltophiliaEPM1MFESLPGADENIVKPATQQPIVQAVRERKEQREAAERRKDQTTVWDGWGAAQAKGGIGFIDRFITELGYEPQQGYRIPADARKRWESMGLRPEQWELFGRATSDEHLSYLESVAFMNQMADDDLAQFGLGGQIALGFTDPVATGLDLATGGLGYAAKAGRLANAVRSGLQAAGTSALMSAATSTYDPEQTLADGVQSAALSFAFGGALGARRGALFDGEVKPDVVKRLAGDDSLSAARVAGTAANDLTPGVLPLRNESAFEQEFTDKALVNAHITPHFATVRRDLAARMGSAKSPLVREAGRLLFRDGVGYTDRSVAVQESTSEFAKRHLAVMETEWRSGVNAAWDAYKQRTGTHWWNFSERAKFNEEVGRAVRGAPDVSPEAAKAAGSVAKAMRDALKLAQDSNLDGFANVAQNGSYLPRYWSGKGFKRLFGEMQLHQDDVIEQLIKPAMRRAWEATTDEGDEIDDELLGAVARSYLKRAQANFEGDGMDLLVRPLDSDSVEEIGNMLTEAGVSPVRSQELLSKLERKTYESGKLDRAKKRIDLDETYSTTIRNEAGEDVQVSMADLFDNDVDSVMTRYMREITGWSALSSKAGIKNRAQLDRFVSKLKSDARKSGDDVKDIERLIDIGLKSTFGRSTELDPASRGARYARFLRNWNFARVMNQVGFSLFAELGPTIAHAGLRNFWNSVGAARDFLVRGADGKLSSQEARVMERLFAPGTDWLRNPPFLRLDEDALVPQTFNVKHGEKIDNAMNMATHVTSVASGMAPINTMLQRIAGRATLLRLLDMANAKKLSDAEVARLRTWGLDEKAQADVFGYLKGKRQIEQIDPDKLPFQTRERMAAFLFRVTRHQVLEGDASDSIELMHSTTGRIVTQFRSFMVNSYTRHFLNSVHHYDDWRTYAMVVLSTSAAGMGWAARTYINTAGNPEQRKKQLTQENFYKNAVAQSSWSNVIPAVTDAVWADALGNDPVFANNRSTGLENGVMGIPSIDLFNKVYGSTRMIGSAIRDDEEITEKQMRDFWKIWWFNNMTGVRNIADQALQQFPDRKDGTDRP
complement(917821..919773)         Hypothetical protein; EPM1_0549                                                      N/A                 StenotrophomonasmaltophiliaEPM1MQEDAEGTPRQAEDFVARQSESWRRGYLKADGIIRVRDWQIEAAKEIAKAEPGTDIEPLIKERMAALTQNPEFQDPQVRKALMPVAMRAAQQVRQQWQADSMREMLVRQKESLTAIIRDGIKGGTFLTSEGMNGLYAMLDQEEYAYLNKRDVDELYVEAAKEELAAGNRDPQSILAFLEQDRGDGQPGLMNTEHGDELRAAAAAGARVIAHREDEARKQAMAEAEWTLQGLADRGQLTHKTIDTWASKFGLSGGDLQSFKRYWNNQQEQTLRRWEQEAKERAREERIRKLVAGGNPYEISDADLKKQAGKEWEETPQAARGQVLQKWARQGIVIPQLERILKRADPAFQENFQNAATLYEQLRKVSPKYADTVAGGEAAAMLDQYLYDTRRSGQSHQEAARVLTQPKREVEEARSVINDTWKSGIKDYLEIDGKPRDPRELHRIRQEAERIASRGGVSGEAAIRAAVGQIDAQRTTVNGRRVPNIGMPQGAEPAVDELIQTVARKLGRDPDELSALPNPRNPGQWQIVGPDNWLIPDPDTGRAIGFDPRAIAAQHQRWKGDLAESQARRRVEQRTTWADQSRNIRDLRSQSATTEVPAAIAKRDASAAEAPAFELPKFDLTKPLVPNAGTKQTTTTPAVPEDFLEYLTRK
complement(919999..920388)         Hypothetical protein; EPM1_0550                                                      N/A                 StenotrophomonasmaltophiliaEPM1MYGQDQNNKAIEEAAERQQEQINDQAAERTQQRMEEARALRSAMRASAAEAAVSGNSVELLANDIMAQAGRDVALIEKNRRNGVVESGSEARARIRTGNAEALGGVMQSGANAYSNIQTYKRYSIPGDE
complement(920430..920903)         PHAGE_Pelagi_HTVC011P_NC_020482: hypothetical protein; EPM1_0551; phage(gi460042355)     1.05e-17            StenotrophomonasmaltophiliaEPM1MTLTYRSPTASDILHVAENMRQEDILEVAASHGHTPLQALAFAVTASDRSFAAMHDGSPVCIFGFSQHAEGIASVWLLGTDALVAPTFCRTFLREARRISDEWSATFGTIFNFVDVHAVTTRRWLGWLGFRESGVESAYGFAKTPFVRVTKTPCATP
complement(920900..923032)         PHAGE_Mesorh_phagevB_MloP_Lo5R7ANS_NC_025431: putative tail tubular protein B; EPM1_0552; phage(gi712913286)     1.18e-64            StenotrophomonasmaltophiliaEPM1MPLITGDYPSFLGGESQQDDTVRSPNQLTKAINAWLHAAMGAGKRPPAEFVAGLGVTLDHDCAFHSIVRDENERYIVAVGHRSIRVFDHETGKEYTVNATGDALNYLDTQGQRAWSCFALATFSDTTFIVNRLVDVKQSDELSPGSLYGSAQTMSDLPKPGDKGSAVVPTGAIYNIIGSSESQFDDYYVQKQSSSVYLEVARPGIKHRFDAKTMPHILKRIPDPVHADGFWFSFGGPEWTARLAGDEQSNPFPSIDGQRIREVFKHRDRLGFLAGENVLMSEVSDPFNLWRTSVTQVLDADPIDVSVSGSNGVTTLYHAVPFQSALFLAAAGGQFLLTAEPYLAAKNVKSDPVNSYSSSPYIRPKLMGESLYFTEDSGAYASVREYFIDDLSVTGDAADVTAHVPKLMPGRMRAMASASGADCVFFAPDEPTDAQLYVYFVRWIGDEKQQSAWTRWSISGVGRIVHMHAINDVLYAVAEAPGGGCELLKFRMVLNQHDTDATGDYNFLLDRMLVVQPTYQQFGNETWIDLPYIVPDGMTVTVLKTDDWQDPGAYLDITKARWDNARTRLALPGNHTEGRVVVGMDYEHRLTLTKPIVRGGQNQAVLVGRTQVRDIEVAYKDGAYFELEVEQHGNGRVETYVASHSGAYTARVLNDSVFRTSAPTFHSGSRRFPVLGDANSVRMHLVNRLPFQCWFQSAQWRGMFVSRSRV
complement(923032..923622)         PHAGE_Pelagi_HTVC011P_NC_020482: tail tubular protein A; EPM1_0553; phage(gi460042353)     3.57e-24            StenotrophomonasmaltophiliaEPM1MNLELTPTTELEAVNVLLGAIGEAPISDLEALGNLYASQARDTLRAVSREVQTAGWWFNTSESFTFTLNAEGKVLPPQSILKLVPARGSEPLVIRGTRLINPLTLADTFSSAPTADFVTWFLAYEELPESARRYIAVRAARLFQTSVLGSDQLYVFTEKHEEEAYLIFAQEHADFTYARGHNFLSGSTDVSDIWDR
complement(923722..924675)         PHAGE_Pelagi_HTVC011P_NC_020482: capsid protein; EPM1_0554; phage(gi460042352)       8.35e-61            StenotrophomonasmaltophiliaEPM1MSDAIPSRLGQAQANGDAWALFKQNYTAETITSFVENYKLDGRVSVRNIESGKSASFPNVGTIGSEYHVPGTEIKGLVVEHNETIITLDPMLISHAFIANIDEAMNHYDVRSEYTRQQGAELALKRMQNELRCAILAARTTEGKVEGQPGGAIIKAATMASDPTVLADAFRNARMLFDEKLLPDNPQEFTGALAPAQWYLLTENKDLIDRDINAESNGSYGQAIISSVARIPLVKINAMPRVDESALASIPAKYRGNFADTVGVIFHRSAVGTLKLLDLSLEDVYQGEKQGTLMLAKYALGHGILAPRGAIELSKAP
complement(924702..925487)         PHAGE_Pelagi_HTVC011P_NC_020482: scaffolding protein; EPM1_0555; phage(gi460042348)     5.29e-32            StenotrophomonasmaltophiliaEPM1MSQPGKSEVTVSLDGINGQPTPGQQPPQNSQDTQQPAPGAQGGTDGERLFGGKYKTVEELEAAYAQLSTPADDKGGKGGPATIDDATADDARDALARAGLNLDDFATEFNSNGSLSEESYKKLQDAGYPKELVDVYVDGLRARVQTYENAVYSPAGGKAGYDGLVQWAKTNLSAEQKRAFNEAVQSGDAGRAALAVQGLVALRGGNGRLLNGKTASNADAGPKPFQSQAQVVEAMRDVRYHRDPAYRAEVSARLAVSPLFK
complement(925487..925630)         Hypothetical protein; EPM1_0556                                                      N/A                 StenotrophomonasmaltophiliaEPM1MSNETTEKPAKPTKEAPKAPSVERKGKAEITRKTNGLVIVNYKPEDK
complement(925647..927203)         PHAGE_Vibrio_ICP3_NC_015159: head-to-tail joining protein; EPM1_0557; phage(gi325171309)     3.11e-94            StenotrophomonasmaltophiliaEPM1MADAKQTSAEKQTAAKRYGDLKSNRKEAETRAKRCAKVTLPRLWVDEGAKSRTPGSAYIDTGPKCVNALASKIVLAWLPPNASVFKLAPDQAVAENIAEQAGVETSELEAALVDVERVIVNDLETSGVRPVLSEAAKHAIVLGNFLLYDPDEGKPKLYPLTSYVTDRDGLGNVLEIITLDKIAPAMLPDSIRAAVMQKLAQERDEKTKNDDVNLYTWVRRSEDGKEWEVVQEVEGVEVPETVGTYPIDACPWIPLCAPPSLVDDYGEGLVYDYVGAFESLEALRKAIRKGAAALAKIIMFLKPTSTIRERQLTEAESGAVLRGEASDVTTLQLQKAYDLNFVRQEAEGLANSLELIFGVKSAVQRPGERVTAYEIRVLTQELDDALSGFMAMSGEQLLLPLIRRRLHKLQKQGRLPELPQELIKPRITVGIAALGRGHDLNKLIEFGQAVDALVGAEEKARRLNSGEAISRLAAASDISTKGLIRSDDELAAEQQDASAQEAMVRAAPNIASAMTQTP
complement(927196..927348)         Hypothetical protein; EPM1_0558                                                      N/A                 StenotrophomonasmaltophiliaEPM1MPDQQEKDPILLTRQDTQPTGHAADQRRKSKVRLDLNNATQYQGLTIPNG
complement(927369..927548)         Hypothetical protein; EPM1_0559                                                      N/A                 StenotrophomonasmaltophiliaEPM1MQIPLHSYDLIDLLDELHPEVIYDPAKPKEEFLLRQGERRLILRLKALRKVEQMEHRAR
complement(927613..928149)         PHAGE_Acidov_ACP17_NC_041997: hypothetical protein; EPM1_0560; phage(gi100100)       1.74e-28            StenotrophomonasmaltophiliaEPM1MKIIGITGRARSGKDTLAEFLVSDHGFVKLSFAAPIRAFVADITGLPVSAMEDGPLKEEPLDWLNGQTPRRLMQTVGTEWGREMIDRDLWVKVVAQKIRQARRDGAAGVVVSDVRFDNEAQFIREWGGQVVQVLRDSAAPVSAHASEAGVHGDLIDTVIDNNGPIHRLRMVAESLARL
complement(928552..928758)         Hypothetical protein; EPM1_0561                                                      N/A                 StenotrophomonasmaltophiliaEPM1METLILFITIVAVLAVLFAFVAYGAAWLWWRSLNTLERTLYRSAGSVKLWPAAVGVAGAAWLIARCFA
complement(928746..929597)         PHAGE_Pelagi_HTVC011P_NC_020482: exonuclease; EPM1_0562; phage(gi460042342)          1.25e-29            StenotrophomonasmaltophiliaEPM1MAVGGRMNKRGPLLLIDADVLRYQLAFSNTANIDWNGDGNKVEAIQPERAKAKLEDYIDEIVEKFGARDYLLALSCKKHNFRKDIDPTYKLNRASKDKPALWYVLDEFVYDEFGDKIVEIENLEGDDVLGLLASHPNPKRAPGSRIVVSIDKDMQTIPGIRLYNPNRPDVGVRPISAHDADLFWMKQVLTGDQVDNYPGFPGIGHKGADELLMPIHEAYRDASVEEHLGALWNTVVTTYTTRIPRGGTEPLSKHDAIRQARLARILRYGDYNPKTKEVKLWKP
complement(929576..929725)         Hypothetical protein; EPM1_0563                                                      N/A                 StenotrophomonasmaltophiliaEPM1MTSYVTYRPPQAAGSWVIGGNFFVQVRERPNWLHRWFALAFLGWQWVDA
complement(929722..930033)         Hypothetical protein; EPM1_0564                                                      N/A                 StenotrophomonasmaltophiliaEPM1MKRALLILALCAGLAACDMKPWPPSADYGSCLKGHSENSYIIMWQSMCTGNSCTQIPYTIPTTDFVCDEHEYPLGDGPEYQAGMKRYAAELQAWYERYPEKRP
complement(930030..930278)         Hypothetical protein; EPM1_0565                                                      N/A                 StenotrophomonasmaltophiliaEPM1MNENRLRVHFIGGPADGDVRVIDPCTTYRVAVLEHQPEVHAYNAKCPCCTERMLRPVEWSTATYFIRRVSEKCWVAVHESMV
complement(930275..930400)         Hypothetical protein; EPM1_0566                                                      N/A                 StenotrophomonasmaltophiliaEPM1MADPTTTTYDLYRFGGNAEDGLQRCNADKASALEVLKESNR
complement(930429..930794)         Hypothetical protein; EPM1_0567                                                      N/A                 StenotrophomonasmaltophiliaEPM1MNPTNILRALAALLVVAALAAGGFAAWKYTAMAQRVTELEESAKELADLKQTVETLNREAVRRSAFDAALRNARATTNRSVEIAANADPETGDYLSRRIPDELRRAHLESRAGAVPPADRH
complement(931111..932844)         PHAGE_Pelagi_HTVC011P_NC_020482: DNA polymerase family A; EPM1_0568; phage(gi460042339)     2.62e-157           StenotrophomonasmaltophiliaEPM1MTVRQAVERLKKAKRVVGHNIAGFDIPAIAKVFPDFKVQAYFDTLLMSTLVYPDLKDRDFKARKKQGANPVLPGKLIGRHALEAWGYRLGRWKGDYAAQMAARGLDPWAQWSQEMDDYCDQDVAVTQALFALLMSKGLPTEAIELEQAVAPILSRQQRYGYLFDQEKARELECILVSRRTALEAELRKVIPPWKVVKRKFVPKRDDKRRGYVKGVEVTTYKDVVFNPASRQHIADRLTAMYGWQPQEFTEKGQPKIDEEVLGALKFPIIPLLLEHFIVNKRLGQLAEGDEAWLKAIKKDGRIHGSVNQNAAVTGRMTHSKPNIAQVPKVQHSKEKGILKGQEGGYGFECRSLFCVPTGKLQVGADASGLELRCLAHFMAKHDGGEYAKVILEGDIHSVNQSAAGLPTRDNAKTFIYAFLYGAGDAKLGSIVGKGRQAGAKLRSKFLAGLPALEKLVRGVKKRAAEKGYLIGLDGRKLHIRSDHAALNTLLQSAGALVMKKALVILDADLQAAGLVPGVHYEFLANVHDEWQIEVDEDKAEFVGKTAQAAIRKAGDYFGFRCPLDGEFKIGRNWAETH
complement(932998..933648)         Hypothetical protein; EPM1_0569                                                      N/A                 StenotrophomonasmaltophiliaEPM1MTAEQHARSLFDVLPAEVRHLVILGGGSLRAFYDGTEIKDIDCFFVSLASYTYVAAYLSGRNDWTSEAAPNGIRNFRSPEGHLVSLIGFEFGTPHEHCARFDLRCCAHVAIYEPSTDEVVVVSLEGAVADASEKLLFVLNNNGTERTIRRITHYVEDYGYTLHPDQPEQDELFEDDDFPGHAPQGVHTPPKAPEPEYILRARRRVRAIPVTNHGYP
complement(933659..933907)         Hypothetical protein; EPM1_0570                                                      N/A                 StenotrophomonasmaltophiliaEPM1MKEIVAIAIDLLTAPFRKDTVTDVVKVLEGQVDKLFKISADRIATASTLRDKADVLHSQADEHEEEAERALRVAERFTNLIR
complement(934073..935539)         PHAGE_Mesorh_phagevB_MloP_Lo5R7ANS_NC_025431: DNA primase/helicase; EPM1_0571; phage(gi712913265)     3.87e-151           StenotrophomonasmaltophiliaEPM1MSDFAKGEPQALAKRGITEEACRKYGYWIGKDKHGKTVQIANYKRDGGIVAQKLRYPDKKFSFIGDSKACGLFGQHLYEPGRRLVITEGEIDALSVAQALGLRWPVVSVPNGAQGAAKSIKRELEWVNGFDEVVLMFDMDEPGQAAAQEVALLLTPGKAKIAQLPAKDPNELLQRGDAEAITRAIYEAQTKRPDGVVTFGSLKEKALKPVSMGMPWHDPRLTALTYGKRYGEVYTFGAGTGIGKTDWLMEEAAFIAQETGDRVGLFFLEQQPVETAKRMAGKVAGRRFHVPDGSWTQEELEAAFEILDKGQVFIYDHFGSSEWDVIEAKMAHMVVAEGVKHIVLDNLTSFAAGAEDERKMLEDTMAKIAQFAQRHLICIYLVSHLATPEGKPHEEGGRVMLRHFKGSRAIGFWTHFAFGLERNTQAENEAERNCTTFRVLKDRFTGQSNGQVLYYSYDHASGRLLNADAPGEYGDFADESSDVSTSDY
complement(935691..935870)         Hypothetical protein; EPM1_0572                                                      N/A                 StenotrophomonasmaltophiliaEPM1MTNTATTVIPSAMRLAFERAWARADKPFRGLGRTVKGALNRRLGISYRKRMWSVERAKR
complement(935867..936253)         PHAGE_Mesorh_phagevB_MloP_Lo5R7ANS_NC_025431: hypothetical protein; EPM1_0573; phage(gi712913242)     2.10e-11            StenotrophomonasmaltophiliaEPM1MKPLPPQTQVVLDHLRRHSHLTSWQAEGVYRIRRLASRVDELRAAGFEIETQTCEDASGQRYTRYRLSRRQRRSKAPLLEARRAPKQYRVDALLQLYRNYCTDELGLDANDATEEVAAFTKFLLEKNA
complement(936265..936627)         PHAGE_Yersin_Yepe2_NC_011038: lysozyme; EPM1_0574; phage(gi194100481)                2.74e-22            StenotrophomonasmaltophiliaEPM1MRLKPLESVEALFVLASMTRPEQVTTGEELARLHRSQGYSKIAVHFVIERDGSIYDGRPLNQPGALAGKHNQSAYQVCLLGGVNDAMQPEDNFTEAQHAALRRLLAAYGKPVVWAPDFPR
complement(936628..936975)         Hypothetical protein; EPM1_0575                                                      N/A                 StenotrophomonasmaltophiliaEPM1MPASRPKVSRWGVYYGKTYKTWKEAAEKHLPAGDLDLSPTDPVLVVIIAVCKRAKTSKAAFPKGDVDNLAKGPMDVVTKATGYWADDKQVMWLLSGKRWAQPDEEPRTEVHLYKL
complement(937049..937714)         PHAGE_Pelagi_HTVC011P_NC_020482: single-stranded DNA-binding protein; EPM1_0576; phage(gi460042334)     7.20e-20            StenotrophomonasmaltophiliaEPM1MATKKRERFVSPKGTAVWPRLNEPDTKFKPEGEYTVSLAFDPNDKDFKALAKKLETRRDELFQEFLSENPKKKKGAEVAPVFTEETDENGDDTGRVLVKFKMKASGVSKRTGKKFTMRPDIFDARGKKIDNPPQIGGGSELKVSYEIGGSFVESAKKFYLTCYMVAVQVIELVEFGQRNAKDYGFGEEDGYEAADSAPFSDSDDDSDDDSDSDDEGDDGDY
complement(937714..937875)         Hypothetical protein; EPM1_0577                                                      N/A                 StenotrophomonasmaltophiliaEPM1MMRDPITDAFIDEALIGFDIDEAFGISADTPLTAAADLWRAGIYLPTNYETDN
complement(937872..938156)         Hypothetical protein; EPM1_0578                                                      N/A                 StenotrophomonasmaltophiliaEPM1MRDRVIDGLHSRSAESAARGAFVVIDSVQSLGHPADQVIGLACAFKNFCEVLGLDPMEVLRVVSRMEQDCRYRQVNTLNAVRRYAERELKPHYP
complement(938149..938292)         Hypothetical protein; EPM1_0579                                                      N/A                 StenotrophomonasmaltophiliaEPM1MSINYQHALNTYVAQDHFGVVLGIYNPAEHGTVEEFKHRMTELHAGA
complement(938337..940772)         PHAGE_Mesorh_phagevB_MloP_Lo5R7ANS_NC_025431: DNA-directed RNA polymerase; EPM1_0580; phage(gi712913252)     6.37e-178           StenotrophomonasmaltophiliaEPM1MTTWQENDLHAAQLELEKESTSLGIARYEKIREQRQEAETGPGRKLVMESIDATAAAIMAFVAEADTGKPGKRHAALKFIRHLNPHALAYLTSFTCVNALVADHRKAVSVAITLGHEVANEINFSLLREKHPGLYRVVQEQLKKSTSARHSTAVMRHVIADAEFAPEDDKRLYLSDKDALLVGMKLIELFVEATGLVELVTVAERGKRHLLIAGNQKVLDWLTKAHDSAALYQPVLMPMVVPPRPWTTPRDGGYLTDIGGRADLVRTRNRAYKRELALVDMPNVYQALNAIQATAWKVNVPVLEVMRELWNAGGGVAGLPERELMDLPSRPALLETDPDYFKEHHADEFKEWKRDRAKVYEANARSVSTRLAAAQKIALAEKFAEYPAIYFPHNLDFRGRCYPLPPTLTPQGDDAAKGLLTFAQGVPLGEDGAYWLAIHVANCFGVDKVSFEERVAWVREHEEQILDSALDPLDGQRFWMDADSPFCALAACFEWLGYSLNGRDHVSHLPIALDGSCNGLQNFSAMLRDSVGGAATNLIPQPKPADIYSRVKDVAQEKLRARAESGDPLAIKLDGQLTRDIVKQPVMTLPYGVTKSGMRAQVLSKFKKLGMEDDWETAEYLATLLWECIGEVVIAARAAMDWLRDASKVASSADLPVSWTTPAGFPVLQEYREEEGVRIRPHVGGREVNLVVNIGGTKLDRRRQTLGISPNFVHSCDASHMMLTTCLAAENGIESFAMIHDSYGTHAGQAAILAAALRQAFVDQYSGDVLADFRQQLVEQLPPEAAEKLPPLPPHGDLDLSLVLESRYFFA
941336..942631                     Cell division trigger factor; EPM1_0581                                              N/A                 StenotrophomonasmaltophiliaEPM1MQASIESTGNLERRLSFSLPEDRLQSHIVGRLGEIARTTRIKGFRPGKVPAKVIEQRFGAQVRGEALDGLLRETFDAAVREHDLRIVGSPRIDKGDEGEFSFVATVEVVPDFGDIDVSKLTVVRHTAEITDADIDQMIENLQNQRRTWAPVSRGAQDGDLVAVETWSQAGEERLPAEGTEKGSIVLGQGMMFETIEKGLVGLAKGEEKTLDVEFPADWRVPVLAGKTVQVTVKVAEVSEPVVPAVDEAFIKSFGVKGGDVEQFRSDIRANLERELKGALMNRLRREVGEQLIAAYSSVEMPPRLVENEARAMLAQQVEQIRRNGQNVGEIPADAHEGFKEAAAKRVLVGLLVGEVARINDLRLEAKRLNETMRLIASTYEEPEQVIEMYRNDPQLMSGLQNRVMEEQVIDWIAERAQHTEEKLSFQDAIRQ
942708..943334                     PHAGE_Agroba_Atu_ph07_NC_042013: ATP-dependent Clp protease proteolytic subunit; EPM1_0582; phage(gi100676)     2.13e-77            StenotrophomonasmaltophiliaEPM1MDNRTKALNLVPMVVEQTSRGERAYDIYSRLLKERLIFLVGPIDDHMANVVVAQLLFLESENPEKDINIYINSPGGVVTAGMAIYDTMQYIKPNVSTTCIGQAASMGALLLAAGEAGKRYALPNSRVMIHQPLGGYQGQATDIDIHAREILTLRSRLNEVLAKHTGQSLETIARDTERDNFKSAFEAQAYGLVDQVLERRPDESIQAG
943461..944750                     PHAGE_Bacill_G_NC_023719: gp258; EPM1_0583; phage(gi593777714)                       1.51e-170           StenotrophomonasmaltophiliaEPM1MSEDRQGRSTDTGKILYCSFCGKSQHEVRKLIAGPSVFICDECVELCNDIIREELEEKAQSARSSLPKPREILEVLDQYVIGQNRAKRTLAVAVYNHYKRIESRQKNDDVELAKSNILLVGPTGSGKTLLAETLARLLNVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQQGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFLQVDTKNILFICGGAFAGLDKVIQARSTDVGSIGFGAKVKSSERKQEVGKVLAEVEPEDLIKFGLIPEFVGRLPVVATLEELDEPALIKILTEPKNAITKQFKKLFEMENVELEFRPDALSAIARKALKRKTGARGLRTIVESVLLDTMYDLPSQENVSKVVVDESVIEHKSEPYLIYQTPAAPEQKAAGAE

#### region 2 ####
1003361..1004026                   PHAGE_Pseudo_EL_NC_007623: putative thymidylate kinase; EPM1_3656; phage(gi82701134)     8.54e-35            StenotrophomonasmaltophiliaEPM1MSPALLRHPRFVSLEGGEGAGKTTAINAIRDCLRSHGHEVVLTREPGGTPLAERIRGLVLKPDAEIAAEPLSAEAELLLVFAARAQHVRQVIQPALQRGAYVLSDRFTDSSYAYQGGGRGLDPQWIADLERRAVGLLPGLTLLLDVDVAVGRARANGRDLWPDRIESEQDDFFQRVREVFRSRAQQDPQRFALIDAGQEQARVAADVVARVERWLQDGEGA
1004023..1004979                   PHAGE_Strept_Dp_1_NC_015274: DnaX DNA polymerase III clamp loader complex gamma-tau-delta subunit; EPM1_3657; phage(gi327198331)     4.00e-10            StenotrophomonasmaltophiliaEPM1MSTFSPWQQRAFDQTVAALDAGRLGHGLLICGPAGLGKREVALALADHVLARGDAAHATRTRQLIAAGTHPDLQLVSFIPNKSGDKLRTEIVIEQVREITDKLALTPQYGVAQVVIVDPADAINRSAANALLKTLEEPQPGRYLWLISSDPARLPQTIRSRCQRLEFKLPPQHEALAWLQQQGHSEALAREALEAARGHPGQADNWLREDGLSLRREVGRDLEQLAAGKTGAVELAQKWCGDDNAALRLRFAADLALAQASTDALTTPERLHKLAAWFDAANRTRDLLRTTVRADLAVVELLLAWNKVNERPAARGNR
1004976..1005329                   Type IV pilus biogenesis protein PilZ; EPM1_3658                                     N/A                 StenotrophomonasmaltophiliaEPM1MSASNARQGILSLAVKDKAALYSAYMPFVKNGGIFVPTPKRYFLGDEVFLLLTLPDSSERLPVAGKVIWVTPAGAQGNRTAGIGVQLADGAEGEGVRHKIETLLAGLTGSDKPTHTM
1005441..1005512                   tRNA                                                                                 N/A                 GGGCGGTTAGCTCAGCGGTAGAGCATTGCCTTCACACGGCAAGGGTCACAGGTTCGATCCCTGTACCGCCCA
1005749..1006129                   Hypothetical protein; EPM1_3659                                                      N/A                 StenotrophomonasmaltophiliaEPM1MPLARIDLRKGKSADYLQRVGETIYQAMRAVGVPENDRFQIFQQHDAGTLIYDPGYLGVDRTDDFICIQITWNEGRTLEQKKALYAGIADGLHAAVGIRREDVFINLVEVKKENWSFGNGVAQYVS
complement(1006160..1007233)       PHAGE_Escher_vB_EcoM_ECOO78_NC_041926: replication and recombination DNA helicase; EPM1_3660; phage(gi100033)     3.80e-126           StenotrophomonasmaltophiliaEPM1MGLNITPAFRVVANSQDITDRIMARFKSLRITDETGNTSDTLELQLADHDPSDPIQLPPVGAELEAFIGYDGEVRRVGLYICDEVEISGFPGSMTLRARAAPFETSKGGKSDLQTQKTRTWKKGTTIGDMVRRMAGEHGLNAAVSASLASIVLPLTVQSQESDMNLLLRLAKQHDAIAKPGGGRLVFVKRGESTSASGERIPDVTLTPADGSDYRVTLAAREDAGTTIAYYRDVRSAKRQEVKVGSGEPIMRLRMAYADRESAEAAARAKHREQARQTRTLSYTLPGRETLMAEATVVMQGFREGVDGQWLVKRAEHSIGSEGYVTRIECEQPNSADAVKAASNAPASEGEQVCSEV
complement(1007224..1007439)       PHAGE_Entero_Arya_NC_031048: DNA primase subunit; EPM1_3661; phage(gi100025)         2.57e-21            StenotrophomonasmaltophiliaEPM1MARTYSTRDGDVVDRIAYAHYGEQSPAILRAVFDANPGLAARGPVLPAGVAITLPEVQRPASERKGVALWD
complement(1007423..1007890)       PHAGE_Entero_Arya_NC_031048: DCTP pyrophosphatase; EPM1_3662; phage(gi100024)        1.39e-31            StenotrophomonasmaltophiliaEPM1MKREFVTGTVDKLLSQFKANDSGNAPVLLMLGGFKFSLNTAVFREIQQSNEYRWQAQDRIGQMAALQYTGPGSASMTLPGVIYYQFRGAGNELSQLRKLAAQGTPHRLLTGKGGNLGLWVIEKIDATASEFTADSAILKQEFTLSLRKHSNGTNV
complement(1007893..1010340)       PHAGE_Escher_vB_EcoM_ECOO78_NC_041926: DNA polymerase; EPM1_3663; phage(gi100036)     2.12e-29            StenotrophomonasmaltophiliaEPM1MASNVQTTTITIGGEVSKSLKDALSFANDGVKRLGDEAGKLELKLAAMKKSGTAYTRMRAQADALRASQEALERVEAKRTANLEKREKLGASFKAARGTLGTAVTALAKPVENASGFARQNQQIGVAANLSRAQVSALGQAILQQSRATNQGADDLQRSIKLMVAAGMDAQSAQASLGAVGRTTTVTGASIDDVAQAAAALQQSFDIDPSRMQNALDVLVVNSQQGGLGLKDMGQVLPVLGSSFEAMKLQGTSAAATLGAALEATLDSAGGADKAASNMKSFMSEVLSPDIQEKAKKSLNLDLRKIIGDAQTSGGNPFDAAMQGIIQATAGDQKKIGTLFSDAQAKNFVQPMIENWDTYIRVRDKALNGSAGTTDAAYADAMQTDPQKIEGAKIAVDNLSKAFGAALLPAVGEAAVKLTELLNGVTSFVQENPKLIANTTQIVVGMLGMRAAVLGARYAWTFLQGPILGVQKAIQLFRGGSLLAQLGRFGPMAMRLASGFRIVATAIGAIGGGPIAVAVAAITAGALLVRKYWEPIKAFLGGVWEGLSGAGTAAMGELMRAVEPLRPAWEVMSGLIGQAWDWLSKMLEPAQYTGNELSRVAQIGSLVGEALLTNFRLVIQVIGGVVGAVVWLGEMLGTVAGFINETLGNIWESISQKATAAFDRILEKLKPVIEGVGWFMDKLGGGVGAANDKALEVAEGGLQTAVGAANIYSGMKARGGGGIGDMARVAYAVGTNDNDGLNRRMAELSGAQGRAAPAMPSPTTRAPTTVQQQQTNNITIHQQPGESSESVARRTADELQRRNAVAARGGLADRN
complement(1010461..1010751)       PHAGE_Entero_Arya_NC_031048: hypothetical protein; EPM1_3664; phage(gi100022)        6.70e-27            StenotrophomonasmaltophiliaEPM1MSSKTKTPTDTVIERDGFAEITLTRPRQVNGMETAVLRMREPTVEDMERYQDDKGSDAQREVRMIANLCEISPDDVRKMPLRDYARLQAGVALFTT
complement(1010832..1011335)       PHAGE_Entero_Arya_NC_031048: DNA helicase; EPM1_3665; phage(gi100021)                5.37e-55            StenotrophomonasmaltophiliaEPM1MARKIRKNFNFYVDGKGYAGSVMSFTAPKLSLKTEDFQAGGMLAPTEIVLGHEKLTADVEFASDDAEIMSKFHVIESKEYGFTAREALEGDDGEVTQVVHNMRGKVKLLDRGETKVGEKGTIKVSLALSYYKLTHGAQVVQEIDVVNMIARQGGVDVLAGIRGALGI
complement(1011338..1012540)       PHAGE_Escher_vB_EcoM_ECOO78_NC_041926: RegA; EPM1_3666; phage(gi100039)              6.66e-109           StenotrophomonasmaltophiliaEPM1MTEFLHGVQVVNIDTGARSIAIASSSVIGIVGTAPLADTEAFPVNTPVLVTSPSQAAKLSATTGTDAGTLPGALDTIFDQSSAVVVVVRVEKGANESATLANVLGGVNAQTGAYEGVHALLAAKSIVGVKPRILVAPGFTHVHPADPAKPEAVLANPVVAELLGIADKLRAVIIKDGPNSNDDAAKSTAALTGSKRVYVVDPALLVQSGDAIVTRHASGAVAGAIARSDNERGWWASPSNLELNGVVGTARAIDFGLSDATSRANLLNQANVATVIREGGFRLWGNRTTSIDPKWQFLCVVRTADIIADSLEAAHLWAVDRGISKTYVDDVREGVNAFLRGLKTQGAILGGNCWIDPELNAADSVAQGRFYWDFDFTPTYPGEQLTFRMHMNNNYVSEIF
complement(1012643..1013275)       PHAGE_Stenot_Smp131_NC_023588: hypothetical protein; EPM1_3667; phage(gi589892010)     8.10e-14            StenotrophomonasmaltophiliaEPM1MPSGYRSSGVDFDDLFDPYVEGPQAQDSGRRIGGAELSRRYAHIQYGSKRADVGHRINGMDVSNLWAARGTAQYDAVTIPNPSIGGSSYAGAAPNGHAAFSFKSNGMVQTWTNNPNGVTRTFGPWLIRGVASNFEIRYTKIEGDANPSGTGAWLNLGTDRYCGFDVVYGSAGCSLIVEIRRASTGVVLAREDQVYMSASHSRGDTGPIME
complement(1013277..1015478)       PHAGE_Stenot_Smp131_NC_023588: putative phage tail fiber protein; EPM1_3668; phage(gi589892009)     2.83e-82            StenotrophomonasmaltophiliaEPM1MRLKITDAGFAKLVNPPNTGTNAVLITQIGLTSTAFVPSAGLTALPGEIKRVATFGGQAVGDDTVHVTIRDDSATSYTLRGFGLYLADGTLFASYGQADPIMEKSAASMLLLATDTRFSGIDTTQIQFGDAGFLYPPATTEVVGVVELATSTEAEDATDTQRAVTPRGVRAYTDKRFGASAPTALAKTLLSAANTAAARTALELKSAALKDTGHGNGLDADTLDGKHASEFALAGDFATVGHMHVIADVTGLQSALDGKASRGGNTFTDQQFISGTYPLLGFGAAGAEQSFIGGWGNSSLWRVWSADRSASSEITIKHGDTPRWNGSPMWHAGNFAPEAKMDKSGGTFTGHVGVNGNSLRSYGWNGVANDGVLVLGDTNSYIFKNGSNFTFANAAGGYTAMLNAGGTVWTSGNFDPASKVSKAGDTMTGELKNLSHITAGPAASNKVRITVSGDGFPCIMGTNPAVDAYVPMNYYGTRHNFNSGIFASGPSLFRAAGDSQPGIRFHSQTLNGYPRTTIEAVTGDSSSFAEMHAISNGFHFYNPSLRRGIRMSNSGQVTTTPEFTNPATGITGFGFTSEGSFGGGFGMLDNSIQGGWWMAAGTMQWGISTYPNSMGAAMILGGNGALTTTGGYDFGSSRKLKNIDGELSYGLAVVEKMELAAGHYKPEYNDDGRRRLFFVAEQLAELVPEAVDLEGVEFQGERVASVKLDQLLPVMAKAIQELAAEVRALKAER
complement(1015486..1016265)       PROPHAGE_Xylell_Temecula1: phage-related tail protein; EPM1_3669; phage(gi28198988)     1.66e-59            StenotrophomonasmaltophiliaEPM1MNEPSTRLINARLRGAIDGRNRTFRHPGGALASLQAVYRTDARGRQPLQGSVIEGSRVTLAAAPVPGEVIDGDAQVVVPSAANLLPANAAHAERALARAIVARPLPVDITALWDADRCPTTLLPWLAWALSVDEWKAYWPEAVKRARVRTAIAIQRRKGTAGSVRDVVAAFGGSVLIREWWQLQPRGAPHTFEAVMTIANQDGQSATAMFVEDVIGEITRTKPVRSHFTFTQGMQADAAVGALAAAHATAFRRLQLIGE
complement(1016258..1017154)       PROPHAGE_Xylell_Temecula1: phage-related baseplate assembly protein; EPM1_3670; phage(gi28198989)     2.21e-108           StenotrophomonasmaltophiliaEPM1MASGSFTSVNLSQLPAPAVIEVLDFEAMFDESLTALQALDPTFDALLPSDPAFKILEVCTYLRLLDRQRVNDAARGVMLAYAGGSDLDHLAAIFGVARQVLDPGRPQEGIPPRYESDEDFRRRIQLGPEGFSVAGPEGAYVFHALSADPRVLDASATSPAPGEVVVSVLSREADGTATQGLLDIVEAKLSADDVRPLTDHVLVKPATIVTYSVDATLFTFAGPDSQVVLAEARTRLDRYISESHRLGRDVTRSGLFAALHAEGVQRVEIVHPAADVVVDRTQATHCAGVTLTHGGTDE
complement(1017157..1017495)       PHAGE_Entero_Arya_NC_031048: hypothetical protein; EPM1_3671; phage(gi100012)        2.25e-42            StenotrophomonasmaltophiliaEPM1MRGIDANTGKSLDGLAHLHQSVRDILTTPLGSRVLRREYGSRVFELIDAPTNRSLRMDLIAATVDALARWEPRLHVENVDVSLPAPGVMILAVTGIHLPDGEAITIEGIEVR
complement(1017548..1018138)       PHAGE_Escher_vB_EcoM_ECOO78_NC_041926: late promoter transcription; EPM1_3672; phage(gi100046)     2.07e-34            StenotrophomonasmaltophiliaEPM1MSAEHARLIGNLLMIGVVRELDEANGRVRVDADGMLTDWIPWLERRAGPGMRSWCAPEPGEQVVLACPYGDPGQALVLGSLYQGRFPPPADSRLRQRTEFADGSNVEYDQETTTLNVHVGSGKVIVTCANAQVIASESIVLDTPSIKATGDLDVSGAISAGKDISTPGEVKAGAIGLKAHTHTAQGPTAPTTPAQA
complement(1018135..1018689)       PHAGE_Escher_vB_EcoM_ECOO78_NC_041926: dsDNA binding protein; EPM1_3673; phage(gi100047)     3.26e-18            StenotrophomonasmaltophiliaEPM1MANDSFPPTLDPLIAAIEAAIRARFPGFASVEFHREANAEGMPLPACLLAMTRCDRSRDNNDGSGLLQATLRFEARIALPATDATTALQLRNAALALATWLHQLGRFPGVASGAIDVIAALPEDPAAAQPGLRTWIVEWSLPVALGDNPWDDAGGVVPQACYSFAPEIGRVHESRYQPLPERAP
complement(1019043..1019420)       Hypothetical protein; EPM1_3674                                                      N/A                 StenotrophomonasmaltophiliaEPM1MTLAGLRLGIGLLVLAGSHASCAWLGWTLRDRTADLAVATTRAAQQEARTDAVQRAHQQALANSAAGAQAESQRLAHQARRTEQFNTLQRDIETHAKTPGRDRGDADAEFMRIWREANAGHALPR
complement(1019417..1019902)       PHAGE_Salmon_64795_sal3_NC_031918: hypothetical protein; EPM1_3675; phage(gi100010)     1.52e-54            StenotrophomonasmaltophiliaEPM1MTVAAASALGGASVAAFLDMLAVSEGTDIPSQRSRDHGYDVIVGGQLFTDYRDHPRVLVSLPRYGIKSSAAGRYQFLRSTWDDLRARLGLPDFGPVSQDRAAVALLKQCGAYELIRLGRFDAAVTAARRIWASLPGAGYGQKEHALETLRAAYRAAGGALQ
complement(1019899..1020249)       PHAGE_Pseudo_phiPSA1_NC_024365: chemotaxis protein; EPM1_3676; phage(gi658307754)     7.91e-10            StenotrophomonasmaltophiliaEPM1MNESDLLAGVPDWAKYLGGTSGVLIAVSLWLRQWLSSAKVDRTADEATSNTLRTLQEQLAAERTRADGLMHEREAMAQEIGQLRGEVSALRAQIAQQSVQIDALLNLVRKQPGAAA
complement(1020246..1020695)       PHAGE_Escher_vB_EcoM_ECOO78_NC_041926: hypothetical protein; EPM1_3677; phage(gi100006)     1.75e-16            StenotrophomonasmaltophiliaEPM1MPLKTSSMNALPDSIQTLAEVIGESAALTLVRAWPPTTSSTTGRHRVIVYVPSTLPDQHRLIDILGHDVAQRLVAHFGGELLFLASCFAAGAHERREQIARAVASGMPRDHVAREFGVSQTTIKRALRGARTALPPAVHPALLKGYARA
complement(1021027..1021410)       Hypothetical protein; EPM1_3678                                                      N/A                 StenotrophomonasmaltophiliaEPM1MEVEQFTSTRLKAIELFKSQPKGSKDTVSLDAIFISLCTLATARAGAGSAQQARTVARPGNQQPPAPWFVETLAALKGKGESITVARFLMFANRFPVKRMDQVNAARWLRDAGYIPRKTGGNLVFDL
complement(1021563..1022201)       PHAGE_Verruc_P8625_NC_029047: putative deoxynucleotide monophosphate kinase; EPM1_3679; phage(gi981221138)     3.58e-24            StenotrophomonasmaltophiliaEPM1MIPASLDSGHRLIADTLAAFRAGPGLGSVALRPAPRSRVPLYIGIAGSKRSGKDTLANGLASALSLPCDSFAAPLRQLVATLLGLSLDELDSRKEDAIDWLAELTPRHLMQTAGTEWGRDRVHPELWVRSLFARLPEGGLVPDVRFANEARAIRRRGGVVIRVNRPGHRSSDPHASEQPLPHELVDIEVDNDSTPADLVRRSLDQLLSRGVI
complement(1022243..1022470)       Hypothetical protein; EPM1_3680                                                      N/A                 StenotrophomonasmaltophiliaEPM1MPRPRLHAFEGEQLTVQQIHQRVPVLSERTIRDHLAAGRRTRTAMLCFDPIAAAARGGRITQRILRARTVVGRDS
complement(1022545..1022820)       PHAGE_Escher_vB_EcoM_ECOO78_NC_041926: hypothetical protein; EPM1_3681; phage(gi100011)     3.32e-05            StenotrophomonasmaltophiliaEPM1MPRIHDGRDVDSSSDDWRLHCEARRLLQLDGYRRMGNDGRWTAVSPRRHRQQYLEGVLAARGAVERERLAAAALRLWTASPPGQPHHAESR
complement(1022821..1025157)       PHAGE_Escher_vB_EcoM_ECOO78_NC_041926: hypothetical protein; EPM1_3682; phage(gi100010)     2.02e-166           StenotrophomonasmaltophiliaEPM1MHTPHPTQDIVPAFLQAMHAHGIVPDARGRDALNADGTLVRFHVEGDRRGTRNGWAVLFGDHVPAGEFGSWRTGTRHAWCAKSPTALSAAEQRAIRQRQEAARSARERHQREREDAAAKAANVLWNRAIPADAHHPYLVRKGIHAHGLRVAPWPVRNSDGLVFRHIDNALLVPVMNSAGRIVSLQAIFPRVDPALGRDKDFLSGGRKQGCFHVIGKPVTGQPIAIAEGYATAGSIHQATGWCVVVAWDAGNLGAVARAWRGAMPDASFVLCADNDQWTRQPLDNPGVTLATQAAADIDARVVWPEFATLHGDDDRPTDFNDLHLREGLDTVRAQLLPPMPPAGGDDVALDDAPSSASARYQVPGNLSAFDAFTPFPDTNARGRPLPTARNLAELCRRTGVTVRYNVIRKDLEILVPGLQTTVDNAKEVAAGEVMDCMHRAGMATASFETNLCQVAEANPYNPVASWITSRPWDGQSRLQAFFDTVQEAKPTHMADGRVLKEVLMRRWLISGVAAAFEPDGVVARGVLTFVSKQNLGKTRWARQLAPVELQLIADGVVLDPANKDSVKQVISRWIVELGEVDATFRRTDIAALKSFISRSHDEIRRPYARTESRYARRTILFASVNDERFLRDATGNTRWWTVHAVALGEPARIDMQQVWAEAHALYCSGETWHLSAEELDALNATNSEHEPISPIAELIDRHFDWSLPAEHWSAHYRATEIVIAVGIDKPNRREVNEAAAYVVKRHGVRTRVVGKERAKVWLMPERRRTLAEHAAGPF
1025644..1025868                   PHAGE_Vibrio_vB_VchM_138_NC_019518: hypothetical protein; EPM1_3683; phage(gi422936557)     8.32e-05            StenotrophomonasmaltophiliaEPM1MTDTIDEAQEMEARHLQRALAQHATRASNVAPLTPMGECHNPDCSEDFDNDPARLFCGPACAERFEAIHQHRNA
1025880..1026134                   PHAGE_Pseudo_PaP2_NC_005884: hypothetical protein; EPM1_3684; phage(gi48697096)      4.69e-05            StenotrophomonasmaltophiliaEPM1MSLNSNDAGFTERIAGLSAELAVLVSLVENHIHLQLADLADSGDVDAQERFAVADPERWLENARNSLQAGVMFLERAVQQPARF

#### region 3 ####
complement(1610606..1611640)       PHAGE_Xylell_Xfas53_NC_013599: integrase; EPM1_4111; phage(gi273810420)              1.22e-135           StenotrophomonasmaltophiliaEPM1MTMGRKPNKPGAIPRFRPRKQKSGVVHYYYDLGGKPRKELPLGSNYALAIKKWAELEGTREAQAVAVITFRHVSEAYRKEVIIHKAPRTQLDNGHELAKLLEYFDDPPAPLDAIQPVTVRQYLTWRTKGGKGMVRANREKALLSHIWNFARDKGYTALPNPCAGIKGFKETGRDVYIEDDQYQAIRAAADVVVQDAMDLAYLIGQRPADVLSLTEMDVRDGVINIRQGKTKAKLRIAVEGELAVLLERLRARKAGHAVRNTLLIVSERGDAVSVDGMSRRWAKACAAAGIEGVQFRDLRAKAATDKAESSGDIRKAQQQLGHTTVSMTEHYTRKRRGHKSTPTR
complement(1611637..1611885)       PHAGE_Xylell_Xfas53_NC_013599: gp02; EPM1_4112; phage(gi273810421)                   3.23e-12            StenotrophomonasmaltophiliaEPM1MATKNKAAPGAGALCLSRETMRDLCDTPYKDRQLAFLVLNGIPHFKGLDGWPRVLWATLEGDSEVETDKATVVAGWKSNKAA
complement(1611897..1612022)       PHAGE_Escher_K1ind1_NC_041897: membrane-associated initiation of head vertex; EPM1_4113; phage(gi100034)     1.31e-05            StenotrophomonasmaltophiliaEPM1MGRLRAYGNAIVPQVAAEVIGAYMDCYPDPDEQLRAALATN
1612632..1612802                   Hypothetical protein; EPM1_4114                                                      N/A                 StenotrophomonasmaltophiliaEPM1MPIVILGFSFTRDGKRLARGAAGPQFPVVGPPSKSSCKGPAGDAGEEVALPVSGEV
complement(1612916..1613107)       Hypothetical protein; EPM1_4115                                                      N/A                 StenotrophomonasmaltophiliaEPM1MAEAIDHREVGRQLASMSGVDLSEARPATVRAWEARGLALQALARGDMAEAQRVMAHVRGGAR
complement(1613100..1613252)       Hypothetical protein; EPM1_4116                                                      N/A                 StenotrophomonasmaltophiliaEPM1MADQLLTAAMVHGFALAGFAAGIATLWAISRACRAARNGLRWCWRRCAHG
complement(1613245..1613652)       Hypothetical protein; EPM1_4117                                                      N/A                 StenotrophomonasmaltophiliaEPM1MDAAHEAVREALAARQPVGQDDQEYLESLDRALEGVIDQRDRYHEIADDLAGHIAAITGVDIGEHSSANCPWQNAIEAAEVYRPAQAVDLPNVIDQIAQQWDGCNYDAVGETIDVGQAIRAAGKRLINGKAVGNG
complement(1614078..1614296)       Hypothetical protein; EPM1_4118                                                      N/A                 StenotrophomonasmaltophiliaEPM1MTSIHVQPTFDLATQAEKDRQRAEIADDVAQFLRSGGKVQILGNSPIDRSTISRRQVVEGGHNSRTKKGASA
complement(1614293..1614523)       Hypothetical protein; EPM1_4119                                                      N/A                 StenotrophomonasmaltophiliaEPM1MKTCTKCAARLPLRFFPLINGKHTAACAPCRNTERRLHDPLRPLRRDPLQVELNHLTQSWQRRTRWPLLAHQETHP
complement(1614520..1614741)       PHAGE_Stenot_S1_NC_011589: hypothetical protein; EPM1_4120; phage(gi213163933)       7.02e-22            StenotrophomonasmaltophiliaEPM1MRGLNYKFNHIGAVRGGRAKAALFARVVDGKSYTMREIAEQLGVSKTTADKRVRRGPYPLTWANLGKPRLEQP
complement(1614738..1615517)       PHAGE_Paraco_Shpa_NC_041868: RegA; EPM1_4121; phage(gi100039)                        1.91e-17            StenotrophomonasmaltophiliaEPM1MRLIHCDQGSDAWHNARAGVITASMFATARSRVGELSDQQQLYVDSVLAGMASKAAAEHAGYKAVPRSAIIEKAIAGEPIGDFSEASKNYAFRLAIERISGEPLDEGFETFAMRRGHELEPQARAEHEVQSGLLVKRAGFVLSECGDYGCSADGFIGEDGGSEYKCFINPEKLRAFHIDNDASEVFEQAQGCMWLTDRQWWHIGLFCPALAAVGKQLWWRRFDRDEAFIAKLRADLEPFRQMVVGFEQSLRADDHQEAA
complement(1615514..1616443)       PHAGE_Entero_phi80_NC_021190: phage recombinase-annealing protein RecT; EPM1_4122; phage(gi824479614)     2.76e-80            StenotrophomonasmaltophiliaEPM1MNQIVTIEDSVYGTKDSFASVLSDRSINFDREAEFALQTLYGNDYAMKIAMQNRSSVIAAVVNIAAIGISLNPAKKQAYLVPRDGKICLDISYMGLMDLAIDSGSIRWGQAELVYENDTFGLNGIDQQPTHIRNPFAKDRGEVVGVYVVVKTADGDYLTDAMSVEEINAIRDRSSAWKAWLSKQKSCPWLTDWGEMAKKTVVKRAYKYWPKTERLDTAIHHLNTDGGEGLAVLSGQQVQQQSLPAPLSEDQEAERTALYASLQDIGMAGLDALGEAWSKLTPQQRKLIGGSGLESLKAEAERATAEVVG
complement(1616522..1616863)       PHAGE_Entero_ES18_NC_006949: gp42; EPM1_4123; phage(gi62362255)                      9.89e-08            StenotrophomonasmaltophiliaEPM1MCNYQGYEFGAGRYPDSYCVDGYLHDADSDYLNDELRCCPICDRAGAIQWWFDYWKDSCEEGDDRDFEVINEEHMRRATLLVDDIRFNRGISDPNATEIPVGRCPAGIPTPAT
complement(1616898..1617047)       Hypothetical protein; EPM1_4124                                                      N/A                 StenotrophomonasmaltophiliaEPM1MSPRLRIAWAAVALFAAVVVPLRIAEIHQAHTDRDAAKARWAATSSVRG
complement(1617044..1617331)       PHAGE_Pseudo_YMC11/02/R656_NC_028657: hypothetical protein; EPM1_4125; phage(gi966197807)     8.68e-05            StenotrophomonasmaltophiliaEPM1MDTAISNRSGYQCHHHLELDFTLYPEDGDQWEEAKANARLIAAAPELLDALIEAVECGMVPISSAKDGGASTHSRQVRCADMIRAAIAKATGGAQ
complement(1617393..1617644)       Hypothetical protein; EPM1_4126                                                      N/A                 StenotrophomonasmaltophiliaEPM1MFRYEKENPYDEMRKQLGLVMDLPPEPPRFRISSLFPKAEDTPSAADQFGLPPITPPMSLAEAREQRNREAVDGLCVEENDDE
complement(1617821..1618045)       Hypothetical protein; EPM1_4127                                                      N/A                 StenotrophomonasmaltophiliaEPM1MAGIDAAARSLWVEGQPVNPHAANLLSAKALAVEVLAAAHASLAARDLADQMAADDRLRAALAACEPETPHEPV
complement(1618063..1618179)       Hypothetical protein; EPM1_4128                                                      N/A                 StenotrophomonasmaltophiliaEPM1MTAADRALHFQALRLASGYLLAFCMGVAFAVVVQAVLS
complement(1618176..1618481)       Hypothetical protein; EPM1_4129                                                      N/A                 StenotrophomonasmaltophiliaEPM1MGLHTATDIARNAQRSFDGLLPADTEEAFQDACNSLARTYDREGSTAELISALVTSERALDYLVSEVEVPAHLLHDLRELLDRQARIVRQVEREMRAGGAA
complement(1619277..1619885)       PHAGE_Pseudo_JBD44_NC_030929: hypothetical protein; EPM1_4130; phage(gi100077)       3.06e-16            StenotrophomonasmaltophiliaEPM1MLSKAGIYFILDGTTKAEKIRAATVAKLSAALQVNAEWLQYGRGPMEGNVQTPATEGEWEDVRGYAQAMGLGGGPEAAEYAETHKLKFKASSLARKRLRAPALAVMYGKGDSMEPRVLSGDAILFDTSDTRPRDGALFVILVPGAHNPEYQVKRCELLDDLVYFKADNPHGDHNWKKARRMDDKKNPIQIIGRVRWIGSWED

#### region 4 ####
2348612..2348626                   attL                                                                                 N/A                 TGCGCCCCAAGCGAA
complement(2353529..2354749)       PHAGE_Stenot_phiSHP2_NC_015586: Zot protein; EPM1_1479; phage(gi363542408)           0.0                 StenotrophomonasmaltophiliaEPM1MMYLISGQPGNGKTLRAMSMAQEFYEQNRQAVKEGKAQPRRFFTNVAGATTEENPDAFPWFERLPDHNDWTQLPDGSFVLYDEAHSDGNTQGLERYGRLFPSTGKPGESEDPRIRSMSTHRHRGFDLVFVTQWPSKIHHQVRSLIGSHTHMNRAFGMQRAGVLTWTRVQADPYDERIRDKAEEEIWVYPKNLYDRYRSATLHTASHKFKVPKRVWQGLSVAVALIGILWLGWLFLIKPSNAQAAKKEEQGAEALPAAGALAPLGAGMPAARPLTREEYVQKHKPRVEFQPWSAPAFDDRTVQSQPELYCMASGTTEQDTTCTCVTEQGTKAKISLPVCVAIARDGPAYNPYRAPRQESESSQDHPARGIAQSSPSGTPEPSPHALVEVGKRPMGTFPETPPYPATF
complement(2356109..2356246)       PHAGE_Stenot_phiSHP2_NC_015586: hypothetical protein; EPM1_1480; phage(gi363542405)     1.70e-13            StenotrophomonasmaltophiliaEPM1MELDYSAALTVLAGLAAGVAAIGTAKLAPAAIAVGYKWFKAAIFG
complement(2356270..2356461)       PHAGE_Stenot_phiSHP2_NC_015586: hypothetical protein; EPM1_1481; phage(gi363542404)     8.95e-39            StenotrophomonasmaltophiliaEPM1MARYVYECLQFNEQTGTCEQAGFVPRTDIPALTTAEVSGLLSMVAVCFAVAWAYKQLGRSIRN
complement(2356465..2356764)       PHAGE_Stenot_phiSHP2_NC_015586: single-stranded DNA binding protein; EPM1_1482; phage(gi363542403)     7.50e-54            StenotrophomonasmaltophiliaEPM1MIKVTVLDSQINERGGSFTNDRNENVEFTTRKQRGKLEADGFAYPFDVRLDKGQPGYQAGEYELDVPAMLQVNKGVATLSKFTVLRPLQKAAPRPAAQA
complement(2356769..2357875)       PHAGE_Stenot_phiSHP2_NC_015586: phage replication protein; EPM1_1483; phage(gi363542402)     0.0                 StenotrophomonasmaltophiliaEPM1MAGDRAVLAESGLPSSNRGVSEFRNPEGTLTVGIDWFSASVDMLAVLNELDFREGESYEQIRQWVDFSPENARVVALQIFCWFFAGLGLELDEVAGGGRFYLWRIKILNAEKKFVGMIELGGENCRRADGTYTARIELTGDGCRAVAAARCGHAQRWLELRAKLESCGGRITRVDVCADDLVGNYPLRLAQKWYAQGEFDNRGQRPKAQLVDDYDSGDGKTLYVGGKKSEKQLRVYEKGREQGDKASPWVRYEAQFRASNRKELPLDILRDPASYLLGAYPVLSFLRCVATRIEITKAAVEATWKSVRRHIRRQYGAALNFISKNCPDDQSLRAVIESCTSPSLPKWVTGDTAAHWPEIAAVQPTSKG
complement(2357865..2357978)       Hypothetical protein; EPM1_1484                                                      N/A                 StenotrophomonasmaltophiliaEPM1MLVALVLGVAVVSIAIEQAWLALRRLWNLWKDRPNGR
complement(2358038..2358265)       PHAGE_Stenot_phiSMA6_NC_043029: hypothetical protein; EPM1_1485; phage(gi100010)     1.11e-13            StenotrophomonasmaltophiliaEPM1MTEPLLALALLGAIAAVSIGGARIVSWLLDRRDHTASRQSREAQVIALSKAEIAATKRGDLLAAARYAEEQERAA
complement(2359655..2362648)       PROPHAGE_Xantho_33913: Tn5041 transposase; EPM1_1486; phage(gi21231545)              0.0                 StenotrophomonasmaltophiliaEPM1MATLHETAYPRLKPDPTAKELEEIYTPTAAEIAFAKQLTTQPGPQLAVLIHLKLFQRLGYFTLLADVPERIRKHIAKAARLGRVLDTDQLERYDASGSQRRHMPQLRQFIGVRPLDKSGLAWLDTVATGAAQTKHTIPDIVNVLLEELVHHRYELPGFRTLELAAIGARERVNLGYYRSISHALTPATRTLIDELLRAPEGSRFTGWQSLKREPGRPTNKEVRFYLQHIRMLQQLADQLPPIDVPVPKLKQFRAMARAYDASELAELAPDKRYALATIFIRAQHAKTLDDAAELFIKQVRGLENTAQQKLLAYQLEHAKRADFLIGQLKEILQAYQLDGSDSQRVDAIDNSLEAEVSTLLAECEEHMAYAGKNYLPFMLQPYGAVRPLLFNGLELMKLRATSHDAGMEPLIAAVLSLRNQRRELIEVASLGLDPEKDFDWMSKLWCQHVFGKRASAAGAGWMHRKYFELAVLVQVKDELKSGDLFIPSSERFDDYREQLVDEATLAQELEAYGQVSGLPTDAESFVAGLRAQLTSLADEVDARFPENVHADILDGRLVLRKGQRAEVSSAITTVDRLIAERLPESSIVDVLIDASQWLDLHRFFRPIAGTESQVEDLPRRVITTLFCYGCNLGPTQTARSIKGFSRRQVAWLNLKYVTEDVLEKAIVEVINTYNKFDLPGYWGSGKSASADGTKWSVYEDNLLSEYHIRYGGYGGIGYYHVSDKYVALFSHFIPCGVHEGIYILDGLLANTSDIQPEIVHGDTQAQSYPVFGLAHMLGIQLMPRIRNIKDLTFFRPEPGRAYKNIQALFGDSIDWQLIATHLHDMLRVVISIRLGKITASSILRRLGTYSRKNKLYFAFRELGKAVRTLFLLRYIDDNEIRKTIHAATNKSEEYNGFVKWVFFGSQGIIAENVQHEQRKIIKYSQLVANMIILHNVEGMSRTLAEMRKEGIELTPEILAGLSPYRTSHINRFGDYHLDLEREVAPLSYTAKVLEQTP
complement(2362673..2363944)       Site-specific recombinase, phage integrase family; EPM1_1487                         N/A                 StenotrophomonasmaltophiliaEPM1MTELDRYLDAATRQNTVRSYASALRHFEVEWQGHLPATPDSVARYLAAYAQTLATSTLRQRLAAIASWHRDHGFVDPTRSPLVRKVLKGIQTLHPGQVKQAAPLQIRRLVELDDWLAAAIAAAHARGDGPAALRHQRDRALVLLGFWRGFRGDELLRLDVAHLTLVPGQGMTCFLPRSKGDRQAAGVTYKVPALSRLCPVEATQAWLQAADLQEGPVFRAVNQWGQVSAEGLHPNSLVRLLRELLTSAGFADAGLHSSHSLRRGFASWANDQGWDMKALMEYVGWRDVQSAMRYLDGRDPFARDRIEASLPSPTVPVPAMALPAPEGKSALQLRLRMVLTPFARTGRGAAKARGRIEEICLAPFQAVRLNTASSEYQLTAPTDPERDLDEILATLLDDMHRMADTHQCFLEASLSTDDGRHWD
2373279..2373293                   attR                                                                                 N/A                 TGCGCCCCAAGCGAA

#### region 5 ####
2431276..2431287                   attL                                                                                 N/A                 AGGCGGGCTTGT
2444576..2445865                   Site-specific recombinase, phage integrase family; EPM1_1556                         N/A                 StenotrophomonasmaltophiliaEPM1MRVLGQVTILDQYIDAATRENTVRSYASALRHFEVEWQGHLPATPDSVARYLATYAQTLATSTLRHRLAAIAFWHRDHGFVDPTRSPLVRKVLKGIQTLHPTRVKQAAPLQIRRLVELDDWLAAAIAAAHARGDGAAALRHQRDRALVLLGFWRGFRGDELLRLEVAHLTLVPGQGMTCFLPRSKGDRQAAGVTHKVPALSRLCPVEATQVWLQAANVQDGPVFRAINQWGHVSAEGLHPNSLVRLLRELLASAGFADAGLHSSHSLRRGFASWANDQGWDMKALMEYVGWRDVQSAMRYLDGRDPFARDRIEASLPSPTAPAPAMALPAPEVKSALQLLLRMVLTPFARAGRGAAKARGRIEEICLAPFQAVRLNTASSEYRLTVPTDPDRDLDEILATLLDDMHRMADTHQCFLEASLSTDDGRHWD
2445890..2448883                   PROPHAGE_Xantho_33913: Tn5041 transposase; EPM1_1557; phage(gi21231545)              0.0                 StenotrophomonasmaltophiliaEPM1MATLHETAYPRLKPDPTAKELEEIYTPSAAEIAFAKQLTTQPGPQLAVLIHLKLFQRLGYFTLLAEVPERIRQHIAKAARLGRVLASDQLDRYDSSGSKRRHMPQLRQFIGVRPLDKSGLSWLDTVATAAAQTKHTIPDIVNVLLEELVHHRYELPGFRTLEMAAIGARERVNLGYYRSISHALTPATRTLIDELLRAPEGSKFTGWHSLKREPGRPTNKEVRFYLQHIRMLQQLAEQLPPIDVPVPKLKQFRAMARAYDASELAELGEDKRYALATIFIRAQHAKTLDDAAELFIKQVRGLENTAQQKLLAYQLEHAKRADFLIGQLKEILQAYQLDGSDSQRVDAIDNSLEAEVSTLLAECEEHMAYAGKNYLPFMLQPYGAVRPLLFNGLELMNLRATSHDAGMEPLIAAVLSLRNQRRELIEVAFLGLDPEKDFDWMSKLWRQHVFGKRASAAGAGWMHRKYFELAVLVQVKDELKSGDLFIPSSERFDDYREQLVDEATLAQELEAYGQVSGLPTDAESFVAGLRAQLTALADEVDARFPENVHADILDGRLVLRKGQRAEVSSAITTVDRLIAERLPESSIVDVLIDASQWLDLHRFFRPIAGTESQVEDLPRRVITTLFCYGCNLGPTQTARSIKGFSRRQVAWLNLKYVTEDVLEKAIVEVINTYNKFDLPGYWGSGKSASADGTKWSVYEDNLLSEYHIRYGGYGGIGYYHVSDKYVALFSHFIPCGVHEGIYILDGLLANTSDIQPEIVHGDTQAQSYPVFGLAHMLGIQLMPRIRNIKDLTFFRPEPGRAYKNIQALFGDSIDWQLIATHLHDMLRVVISIRLGKITASSILRRLGTYSRKNKLYFAFRELGKAVRTLFLLRYIDDNEIRKTINAATNKSEEYNGFVKWVFFGSQGIIAENVQHEQRKIIKYSQLVANMIILHNVEGMSRTLAEMRKEGIELTPEILAGLSPYRTSHINRFGDYHLDLEREVAPLSYTAKVLEQTP
complement(2449977..2451194)       PHAGE_Stenot_phiSHP2_NC_015586: Zot protein; EPM1_1558; phage(gi363542408)           0.0                 StenotrophomonasmaltophiliaEPM1MYLISGQPGNGKTLRAMSMAQEFYEQNQQAVKEGKAQPRRFFTNVAGATTEENPDAFPWFEKLPDHNDWTQLPDGSFVLYDEAHSDGNTQGLERYGRLFPSTGKPGESEDPRIRSMSTHRHRGFDLVFVTQWPSKIHHQVRSLIGSHTHMNRAFGMQRAGVLTWTRVQADPYDERIRDKAEEEIWVYPKNLYDRYRSATLHTASHKFKVPKRVWQGLSVAVALIGILWLGWLFLIKPSNAQAAKKEEQGAGALPAAGALAPLGAGMPAARPLTREEYVQKHKPRVEFQPWSAPAFDDRTVQSQPELYCMASGTTEQDTTCTCVTEQGTKAKISLPVCVAIARDGPAYNPYRAPRQESESSQDHPARGIAQSSPSGTPEPSPHALVEVGKRPMGTFPETPPYPATF
complement(2451194..2451421)       PHAGE_Stenot_phiSHP2_NC_015586: hypothetical protein; EPM1_1559; phage(gi363542407)     2.19e-33            StenotrophomonasmaltophiliaEPM1MTGAGLGLATGAALLPLVKSALNLVVSYWGGISGDLANVLLLAGAGEAITIVGSAMVTKVVIDAGKVAVQKAASK
complement(2452509..2452646)       PHAGE_Stenot_phiSHP2_NC_015586: hypothetical protein; EPM1_1560; phage(gi363542405)     6.05e-13            StenotrophomonasmaltophiliaEPM1MDLDYSAALTVLAGLAAGVAAIGTAKLAPAAIAVGYKWFKAAIFG
complement(2452944..2453171)       PHAGE_Stenot_phiSHP2_NC_015586: single-stranded DNA binding protein; EPM1_1561; phage(gi363542403)     2.29e-26            StenotrophomonasmaltophiliaEPM1MIKVTVLDSQINERGGSFTNDRNENVEFTTRKQRGKLEADGFAYPFDVRLDKGQPGYQGGGGRIRAGCSSHAAGQ
complement(2453176..2454282)       PHAGE_Stenot_phiSHP2_NC_015586: phage replication protein; EPM1_1562; phage(gi363542402)     0.0                 StenotrophomonasmaltophiliaEPM1MAGDRAVLAGSGLPSSNRGVSEFRNPEGTLTVGIDWFSASVDMLAVLNELAFREGDSYEEIRQWVDFSPDNARVVALQIFCWFFAGLGLELDEVAGGGRFYLWRIKILSAEKKFVGMIELGGENCRRADGTYTARIELTGDGCRAVAAARCGHAQRWLELRAKLESCGGRITRVDVCADDLVGNYPLRLAQKWYAQGEFDNRGQRPKAQLVDDYDSGDGKTLYVGGKKSEKQLRVYEKGREQGDKASPWVRYEAQFRASNRKELPLDILRDPASYLLGAYPVLSFLRCVATRIEITKAAVEATWKSVRRHIRRQYGAALNFISKNCPDDQSLRAVIESCTSPSLPKWVTGDTPAHWPEIAAVQPTSKG
2457994..2458005                   attR                                                                                 N/A                 AGGCGGGCTTGT
