gi|00000000|ref|CP001015.1|  Streptococcus pneumoniae G54, complete genome. 2078953, gc%: 39.64%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
836906..837544                     PHAGE_Pseudo_EL_NC_007623: putative thymidylate kinase; SPG_0861; phage(gi82701134)     4.50e-31            StreptococcuspneumoniaeG54MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVLIGEKIREVILDPSHTQMDAKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIEAIDWLNQFATDGLKPDLTLYFDIEVEEGLARIAANSDREVNRLDLEGLDLHKKVRQGYLSLLDKEGNRIVKIDASLPLEQVVETTKAVLFDGMGLAK
837541..838431                     PHAGE_Dinoro_vB_DshS_R5C_NC_041921: hypothetical protein; SPG_0862; phage(gi100099)     1.39e-08            StreptococcuspneumoniaeG54MKQDQLKAWQPAQFDRFVRILEQDQLNHAYLFSGFFGSLEIAQFLAKSLFCTDKVGVLPCEKCRSCKLIEQGEFPDVTLIKPVNQVIKTERIRELVGQFSQAGIESQQQVFIIEQADKMHPNAANSLLKVIEEPQSEVYIFFLTSDEEKMLPTIRSRTQIFHFKKQEEKLILLLEQMGLVKKKATLLAKFSQSRAEAEKLANQASFWTLVDESERLLTWLVAKKKESYLQVAKLANLADDKEXQDQVLRILEVLCGQDLLQVRVRVILQDLLEARKMWQANVSFQNAMEYLVLKEI
838471..838788                     conserved hypothetical protein; SPG_0863                                             N/A                 StreptococcuspneumoniaeG54MDKKELFDALDDFSQQLLVTLADVEAIKKNLKSLVEENTALRLENSKLRERLGEVEADAPVKAKHVRESVRRIYRDGFHVCNDFYGQRREQDEECMFCDELLYRE
838791..839660                     conserved hypothetical protein; SPG_0864                                             N/A                 StreptococcuspneumoniaeG54MQIQKSFKGQSPYGKLYXVATPIGNLDDMTFRAIQTLKEVDWIAAEDTRNTGLLLKHFDISTKQISFHEHNAKEKIPDLIGFLKAGQSIAQVSDAGLPSISDPGHDLVKAAIEEEIAVVTVPGASAGISALIASGLAPQPHIFYGFLPRKSGQQKQFFDSKKDYPETQIFYESPHRVADTLENMLEVYGDRSVVLVRELTKIYEEYQRGTISELLESISETSLKGECLLIVEGASQDVEEKDEEDLFLEIQARIQQGMKKNQAIKEVAKIYQWNKSQLYAAYHDWEEKQ
839887..840405                     conserved hypothetical protein; SPG_0865                                             N/A                 StreptococcuspneumoniaeG54MRTYENKEELKAEIEKTFEKYILEFDNIPKNLKDKRADEVDRTPAENLAYQVGWTNLVLKWEEDERKGLQVKTPSDKFKWNQLGELYQWFTDTYAHLSLQELKAKLNENINSISAMIDSLSEEELFEPHMRKWADEATKTATWEVYKFIHVNTVAPFGTFRTKIRKWKKIVL
840514..840651                     phage protein, point mutation; SPG_0866                                              N/A                 StreptococcuspneumoniaeG54MDFEYFYNREAERFNFLKVPEILVDREEFRGLSAEAIILYSILLK
840658..841161                     PHAGE_Strept_9874_NC_031023: hypothetical protein; SPG_0868; phage(gi100032)         7.80e-11            StreptococcuspneumoniaeG54MSFKNNWIDKEGRVFIYFTVEEIMKRRNISKPTAIKTXDELDVKKGIGLIERVRLGLGKPNIIYVKDFMNIFQVKENDLQKSKNLTSEVKDFNLRSKENELQEVKNLDSNYIENNKSKYSKREYSFGENGLGTFQNVFLAAEDISDLQIIMNSQLENYIRLPAKLES
complement(841150..841539)         PROPHAGE_Strept_2603V/R: IS1381 transposase protein B; SPG_0867; phage(gi22537127)     1.21e-79            StreptococcuspneumoniaeG54MKAQAIVTSQGRIVSLDITVNYCHDMKLFKMSRRNIGQAGKILADSGYQGLMKIYPQVQTPRKSSKLKPLTVEDKACNHALSKERSKVENIFAKVKTFKMFSTTYRNHRKRFGLRMNLSAGIINHELGF
complement(841767..841955)         PROPHAGE_Strept_2603V/R: IS1381 transposase protein A; SPG_0869; phage(gi22537126)     7.56e-34            StreptococcuspneumoniaeG54MNDEASKQLTDARFKRLVGVQRTTFEEMLAVLKTAYQLKHAKGGRKPKLSLEDLLMATLQYV

#### region 2 ####
complement(1337174..1338109)       PHAGE_Mycoba_Wildcat_NC_008206: gp44; SPG_1376; phage(gi109521481)                   1.76e-05            StreptococcuspneumoniaeG54MKWTKIIKKIEEQIEAGIYPGASFAYFKDNQWTEFYLGQSAPEHGLQTEAGLVYDLASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDLLTAPELKEAMFHLNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKVGPVELAVPTVRGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLADDFARDLNQNFSPLDDKERSLAWNLEGDWLDHTGYTGTFIMWNRQKQEATIFLSNRTYEKDERAQWILDRNQVMNLIRKEE
complement(1338106..1338831)       C3-degrading proteinase; SPG_1377                                                    N/A                 StreptococcuspneumoniaeG54MNVNQIVRIIPTLKANNRKLNETFYIETLGMKALLEESAFLSLGDQTGLEKLVLEEAPSMRTRKVEGRKKLARLIVKVENPLEIEGILSKTDSIHRLYKGQNGYAFEIFSPEYDLILIHAEDDRASLVEVGEKPEFQTDLASISLSKFEISMELHLPTDIESFLESSEIGASLDFIPAQGQDLTVDNTVTWDLSMLKFLVNELDIASLRQKFESTEYFIPKSEKFFLGKDRNNVELWFEEV
complement(1338915..1339550)       PHAGE_Rhodoc_Weasels2_NC_041887: hypothetical protein; SPG_1378; phage(gi100071)     1.84e-07            StreptococcuspneumoniaeG54MAVQLLENWLLKEQEKIQTKYRHLNHISVVEPNILFIGDSIVEYYPLQELFGTSKTIVNRGIRGYQTGLLLENLDAHLYGGAVDKIFLLIGTNDIGKDVPVNEALNNLEAIIQSVARDYPLTEIKLLSILPVNEGEKYQQAVYIRSNEKIQNWNQAYQELASAYMQVEFVPVFDCLTDQAGQLKKEYTTDGLHLSIAGYQALSKALKDYLY
complement(1339552..1340379)       Cof family protein; SPG_1379                                                         N/A                 StreptococcuspneumoniaeG54MMIKVIATDMDGTLLDAXGQLDLPRLEKILDQLDQRGIRFVIATGNEIHRMRQLLSPLVDRVVLVVANGARIFENNELIQAQTWDDAIVNKALAHFKGRACQDQFVVTGMKGDFVKEGTIFTDLESFMTPEMIEKFYQRMQFVDELTSDLFGGVLKMSMVVGEERLSSVLEEINTLFDGRVRAVSSGYGCIDILQAGIHKAWGLEELLKRWDLKSQAIMAFGDSENDVEMLEMAGIAYAMENADEKAKAVATALAPANSQGGVYQVLENWLEKGE
complement(1340483..1340737)       conserved hypothetical protein; SPG_1380                                             N/A                 StreptococcuspneumoniaeG54MGNFISNQRIESMGDEENAKWTERGVLMDVTIKKKDGKTTIGTAKAHPTWVNRTPKGTFSPEGYPLYHYQTYILEDFIEGWQSS
complement(1340738..1341454)       PHAGE_Staphy_StB20_like_NC_028821: capsule biosynthesis protein CapA; SPG_1381; phage(gi971746522)     8.48e-29            StreptococcuspneumoniaeG54MAHGDLLYHDGLFFSAKKEDGTYDFHENFEYVTPWFKQADLAIGDFEETINKDHYLAGYPLFNAPAEVMDAIKEAGYHVLDLAHNHILDSQIEGVISTADIIEKAGITPIGVYTHEPRDQAPLVIKEVNGIKVALLAYSYGFNGIEQYISQEDYNRYLSDLNEDKIKAEVERAEKEADITIIMPQMGVEYRLEPTEEQKALYHKMIDWGADIIFGGYPHVVEPSETVEKDGDKKLIVY
1341967..1342578                   PHAGE_Synech_S_SSM7_NC_015287: RIIA-RIIB membrane-associated protein; SPG_1382; phage(gi326783953)     1.33e-21            StreptococcuspneumoniaeG54MSAIERITKAAHLIDMNDIIREGNPTLRAIAEKVTFPLSDQEIILGEKMMQFLKHSQDPVMAEKMGLRGGVGLAAPQLDISKRIIAVLVPNIVEEGETPQEAYDLEAIMYNPKIVSHSVQDAALGEGEXCLSVDRNVPGYVVRHARVTVDYFDKDGEKHRIKLKGYNSIVVQHEIDHINGIMFYDRINEKDPFAVKDGLLILE
1342623..1343351                   PHAGE_Rhodoc_Trina_NC_042040: replication and recombination DNA helicase; SPG_1383; phage(gi100033)     7.24e-10            StreptococcuspneumoniaeG54MKTNDIVYGVHAVTEALLANTGNKLYLQEDLRGKNVEKVKELATEKKVSISWTSKKSLSEMTEGAVHQGFVLRVSEFAYSELDYILAKTRQEENPLLLILDGLTDPHNLGSILRTADATNVSGVIIPKHRTVGVTPVVAKTATGAIEHVPIARVTNLSQTLDKLKDEGFWTFGTDMNGTPCHKWNTKGKIALIIGNEGKGISSNIKKQVDEMITIPMNGHVQSLNASVAAAILMYEVFRNRL
complement(1343390..1344301)       PHAGE_Bacill_G_NC_023719: gp344; SPG_1384; phage(gi593777800)                        7.93e-107           StreptococcuspneumoniaeG54MYDTIIIGAGPAGMTAALYAARSNLKVALIEGGLPGGQMNNTSDIENYPGYANISGPELAEKMFEPLENLGVEHIYGYVENVEDHGDFKKVMTDDQTYETRTVIVATGSKHRPLGVPGEEELNSRGVSYCAVCDGAFFRDQDLLVVGGGDSAVEEALFLTRFAKTVTIVHRRDQLRAQKVLQDRAFANEKISFIWDSVVREIKGENRVESVVFENVKTGQVTEQAFGGVFIYVGLDPLSDFVKELNIQDQAGWIVTDNHMKTAVDGIFAVGDVRLKDLRQVTTAVGDGAIAGQEAYKFITEHS
complement(1344367..1344591)       conserved hypothetical protein; SPG_1385                                             N/A                 StreptococcuspneumoniaeG54MLLQLFSLYFESLILTTILVLIFLGIWIGLRAMSGVDKTARARQAHLYDMIMIGVLVVPVLSFAVMSLILVFKA
complement(1344669..1345412)       PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; SPG_1386; phage(gi371496158)         4.35e-38            StreptococcuspneumoniaeG54MIKISNLSKSFSGQTVLDHLDLDIQKGEVVALIGSSGAGKSTFLRSLNYLETPDSGSIQIDGFSVDFSKITQEEILALRRKLSMVFQQFNLFERRTALDNVKEGLVVVKKLSDQEATKIAKEELAKVGLSDRENHYPRHLSGGQKQRVALARALAMKPDVLLLDEPTSALDPELVGEVEKSIADAAKSGQTMILVSHDMPFVAQVADKILFLDKGKIIESGTPDEIIHTPKEERTKEXFASYKRTYI
