gi|00000000|ref|CP000766.3|  Rickettsia rickettsii str. Iowa, complete genome. 1268201, gc%: 32.45%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

#### region 1 ####
1084789..1085877                   PROPHAGE_Escher_MG1655: DNA strand exchange and recombination protein with protease and nuclease activity; RrIowa_1391; phage(gi16130606)     3.47e-160           RickettsiarickettsiistrIowaMIFLSQAYILIGKFIIWKFMSNTDKERAIAAALAQIEKSYGKGSVMKLGQRPHVDIEAVSTGSLGLDIALGIGGVPKGRIIEIFGPESSGKTTLTLHLIAEAQKKGGTCAFIDAEHALDPAYAKKLGVNIDELIISQPDTGEQALEIADTLIRSSGIDMIIIDSVAALVPKSEIEGEMGDAQMASQARLMSQALRKLTASINRTNCITVFINQIRMKIGVMFGSPETTTGGNALKFYASVRIDIRRIGSIKDKEEVIGSQTKVKVVKNKVAPPFKTADFDIMYGSGISKEGEIIDLGVKLDIVEKSGSWFSYKNVRIGQGRENVKQYLKEHPQISNEIEKIIREKSSKITNINLDQTEEEND
1085870..1086595                   PHAGE_Prochl_P_TIM68_NC_028955: hypothetical protein; RrIowa_1392; phage(gi971760361)     7.55e-14            RickettsiarickettsiistrIowaMIDLTGKTSLITGASGGIGGAIARLLHKLGSHVIISGSNEEKLKSLGKVVKDNYTIEVCNLADKEECSNLISKASKLDILVCNAGITSDTLAIRMKDEDFDKVIDINLKANFILNREAIKKMIQNRYGRIINISSIVGISGNPGQANYCASKAGLIGMTKSLSYEVATRGITVNTVAPGFIKSDMTDKLNEKQREAIVQKIPLGTYGMPEDVANAVAFLASDQASYITGQTIHVNGGMLMV
1086759..1087019                   PHAGE_Yersin_fHe_Yen9_04_NC_042116: portal protein; RrIowa_1393; phage(gi100153)     2.91e-07            RickettsiarickettsiistrIowaMEFKIMSTTDKIEQKVIEMVAEKLNKDKSIITTDSRFIEDLKADSLDTVELMMAIEVEYGIDIPDDEATKIKTVSDVIQYIKERQS
1087053..1088339                   PHAGE_Escher_500465_2_NC_049343: DNA adenine methyltransferase; RrIowa_1394; phage(gi100041)     4.53e-74            RickettsiarickettsiistrIowaMSNQRVNKRVVITGLGLVTPVGLNVNSSWKNIVDGVSGIKTITEFDTSKLACKIAGLIDNSEKDGFKLENFTQADDINRLSKMDKFIHYGVAAATEAVEDSGWLPDDEKSRDRTGLILGSGIGGLKMIEDTSIKLYQENNGKVSPFFIPASLINLLSGLVSIKYGFSGPNQTAVTACSTGAHAIGDAMRMIKHGYADVMIAGGAEAPVTPVGVAGFVAARALCTKYNDNPKKASRPWDKDRSGFVMGEGAGVVVLEEYEHALNRGAKVYGEVIGYGSTGDAYHMTAPHPEGRGAYRAMRDAMLDATITPDMIDYINAHGTSTTLGDGIELAAVQKLFLEANPKVLMSSTKSSIGHLLGAAGSVEFIFSALAIRDQIAPPTLNLDTPMDEVNIDLVALKAKKTKIDYVLSNSFGFGGTNASLVIKSILV
1088621..1090402                   PHAGE_Bacill_G_NC_023719: gp245; RrIowa_1395; phage(gi593777701)                     7.68e-15            RickettsiarickettsiistrIowaMTPIYYIKDGNLSFADKVILSDLELYLYTGDKICLIGRNGCGKSSLMKVISGDYELDNGALFQDPLVTTGYLRQDIPIKTHLTVYDFVLQQTDSTKEIDKYQIDIILEKLQINGTDNLSTYSGGQLSRASLAKALILEPEILLLDEPTNHLDIATIEWLEEFVKSYKGAIICVSHDRTFLSNVTNKIWWLDRGILRKSDKGFKFFDEWQTIIIDQEEAALRKLNKKLSQENEWLNAGVTARRKRNQKRLADLKALRAITQEQTAKLASSTQRVRAELAENIAKSKFIIEADNITFSYKNTKIIDNFSFRVKNGEKIGIIGANGSGKSTFIKLLTKQLTPESGKIIYGGNLDISYFDQHREKLEPNHTLQQTLCPTGGDQVFLPHGKTMHVAGYLKQFMFNPKLLNAKTAILSGGEANRLLLAKILMNPGNLLILDEPTNDLDMDSLEILLDILTDYSGTLIVVSHDRDFLERLVTRTLVFAQGKIHDLTGGYEDYKQYFTTSPIAKKASKPLPLTAQKEPLNKKLSYKYQRLLETLPNYIEKLEISIKHLEKELEDVNLYLDNPQKYNSITSQLINDQNKLDELLNQWLEIQD
1090470..1091549                   hypothetical protein; RrIowa_1396                                                    N/A                 RickettsiarickettsiistrIowaMMSISDITATLKYKFDNLKEHLNNAYSRSQIEIILGALSSLQSEAASYGLNFDISNLKETAETKLKHYEVEQSIEKARVQEEEFLKSQRARKLAEEEKEIAQRVAALNNLHNEFIKNITKDTKRIAESNKRLDKIINKLEKENIIDHEELNREILTHEEIFKLNQAYKVLHKNHKKITEEHKQAHTELNELNKTITNLSQQLQEKGLAPKKVNELKGELEFHQEMLKIHKAYVEKIENSKKILDQEIIKHEKEHNINKDKIKKLGSDIKERYKKEPEKYLDAYEKYLVLKHQHKAIKTDGVVKDIEHHNKVLNKINVGKTKSLANKIREQTQVKDTNTGSLSPTRTPNIKVTNNKTRGI
1091567..1091797                   hypothetical protein; RrIowa_1397                                                    N/A                 RickettsiarickettsiistrIowaMSKFKNLTPEQKKAALEAAKVQFEEQQQKHNAIFKEAMQASSQVHQYNQDLGNCVDNTSKDIKLAGKASKGVCEII
complement(1091825..1092979)       hypothetical ATPase; RrIowa_1398                                                     N/A                 RickettsiarickettsiistrIowaMFRKQFLSSIIKHFKTHKVCALLGPRQCGKTTLSKQFVEAYNIPKINIFDLENPLDLARLNEPMLALSDLQGFVIIDEIQYKPNLFPILRVLVDTTDIKFLVLGSASRDLIKQGSETLAGRIGYIEMTPFTLSEVSGTQQLWIRGGFPLSYLADDEELSALWRQNYIKTFLERDIPNLGFTIPSLQLRRFWLMLCHYHANILNASELGNSLSISYHTAKHYLDILEGTFMIRILQPWYENLKKRQVKTPKIFFRDSGIYHALLGLNNYEALSTHPKIGASWEGFALEQIVRYYKAEPEECYFWSSHNGAEIDLLIFKNGKRLGFEIKYTNTPSITKSMQISLEDLKLDQINVIFPGEISFKLSEKIQAIGLSSLIQNDTKAATI
complement(1093049..1093738)       PHAGE_Liberi_SC1_NC_019549: guanylate kinase; RrIowa_1399; phage(gi423262505)        1.59e-15            RickettsiarickettsiistrIowaMTTKNKRVLQKCAYREEFKGDMERSTAVTSKLPLEVELSRNSKGLIIILSSPSGTGKSSLAKALLKIDNNLRLSISATTRKPRLGEVEGINYYFKTGLEFEELVKQNKFLEYAKIYDNYYGTPKEYVEMLLNQGLDVLFDIDWQGARSIKENATNVVAIFVLPPNIEVLEQRLRNRATDNEEAIKLRMQSAQNEISHANEYDYVVTNDDFDRTLKKIHAIIVAARDKAF
