gi|00000000|ref|CP000688.1|  Dehalococcoides mccartyi BAV1 chromosome, complete genome. 1341892, gc%: 47.17%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(485898..487199)         PROPHAGE_Escher_Sakai: protease TldD; DehaBAV1_0502; phage(gi15833371)               4.29e-15            MLEKILEQAKKVAEQAECFMVESESTPIHFESNQLKNIESKQSLSLALRIVKDGKIGYAASSNPADWPRLVNMALETAAYGQTAHFQFPAAQTYPEVKIFDPEIETVSLEEMVNLGKEMVAGLLEINSELICSSSLTKSTRKVSLLNTSGADISFKKSLFSMGLEGTLVRGTDMLFVGDEFSSCHPIRSSLEAVNLVSKQLKRARQNVPLQSREMPVIFTPHGVASTIIPALSAALNGKLVQEKASPLAGKLGEQMFDPAFNLVDDPTQSFSPNSRPFDDEGTASQITPMVENGVIKNFIYDLRTAALAKAKSTGNAERHGGQPAPGFSALMIKPGTLSFEEMVSDIKEGLVVEFMMGAEQGNVLGGDFSGNVLLGYKIENGQITGRVKDTMLSGNIYSALKTINAIGSDGRWLDGELFTPSMYFPNLSVAAK
complement(487201..488577)         PROPHAGE_Escher_Sakai: protease TldD; DehaBAV1_0503; phage(gi15833371)               5.30e-44            MTELRNIAHELSQQLYHYRADYLEIHLEESTSSYISYRGQNLDTAGRGSDLGGNVRALVNGGWGFVSFNSLDDIRKRIDLAIHQASLAGSTQSQFASTPSVTYAQTDELSQSSVERPLEDKKRILDEYKDLIWQTKGIKTSFIRFSDGYRRRFYVNSRGSVIEQSRSDINFNATAIASGDGELQQSNISVGSRGNYNAITGLHSQIKDMTEHAVKLLSAPKVKGGEYTVILDPILAGVFVHEAFGHLSEADHIYENPQMREVMVLGKKFGPKILNIIDNPTMPDLRGSYKYDDEGVAATKNYLIREGKLTGRLHSRETAAKMNEPLSGNARAISYRYAPIVRMSNTYIEPGVSTLEEMLDGVKEGIYVKNWYGGTTSMEMFTFSSGEAYMIRDGKIAEALRPVVLSGNVFDTLHNIDMIGNDLDMNQGGGCGKSGQSPLPVSNGSPHIRIQKCLVGGA
488715..490007                     PHAGE_Bacill_SP_15_NC_031245: hypothetical protein; DehaBAV1_0504; phage(gi100155)     7.68e-24            MGLFGTSGIRRVVDDRLMEIALKVGFSVGKRYRRVVLAGDSRTSTPAIKRILSGALVAAGADVIDIGLVPTPTLAFIARDFDTGLMVTASHNPAEYNGIKFLNPDGSAFSYLQQQEITKDVESSRSPSLKWDSFGQINAFPCTVEKHMEHILNYLPDKCRLKVVVDCGGGAASVITPWLLQRMGSRVISLNDTTHGFFPHPPEPLAENLTGLIQTVRESDADLGIAHDGDADRMVAVDKHGNFISGDKMLVVFARAAKADKVVTTLDASMSVEEMGFKVIRTAIGDNYVSEELKRQGNFGGEPCGAWVFPESSLCPDGIYAAARLLNLVSRQPLAELISDIPEYSMKRGSVAGGGLNLSLVEESLQCLNPLSSSLLDGIKLNLKDGWLLIRPSGTEPKIRLTAEAKTPEQCETIYQTGLKCLKSCLSREK
490009..491211                     PHAGE_Bacill_G_NC_023719: gp309; DehaBAV1_0505; phage(gi593777765)                   2.94e-21            MKAVILAAGEGSRMRPLTFTRPKVMLPIAGKPILEHLLMEVSAAGIKEFVLVVGYRDEQVRSYFADGAKWGVKISYCQQTRQLGTAHALKQLENQLEGNFLVMNGDILAESADISALAAGSETTLSVLEVSDPSSLGVLETDGDRVRCIHEKSANPPTNLANAGLYLFTPRIFKAISGTPLSPRGEYEITSSIQLLIDNGTEVGYRRLVYWQDVSYPWDLLDVNASMLKNLAPCVYGTVEENVVIKGTVEIGEGSLVRSGAYIEGPVLIGKNCDIGPNCYIRPSTSIGDNCRVGASVEIKNSIIMDNTKIPHLNYVGDSVIGQNCNLGAGTKLANLRFDGADIIAGGVNTRRRKLGAVLGDGVETGINVSLNPGVLIGSGSRIGPGAVVSGLVEPNSYIG
491229..492410                     PHAGE_Bacill_G_NC_023719: gp309; DehaBAV1_0506; phage(gi593777765)                   6.63e-18            MKQAVILAAGEGQRLRPFTASKSKVMLSIAGKPLLEYVIESLAQNGIRDIILVVGYKRERIFDYFGQGGRFGVQISYVQQPNQLGTAHALRQVKDKIKGDFLVLNGDQLIKPSTISGFVKQPPQAVMVKAINGEDPSRYGVVTSSGGLLTSIEEKPSIAKSNFINTGIYSFSMAVFDYIGEHLDIPVVLQSMLKDGLDIHVAESQGAWLDIVYPWDMLKLNAVVSAELKPGVAGTIESGVVMKGPVRIGKNTVIRSNSYIVGPVIIGEGCDIGPSVCIYPSTSIADNVTVAPFSQIKNSLIYSGNSIGVASVIEDSVIDRGCVICGQFSAPSAEIETRINDGLHKIKVGTMMGEGCTVGNAVVLQSGTVVGNSTRIAPLRTLSGNIPDGSLVV
492411..494192                     PHAGE_Pseudo_vB_PaeP_C2_10_Ab22_NC_026599: putative L-glutamine-D-fructose-6-phosphate amidotransferase; DehaBAV1_0507; phage(gi764161056)     8.49e-09            MCGIVGYTGKRQAQGVLYDCLCRLEYRGYDSCGIAVNTPEVQVFKDAGKVHDILQNAPLFKGTAGLGHTRWATCGEPTQINAHPHTDCTGKICLVHNGVINNYSQLLKRLEGNGHKIVSDTDTELIAHLIEEYDKGDLEEAVRLAVKEIEGSYALVVMRSGENTLVVVRQDSPLVIGVGDGEYLVASDVPAILGYTNRVIYLDEGDIGTISPDSLKIRRNGGYIVPLVEKVNWTQDESQKAGYSHYMLKEIHEQPRVIQNTLINMPLPESFNKSEILEQSRKTGILFLACGSSYHAALTARYLVEEHLNIPVRLEVASEFNYMHRLLPCKLAVVLTQSGETADVLRAMRRLKQAGCMVVAITNVAGSTAARLADHTIYTQAGPEIGVAATKSFIAQLIVLYALCFAGASAANIRYQDYLSTMRLLPSVVQSILGSHQNIKDAAVEVAKSKSAFFIGRGINYPIALEGALKLKEISYIHAEGYAAGELKHGPFALLSPETPVLALVSRDQTYEAMLTGLREIKVRRAPLIVIGEAGDEQLGQLADRVISLPSFNRLFNPILFTVVLQLLAYYVALELGCSIDTPRNLAKSVTVE
complement(494200..494652)         phospholipid-binding protein, PBP family; DehaBAV1_0508                              N/A                 MLLGSSAFACGEYIPRRFSGLGSNISPPVHWMQLPPDTKSLALVLEDPDTSKAFTHWLIYNIPPNRVGLPEAVPTEPNLPDGVRQGLNSEGETGYTGPYPPPNRVHHYHFRLFALDTELKLKASCHQADLLKAMEGHIIDQTDLTGLFVV
complement(494664..495368)         PHAGE_Strept_VWB_NC_005345: hypothetical protein; DehaBAV1_0509; phage(gi41057269)     3.52e-06            MIKGVFFDLYNTLIGYQPSREEMTVKLLADMNYPINENDLYLPMNKADEYFYLQNAQNPISLREKPEQFAVWSHYYRIILEEIGIEAKPELINTLISRWKNLKWEMILYEDVIPCLKNLKSRNLKIGLISNADRDMSELFNKTGLNTYLETVVISQEVGVTKPNPLIFQAALRKSGLTAKEVLYIGDQYQVDYIGAMNVGLNPVLLDRRNCYLDLNDCRRITGLGELEYCIDNT
495507..496811                     diaminopimelate decarboxylase; DehaBAV1_0510                                         N/A                 MEPRIQVFPKNTEVKNNHLIIGGVDVAGLCAKYGTPLYIFDELTIRQNCRDFKREFSRRYADSSVSYASKAFLHPALLKILAEEGMSLDVVSGGELSVANNAGFPMDMVYLHGNNKSAEELRLALRLHVGRIVVDSFDEIKLLSKLADESGHIPDILLRITPGVDAHTHHYITTGKLDSKFGFPLFQAAEAVGLAMAQASLNLVGFHFHIGSQIFETQPFLDAIDLVLDFAAQVQERYGFDIEELDIGGGYGVQYEVDKPAPPISAYAEAIGAKVVSKCRSLKLTPPSLNIEPGRAIIAQAGVALYTVGVIKDIPGIRLYASVDGGMGDNIRPALYEAKYEAVVANNVQSAEKEKVTIAGKFCESGDILIRDIELPSLRTGDILAVPCCGAYCLPMSSNYNGYHRPAVVMLKNGEDRLIRRRETVEDLSRLDSV
496825..497856                     PHAGE_Pseudo_PaBG_NC_022096: DNA polymerase III subunit gamma; DehaBAV1_0511; phage(gi530787891)     1.81e-14            MWRIIGQDKVVSFLSNSLSQDKLSHAYVFHGPSGVGKKRMALTFAQALNCQASPPPCQECSVCGRILSRNHPDIIHLELLSAEDASDGKAKAEIGVKQIEDIQHAASLPPFEGKYKVFIIHQAEKLSLESSNRLLKTLEETGSQNIFILLTADKSLLLPTVISRCQILELRYVEINLIREALLKQGLDAEKAELLSHLSHGRVGWAMEVASSPEILEERKANIEKIIWILGQDEEERFDYASDLSNLFGQNRTAAEAILDMWLDVFRDMLLLKADANQNMTNIDYKDILYMASDKLGLTDIRIAIDNILKTEDRLRANANPRLCLEVLMLSLPFVKEGTVKNG
497849..498682                     PSP1 domain protein; DehaBAV1_0512                                                   N/A                 MVDIVKIRYKQAGKIYYFDPAGFELYPYDCVVLETSRGEELGWVVASPSQVEESSLEQPLKPVIRLATAEDMNRERQLEEKNQSAVAECIELVSKLNLPMKLIRAEYSLDENHVTIYFSAEDRVDFRELVREISRKLRVRVELRQIGPRDEAKMVGGYGRCGRELCCCSFLSEFDPVSIKMAKEQNLPLNPQKISGVCGRLLCCLDYEYETYKAAKAKMPKDGLKVSTPMGKGEVVGGNPLEEMVFVLLESGANAEVALKDIRPDKEGRRPDAPLHH
complement(498671..499201)         PHAGE_Cyanop_S_TIM5_NC_019516: HNH endonuclease; DehaBAV1_0513; phage(gi422936286)     1.19e-27            MDNHQVLVLNQDYQPLNVCHIRRAVLLVYQSKAEMLEDGLGFWHSEKDHFALPSVIRLSCLIKHPPLRPKLNRAEIFSRDKHTCQYCGRKDLELTIDHVNPKHQGGPHVWENVVAACLHCNRHKAGRTPEQAHMKLMCTPGVPQYRYGYSLPRANANIRHEWRPYLGLRDEPKLVV
complement(499273..500682)         PHAGE_Bacill_IEBH_NC_011167: DNA replication protein DnaC; DehaBAV1_0514; phage(gi197261519)     1.92e-26            MEHIKEILGKQINTRANCTTTSSKDKAVKAAEENLCPLCKGAKFVYPVSAEGVTDFSRVVPCQCTQSESGADREKRLLTYSCLGGLHKYTFEKLNSLGKTDEPHSQDTFKQAYEAALDFASNPAGWLVFTGPSGAGKTHLAAAIANRRLSTGQPVLYKRASELIDDLKKSFEPDSDAGYSQSFDILKNAPLLVIDDLTVQSGSEWSKEKLDQLLTYRFSQELPTIITLSTPINELDPRIQSRLLDKSISKIYTVAPNPEDSLEYRWDNALALQKKMTFENYDHKRSNLTPEQRQNIDAAYNLALDFSRNPESWLVFQGETGCGKTHLASAIVNERYRQGKPAMFVVVPEFLDHLRSTFSPESKTSYDQMFDAVKNAKLLVLDDFGEQSSTPWAQEKLYQVINYRYNRRLATVITTRCQLSEIEVAISSRFVDPQISMVFNITAPNFRCDSTGPQKQRPVSRMRTTRPQR
complement(500606..501316)         PHAGE_Deep_s_D6E_NC_019544: replication protein; DehaBAV1_0515; phage(gi423262361)     1.48e-07            MSNPPPVPVRQEFTPVSRYFIHRVAPLIADPAELKVSLAVFSLVQAKKGYPRYTTLAELGAEETLMNALGKTPNESLQSLEKALKMAVERRTLLGLELKSGKHNHQLYFINTETDTAVVEKIKNGSLALPGLKEVTAEVITGKTGQPNIFKLYEQNIGLLTPMLADNLKEAEKLYPEEWIAEAIKEAVSLNKHNWRYIERILENWSSQGKNSGTHKGNTGETDKYKGQLYDHLVQR
complement(501313..502689)         PHAGE_Strept_315.1_NC_004584: putative DNA polymerase III delta prime subunit; DehaBAV1_0516; phage(gi28876155)     1.20e-106           MLDSKLPPYDVDAEESVSGSLLIDGQAIFDIIPILKPQDFFTEPNRLIFEACMSLYGRSDAINQVTVAQELERLGKLEKCGGSAYLSHVVSVVPTSLDIEHYARIVYRLSVMRQLIDAGQKISELGFKADPDVSDSLGKAEDLLFRLRHERSSLGFTHIKNILDKYFEPVPAPGSEGYQAIPHVLTGLTGMDTFLGGLQRSDLIIMAGRPSMGKTSLALNIARNAAVEQRACTAIFSLEMSRESLVQRLLSNEAAVNSRSIRLNESNPDEERKIMDAIGVLSEAPIFIDDSPQIRVAEIRSKALRLRYEQNIDLIIVDYLQLIQGEGNTKENRVQEISYISRSLKGIARELNVPVIAISQLSRAPEFRSSHQPQLSDLRESGSIEQDADIVVFIYRDEFYYKEEEWANLHPDQEYPREIADIIIAKHRNGPIGTVKCRFRHDLTRFENLGSSTEPSFL
complement(502690..503145)         LSU ribosomal protein L9P; DehaBAV1_0517                                             N/A                 MKVVFLKDVPGRGKTGDIKEVNDGYARNYLIPNKLAMPASAAVKSEIAAKQAAEERRKAKAEAEMVELAKNLDGAKVNLKAKTGAKDKLYGQITTTVIAAEIEKQTGKTIDKRKLELAEPIRQLGNYEVVIRFNKDLSSKINLAVTAEENT
complement(503215..504135)         PHAGE_Bacill_G_NC_023719: gp344; DehaBAV1_0518; phage(gi593777800)                   2.82e-75            MSTLLYDVIIIGGGPAGLTAALYTGRSKLKTLVIERAFVGGQITRSEKVDNYPGFPEGITGFDLTQQMQIQAEKYGVEITSAEVNAIHKTKDHFEVVTETGGLSGRCIIICGGTERNKLEVPGEEEFSGRGVSYCATCDAPFYNDKVVAVVGGGNMAFYEALHLSEFAKKVYLIHRRQGFRADAVLMDKAKNKSNIELVLDTVVTSINGQDSIQSLSLNNLKTLKTSTLPIDGLFVAVGLQPNTTYLKGVVDMDKNGSILVNNQMETSVSGILSAGDIRSGSIRQVISAAGDGAVAALSAKRYLDL

#### region 2 ####
1066358..1067197                   PHAGE_Staphy_SPbeta_like_NC_029119: DegV domain-containing protein; DehaBAV1_1075; phage(gi985761237)     2.62e-16            MTVKIVTDSTSDISQKLAAELGITVVPLTVSFGNEHFKDGVSITPEQFFTRLTSQNIYPTTTQPSPGLFLETFEKLCEETDEILVITVSSKLSGTLSSAKNAAAIIHGRCQVEVIDSQRVIMGTGLLAIYAAELAKTGLNLKELSQAISQKLDDCHPIMYFDTLTYLHKGGRMGKAQSLVGTMLSIKPILKMEDGIICPLSKVRSRRAGMDYLYKFINSYPKIKYLAVEHATSPEDADELVERLGNILPKEQIFRSRIGPVVGTYTGANAVAVTVLEDK
1067214..1068056                   PHAGE_Staphy_SPbeta_like_NC_029119: DegV domain-containing protein; DehaBAV1_1076; phage(gi985761237)     1.77e-14            MAVKIITDSTSDIPPEMAKNMGITVIPLTVSFENEHFLDNVTLKPDEFYRRLSLSGIYPHTTQPSPAVFKENYEKLMPQADGILVITISSKLSGTYQSALSAVTMLENISCPIEIIDSQTVSLALGLLAIKANDLAKSGKTLGEIKEAITQSLPDAQPVMFFDTLTYLHKGGRIGRAQSMLGSLLSVKPLLTVRDGVVTPLTRVRSLQAGMDQLYNFAAQHSTLEYVGIGYATSTTDALKLKERLAPLFPPEKIYLTQVGPVVGTYTGPNTLCINIIGKS
1068081..1068926                   PHAGE_Staphy_SPbeta_like_NC_029119: DegV domain-containing protein; DehaBAV1_1077; phage(gi985761237)     1.79e-11            MNVQIVIDSTSDITPQMAKAMGNVHIMPLTVSFGNEHFQDGIDITPEEFYTRLPQDENIPTTTQPLPGYVIELVTRLSEETDQILILTLSQKLSGTYQSALYTKKTLESPTCRIEVFDTNLTTLGHGLRAIRASDMAKEGANLDQILEELRKPHNYLAGVMYFDTLKYLARGGRIGKAQSLLGAMLSFKPIITVQDGEVSPVTRVRSRQAGMDYLYNYAASRKNIRYLGVEHANTPEDAEALIERLGNIFPKEKIIRSRIGPVIGTSIGPNAVCVVAWADA
1068956..1069888                   PHAGE_Staphy_SPbeta_like_NC_029119: DegV domain-containing protein; DehaBAV1_1078; phage(gi985761237)     1.43e-18            MSVKIVTDSTVDLLPETIKELGITIVPVYVMSGNKTYRDGLDITQTEIYNRMLTGEQFTTSQPTPADFASVYKNLSKETDQIVSLIMSAKLSGTYNSAVQGRELAKSSSNIELIDTKATSGALGLLATQAAEMAKMGESAGNIIDTVRNNIPHVHIWALLDTVKYVLRSGRLSSASNLISGVLSIRPMITLREGSLWPASIHRTRNKGLEKLAELVKTNRNVEAVQIVQSVDLAEAQTLKEKLADFIDQSKIHVSQLGPALGVHGGPGTLVVAIKEKLGNIGTATDETEDRKSFKLPSIHLPKLGFSSLH
1070015..1072471                   PHAGE_Bacill_CampHawk_NC_022761: UvrB helicase; DehaBAV1_1079; phage(gi557478868)     5.14e-05            MGVDTGAFKKILQLEAQKGFADTAVMGGLDHFLSRWAKEAVTGINNPDDLLDFHHLKLSDPNYAKMTEDKRREWVDAILAFLPKLENQPIGRPAPQKAPKAKSPSKTPAKPKADTRLPALDGDVSLVKGISAATAPKFHKLGVNTVRDLLYYFPNRHLDYSRLKKISQLEAGPEQTIIANVWQSKVNFMSGRRSTEAVLGDDTGNMRAVWFNNPYMVRNLKPNARVVLSGRVSIFQGRPVFESPEWEELPDEADLIHTGRLVPVYPLTAGLHQRSLRRLMKNFIDISSPNISDFMPAETLKRTRLLPLSEAIRQAHFPDDEELKNAARNRLAFDELFILQLGVLAKKKRWHEQAGRALNVNIPDIDRFVSKLPFKLTDAQTKCLADIKADISKGVPMSRLLQGEVGSGKTIVAVISLFTAASNGLQGAFMAPTEILAEQHFKSVTRLFASIARVSTLLDGIYTFEGLLDRPLKVALLISDMKGSQKDILKEKIKKGEVDIAIGTHALIQKEIRFKSLGLAVIDEQHRFGVEQRSALRSKGLNPHILIMTATPIPRTLALTLYGDLDLSVIDELPPGRQSIKTRWLKPEQRNSAYTFIRKQIQEGRQAFIICPLVEESEVIQAKAATAEYETLSREVFPESRVALLHGRMNASEKETIMRHFSEGEMDILVSTPVIEVGIDIPNAAVMLVESADRFGLSQLHQFRGRVGRGTEQSYCMFLAENPSLLGQERLSIIESTQDGFKLAEEDLRLRGPGEFFGTRQSGLPKLRMASISDVGLLEQARKEATRLFELDPELSLPENAPLEAEVRRVWPKKSEWS
1072479..1073165                   PHAGE_Synech_Syn5_NC_009531: HNH endonuclease; DehaBAV1_1080; phage(gi148724494)     8.64e-07            MIPGEIISYLDMCQAEGINLQKGMNFKLRNGNNIILMSVRDGAPYADRFEDEGKVLIYEGHDINRTHPSINPKNFDQPMYTQGNKLTANGLFYNAAQKAKQTKTPEIVRVYEKIKPSIWVYNGVFNLVDAWIETLNNRQVFKFKLEITSEPISNIIKPNLDSDNRAIPPEIKRAVWARDQGKCIKCGISSNLHFDHIIPYSKGGSSLVAENIQLLCASCNLSKHANIE
