gi|00000000|ref|CP000116.1|  Thiobacillus denitrificans ATCC 25259, complete genome. 2909809, gc%: 66.07%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
1020248..1020532                   PHAGE_Burkho_KS10_NC_011216: DNA binding protein HU-beta; Tbd_0957; phage(gi198449285)     4.80e-15            ThiobacillusdenitrificansATCC25259MTKSELIAQLAGRHSQFSIADIEMAVKTILDALAKNLSRGERIEIRGFGSFSLSFRPARLGRNPKSGERVQVPAKYVPHFKAGKELRDRVDFPL
1020686..1020976                   conserved hypothetical protein; Tbd_0958                                             N/A                 ThiobacillusdenitrificansATCC25259MKNLTRYLGLAAKVALFLLVLGFALKNSHTATFYSYLGYVWQVPLIVLLGLAFLLGALTGVVALLPTLFRLRRELARKPRLPEPDTTTIPTDLPGV
1020983..1022167                   putative N-acetylglucosaminyl transferase; Tbd_0959                                  N/A                 ThiobacillusdenitrificansATCC25259MEFEFWWLLAFPLFFALGWIAARVDIRQVVTESRALPNSYFRGLNFLLNEQPDKAIEAFLEVVKLEPETIDLHFALGGLFRRRGEFDRAIRMHEHLLEREYPQGHKGLAEEQRLRAMSELGQDYLKAGLLDRAEQVFGKLLETSQHGQARTHLLEIYVQEKDWQKAIDAARLLERDTSKPLNADIAHFYCELALLESAKGNSDAAAAQLQQALAANRQSVRANLMTGDLHAAAGRHEAAIAAWRLVETQSAGHMALVVDRVLGSYRQLGRVGEGVQWLRAFYARQPSHDVFNALYLAVSETEGAAAARQLAREELRRNPSLRTLDRLLEAEIVTADPEQRELLQVEKSLVASYSQRMMRYQCGSCGFKAKQFFWRCPACGRWDSFDPERGEGES
1022197..1022934                   orotidine 5'-phosphate decarboxylase; Tbd_0960                                       N/A                 ThiobacillusdenitrificansATCC25259MTHKIIVALDFPAGAPALALADRLDPARCRLKVGKELFTAAGPDLVRALVARGFEVFLDLKFHDIPNTVAAACRAAAGLGVWMLNVHAAGGRRMMDAAREALESLPPGDGAADTPQRPLLIAVTVLTSMSAGDLAETGVADTPAEQVMRLARLAHACALDGVVCSAQEAAGLRAALGADFRLVTPGIRPAGAAAADQRRVMTPVEALRAGATDLVIGRPITGAGDPLAALAAIQADIEENLGRAF
1022931..1024253                   PHAGE_Bacill_SP_15_NC_031245: hypothetical protein; Tbd_0961; phage(gi100146)        2.82e-99            ThiobacillusdenitrificansATCC25259MKITVIGTGYVGLVTGTCLAEVGNDVLCLDLDPKKIETLKAGGIPIYEPGLEDMVQRNVAAGRLHFTTDIEESVAFGQIQFIAVGTPPDEDGSADLQYVVAAARNIGRHMDDYKLVVDKSTVPVGTADKVRAALAEELARRGAAIEFNVASNPEFLKEGAAVEDFMKPDRIVIGTDSERATQLLRQLYAPFQRNHERLRVMDVRSAELTKYAANAMLATRISFMNELAVLAEKLGADIEQVRHGIGSDPRIGYDFLYAGCGYGGSCFPKDVQALRRTGQENGVPLRVLDAVEEANDAQKQILVNKLVARFGNDLEGRRFAMWGLAFKPNTDDMREAPSRTMLDALWAMGASVSAYDPAAMDETRRIYGERADLQLVDSPMDALKGADALLIVTEWKVFRSPNFDTLKSLLKAPLIFDGRNLYEPRAMREMGFDYFPIGRP
1024259..1025203                   PHAGE_Synech_S_CAM3_NC_031906: baseplate hub subunit; Tbd_0962; phage(gi100107)      6.39e-18            ThiobacillusdenitrificansATCC25259MRDAIARTRILVAGDVMLDRYWFGEVSRISPEAPVPVVHVTRNEDRIGGAGNVARNAAALGAQVTLLSVAGRDEAGLALRRLLDAEPFAVQLHEDPAYSTITKLRVIGRQQQLLRVDFETQPGHEVLAAKLEAFARLLAECDVVILSDYGKGGLTHVGRMIELARDAKKPILVDPKGDDWARYAGATLITPNRSEFREIAGGWKSERELADKAAEVRRKFRFDALLVTRSEEGMSLFDAEGAHHEATRAQEVFDVSGAGDTVIAALAVALGAGASSVEAMRLANRAAGIVVGKFGTAVATADEVFANSSTGGQP
1025200..1026198                   PHAGE_Prochl_P_SSM2_NC_006883: putative nucleotide-sugar epimerase; Tbd_0963; phage(gi61806184)     1.29e-35            ThiobacillusdenitrificansATCC25259MSQYTVVTGAAGFIGANIVKALNERGETNIIAVDNLTKADKFKNLTDCEIADYLDKTEFLSVVEEGVLDGSVAAIFHEGACSDTMETDGRYMMDNNYRYSGALLKFCQDEGAQFLYASSASVYGSGRVFSESRECESPLNVYGYSKFLFDQSVRRLWAERTAQIAGFRYFNVYGPREQHKGRMASVAFHFFNQYRAEGRVKLFEGCDGYPNGEQRRDFVSVEDVVRVNMWFLDHPEVSGIFNVGTGRCQSFNDVAVATVNACRAAEGQDALTLDEMQAQGLIGYVAFPEALKGKYQSYTEADTAALRRAGYDGSFYSVEEGTARYIERLLQS
1026195..1027088                   PHAGE_Lactoc_P087_NC_012663: putative cysteine synthase; Tbd_0964; phage(gi229605000)     1.66e-62            ThiobacillusdenitrificansATCC25259MSTYKTIEDTVGNTPLVRLKRLPGETSNIVLVKLEGNNPAGSVKDRPALSMIEQAEARGEIRPGDTLIEATSGNTGIALAMAAAMRGYKMVLIMPEHLSIERRQTMRAFGAELRLVSREAGMEGARDLAIELEKQGVGRVLDQFTNPDNPAAHYRSTGPEIWRDTEGRISHFVSSMGTTGTIMGCSRYLKEQNPAIQIVGVQPTEGAQIPGIRKWPAEYVPKICDPSRVDRMIYVGQQDAEETTRRLAREEGIFAGISSGGALWAALQLSKEVENATIVSIVCDRGDRYLSTGVFPA
1027097..1028449                   PHAGE_Lactob_LfeInf_NC_029058: DNA helicase; Tbd_0965; phage(gi985757361)            3.02e-05            ThiobacillusdenitrificansATCC25259MAKAKTVYTCTECGGSSPKWQGQCPACNAWNTLVETIAETAKPRFAALAATSQVQLLHEVEASEESRIATGIGELDRVLGGGLVPGGVTLIGGDPGIGKSTLLLQALAGLAERMGTLYVSGEESARQVALRARRLALPETRLPVLPEIRLEAILAQLAATSPEVAVVDSIQTVYSEALTSAPGSVAQVRECAAQLTRHAKQSGTAVILVGHVTKEGAIAGPRVLEHIVDTVLYFEGDTGSSYRLVRAFKNRFGAVNEIGVFAMTEKGLKGVSNPSAIFLSRHGEPVPGSCVLVTQEGTRPLLVEIQALVDTSHAPNPRRLSVGLEQNRLAMLLAVLHRHAGIACFDQDVFVNAVGGVKISEPAADLAVLAAIVSSLRSQPLPDKLVMFGEVGLAGEIRPVQRGQERLKEAAKLGFTQAIVPAANQPKQKIAGMTVHAVQRLDDAISLFRG

#### region 2 ####
complement(1868142..1869602)       PHAGE_Cyanop_S_RIM50_NC_031242: baseplate wedge subunit and tail pin; Tbd_1770; phage(gi100204)     1.27e-08            ThiobacillusdenitrificansATCC25259MSHLLPVSRVARLVGQSRHAMQEMIRKGSLATFDGMVELDEVLRAFPGVKWDDDAELRRVAEIKDKAFGKRVLERVLPDKSVLAARLAELGDDYAAAKALLLHYANVLVWVDQKIDDIDEGASAETHHALHAVRAFLLRNLAEVPPDATIAQAAIARERILRIMSAHVTIQPSGHEFLVEGNDTLLDGALRNGISLSYGCSNGNCGECKARVISGEVKKVHAHDYVLKQGEKDAGVVLMCAYAPVNDVVIEAGVAGARDIPIQQLTAKVKAVEVFNPEIAALHVLAPRSQRLRYLGGQTIRLTVGAASGRYAIASCPCEDRHIEVHVPRHSGDAFADVVFDELKPNVPVEIEGPFGEFVLDEESRRPTIFLAFGAGFAPIKSLIQHAMSLELVESMDLHWLADGAGHYQDNLCRAWTDAIDNFTYVPHAPSNDVAAVVTDIARGYPGLQRFDVYAAGNGEELDAARTCFLDQGLPAERWFAGSTDI
1869715..1871412                   PHAGE_Lactoc_CB13_NC_013155: putative single-stranded DNA specific exonuclease; Tbd_1771; phage(gi256588053)     3.44e-31            ThiobacillusdenitrificansATCC25259MPSITTRPCPTEVCAALEQAGLAPAWARLYAARGVSHPDQIAHRLPQLLPPTAMLNSDRAARLLADAIEAHKKLLIVGDYDADGATACALGVRGLRMLGARVDYLVPNRLEHGYGLTPDIVRIAAARQPDLLITVDNGIAAVEGVAAANALGIPVLVTDHHLPGDALPDAACIVNPNQPHCAFPSKNLAGVGVMFYVLLALRAELRRRGAYEQVAEPDLRVLLDLVALGTVADVVRLDANNRTLVAQGLARMRAGLACPGIAALFQAAGREPARATVFDLGFMLGPRLNAAGRIDDMALGIECLLADSPSAAQQLAQRLDALNRARRDVEADMLDEALAILARFSPSDSYSLTAYQPDWHIGVIGILASRLKDKFHRPTVVLAASESGELKGSGRSIPGLHLRDALDLVDKRHPGLILKFGGHAMAAGLSIAAGRQEEFAHAFEAVVRGLIDPADLEGVIETDGELELAEHRYELALELEHAVWGQGFPAPLFTGVFDVAAQRVVGDKHLKLTLARDGNAFEAMRFFQSDPLPERIHAVYALMPNEFNGRRTLQLKLQHWEPAAP
1871428..1872144                   PHAGE_Stenot_vB_SmaS_DLP_5_NC_042082: hypothetical protein; Tbd_1772; phage(gi100099)     3.92e-09            ThiobacillusdenitrificansATCC25259MPTIEPGSPRDAASTASRHPAPPFADASARPEHKLTPHFPRMPSITSLLILLNISVYALALLTGPDIIRVFALWPPGSGGGFYLWQLVTYSFLHGSLLHLGFNMLAIWMFGAALEKRWNDLRYLLTYLLSVIVAAMTQIAVSGYFLHATGPVIGASGGVFGLLLAYALYFPNRVISVVFLPFIQIPARRFVLGYGLVELFLGVTNTGQGVAHFAHLGGLFGGWLGVQYFRGRGVFGQR
complement(1872187..1873539)       PHAGE_Lactoc_P087_NC_012663: putative cysteine synthase; Tbd_1773; phage(gi229605000)     6.72e-05            ThiobacillusdenitrificansATCC25259MPQTKFLLDESEIPSHWYNVVADMPKPPAPPLGPDGKPVGPDALSAIFPQSLIEQEMSAERWIAIPEKVREIYRLWRPSPLFRAHRLEAALGTPAKIYYKYEGVSPAGSHKVNTSVAQAYYNAEAGIKRIATETGAGQWGCSMALAGQMFGLEVRVYMVKVSYNQKPYRRSMMQTWGAEVFASPSTETASGRAALAESADNPGSLGLAISEAVEDAASRADTSYALGSVLNHVLLHQTVIGLEAKKQFEKAGDYPDMIFAPCGGGSNFGGVAFPFLADKAAGKNVRLVAVEPASCPTLTRGHYAYDFGDTAKLTPMMLMYTLGHDFMPPGIHAGGLRYHGDSALVSQLYHEKLLEAVAVQQLATFEAGVRFARAEGIVPAPESNHAIAACIDEALRCKESGEAKTLFFNLSGHGHFDMAAYDSYFAGKLEDFAYPEAAIQAALERLPKVA
complement(1873642..1874652)       PHAGE_Stenot_vB_SmaS_DLP_5_NC_042082: hypothetical protein; Tbd_1774; phage(gi100085)     2.96e-36            ThiobacillusdenitrificansATCC25259MRVLLTGGAGYIGSHTAVECLAAGHDVVVFDNLSNSSEKSLERVARIAGKPVSFVRGDIRDRHALRKLFAEHAVDAVVHFAGLKAVGESVEHPLRYYDNNIGGSIALFETMAEVGLKTIVFSSSATVYGDPVRVPITEDFPLSATNPYGRSKLFIEEMLRDIARSDGGWHIALLRYFNPVGAHASGLIGEDPRGIPNNLMPYIAQVAVGRRPHLNVFGGDYPTPDGTGVRDYIHVVDLARGHVAALGRLQKTAGVQTWNLGTGRGVSVLDMVRAFEAASGRAIPYRIVERRAGDVAQCWADPSCAARDLGWRAEYDLPRMCEDAWRWQQGNPEGYA
complement(1874762..1875745)       PHAGE_Synech_S_CAM7_NC_031927: minor capsid protein inhibitor of protease; Tbd_1775; phage(gi100226)     1.36e-99            ThiobacillusdenitrificansATCC25259MDKNARIYVAGHRGLVGSALMRDLERKGYGNFVTRTHAELDLTKQAAVEAFFASERPDYVFLAAAKVGGIHANDTYPADFIRDNLAIQTNVIHAAWKSDVKRLLFLGSSCIYPKFAPQPMKEAHLLDGELEPTNRPYALAKIAGIEMCWAYNRQYKTQYLAVMPTNLYGPGDNYHPENSHVIPALIRRFHEAKQAGAPSVSVWGSGTPRREFLYSEDMADACTHLMALPDAEFLPLLGQDRNDGLAPLVNIGVGHDLTIRELAETVKSVVGYPGDIVFDASKPDGTPRKLLDVSRLNAMGWQARTEMGTGLRRAYEDFLSAKSSEST
complement(1875749..1876834)       PHAGE_Synech_S_SKS1_NC_020851: GDP-D-mannose 4,6-dehydratase; Tbd_1776; phage(gi472340900)     4.56e-174           ThiobacillusdenitrificansATCC25259MIKKALITGVTGQDGAYLAEFLLGKGYEVHGIKRRTSLFNTDRIDHLYQDPHEKDRRFILHHGDLTDSSSLIRIIQQVRPDEIYNLAAQSHVAVSFEEPEYTANSDALGALRILEAIRILGLEKKTRFYQASTSELYGLVQETPQKETTPFYPRSPYAVAKLYAYWITVNYREAYGMYACNGILFNHESPIRGETFVTRKITRALARIKLGLQDCLFLGNMDAKRDWGHAKDYVEMQWLMLQQEKPEDFVIATGVQYSVRDFVDAAAKELGMSIRWEGEGVAEKGYDDKGRCVVAVDPRYFRPTEVETLLGDPAKAKDKLGWTPKISFDELVTEMVREDLKAAERDELVKKHGYKAMDYHE
complement(1876923..1877816)       PHAGE_Escher_phAPEC8_NC_020079: putative dTDP-4-dehydrorhamnose reductase; Tbd_1777; phage(gi448260370)     1.29e-33            ThiobacillusdenitrificansATCC25259MRPRILLTGPNGQVGWELQRTLGSLGEVVALDSSALNLADPRQVRETVRALAPRIIVNPAAYTAVDKAESEPELARAVNVVAPALLAEEAHRLDALLVHYSTDYVFNGSGSRPWREDDPCDPLNVYGATKLEGERAIQESGCRHLIFRTSWVYGARGSNFLLTMTRLMRERPELKIVADQMGAPTWCRDLAEATAQILSQLCAPQTRLTDPAPWGVYHAANGGETSWHGFAEAIQRLEGEGPAAHARLLPIPSSDYPTPARRPLNSRLDSDKLARVFGLRLPDWRVALALCLGKSAA
complement(1877813..1878355)       PHAGE_Entero_phi92_NC_023693: Phi92_gp065; Tbd_1778; phage(gi726646998)              1.40e-62            ThiobacillusdenitrificansATCC25259MNVVKTSLPEVLLLEPKVFGDARGFFLESWNRKTFSALGLDVDFVQDNHSRSARGVLRGLHYQIKDPQGKLVRVVNGSVFDVAVDLRRASPNFGRWVGYELSAENQRMLWIPPGFAHGFLVLSESADFLYKTTAYYAPEWDRGVCWNDPEIGIEWPWSGSPTLSAKDQVLPFLKDAEVYA
complement(1878398..1879279)       PHAGE_Entero_phi92_NC_023693: Phi92_gp066; Tbd_1779; phage(gi726646999)              2.28e-123           ThiobacillusdenitrificansATCC25259MKRKGIILAGGSGTRLYPATLAVSKQLLPIYDKPMIYYPLTTLMLAGIQDILVISTPQDTPRFEQLLGDGSQWGINLQYAVQAKPEGLAQAFVIGADFVGNGPSALVLGDNIFYGHEMTDDLGSASVRDTGATVFAYRVHDPERYGVVEFDDAGNAISLEEKPAQPKSHYAVTGLYFYDSQVVDIARNLKPSARGELEITDVNRHYLEAGELKVSIMGRGHAWLDTGTHESMLEASLFIETIEKRQGLKIACPEEIAYRKRYIDAEQLAKLAAPMKKNGYGRYLLEILDEHVF
complement(1879276..1880343)       PHAGE_Escher_phAPEC8_NC_020079: putative dTDP-glucose 4,6-dehydratase; Tbd_1780; phage(gi448260373)     1.01e-103           ThiobacillusdenitrificansATCC25259MILVTGGAGFIGANFVLDWLRANDEPVLDLDKLTYAGNPENLAALQGDPRHIFVQGDIGDRGLVGKLLSEHRPRAIVNFAAESHVDRSIHGPEDFIQTNVVGTFHLLDEARAYWVSLPEEEKAAFRFLHVSTDEVYGSLGPTDAPFTEQTPFAPNSPYSASKASSDHLVRAYHHTYGLPVLTTNCSNNYGPYQFPEKLIPLIVLNAVQGKPLPIYGDGMNVRDWLYVGDHCTAIRAALEKGRPGETYNIGGWNEMPNIEIVKTVCALLDEMRPDPAGPYARLITYVTDRPGHDRRYAIDASKIDRELGWRPAETFETGIRKTVRWYLDNMAWVEHVASGAYRNWVETNYSERVQA
