gi|00000000|ref||  Clostridium botulinum A str. Hall, complete genome. [asmbl_id: NC_000000].3760560, gc%: 28.18%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(3084526..3085611)       PHAGE_Clostr_phiCT19406A_NC_030950: recombination endonuclease subunit; CLC_2920; phage(gi100058)     7.18e-180           MSEFFNVTLDKDIILDDSVISNKTGWSSEKIQKEIIDKRITKFEELEDVDVTNKKNKQLVAYSEETGKFTTIDGIDAGEIVGAGMKQISKMGIVGSAETPRIVNIPVNTVDFKVPRVNVLRYDTENTQDLISVKNEFTNDESNDFIDDRMMTFDGKAHLETNHISDFEVVQDTESFTEYSVNVDKTLFKKIEGFETFEDGVIQKLKTKAIPFDRLLIPKGDMNLSNVDHIDYFRLTANGNNIRIVCSVDSGNTWKTFSGEKWVNVNLTVDDVRKSGMNIATFNAINDVFWNELITTKKIRFAYLFSMDSITDIEEIDKLDLQYDGVGRWKQVKEDLYEVIYASNTLLQVECKFSGNIKINY
complement(3085623..3086621)       PHAGE_Bacill_AR9_NC_031039: prohead core protein protease; CLC_2921; phage(gi100061)     9.47e-70            MKLIQVKNGLLEAENFFLASSFADFAGESNITRDIKTGKLKLISNNKIERKFNYKEFVIEVEKENFNDIKDMDYSMLYLGNSDHIFGIKDLKSNEQNRYWKILKKDNYIQAYSSNDGKNYTNMGGMEFAEPLTKQGFMKYSDEDFILNNYKVYANPYVTIQNFPENTLCELYDLDNNLIKTRLFNSDMECKVFIDSKISGYFTFKDRDGKVIYTSDALQLQYGDMWVFSPYNFEIIYHGNVVTNVSPAMLQDLEELITIKNIGDKDYNNIKIGTETPSNDLIQLSFDGINYADSLTIDSIKQRESKGIYVKITKNAENHNFAVRDFHLVISE
complement(3086633..3086887)       PHAGE_Clostr_phiCT19406A_NC_030950: recombination endonuclease subunit; CLC_2922; phage(gi100056)     9.87e-47            MLTSTIDFKKTRQKMWGILKNKTLAQLPYGHETDKNGSEITSYATNCYEDALEEAHTLLANGIGTKDIQIVEFVPYDYIMQPRV
complement(3086893..3088788)       PHAGE_Clostr_phiCT19406A_NC_030950: hypothetical protein; CLC_2923; phage(gi100055)     0.0                 MPLHKIPLCSFEYVGDNAFSSGTFIYDTTEKVVKTTEKLFYKETMGEIDKIKGDKLFYKEPKDNIEKEKNKYISKKITDIKKEFEKELELRNKEVNKNNTISLDKIKYISINRITSKELDVRKNTDISICYNNKLLVREILQLNKANNLINLSIDRENLQLNKFKSIYTDLIVEKEIFKGESLQNLKLEKYINIEKNIGYYLYRIYCKEIDIDKLKFAEKHGFKNINKNKYRFIDRSNLKEVAKISNKTMLNKDIIIGIDIDTSINNLKILDLKDIDRNYKTMLMYNIALKDIEKYRIKNALNKIAHKEICKDHNKKYFYKDVFKFIDKSINGYLYRQAIRSIFKYNNRYLDREYTTNIFKHNEKYLDNSPIINIYKQIERDLLNLSIWQIYRQSNKYLNNGAIRQIYTPNKNKFIEMTKRWWWLKPTNPTDRLIVPNKDYIYNNDLLNNLDYEYLRFNNHPIEWGKDWGVDYNIPPMTISIEIMLDLINILIMIWHKNTQAWLNCTGKESIQFIMELIYDWYTLDTSSPNADYIRAYRWIRWEAEKVYFLNTENGLQAIGLLIANLIDYLKQHHFNLVPIWHNPKAMDIERKFNKVATNGDIMKDLDKLKGKRNYMIETQNFEKKNIFGR
complement(3088803..3090041)       PHAGE_Clostr_phiCT19406A_NC_030950: RNA polymerase binding protein; CLC_2924; phage(gi100054)     0.0                 MATDNFYFVEGNTSVKNLVKTLAAEITQNSGIYKWDLVYPDSINKIGSAGEGSTINLIKDNSKTDKVDTVFTVGSQNDKCIIKATTTYGKEFYVKIDREEADLTKEEKKALIDFNKLHTYYNGNGDSFSRTDAQVLEMMAGVSDRWSKSGDYDVYVSAMTKSNSINNIKLQISDKLNADKTDLGISKNIQAEYNYRLAWYRKLQPEIKDFLPVQYWINVTKDSINLVLCGDPSADVHPYENYLTSYAYIGALKPVEDSAYTDDKYNFGITVSSDIEPNYSKVYGERTATGVTDVCMIANKIGMPYQPHYPAFYATNPFMDKCNVEGSRYNHKKHQFSDITLVHPVDMERGKMINVLVGDASAINDTDRLAYKKDTEEEEYYKKFKITAPYCFLNNSANINYCVAIRCYKTTK
complement(3090064..3091044)       PHAGE_Clostr_phiCT19406A_NC_030950: sliding clamp; CLC_2925; phage(gi100053)         3.47e-131           MSLPKYIINFEELTEDLKNHLLSLIDDNIRTNYPEINTNNIQDLLQQLKNLLPSVQYEGLKKKIDAFIYRKIEGIQKVKGILLDIPAIQNDYKEQFKFDKDVYITGLHFNQTGWKKEDKYSLEINKIKIIDNVTTKEIGEHKYFNTFYKVNANTPISFVFHNLSGNSRQIIVDLEYIDGEDSSITVEPPPGIEDIDNEWDIAVVMNWEENTDADIDLHGKIDDKKVWYGNKSYDGFYLNFDYTSHKTNKNPEIISVKGYKNKKLLISIKNFNGVELKEPVTLEIYQYRPYGNKLLKKFNVNLDTNRDLKDIFIMDLNTLKITNLNK
complement(3091046..3092386)       PHAGE_Clostr_phiCT19406A_NC_030950: hypothetical protein; CLC_2926; phage(gi100052)     1.94e-93            MGLPSYVVNFDELSDLIKDYLQNGVKVDIGNINFSTKDMENLLSEIKDKIQGVDYNDLINALNALGVKLDNLSGNLGISGTQKIYGKMLEIPAVKGQHIIEFKGNGQITGITYSQSSWRFEDSWDLQVGNDKLFESVRTKEYGEHKFLNVFYPINGTVKFIYNNISGTSKVLWVDFNILENSNLPTPTIPTTSEKNYRFLAIGESEYTLQGANNLMGCTYDADNISNLFKEHKESAKFTKNIVAKNKTKSEALNLIKNTFQDAQDNDISYLFWSGHGTVYEDKFALVAKDNIITVYELQTILDDIKGTKVIFIDTCHSGLAIDKNFAYTLAVVEEKLRSIDKTLNKQGYKVLTASAGSETSGDLSAGYNGNPNPSGAFTWALTQSIKTKKSDKDKNRIVTLEELYQSVLHFYDEFNIKNPYLKITQTAQVYPRNDTSSIFEYKEGA
complement(3092401..3092742)       PHAGE_Clostr_phiCT19406A_NC_030950: hypothetical protein; CLC_2927; phage(gi100051)     3.62e-40            MAHMGYKNFREPVVYILNQELRKRNFKNQINTNEDSKYAGELPEYPCRIIRDSNNKAYKFIYASGTDMQWQEELIRNAEGKVYRIKTTYPNNTNKTIQLIKDNHGKLETIDYV
complement(3092755..3093840)       PHAGE_Clostr_phiCT19406A_NC_030950: hypothetical protein; CLC_2928; phage(gi100050)     3.00e-49            MAKCKVEFYKKNGYQAFENGDANKITLEHCLVSVKINRTLTTPTAEATVTAQYENLPTAIFAGGTQGVIDNFAQIKIYIEDVLQFTGVIKKYDYNTLDKTIEITCHDMYYRMLNLCDKELKFYNKTAADIISTVVSDAKCSFQRGGGNNYTVPKLECEIGTMYNDIISNLVETMYARIRANKNGTIILEEQYPAYNESNHEANHHDYVLSVDTNLSSETASRDSSLMRNILKICCNDKYSIFESKAMTSYLNGERWVDIIDNPLASTPLLKQKVAGYKFLDMWRESTALNVVPVTGIPNIDLGQVVKLVNNQRGNGWYLIVGISTEINADTYVDTLQLQGMRDKTKVYDQCIQIGSGRLKQ
complement(3093827..3094261)       hypothetical protein; CLC_2929                                                       N/A                 MDLNRIKDFKVDLLYEDRKNTGGVITNYKPPRPAYFRKGIRTVQGYTYFEKSVKSDCIIEFTVAFNIKGENDEETQSNITKFLDFRKSYSGRFIFVDEFGIQYKGYLQNKFEIDTPIEGDIYYINLELLCNHEASGWVKDNGKM
complement(3094274..3095815)       PHAGE_Strept_SV1_NC_018848: putative tail tape measure protein; CLC_2930; phage(gi410491736)     4.68e-17            MAVNVGEAVAHLTLDTSEFKKALNGAGKDLEIFVHKVEKEKTRIEKLQEALAKEAGTLSKIGKSMEKPSAAAQNLLKTGMKNTLAEETKSKNPKKGPANIAKGNYDKIQKDIQASIKKVQDSFAQLQTSIVKQLIPIFNNQLVPILNNKLIPIFTKLANKAVELMNSFNKLPNPVKNAIAIIIVSIAGVAKTFTVLSKLVGTINNVIGIFGKLKKAGGIFGLLKTIITSKTLLILVAIAAIGLIVYEVIKHWDTLKKYATRFGNFIANIFKGIGRVINSIIQGAIHAFQGFIRILQWVGGMVHNIINGCIAIFRGVGTILHGIVQGWINIFRGLGNLAGALFNIGRNIVEGLINGIRAMFGRVGQVIGNLASEISSRFKKMLGINSPSRVFADYGNFIGEGLIQGIDNQESAINNKFKGIANKIKGLGNVRPNFNGLNNMSLSGAYGGTYASPYGPNNMNKSMGLTQDIKMYVTIPNADKEGANKIANEFKQMTESSMKNVMTGLFMNDVLRD
complement(3095891..3096058)       PHAGE_Clostr_phiCT19406A_NC_030950: hypothetical protein; CLC_2931; phage(gi100047)     2.44e-21            MTNDYEAFCFDEACVYILNEISKEDAREPKFIDGDRINKANNEDVIQWLNANNRK
complement(3096093..3096509)       PHAGE_Clostr_phiCT19406A_NC_030950: hypothetical protein; CLC_2932; phage(gi100046)     1.80e-61            MDLKVTNIEDLKKAAQDEVIQLPQFSQGIPFNARVKRVSLLNLVRKGVVPNKLLSAAEELFYGKQSSKENVDLAQMTDVMYIMAENALVEPSIEDLKSVGLELTDEQIVALFNYTQEGVSELDSFREESENTECNINK
complement(3096525..3097412)       PHAGE_Clostr_phiCT19406A_NC_030950: hypothetical protein; CLC_2933; phage(gi100045)     3.48e-156           MTSGKTLVNVVKVNFIDEVTNTKHTIETSNEIDIEPINSKGKRDILRIKNKIYGINETDDIVIGYKLKMKDNLFNIETMALIDGGTIQDNKYCGTEVGIAVERHPFTMEIFTEEKDYSRTTGYVKFVYKHCKGKPAKYKIQDGKFLVSSYEAESIPFRNEKPVEIEFLNKLQENNNGEKPGESTPIEDIGVEGGEVENKNPDVGVSITNRVVWSFSNKINQDDVNLENFIIKRKSDNSRVNGNVTIDDTKKIVTFVPDSLAIDTVYIAEAKEINKLDGSGKTTALSTEFKTIKIR
complement(3097417..3097836)       PHAGE_Clostr_phiCT19406A_NC_030950: hypothetical protein; CLC_2934; phage(gi100044)     4.54e-74            MSKFNYKVPGDCIQQDIINNVIPETLWQNVYLYLKKLGYNVYAPGQKRNKCTESYVVIKENGVHALVGNISGYKLFDIIVYSPMDQYSTIEFYVENIKEALKKIEDLRPTGNETPSVIDYDVQAYTTSIEYQQFKSLRR
complement(3097842..3098189)       PHAGE_Clostr_phiCT19406A_NC_030950: hypothetical protein; CLC_2935; phage(gi100043)     1.33e-45            MREFEVNIDSVIDGLSEFEMQSKTAISGYADIAAKKLEEDAKKNAPWKDQLDMDIETIKGGKQWKGDRCNIYITGNEDYYPSLELCNDKKYAILKPTIDKLSPQILKGMSNLFGK
complement(3098194..3098559)       PHAGE_Clostr_phiCT19406A_NC_030950: hypothetical protein; CLC_2936; phage(gi100042)     4.65e-42            MNNINRAKISKNIYEHLEKKDLLREIKILRIGKNAFEEKLDEVYVCTIRGYYYRNNSNIITTSMEGLEFNNLYNDKLLIIYNDISSKIQKDDYFILDGTKYEIVDTGNIQNLVFDMILNRV
complement(3098559..3098843)       PHAGE_Clostr_phiCT19406A_NC_030950: hypothetical protein; CLC_2937; phage(gi100041)     2.95e-35            MRTPLEILKFNLQEKQYPYFEDKELELLLEINNNDVEKASYKGCILKAIADDGIEVADIKLQSNRAYWLTLAEHFKEEQKILKNQTSMERVDEH
complement(3099530..3100051)       PHAGE_Clostr_phiCT453B_NC_029004: hypothetical protein; CLC_2938; phage(gi100025)     2.07e-47            MLDKKLYIKTEERLYRHFRSKKELNKLKNRAKHLSNRIEIIMDKIKNNDVTLEEESRSRTYDEIVQTSSNGTGYAEKELIRQIERLEIELGEKIKKKGKVEYKIREIEEEISVMEDNISSLNEENKKFIELKYGENKSVDWIAVEMFGRARSTAYRKKNELVEHVAQLNNLIV
complement(3100224..3100475)       conserved domain protein; CLC_2939                                                   N/A                 MSIVLVKEIENKYFEEIESFRKENVVLKILLKEYVKKSIDYEKLLKESINLLDKYQEELEFLRVAKNRWTDEVVKHYFTIKDF
complement(3100532..3101332)       PHAGE_Bacill_PfEFR_5_NC_031055: hypothetical protein; CLC_2940; phage(gi100039)      7.76e-47            MDYNITGENERVEICSVCGEAIEKITYIPGLNRYIKGPVMCKCKREALMAKEKEKINKEKQLRLKKIIKNSLIDEKFRNSKFKNWDFTKGNDKMYKIANKYTKKFENMKKESVGLLLYGSPGNGKTYTVACIANFLIEKMLPVICVNADSLLNRIKDTYKKSGKEVEEDILRGLDNADLLIIDDLGTEQDTEWTRTKIYNILDSRYRNGLPLIITTNLSLIELKNRYEKRTYYRILEMCTPILNDGKNIREEKAKEKTEILKELLK
complement(3102320..3102532)       PHAGE_Clostr_vB_CpeS_CP51_NC_021325: putative helix-turn-helix domain protein; CLC_2942; phage(gi509140071)     1.45e-05            MAVIKTKEYRRIRNLSISKLSYKSKIARSYITELEEGKYENPGLKVICNLCKILKITPNELIDQELWRWW
complement(3102594..3102803)       PHAGE_Bacill_phiCM3_NC_023599: transcriptional regulator; CLC_2943; phage(gi589892743)     6.64e-10            MTTAKKLKAYRCLRGAKQEDIARLIGVSLNTYNFKENGKKSFTLNEAKIISDFFDTTIDELFFKRNGQL
3102995..3103405                   PHAGE_Clostr_phiCD119_NC_007917: RepR; putative repressor; CLC_2944; phage(gi90592681)     1.09e-15            MAEIKDRLKCERLRKDLNQTELAKFLNVSKQTVSNWENGNRIPDTLTLSKLADFFNCSVDYILGRSENRNGIISKANIDGSNYEFELDKSIFPNGITREQMINYIKELEDRNKELEKEAEISRKLKEAGFDFNPDK
3103707..3103856                   hypothetical protein; CLC_2945                                                       N/A                 MFNFSGVLSIKKEGEIIYEKKDTFTLNRKKTSCEKSSKDKIQLVQKVNT
complement(3104419..3104507)       tRNA                                                                                 N/A                 TGCCGGAGTGGTGGAATTGGCAGACGCAACGGATTCAAAATCCGTCGAGGGTAACTTCGTGCGGGTTCGACTCCCGCCTTCGGCACCAT
3104937..3106424                   PHAGE_Pseudo_JBD44_NC_030929: hypothetical protein; CLC_2948; phage(gi100041)        2.29e-80            MLFNSMHFLLFFPIVTFIYFFIPHKFRYIWLLITSYYFYMSWNPKYALLIGISTIITYLSGILIEKSNKITDKQKSKFFKKLWVFLSLFINLSILFLFKYCNFFTYTLTKIFSLINITIKVPSFDFILPVGISFYTFQALSYTIDVYRGNIKFEKNLGKYALFVSFFPQLVAGPIEKSKDLLNQFNEKHIFDYNRVKNGLVLMLWGFFQKVFISDRLAILVDTVFNNPSNYKGLEIIVASVFFAIQIYCDFSSYSNIARGAAEVMGFDLSLNFKQPYFSKSIQEFWRRWHITLGAWFKDYLYIPLGGNKCSKWRRYFNNMVVFLISGLWHGAAINFIIWGGLHGFYIIIGDMLKPLKEKIINNLKIKTNVFSFKLFQTLFTFILVDFSWIFFRANSFSEAKLLIKNMFYFNPWIFTSGSIYKLGLDQKDFKMSILGILIVFIIDNIARNKDVRVELSNQNIVFRWAIYLSAICFILILGIYGAGYDANQFIYFQF
