gi|00000000|ref|CP000691.1|  Acidiphilium cryptum JF-5 plasmid pACRY03, complete sequence. 88953, gc%: 62.13%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

#### region 1 ####
5421..5432                         attL                                                                                 N/A                 GATCTGATCGAG
9651..11534                        PHAGE_Aeromo_AS_gz_NC_042019: tail fibers protein; Acry_3480; phage(gi100170)        1.70e-20            AcidiphiliumcryptumJF5MCDTAVVGRGFAQRVTEGFASQNLVDPIATLEEYLNREDWRVKANANQSYSLGGLILHGAAKLVANYWLDHIYPPEVGRAHREADLHIHDLDMLAGYCAGWSLRTLLVEGFNGVADRVEASPPRHLSSAVGQMVNFLGTMQNEWAGAQAFSSFDTYLAPFVRKDGLSYAEVRQNIQEFIYNLNVPSRWGSQTPFTNITFDWVCPKDLRDQIPLIGGNEMPFRYGDLQAEMDMINHAYIEVMSAGDANGRVFTFPIPTYNITPDFDWDSENAERLFAMTAKYGLPYFQNFLNSDLEPHMVRSMCCRLQLDLRELLKRGNGLFGSAEQTGSIGVVTINCARLGFQHRGNRSSLFERLDALLAHACDSLEIKRQVIGQYLDAGLFPYSKRYLGTLRNHFSTIGVNGINEMIRNFTADTDDITTPAGHRMACDLLDHIRAKIIGFQEQTGHLYNLEATPAEGTTYRFAKEDLRRYPEILQAGTPDKPYYTNSSQLPVGFTEDPFEALTRQDELQGKYTGGTVLHLYLGEQISSSAACRDLVRRALTRFRLPYLTVTPTFSVCPVHGYLPGAHHHCPRCAAEEPATIPRVCEVWTRVMGYHRPVSSFNIGKQSEFIERRFFVEPRAMCHATA
11521..12228                       anaerobic ribonucleoside-triphosphate reductase activating protein; Acry_3481        N/A                 AcidiphiliumcryptumJF5MPQPDEPLVSGWAPFTTLDFPGRLAATFFLRGCPLRCRYCHNVDLQARRGTSPLRWLEALTWLDQRRGLLDSVVFSGGEPTMDRCLEQMIRDVRSLGFEVALHTAGVSPKRLERVLPMLQWVGLDIKAPFGDYARITGSEASGARARVALAMLRESGVPYEVRTTVHPALLDAQVLQTLALDLRASGIGRWVLQPFCGRGCVEPALSAENISIETSLVTHLRRIIPEIVVRSNGC
12650..13633                       PROPHAGE_Escher_MG1655: predicted transposase; Acry_3482; phage(gi16131356)          2.24e-81            AcidiphiliumcryptumJF5MCAVISGAESWEDMALYGRSKQDWLGTFLALPNGIPSHDTFRRVFMLIDTGRFEACFEAWARSFGTTLDREVVAIDGKASRGSFDRSRDQAAFHVVSAWASDRGLVLGQRQVGDKSNEITAIPELLDVLDIKGAIVTLDAMGCQRAIAANILEGGADYFVTLKANQGKKHSAVAELCATTCFSRSPTHRPVHDEFDDGHGRLVRCRVFVCPDAVALEPLRDWPGLKSVLAVETICGVNGSGKIEAEIRYFLSSSDDQPEILARAIRQHWQIENSLHWVLDVTFNEDHCRIRDRNAVQNFSLLRKIAINLVRRHQSPNLNGSASIGCV
complement(13617..14444)           PROPHAGE_Xantho_33913: IS1480 transposase; Acry_3483; phage(gi21231089)              1.65e-27            AcidiphiliumcryptumJF5MAWTEIARQRYCRAGLRYASDLTDAEWALIEPFMPLPLHRGRPRTVVLRRIVEAIFYMLSTGCQWRQIPKEFAPFTTVQGYFYRFCRDGTFDRINHVLVMQAREIAGREASPTAGVIDSQSVKTTEAGGPRGFDAGKKIKGRKRHIVTDTVGHLVGAVVHHAGIQDRDGAPDVLKSVKSLYPWLRHVFADGGYAGPKLNGRLAKIGKWTIQIVKRSDTASGFELLPRRWVVERTFAWLGRCRRLAKDFEATVTSATAWLFLAHIRLLTRKITRNR
complement(14666..15412)           PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposition protein; Acry_3484; phage(gi557307613)     4.86e-31            AcidiphiliumcryptumJF5MLNHPTLDQIHQLGLAGMARAFTELHANPETPSLSHAEWLGLLLDREITVRRDKRLSTRLRHAKLRHDAAIEDVDYRSARGLDRALFQKLIQGEWIDAHDNLVLSGPTGVGKSWLACALGHKACRDDRSVLYQRAPKLFTELALARAEGRHGRMIRTLGTVNLLILDDFGLAPLDASARHDLLEIVEDRYGRRATIITSQIPPAHWHELIGDPTYADAILDRLLHNAHRIELTGESLRKTRKQTPKTA
15383..15394                       attR                                                                                 N/A                 GATCTGATCGAG
complement(15430..16977)           PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposase; Acry_3485; phage(gi557307612)     3.44e-05            AcidiphiliumcryptumJF5MPVERIAMRDVREIVRLRMAGLSTRQVGIRVGVAASTVRLTLRRLEAAGLDGPGALALSEAALERRLFEGSAGKRPGHRRVDEPDWGRIRRELQRKHVTLSILWDEYIAEHPDGYRYSRFCELYRSWEARLPVTMRQTHASGEKLFVDYAGDTVPVVIDRLTGETRAAQIFVAVLGASSFTYAEATWTQTLPDWIEAHNRTLAAIGGVPALLVPDNARVAIIRACLYDPQVNRTYTDMARHYGTAILPARPRRPRDKAKVEVAVLLAERWLLGKLRNRAFYSLAELNAAIAEFCRWLNEERVVRRLGATRRHLLETLDRPALKELPAEPYVLAQWRRRRVGIDYHVEIEKHFYSVPYRHARAEVEARFTVRTVEIFLRGERIAVHARGSGNGKHTTIAEHMPSSHRRYGDWTIARIHQEAARLGPSVATLCTLILERRPHPEQGFRACIGILRLARSVGADRLDAAAERALTIGTLTYGSVKSILDHRLERAAGTASPDPTPIRHPNIRGGGYFH
17437..18690                       PHAGE_Ralsto_RSA1_NC_009382: transposase IRSO15-like; Acry_3487; phage(gi145708108)     2.04e-16            AcidiphiliumcryptumJF5MASSDIFTLGLGLTPPWRVVDQRLETDYQPHELHLAVAADPGARFPCPTCGRLCKPHDWKELSWRHLNFFQHACIIEARVPRTDCPEHGVLRIAVPWARPDSGFTLLFEQAALALMREMPVAAAARIIGVTDQRLWRILRYYVGRAIERLDLSGVEAIALDETAAKRGHSYVTVFIDLDAAERPVLFVTPGKGKECMTAFRAFLAEHGGEARRIAEVVCDMSAAFLAAAAESFPQASVTVDWFHVVQIFTTAVEQVRRAEAHQHNLPKGVRWATLKRPENLTMAQRQALDQLENSGFATAEAYRAKEMLRWVRLAATPQAARWRLTNFLNHVTARLDDPDHLLDPVRQAVDTVRRNAKRIIRRWKSGHSNARLEALNGLFQAARARARGYRNTATFACIIYLLGAPINAMLDVFHST

#### region 2 ####
34957..35931                       PHAGE_Escher_500465_1_NC_049342: hypothetical protein; Acry_3501; phage(gi100035)     1.12e-42            AcidiphiliumcryptumJF5MKPPKRRNVPATGRLIGYARVSTDTQGADPQLDELRAAGCTIIHEEHASGADRGRPVLMRLLKEIRPGETLVVVRLDRLARSVSHLLAVIEQLETAGAHFRSLRDPIDTTTPQGMFSLQVLGAVAQLERALIAERTRAGLLAARSRGRIGGNPGLRARDPEAIRKIKKSRDAGYLNTVLAQVDAWLPTVRRMRPDQPWGDVVRVLNRGQATPAHHASGRIWTVERLRRTVHRLVAEGLADRTLLGRAPPQRSDDRLVRLVAGIKTAAPGHTLQQIATQLEAMRERTPRGGTRWHPSSVRHLLIRAERLGLLATPIDHTATTLQS
36270..37616                       transposase, IS4 family; Acry_3502                                                   N/A                 AcidiphiliumcryptumJF5MLASVANTPILPGLSPVAGKSIEARFDGEMLSSDGGLLALREVEKRLGIAAQLAACIDDPRTPERVQHGLDEIIRFRMLMIAAGYEDGNDADRLRNDPMFKLAMERLPEAGDLCSQATISRTENLPGPRALLRMGLAMVEHYCASFRTIPNRVVLDIDDTFDAAHGAQQLCLFNAHHDEYGFQPIVVFDGDGRMLAAVLRPACRPKGSQIVKWLRRLIDAIRSHWPRTAIMLRGDSHYCTPEVLRFCRARRLDYIFGVAPTTTLRKHVIALEASTTARAQQAPGEKIRRFKEFNDGAASWDRVERIIARVEAGPMGVDTRFIVTSLKAGSPRTLYQEIYCARGQAENHIKAWKTHLAADRTSCSRASANQMRLFLHIGAYWLMWSLRSLMPRRSRWRGIQFDTLRLRLIKLAVRLETLKRSIRLHLPRSMPDQAILGYALARLPRLVI
complement(38074..38616)           PHAGE_Caulob_magneto_NC_019407: putative ArdC-like antirestriction protein; Acry_3504; phage(gi414088708)     3.55e-12            AcidiphiliumcryptumJF5MPNSRMANAGQTDLQRRSCGIIRITALCPLCRYRHNGHATGHPSRLNRPDLGTPFGSEAYAREELRAEIASLMIADKLGVGHDPGQHAAYVGSWIKALQQDAREIFRAAADAEKISGYLMALRAEQKAGQAAGRSDDAQAGDQARGYWQRAAESGAEIRRAERAEQPEQERQTRRATAGR
complement(38619..39611)           PHAGE_Bacill_Mgbh1_NC_041879: putative phosphoesterase; Acry_3505; phage(gi100037)     1.01e-24            AcidiphiliumcryptumJF5MSAAALPALIQRFFTDRLCVQMEASRNTVAGYRDTFRLLLRYASARHVKPPVKLTIEDIDADLIADFLVHTETARGNSARSRNTRLAAIRSFFRYVAMSDPTWLLQCQRILAMPNKRYVKRTVTFLDSDEIAALLAAPDRTTWAGRRDHALLLLAVQTGLRASELVGLQCGDVVLESGAHIRCMGKGRKERATPLRRETVKLLAAWIGDDKNKSKPLFPSIRGERLSRDALEHLVRKHCLTASLTCPSIGSKRVTPHTLRHSTAMDLLHHGVDPAVIALWLGHENVETTQIYIHADMRLKEKALARVAAPDTPSSRFRPDDQLLAFLEGL
complement(39608..40549)           PHAGE_Bacill_vB_BtS_B83_NC_048762: hypothetical protein; Acry_3506; phage(gi100002)     5.94e-11            AcidiphiliumcryptumJF5MSLTIQLDRYLNVRRSLGYDLGTSERILRRFTRFADREGAAYIDTALFLRWHATLAEACTSTRAARLSVVRLFAQWLSSFDPAHEVPPRGLLPGSVQRSRPHIYSETEIGSIIVAAKELPSIYGLRGLTCSTLFGLIAVTGLRISEALALDRDDLDAEHGVLRVRQGKLGKERLLPLDPSVVTQLIDYLAERDRLIGHPAKPLFVTDKATRLTDCAARYNFARACQQIGLRTHQPYCKHGRGPRIHDLRHSFAVKTMIDWYRTGKDPAREMIRLTTYLGHSDPSNTYWYLEAVPELLDLAMARATADGREAVQ
complement(40546..41757)           PHAGE_Mycoba_Rem711_NC_051725: primase; Acry_3507; phage(gi100047)                   2.02e-11            AcidiphiliumcryptumJF5MSENLETCVDPYLASFGESFAVANYKAATIKSYRSIIRKLGQVMDAEGIEPSALTLNQAERLGRMVPRKHGQTVCPHNLARRFAGHLIDIGVAQPVPLTEARIARAALLANFETYLVKQRGLSQRTIYHTLRFADRFLDHRFGETMVDPGRLRPADAIGFIEHVLAGARRDKTIATHVRIFLQYLFGCGATATNLALSVPKTARRWGARLPRHLSPNGVEAVLASVRDNQRHGARDYAMLLLMARLGLRAAEVIAIQLDDIDWRAGELLVRGKGKLHDRLPITVEVGDALSRYLREERGPATCRTMFVTHRAPHRPFKDGQIVNAILKDALKATGQKPVTPYVGSHLLRHSLATRLVNTGASLDEVGDVLRHRSRSSTMIYARLDIDGLRSIAQPWPAAGGAQ
complement(41817..42542)           PHAGE_Caulob_swift_NC_019411: putative ArdC-like antirestriction protein; Acry_3508; phage(gi414089784)     5.89e-30            AcidiphiliumcryptumJF5MRTWRIPTRPPMAGDYAQTVAASIVKQLEDGTAPWVKPWEPSGLRFIPYNAITGKDYQGGNAIWLMAVAEMKGYSDPRWTTYKQAQSLDAQVMKGEKGTLIQYFKKFDRVPVKDEQGRPVKDAEGNQVYRSVELERPRVFSAVVFNAEQIAGMPKIEARPALAEWERHAAAEHIMSNSGVPIIYRPGDRAFYTLAQDRVTMPERDQFKAADRFYSTALHELGHNAVIRIMPRAVEKARLAA
43114..44712                       Integrase, catalytic region; Acry_3509                                               N/A                 AcidiphiliumcryptumJF5MPPQPGGVLARAPPWSRPSGPRRIPPHNGETFVPGRHINDHQKRLFMRYRQTDGVALAAARAGFSTAAGYRLEQERHLPSSPKPPRGRRRPDPLATIFDAEVVPLLEAAPGLRAVAIFEEMCRRHPDLAPGVRRTLERRIRTWRALHGPEQEVIFRQTHEPGAMGLSDFTDMNELGIIVAGAPLNHRLYHFRLVWSGFEHAHVILGGESYVALAEGLQNALWLLGGAPREHRSDSLSAAFRNLTAENVADLTRRYDALCAHYGMTPSRNNRGVAHENGAIESPHGHLKRAVRDALLLRGSTVFVDLEAYRRFIAEIVGRQNRHHAERIDAERAALQKLPDQRTADYEETVVTVTSSGGFTLRKVFYTVPSRLIGQRLRARLYDNRLELFLAATPLMTLPRGRPQPDGRHGHVVDYRHVIHSLRRKPMALLNLVYRHQLFPRDAYRRTFEHLLEQTPPRDACRIMVELLAIAHERACEAELASVLAADIKAGRQPDLKAIRQRFAPDPASLPALTIPTMPLASYDILLQGAAA
44709..45584                       PHAGE_Escher_520873_NC_049344: primase; Acry_3510; phage(gi100047)                   1.98e-33            AcidiphiliumcryptumJF5MSETARTVDAQRLTLLLNELRLPAIKQVWSDFAARADKEAWPAARLLATLAEHEVAERDRRRIERHLLEARLPPGKTIATFAFEAVPMISKAQILALCSGDGWLETGANLLAFGPPGGGKSHLAAAIGLALVENGWRVLFTRTSDLVQKLQIARRELALEATIAKLDKFHLLILDDLAYVTKDQAETSVLFELISARYERRSLMITANQPFGEWGKVFPDPAMTLAAVDRLVHHATIFEMNVESYRRKTAIQRRAGPGRPPTRATINENIRLSLHDNQVAETRLPASNQSD
complement(45805..46215)           PilT protein domain protein; Acry_3511                                               N/A                 AcidiphiliumcryptumJF5MIFIDASALIAMIAGEEDADMLADLLAQERTRLVSPVAMWEATAGLCRSFGLSMDGARQKVKSFMSALGIEVISLGEREYDLAIQAYADFGKGRHPAALNMGDCFAYGAAKSYRAALLFKGDDFSKTDIRRAEMNL
complement(46212..46454)           Rv0623 family protein transcription factor; Acry_3512                                N/A                 AcidiphiliumcryptumJF5MPLYIRDNATAELVAKLAKERGLTKQDAVRLAVQAELDRTREAKPLRERLREWREANPLPPPTGLKADKAFFDDLSGEGE
complement(46521..47201)           NERD domain protein; Acry_3513                                                       N/A                 AcidiphiliumcryptumJF5MVATGAAAAAIITRPTDQATETHAQRAGAAGEKRVARALERAGVPAIHDITLQDRRGTHQIDHVAAAGDCLYCLETKTWRGELMGHAHAQQWTLKKPDGAAQRVYNPLLQNETHRDVIRRVTQVPVRPLVILAGHVQLAGEPVPGMISLTSAIMEMTRAGAASGRALAALEALERFRGQSRQAVLSAAHRRRMRRHKPACTRQLWILAVGAALVFFVLAGEQAILW
complement(47274..47615)           hypothetical protein; Acry_3514                                                      N/A                 AcidiphiliumcryptumJF5MSRKPSLLASALKSSEPETLPAPRQPSAEPKAAVVSPPLPQKVEPQGGSYVPPSRANKTAKTHHLPPAYWETLEEISFRTRDEKGKRVPQERLVAEALNLLFVKYNYPQVRDE
complement(47612..48271)           PHAGE_Halomo_phiHAP_1_NC_010342: ParA-like protein; Acry_3515; phage(gi167832378)     2.95e-18            AcidiphiliumcryptumJF5MLAVAFCTQKGGTGKTTIATALAVAAHRAGKKSALLDLDPQTNAVDWFDRRQGDGPDVASIQPGAIRRSLDAYRKLGMEWVFIDTPGKMDSASTEAAKHADLVLIPTQAQIFAIDTLEPLKRLLVMAGNPPAFVVLNQVHPNAAGRAGEDAAAIAERFKVPVAPIHMSRLKAYEDAPALGQSPQEYEPKGRAAREIAELFAFLTEQGSMITGKHESMKL
48491..48832                       PHAGE_Entero_N15_NC_001901: gp49; Acry_3516; phage(gi9630516)                        3.71e-08            AcidiphiliumcryptumJF5MPERSKLIEFRGGALDDLRDFPISARREAGHQLDQVQQGHDPDDWKPMRTIGQGVREIRIRDEAGAFRVIYVTKFADTIYVLHCFQKKTQATSKPDLELATKRYRDLVKELSS
48829..49110                       PHAGE_Rhodoc_Weasels2_NC_041887: pore-forming tail tip protein; Acry_3517; phage(gi100139)     6.13e-10            AcidiphiliumcryptumJF5MSNERFTSVWDAIEDTPAEAENMKLRSALIMALKERITREGLSQSQAAKLFGVTQPRISDLLRGKINLFGLDTLVNMAVAAGLHVELRVLEAA
complement(49198..50559)           PHAGE_Rhizob_RHEph10_NC_034248: hypothetical protein; Acry_3518; phage(gi100039)     6.71e-16            AcidiphiliumcryptumJF5MPVSAPTGRVSPIPVGVSMQLPHQAERGHVPPSLPARPTGLRRLTPAMLPTGRLADEFAGGDVTPGQALAAFKAAAPFLGIGPRAAQAIDWLFRFTQPQDWQPGARPIVWPSAAMMAAELGITETQTKRLNRHLAELGVVTMRDSPNGKRYGHRDRSGRIIEAYGFDLSPIAQRIEEFRALAEAGREERAAVAKLRRRASIARASLRQTWETFREQEIDLPAPLRTAAQAASRGLKALDSSQRLKPAVEALEAIAVDARRALEMALAGASREQTSISESVEMCPKGHADVPHITTTNQILYPNKDTVIALKECSRGDLPGRTAQTKPPARQERQERQDRGSSLKLTPDELVRLAPRLVPYLRHPSPSWPEIVDAADWLRHDLGVSKPLWGEACLAMGREQAAIALALVSAKPPGHFRSSPGGYFHGMVERARDGGLHLDRTIWGLRGASAHKK
