gi|00000000|ref|CP000833.1|  Dinoroseobacter shibae DFL 12 plasmid pDSHI03, complete sequence. 126304, gc%: 60.53%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
68871..68882                       attL                                                                                 N/A                 GAGACCGCGCAA
complement(81749..83731)           PHAGE_Gordon_Schwabeltier_NC_031255: recombination endonuclease subunit; Dshi_4015; phage(gi100054)     9.80e-10            DinoroseobactershibaeDFL12DSM16493MTASFAPLTVAIGDLVAHPANVRSNAPETYDPENIAHLKASIAVLGLLQPLLVQKLDGKYAVLAGGRRHAALKELIADKATKGFTAKTKVDCRLVPEDCDVTTALSLAENITQAPMNAIDEFEAFARMMEVDGQTPETIAKTFGTTVAAVKRRLRYGLIHPDIRAAARAKTITLDTMKAFAEHPSQEVQREVYEALTKEDSYLQAYTVRQALKSRGVQVSDDIGAFVREVYEARGGAIAADLLDEHSVLEDAALVETILLEKLRAAAEEARIKLGFAWADAMVRYDYATMADYGRVYPGPIEPDEAAQKRVDEITAELEKLQLEMEDEGLEDDAYNALYERVDALEDEARDLQEAYSAEDLARAGVIASWSNGQVTLHIGLVRPEDTVKEEGARRSSTNTTGEEAPDAGEITYPASLAEDLKTERAMALGAAMALHPEAALDLTLFKLVSDVLASGMSVTQAIKIEARKEYRSHAKMDEIDETSLEQVAAAHDVLDLSWLDDARSPADQFAAFRALKPGEKAKLVAYATASTTQSCFARDRQRDSLMHDFEIEVMPDIRAHWTPNATLFNRFKKAWLLKILGEDLGLAQEAVTLASSSKKEIVAFCDKLFAEPFATLTDAQRAAVASWCPPMMQTAGVAFDEAEPAAEIPEPDGEVAQAA
complement(83888..84277)           PHAGE_Rhizob_RHEph10_NC_034248: hypothetical protein; Dshi_4016; phage(gi100109)     2.31e-11            DinoroseobactershibaeDFL12DSM16493MSMIVQPQPDSPDPSVIAAQNDAFRKLACLGVAPAQPTQGRMHVTRSLMEAGDGFMAEAVKATGAFDTFEPENDPEGWHDFGAVEIRGETVFWKIDLYEADSDFRYGAETPDNPATTMRVLTIMLARDW
complement(84365..84574)           hypothetical protein; Dshi_4017                                                      N/A                 DinoroseobactershibaeDFL12DSM16493MSRKEPKTLRVACFNDGRRKIISFKRGAYWWSASEGAYPLSAALESITDQGGWIETIPNPNYRPKGLFG
complement(84598..85536)           PHAGE_Caulob_phiCbK_NC_019405: putative ArdC-like antirestriction protein; Dshi_4018; phage(gi414087906)     5.03e-58            DinoroseobactershibaeDFL12DSM16493MARSRTPKFDASEVITNEIIRIIERGVLPWRKPWTAGGSSRPLRVGGEPYQGVNNFLLTMRTVMAGHSSPFWMTLPQANALDAKVRKGEKSSVVVYYGQSRKDAGGEDDRSDGDDHSEEARIFRFQKSYRVFNACQIEGLPDSFFPDPEPVPEHPPSEPIPHMQAFFDAIDITTVFTGTEAYYLPPVDKVYMPSITRFENPRNFYGVWAHELAHATKAPHRLNRDFGLSKFGNTSYAREEIVAELTSVFLGQTLGFTAHTLEMNAAYLHNWLRVLRSDKGAIFKHAADAQRACDYLIARSEAGRAGRSAEAA
complement(85577..86062)           hypothetical protein; Dshi_4019                                                      N/A                 DinoroseobactershibaeDFL12DSM16493MKGIPMQSGVLRVLRATAASWWRHRELRRTGQSARARQLERETVLRDLGYLRQAATLPNAHVICGDGGTFLHLGWTTVSTFAPIERFPLAALAVALGTPFIDIRPVTDGIGFANLPRVTRGRSVDADHSGAGQSVSLTTYIDMVERLGARIVNDPRPRQST
86341..87543                       PHAGE_Strept_315.2_NC_004585: hypothetical protein; Dshi_4020; phage(gi28876205)     2.52e-05            DinoroseobactershibaeDFL12DSM16493MLETPARIEPCFFEEHIPTELADLSVDIQRETTGLGQGLHPDSAAELADLVRVMNCYYSNLIEGHNTRPRDIERALAGAELEEETRPLALEARAHVIVQRAIDEMHRKGTLPRPTSVEFLTWVHKSFYDEMPEEFRVIEHPDGTQEPIVPGRMRQDDDREVAVGRHLPPSSSRVAAFMDHFDKRFQIAARSSSGRIIAIASAHHRLNYIHPFPDGNGRVSRLMSHAMALTAGIGGQGLWSVSRGLARGLTDRGEYKRMMDLADSPRRGDRDGRGNLSEAALKTFSEWFLKVTLDQITFSARLFDLGGLDQRYRRLVADTIDDKRAPELISAVLRHGALERGDAQIVLKTSERTARNTLSKLTAAGYLTSASPKTPVRLAFPLDYRERLFPNLFGDGDMPV
complement(87675..88910)           PHAGE_Rhizob_RHEph10_NC_034248: RegA; Dshi_4021; phage(gi100039)                     7.05e-19            DinoroseobactershibaeDFL12DSM16493MDYTPVTPFRRTIDAAILKHQAATQEDLPPAGANKWEVLRELAAARVAFGLSDRDLTVLQALVSFHQATILGGNDSELIVHPSNKAICERLNGMPCSTMRRHLSNLVQTGFVVRRDSPNGKRYARRYGDEKVAFGFDLSPLVRRFQEVCEAAETVRAAEERYKRLRATVSLMRRDLAGLAEYGRSLRPDQGVWDQFSDLAALMARDLRRKLEMEDLRRIEDALGSALDHARSLLDGCETENMSTNDAVSEQHYQNSNKDSYDLEPRLEKARGGGAVRETPEVANSHLCSEDEGNSTATIDDQLMPNIPLGLVLASCQEFKAYSEQPVRHWHDLVRVADVVRPMMGISPSAWDEAKRYMGPEEASVVIVAMLERFADIRSPGGYLRTLSSKAAIGEFSCGPMIMALMRRDAA
complement(89088..90104)           PHAGE_Gordon_Nyceirae_NC_031004: late promoter transcription; Dshi_4022; phage(gi100046)     7.38e-06            DinoroseobactershibaeDFL12DSM16493MTSGKKKRMSMLDSLAAAGAPSPAPQTGAVTPMMTSNRALRSARDAVDSHHVWELDPASIEDGRMADRLDPADVLDLRDAIEANGQTVPILVRRAPGEDDRYLLVYGRRRLEAIRQSDKVTKVRALVTNLDDDSALRAQISENMGRRDLSFIEKALFAKDLVSSGFGNQSQVAEILTVTKSSISMAIAIADMVGPDLVRAIGAAHGIGRPRWESLGRAIDENGLDCEDLIGIAKEARENAETSMVVDDVASTNDPSIQAFLAVEKAVTKAIKPAKSPSPAPPSSVPLKIGGKRGGTVKRTAKGLSIELAGGDFADWVETQVHDMIEDLHERWKQRSED
complement(90101..91288)           PHAGE_Klebsi_phiKO2_NC_005857: plasmid partition protein SopA; Dshi_4023; phage(gi46402111)     5.45e-35            DinoroseobactershibaeDFL12DSM16493MDNTFVHEDLNAVIRQHSEWLANQLHSQRESLFPPDAEKTMRKFTSGEAAALLGVNDSYLRKLNLDGKGPSPELTAGNRRLYSAQDIQALRVLLEKTARKPGDYVPGRRERDHLQVIGVMNFKGGSGKTTTSAHLAQRLALRGYRVLGIDLDPQASFTALHGVQPELDLEDGGTLYDAIRYEDPEPIRSVIRKTYIPNLDLIPGNLELMEFEHDTPRALAQGNAGLFFFRVKEALAQVDEDYDVVVIDCPPQLGFLTMSALSAATGVLVTIHPEMLDVMSMSQFLRMTADLMDVIAESGADMSHDWMRYVLTRYEPQDAPQNRIVAFLRTMYGEAVLNSPMLKSTAISDAGLTKQTLYEVERSAFTRSTYDRAIESLNTLNDEIADLIQKTWGRT
91602..91829                       transcriptional regulator/antitoxin, MazE; Dshi_4024                                 N/A                 DinoroseobactershibaeDFL12DSM16493MQVAKWGNSLAVRLPADLVRELGLKEGDQVDLVKDDGTILVRRQPRADEVLQGLRRFRRKLPKDARLSRDAAHER
91819..92214                       conserved hypothetical memebrane protein; Dshi_4025                                  N/A                 DinoroseobactershibaeDFL12DSM16493MSAEFADTNVVLYLLDDGPKAERAEEILGQGPRISVQVLNEAMVNCRRKAGLSWEDTGAFLEGITSVCPVEGLTVQTHQVGRALAEKYQLSVYDAMIVSAALIAGCTTLWTEDMHDGLLVEDRLRIVNPFA
complement(92198..93094)           PHAGE_Escher_pro483_NC_028943: DNA invertase; Dshi_4026; phage(gi971758535)          2.76e-41            DinoroseobactershibaeDFL12DSM16493MSLIGYARVSTEDQTPLPQSETLQSAGCAEIFEEHASGGNRARPVLARVLERVQSGDTLVVVRIDRLARSLSHLLEVIERLEAKGAFFRSLQDPIDTASPQGKFTLQVLGAAAEFERALIRERTKAGLVSARAKGRVGGNPGLRTKDPAALRKVRLARQDGYMERLNETAQDWVPHVRRLRPDMAWEDVLRTINAPLPQDRRWTQSRLLRAVKAYVRDGFLPAEVLGRAGRRKTDDRLPAIVAAIKGSDPDITLQAICDRLEAMRERTPRGRTSWQPSSVRMLLERAERLGLLVRQMD
92884..92895                       attR                                                                                 N/A                 GAGACCGCGCAA
complement(93153..94271)           phage integrase; Dshi_4027                                                           N/A                 DinoroseobactershibaeDFL12DSM16493MEETPEIQPPDAEKSTSAPSDSNNQAQRDERDQVSTDPIALPAHVAGSGTLDRLVDTARDYARASTAENTNKAYAADWKHFARWCRLKGTDPLPPSPEMIGLYLTDLAAPAKGTPALSVSTIERRLSGLAWNYAQRGFSLDRKDRHIANVLAGIKRRHARPPVQKEAILPEDILAMVATLPFDLRGLRDRAILLIGFAGGLRRSEVVSLDVSKDDTPDSSGWIDVFEDGAVLTLNAKTGWREVEIGRGSSEQTCPVHALEQWLHFAKIDFGPVFTRTSRDGKRAMDERLNDKHVARLIKKTVLKSGIRAELPENERLALFSGHSLRAGLASSAEVDERFVQKQLGHASAEMTRRYQRRRDRFRVNLTKAAGL
