gi|221725460|ref|CP000629.1|  Agrobacterium radiobacter K84 chromosome 2, complete sequence. 2650913, gc%: 59.76%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
687020..688357                     PHAGE_Burkho_phi1026b_NC_005284: gp59; Arad_7774; phage(gi38707949)                  1.82e-40            AgrobacteriumradiobacterK84MQTSTGIRTPKRAALASWLGSAVEYYDFFVYGTAAALIFPKIFFSSADPQAAAMASFATFGVAYITRPLGAVVLGHIGDKFGRKKVLTFTLLLMGFSTFLIGCLPTYDHVGVLAPILLVIARLLQGISAAGEQAGANSMTLEHAPEHRRAFFTSFTLSGTQTGLILATLVFIPISRLSEEDLLAWGWRIPFFLSVIVVFVGFWVRRTLAETPVFVEESKKGEVEGVPLITLFSNYWMDVVRIVFAALISVVSTIFSVFTLSYAVNTMHIDRSLMLTVLVLANVAALVAIPLWAMLADRIGRKPVFIFGALGCAVLIWPYIWAISQGDLTLIFVLGILLSGIVYSASNGVWPALYGEMFDTRVRLSGMAIGTQIGFALGGFAPTISAALLGTGPTGWMPVAAFTSITAVIAAISAATASETFKIPMVQLGRQKNQVLQAPAGKQSI
688487..689155                     transcriptional regulator protein; Arad_7775                                         N/A                 AgrobacteriumradiobacterK84MRKTQSVKIESRSRKNDPDATKENILRIASEEFVASGFAGARVDEIAERTKTSKRMIYYYFGGKEGLYLAVLEQAYTKIRSLEGALDLQSMPPVQAMRKLIESTFDHDDQNPDFVRLVSVENIHRAENMKRSSVLSEMNIVVIDIISDILRRGYEDGSFLRKVDPIDLHMMISAQCFFRVSNRYTFGAIFNRDLSEKDTKNRHKAMICDAIIAFLKSPGTGE
689359..690147                     shikimate 5-dehydrogenase protein; Arad_7777                                         N/A                 AgrobacteriumradiobacterK84MHMQEGARLGLDYSYDLIDLQELGCTVSDLPRLIEDAEKNGFAGLNITHPCKQAAVTLVDELSADAAVLRSINTIVFRNGRRFGHNTDWWGFAESFRRGLSGASLDRVVQLGAGGAGVAVAHAVAGMGAKSIEIYDLDQAKVSALIFQIQSAHPRCVFVAGKDLPAAVREATGLVHATPTGMLGHPGLPLDEALIDPRFWVADIVYFPLETELVRAAKSKGCRVLDGGGMAVFQAVGAFELFTGRQADSSRMIAHFKSLQAR
690236..690251                     attL                                                                                 N/A                 GGCGATGTCACGTTGT
690287..690742                     PROPHAGE_Mesorh_MAFF303099: transposase; Arad_7778; phage(gi13475314)                9.03e-48            AgrobacteriumradiobacterK84MISTTISYKNHRFSPQIIAHAVWLYFRFPLSLRLVEEMLLERGVVVSYETIRRWGFKFEAAYAKQLRRKKPSQKDIWHLDEVLISIGGRKHWLWRAVDQDGYVLDEIVQARRDTKAAKRLLVRLLKKQSLSPKRIVSGVGAAFGDRSSCGL
complement(690751..691749)         PHAGE_Entero_HK022_NC_002166: IS903 transposase; Arad_7779; phage(gi9634149)         2.06e-60            AgrobacteriumradiobacterK84MLHKHNAARRHHIGKMKFKVTNWAEYEAGPRRRGSLTLWVTPEALDGWATSRRKTRGGQPRYSDLAIETTLMLGMVFGLRLRQSEGLLSSVLAMMGLDLAVPDHTTLRRRARTWKPPARSNDRQHVTDGPIHVLVDSTGLKIYGASQWLEEKHGTKSRRSWRKLHLAVDADSGEIIAHSPTDKEAGDATQLGPLLDQIDEEIDQFTADGAYDGTPTYDAVLRHSAGARVVIPPRSNAVERPNAQAACQRDDHIASMQINGRLKWQTSISYSKRALVETAIGRYKGVIGPRLRARLFIAQQTEAAIGVALLNRMLASGRPKSVRCPASAGATK
691865..692155                     PHAGE_Entero_HK022_NC_002166: IS903 transposase; Arad_7780; phage(gi9634149)         1.63e-15            AgrobacteriumradiobacterK84MPYKFHDSRHGKFQKGRYRVTNWPAYNESLRRRDDLTIWVSEDVAQEWMAARRQTRGGQRRYSDLAIEICLTLRVAFSLPLRQTRGFMRSIAKLMG
692159..692632                     PHAGE_Entero_HK022_NC_002166: IS903 transposase; Arad_7781; phage(gi9634149)         1.46e-10            AgrobacteriumradiobacterK84MPVPDFSTLSWRGMGLEVAQKSRAPDKPITLIVDRTGLKVTARLAGTVTSTVPKALVRPGERLHLALDPDSGDILASELTTEHVGDETALPSLLKRVDAPVARFLADGAYDGSGVSDCLAAAFGYDVVVPPPKNAVPGGNWQRNQHIEHIAKHGRMA
693071..693739                     PHAGE_Caulob_rogue_NC_019408: putative HTH domain DNA-binding protein; Arad_7783; phage(gi414089083)     1.63e-15            AgrobacteriumradiobacterK84MSRFSELKAIGPSSTVSNSPISQVERDFSSGAHRMKLLDAGMTSMDDRAAEAFVKHSQFPRSAGRDIDTPSIHPIDRHVGQQLRIIRIHSNLSQTELGHKVDLSYQQIQKYESGKNRMSASVLYEIANCLNVPISRFYDGLPQAGSELVNGGLPEIDERIAYLATSEGRRFVEEILRLPPRLRTRTFALIQVLTGDDEETAGQGAPANAETTHQTEGDEHEH
693825..693840                     attR                                                                                 N/A                 GGCGATGTCACGTTGT
complement(693876..694580)         PROPHAGE_Mesorh_MAFF303099: transposase; Arad_7785; phage(gi13475314)                4.81e-85            AgrobacteriumradiobacterK84MISTTISYKNHRFSPQIIAHAVWLYFRFPLSLRLVEEMLLERGVVVSYETIRRWGFKFEAAYAKQLRRKKPSQKDIWHLDEVLISIGGRKHWLWRAVDQDGYVLDEIVQARRDTKAAKRLLVRLLKKQSLSPKRIVSDKLRPYGAARRNVMPGVEHRSHKGLNNRAENSHAPLRKRERMMQGFRSVGGLQRFISVFSAIRNLFVPAHQKRSALATHIHRIRAMAHWKAVTGATA
694976..695998                     PHAGE_Sinorh_phiM9_NC_028676: putative DNA polymerase III subunit epsilon; Arad_7787; phage(gi966199460)     1.39e-24            AgrobacteriumradiobacterK84MFSILKPDHQSSKARMDPQLDMFAKPVEARLQPREAPARKSRSLPVPASLTDEEMVRKLEDGGQYRILRKLVPRKIAVSRRPEFQRVGVILDTETTGLNHRNDEIIEIGLVAFTFDDFGHIGDVIGVYGGLQQPGTPIPPEITRLTGITDEMVEGQMIDMQQVRRMVAPADLVIAHNAGFDRPFCEAFSNVFATKAWACSVSEIDWNARGFEGTKLGYLIGQAGYFHEGHRAIDDCFALLEVLDRNVGEEETPFAELVRTSGQSRVRIFAEHSPFEMKDHLKGRGYRWSDGSDGRPKSWWIEIDEDALCDELHYLRSEIYRWEEADPPIQHLTAFDRFKA
complement(696107..696586)         conserved hypothetical protein; Arad_7788                                            N/A                 AgrobacteriumradiobacterK84MSAELPLVRRLEPWHANVGKRLVKSPRVYVRDSGITHTLLGLTTQKDLLGHPVVGASWEGFVIETLIAAAPAGTESNFYRTSAGAEIDLLLTPPGGRPWAIEIKRSLTPKLEKGFYLACEDIDPARRIVVYPGQEVFPLKNGIEAMPLASLGKSLLDLV
complement(697028..697621)         hypothetical protein; Arad_7790                                                      N/A                 AgrobacteriumradiobacterK84MLAVLHQNDLNPGDPGIGQPCRLRDRSLKHRLLQPSGVLTPSPADSFARLQMAVEQNLREQRFLRSTGPHAQAAGKSSVINGASEGSASLIFDYDFQPPNKSRSNLPFGLSKNRSLNNFETTRGRKPTLSSISTTENFFISMVIVRVSSQRRYVSESSELKPFCVAHAAIACAVMTCPIAEMKTATMHVQIIPLLSE
complement(697685..699721)         methyl-accepting chemotaxis protein; Arad_7791                                       N/A                 AgrobacteriumradiobacterK84MSISIFSRISTKLVMFSGTGIFLVAVMLITAWQGAQLTSERSTYQKDMLVVSRDLVDAKASLRGMQVGVRDLRLATSPDELAAATDYIAARHHSVIKYLDEAMDKLRLQLNRDRIVKLKTLTESIFAMTSDMNEVVKVKVQLKAGDPSVDAKEREVQAKLLAVSDEASKLLDEGVDSAKAVATKAEEEANAASASALRLDLGVGLLTIGTLIAAAVVGARLIAKPIVRITESMNILAQGDLDANIPFGDRRDEIGSMARAVRVFKENGIKVREMNTQEAALQAKSADLQSSIGAVVTAAVAGDFTQRITRDYDNPDLNRFAAQVNELVTSVDRGITETRRVVSALADGDLMESMRGEFHGAFGELQQNVNATMTNLRSVLGEVRAAIDTINGGAGEMRIASGELSKRTEQQAASLEETSSALEEITVAVKNSTERALEASRMVDEARRSTEQSSAVVKDAVSAMGRIELASGEIGQIINVIDEIAFQTNLLALNAGVEAARAGEAGKGFAVVAQEVRELAQRSAHAAKDIKGLINRSGDEVNSGVRLVTATGNALGLIQGHVAKINEHMHSIATAAKEQSTGLHEVSTAVNEMDQVTQRNAAMVEESTAATSRLAEEAASLSRLIARFKLDGKGAIPRATDQSSKPVTSPAHSLRQKLTGAYGGRSATAVAVSSWEEF
700877..700889                     attL                                                                                 N/A                 TGCCGCTGCAGTC
701318..701461                     hypothetical protein; Arad_7795                                                      N/A                 AgrobacteriumradiobacterK84MPNLGAAQIREASSQRSKGETITDRERELAVTLRKPRAYHYGIGKRV
complement(701527..702648)         PHAGE_Lactoc_TP901_1_NC_002747: ORF56; Arad_7796; phage(gi13786587)                  3.55e-11            AgrobacteriumradiobacterK84MKWNWTQRGWPQFTYDAAALEPLERRFLLSSGEVIGAVRHISDEERNLLRIELLSDEAVKTSEIEGEMLDRLSVQSSLRRQFGFDADNRPIKPQERGIAEMMVDVYDSWSVPLNHETLFRWHDMLMTGNRHIGTIGGYRTHDDAMQIVSGRLDRPTVHYEAPPSRQVPAEMAAYTEWFNRSAPKGEIPLPALTRAGIGHLYFESIHPFEDGNGRLGRALAEKSLAQNIGHPSLIALAYTIEHGRKAYYDQLERHQRTLDITEWLVYFGETILEAQQTTLMRVTFYISKAQFYDRFRGQFNERQEKAVARMFREGPTGFKGGLSAENYIAITRTSRATATRDLHDLVEKGALTRSGERRHTRYALNLWEINGTE
complement(702813..703994)         PHAGE_Entero_P1_NC_005856: Cre; Arad_7797; phage(gi46401628)                         6.42e-05            AgrobacteriumradiobacterK84MTRKAITQPVPADPVQRRAEELDALDAILPFDRRDQLTTLLTDDDVATLKHLANQGMGDNTLRALASDLGYLETWCRLSTGARLPWPAPESLLLKFVAHHLWDPAARAEDSSHGMPTQVEDSLRAQGLLRVDGPHAPDTVRRRLTSWSILTRSRGLTGAFSAPSLKTALRLAVRAAPRQRRRKSKKAVTGDVLAKLLATCAGDRLVDRRDRALLLLAFASGGRRRSEVAGLRVEDLVDDEPVRADPADANSPPLPCLTIHLGRTKTTTADDDDDEQVVLIGRTVIALKQWLAQARIETGPLFRRIDQWGNIDRQALTPQSVNFILKARVKQAGLDPEAFSAHGLRSGYLTEAANRGVPLPEAMQQSLHRSVTQAASYYNNAERKNGRAARLVI
708808..708820                     attR                                                                                 N/A                 TGCCGCTGCAGTC

#### region 2 ####
1285411..1286970                   PHAGE_Strept_SF3_NC_028952: hypothetical protein; Arad_8470; phage(gi971759839)      1.14e-08            AgrobacteriumradiobacterK84MAHIVIINPRFETSYWGLEHALPLFDVKANLPVACLPLLAALTPAEHTVTLVDENVEPIDYDLCAQADIVALTGMIVQRFRMTEILTALRARHCFIVVGGPWVTVKEDYFDGLIDVKFIGEAEETWPQFLLEWKEGHHAERYEQSGKTDMSTVPVPRFDLLKMDDYAVGSIQFSRGCPFTCDFCDIIVVFGRKPRIKTSVQIIAEIEALLAVGMDTAFIVDDNLIGNKKAIKEVLREVVAWQERHHYPMTFLTEASIDLADDAELMQLMVDANIRVVFVGIETPNEEALRETKKLQNLRKGGTMLDKIHAIQQTGMEVWCGMILGFDSDDATIFEAQRVFIKDARIVNAMIGMLAAIPKTPLYTRLEQEGRLDHADPPAYGTNVIPLNLSRETLRDGYLAVLSDLHQPAAYFDRLDALYLDARIQPERTRLRHLRRHPLRLVALNVMWALEAIGIFTRLMRRVPEADLRNIYRQRLWKLLLRRRSPVVLQIYAIKCAMHYHAHLMVQQMRTGGDIVNSF
complement(1286980..1288701)       PHAGE_Bacill_SPbeta_NC_001884: ABC transporter; Arad_8472; phage(gi9630145)          4.97e-28            AgrobacteriumradiobacterK84MLRRFFSYYARYKTLFFLDFGCAVVAGLLELGFPLAVKLFVDQLLPGRDWGLIAATTAVLLMVYALSTGLSAIVNYWGHALGISIESDMRRQAFEHIQKLSFRYFDNNKTGHLITHVTKDLEEVGEIAHHGPEDLFIAIMTFIGAFLLMFSVHWKLALLTTTIVPFMTWLVSRYGAKMTKNSRSLFGKVGDFNTRMQETVGGIRVVKAFANETYESQLFAGHNEDYKATKLDGYAYMTAGIALSYFSTRVVQLVVMMAGTWFVISGELSYGGFISFLLLINVFFRPIDKITSVIETYPKGIAGFKRFLSLIDTQPDLADRPNAMEVKHLKGNITYKDVSFGYSEHGTIFADLNLTIAAGETVAFVGASGTGKTTICSLLPRFYDVTGGSITIDGIDIRDMTQASLRSQIGIVQQDVFLFGSTIRENIAYGRLGANDEEIMEALRRASLDEFVLSLPDGLDTPTGERGVKLSGGQKQRLAIARIFLKNPPILILDEATSALDTATEYAIQQALADLSTGRTTLVVAHRLATIRNADRIIVMGPTGIVEQGTHAELLARDGAYARLHNAQFGALV
complement(1288920..1289633)       conserved hypothetical protein; Arad_8473                                            N/A                 AgrobacteriumradiobacterK84MINEDGYVPASELAQRNGVRFPNESIEYRQARDALLAEEIELRRHIERVAAQRRALPPGGIVKKHYQFISPDGPLDFADLFDDKESLLVYSFMFGPERTRPCPMCTCLLSALEGEVLDIEQRMAIAVVARSPIDRLMDFKRERGWRNLPLYSDPTGEYSRDYRALGPGGSDDAAVNVFTRRDGTIRHFWGEEMGPVTADPGQDPRGAPDLMPLWTILDMTPEGRARDWYPKLAYGRA
complement(1289768..1290403)       PHAGE_Cellul_phi17:2_NC_021798: chaperonin DnaJ; Arad_8474; phage(gi526177822)       6.12e-05            AgrobacteriumradiobacterK84MTDPYDILGVGRDASDEQIKAAYRKRAKGAHPDSGGDAEAFGRLKKAHELLLDPVRRKVFDDTGYDVELTDAVDLQALVAIEKLITDMVLDEREPGTFDPVAHMRACLLEEIRKANFSKSELERHSDRIRLHLDRLGKRPGKDVVGHMLRARIKAIATAIGETDAKIGATERACDMLDGYLYVMDTPMLEDEDGEPEIEWDEAVEARSAAQ
complement(1290680..1292182)       PROPHAGE_Shewan_MR-1: serine protease; Arad_8476; phage(gi24375430)                  1.86e-82            AgrobacteriumradiobacterK84MSSLLRKHRAAAIVGAAIIVGAGALPFAFNASTVASAAEPSGIIAPGGSFAPIVDADKPAVVTVTTTMKATDTSADTSNSPMDEQFRQFFENQGIPFPQQQAPQRHQSQSAMALGSGFIISPDGIIVTNNHVIENATNIKVTLDDGTELPAKLLGADAKSDLAVLKIQAPKPLATVAWGDSDKLKLGDQILAIGNPFGIGTTVTAGIVSARGRDLHSGPYDDFIQIDAPINHGNSGGPLVDREGNVVGINTAIYSPNGGSVGVGFAIPSDEAKAIVAKLEKNGSIDHGYLGVAIQPVTSDIANAVGLSQPQGALVASVNDGTPAARAGIKSGDIVTAVNDETVKTPKDLSRLVADLSPGDKRSLTVWRDGKSMDVNVTIGGNDDGKQAANDGGDGKVLPSNQPSIGVGLADLTPDLREQLNLPHSVQGAVVASVNPDKSAAAAGIQAGDVIVSVNDQPVHSAHDVQSAVAEAGKAGRKSVLLLIERGGDKTFVAVPFSAA
complement(1292457..1293116)       PHAGE_Bacill_JL_NC_028982: hypothetical protein; Arad_8477; phage(gi971762751)       2.13e-06            AgrobacteriumradiobacterK84METALYLPIKSFLETAGYMVKGEIGNCDLVGLSDGEPPVVVICELKLTFNLELVLQAVDRAAASDEVWIAARVSAKGKGRESDRRFRDLCRRLGFGMLAVSDSGLVDIIVSPVALMPRKNLRKRSRLVEEHRRRKGDPALGGSTRSPIMTAYRQQALACAAAIRGGLQRPKDIRASVPKAAQILQDNVYGWFERVDRGIYSLTALGVEALARWPQMETP
complement(1293152..1294027)       PHAGE_Burkho_phi1026b_NC_005284: gp58; Arad_8478; phage(gi38707948)                  1.47e-14            AgrobacteriumradiobacterK84MDVFVQVAELRSFSAAGRKLRLSPSAVSKLVTRLEDRLGTRLLVRTTRSLQLTPEGEVYLERAQAILADIQEAERMVAAGGAAVPHGRLRVSASVAFGVCYVVPLIPEFLTLYPEVELEISLSDSVIDIVGERADVAIRVGSLRDSSLKARKLLESRRVIVASPAYIERKGRPETPDDLDHHNCLTFNFRPTAEGWSFRDPHTGSVSVKPVFGNLQANNGPTVRSLCLAGVGLARVGQFHVQPDLDAGRLVPVLEDFNPEDIEMIHAVYAGHDHLAARIRAFIDFLALRIA
