gi|00000000|ref|NC_000000|  Clostridium botulinum B str. Eklund 17B plasmid pCLL, complete [asmbl_id: NC_000000].47642, gc%: 24.95%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
19743..19922                       PHAGE_Clostr_phiCD211_NC_029048: hypothetical protein; CLL_0030; phage(gi981221019)     1.11e-06            MKGKVTFNISGSGSKSARLTIPAALIELMKITEDNREVEITYEDGKLVVEKVSEYVEGK
19906..20178                       PHAGE_Clostr_phiCDHM11_NC_029001: putative regulatory protein; CLL_0031; phage(gi971764691)     9.73e-16            MLKENDRLGLLTLIRKENHKWRTYWYYKCDCGNEKWIRADALNRTKKPTGSCGCLAENTQFKKEDITNERFGKLQAIRPTEQKRGNSTVY
20484..20612                       conserved hypothetical protein; CLL_0032                                             N/A                 MKFDSSASDNIRAIWAFTFALMQASFYDNGNHPKMLIENFKL
complement(20882..22762)           PHAGE_Clostr_c_st_NC_007581: hemoagglutinin component HA-70; CLL_0033; phage(gi80159768)     0.0                 MNSSIKKIYNHIQEKVINYSDTIDLADGNYVVSRGDGWILSRQNQILGGSVISNGSTGIVGDLRVNDNAIPYYYPTPSFNEEYIKNNIQTVFTNFTEANQIPIGFEFSKTAPSNKNLYMYLQYTYIRYEIIKVLQHEIIERAVLYVPSLGYVKSIEFNLGEKINKDFYFLTNDKCILNEQFLYKKILETTKNIPTNNIFNSKVSSTQRVLPYSNGLYVINKGDGYIRTNDKDLIGTLLIEAGSSGSIIQPRLRNTTRPLFTTSNNTKFSQQYTEERLKDAFNVQLFNTSTSLFKFVEEAPSNKNICIKAYNTYEKYELIDYQNGSIINTAEYYLPSLGYCEVTNAPSPESEVVKTQVAEDGFVQNGPEEEIVVGVIDPSENIQEINTAISDNYTYSIPDIVDNNPFYILFTVNTTGIYKINAQNNLPPLKIYEAIGSGNRNLQSGNLCDDHIKAINYITGFDSSNAKSYLVVLLNKNKNYYIRVPQTSSNIENQIKFKREEGNIRILANSSVNIIDNLNSTGEHYYTRQSPDVGNYISYEFTVPGNFNNKDTSNIRLYTSNNQGIGTLFRVTETIDGYDLIDIQHNLHLLNSTKSIRLLNGAIYILKVEVTELNNYNIRLHIDITN
complement(22776..23216)           PHAGE_Clostr_c_st_NC_007581: hemoagglutinin component HA-17; CLL_0034; phage(gi80159769)     1.55e-54            MSVERTFLPDGNYNIKSIFSGSLYLNPVSGSLTFSSESSANNQKWNVEYMAKNRCFKISNVAEPNKYLSYDNFGFISLDSLSNKCYWFPIKIAVNTYIMLNLNKVNELDYAWDIYDTNENILSQPLLLLPNFDIYNSNQMLKLEKI
complement(23279..24157)           PHAGE_Clostr_c_st_NC_007581: main hemagglutinin component HA-33; CLL_0035; phage(gi80159770)     1.10e-49            MEHYSVIQNSLNDEIVTISCKADTNLFFYQTVGNVSLFQQTRNYLERWRLIYDANKAAYKIKSMDSHNTNLVLTWNAPTHNISAQQDSNADNQYWLLLKDIGSNSFIIASYKNPNLVLYADTVARNLKLSTLNNSSYIKFIIEDYMISDFNNFTCKISPILDSSKVVQQVAMTDLSVNLYTWDYGRNQKWTIKYNKEKSAYQFFNTILSNGVLTWISSNGNTVRVSSIAQNNDAQYWLINPVSNAYETYTITNLHDTTKALDLYNSQTANGTTIQVFNYHGDDNQKWFIRNP
24384..24923                       PHAGE_Clostr_c_st_NC_007581: probable botulinum neurotoxin regulator protein; CLL_0036; phage(gi80159767)     7.35e-37            MNKLFLQIKRLKNDNREFQEIFKNFEKTIDIFTRKYNIYDNYNDILYHLWYTLKKVDLSNFNTQNDLERYISRTLKRYCLDICNKRKIDKKIIYNSEIVGEKLRLIANSYSSYSEVEFNDLISILPDDQKKIIYMKFVEDIKEIDIAKKLNISRQSVYKNKIMALGRLKPILVYIFKKF
25062..28655                       PHAGE_Clostr_c_st_NC_007581: botulinum neurotoxin type C1 nontoxic-nonhemagglutinin component; CLL_0037; phage(gi80159771)     0.0                 MNINDNLSINSPVDNKNVVVVRARKTDTIFKAFKVAPNIWVAPERYYGESLSIDEEYKVDGGIYDSNFLSQDSEKDKFLQAIITLLKRINSTNAGEKLLSLISTAIPFPYGYIGGGYYAPNMITFGSAPKSNKKLNSLISSTIPFPYAGYRETNYLSSEDNKNFYASNIVIFGPGSNIVENNTVFYKKEDAENGMGTMTEIWFQPFLTYKYDQFYIDPAIELMKCLIKSLYFLYGIKPSDDLVVPYRLRNELENIEYSQLNIVDLLVSGGIDPKFINTDPYWFIDNYFSNAKKVFEDHRNIYKTEVEGNNAIGNDIKLRLKQKFRINTNDIWELNLNYFSKEFSIMMPDRFNNALKHFYRKQYYKIDYPENYSINGFVNGQINAQLFLSDRNQDIINKPEEIINLLNGNNVSLMRSNIYGDGLKSTVDDFYSNYKIPYNRAYEYHFNNSNDSSLDNVNTGVIDNIPEIIDVNPYKENCDKFSPVQKITSTREINTNIPWPINYLQAQNTNNERFSLSSDFVEVVSSKDKSLVYSFLSNVMFYLDSIKDNSPIDTDKEYYLWLREIFRNYSFDITATQEINTNCGINKVVAWFGKALNILNTSDSFVEEFQNLGPSSLINKKENLSMPIIEIDEIPNYMLGLPLNDLNEKLFNIYLKNILYFKKVYFNFLDQWWTEYYSQYFDLICMAKQSILAQEKLIKQIIQNKLQDLSKADISMDKLNLMNLATGKTFIDLSNESQIAIDNINDFLNKSAICFFDTNIYPKFISFMEQCINSVNSNVTTFIQKCTNITEDEKLQLIKLNTFMNIDFEFFDIQNIKDLITSETDLIKEEKESDYNLFLLTLQEDNNKVIEDISGKNTLVKYSDSISLVYGVNGDALYLKEPNESVSFSNKVFENGLTNSFSICFWLRNLGEDIITSKLIENKADNCGWEIYFENNGLVFSIVDCNGNEENIYLSDVISKNWYYISISIDRLRNQLLIFINDKLIANQSIEQILNIYSSSTISLVNENNPIYVEGLSILNRSITSEEVVNNYFSYLNNSYIRDISGERLEYNKIYELYNYVFPENSLYEVTENNNIYLSIKDTNDLNIQGAKFKLINIDTNKQYVQKWDEGVVCLLGDEEKYVDISSENNRIQLVSSRDTAKKIIFNNDIFKPNCLTFAYNNKYLSLSFRDRNYNWMIYNNNDNIPKAAHLWTLKGI
28681..32556                       PHAGE_Clostr_c_st_NC_007581: botulinum neurotoxin type C1 precursor; CLL_0038; phage(gi80159772)     0.0                 MPVTINNFNYNDPIDNDNIIMMEPPFARGTGRYYKAFKITDRIWIIPERYTFGYKPEDFNKSSGIFNRDVCEYYDPDYLNTNDKKNIFLQTMIKLFNRIKSKPLGEKLLEMIINGIPYLGDRRVPLEEFNTNIASVTVNKLISNPGEVEQKKGIFANLIIFGPGPVLNENETIDIGIQNHFASREGFGGIMQMKFCPEYVSVFNNVQENKGASIFNRRGYFSDPALILMHELIHVLHGLYGIKVDDLPIVPNEKKFFMQSTDTIQAEELYTFGGQDPSIISPSTDKSIYDKVLQNFRGIVDRLNKVLVCISDPNININIYKNKFKDKYKFVEDSEGKYSIDVESFNKLYKSLMFGFTEINIAENYKIKTRASYFSDSLPPVKIKNLLDNEIYTIEEGFNISDKNMGKEYRGQNKAINKQAYEEISKEHLAVYKIQMCKSVKVPGICIDVDNENLFFIADKNSFSDDLSKNERVEYNTQNNYIGNDFPINELILDTDLISKIELPSENTESLTDFNVDVPVYEKQPAIKKVFTDENTIFQYLYSQTFPLNIRDISLTSSFDDALLVSSKVYSFFSMDYIKTANKVVEAGLFAGWVKQIVDDFVIEANKSSTMDKIADISLIVPYIGLALNVGDETAKGNFESAFEIAGSSILLEFIPELLIPVVGVFLLESYIDNKNKIIKTIDNALTKRVEKWIDMYGLIVAQWLSTVNTQFYTIKEGMYKALNYQAQALEEIIKYKYNIYSEEEKSNININFNDINSKLNDGINQAMDNINDFINECSVSYLMKKMIPLAVKKLLDFDNTLKKNLLNYIDENKLYLIGSVEDEKSKVDKYLKTIIPFDLSTYTNNEILIKIFNKYNSEILNNIILNLRYRDNNLIDLSGYGAKVEVYDGVKLNDKNQFKLTSSADSKIRVTQNQNIIFNSMFLDFSVSFWIRIPKYRNDDIQNYIHNEYTIINCMKNNSGWKISIRGNRIIWTLIDINGKTKSVFFEYNIREDISEYINRWFFVTITNNLDNAKIYINGTLESNMDIKDIGEVIVNGEITFKLDGDVDRTQFIWMKYFSIFNTQLNQSNIKEIYKIQSYSEYLKDFWGNPLMYNKEYYMFNAGNKNSYIKLVKDSSVGEILIRSKYNQNSNYINYRNLYIGEKFIIRRKSNSQSINDDIVRKEDYIHLDFVNSNEEWRVYAYKNFKEQEQKLFLSIIYDSNEFYKTIQIKEYDEQPTYSCQLLFKKDEESTDDIGLIGIHRFYESGVLRKKYKDYFCISKWYLKEVKRKPYKSNLGCNWQFIPKDEGWTE

#### region 2 ####
27492..27506                       attL                                                                                 N/A                 TTTGATATTCAAAAT
34265..34810                       PHAGE_Ralsto_RSM3_NC_011399: hypothetical protein; CLL_0042; phage(gi209901327)      1.36e-10            MIYGYVRVNTKEQLNNNSIEKQIFEIFDVYSNAIIYEETFNNKFTVRPKFLELLDLLNKHDILVVTELDKFCTSIKEGLKYIKMLINNGVKVHILNMGMIENTSIGNLIIKNLIAFDKFEEMILKQYSKNKDGRPKKFTLIQLRYALSLLKVNGGKNSYNEVARITGISKSTLIREMKKMS
35009..35329                       hypothetical protein; CLL_0044                                                       N/A                 MKKTKIEIRLTEVQKEDIKLRAKNKSLKMSEYILNKIYENPESTNDIKDLLRFNIKELLRLKVEYLNQKKECDDANKNKKIENKLVDLDKIITTLTAMLNDEEFNF
35980..37320                       PHAGE_Bacill_IEBH_NC_011167: potential replication protein; CLL_0045; phage(gi197261587)     3.69e-24            MTLPGHSQILHNLYKEHDNGYVAIFRKGFKGIYQRHYKKQDLEEALDVFFSGGYNNELYISMNTFLKPNRTSENLRYLNALYIDIDCYKLNIRKESVLFFLENDFYNKIIPEPSVVVDSGRGLYLVWFIEPVPSRALTLWRAMQYYLYSALKEFGADRAALDESRVLRVVGSYNSKSDSYVKIVDFNNFRYTLKDLKSEYLPEIKKEDKKIKKKRKSNKIHIFNFYGLHKSRMEDIYKLVQLRSYDMKGKRELILFLYRYYATLVEGETVAEEMTLELNESFIEPLPLNEINSTKSNYIGKYNYKNKTLVELLEISLEEMKHMTSLISKEHKFQRNNERRKSLRRNENGLTKREQLKKDNLIKIIKLMDEGRKTKEIAETLDISLRMVQKYKKELKENNKLYEDLKKEILSINDNYNEDEIQCYDIDLNLEEIEEIFNDDLKKVGS
37528..38298                       S-layer protein; CLL_0046                                                            N/A                 MKSKLLKTIALTLISVNTIVYPIYAAEVPKFSNLNDVEENIYTHLINRDSNINFIYTGSTREFKDNIVKTIKAAYSKDDYTERSWLEIKPNVNISDGKINTSINFEYLTNKEQEEFIDIEIKKITDKLINDKMSDFEKVKAINDYLANRYEYDYTLSSSNVYSALITNYTVCQGYSLTAYKMLKNAGIESRIGVGTNKGASHSWNIVKIEDSWYHLDITNNDSTRSNKYFLVSDKFLEDNNYKWNRTEYPEALNNK
38545..39438                       putative ATPase; CLL_0047                                                            N/A                 MNIGIDLGNGYTKFKGKKFASKVKMGRLANFGEKNKEVHEVKYNNASYVVGEGQFFITDDRYFTNEYKICLLTAIALASNEIVIEANICVGLPVMKYMSDVKRRLEDHLNTIGAEKITVNGEEKIIHIKSVTVFVESALVVKDRSQGNEITIDIGAGTENIIQWENGVPVNFDTKNKSFYNLYNKISKYLKDVGKGDVSTEYIEKTLGQDEIIINQELVDIRDTHNIIEQHVRELASKIISEFDISRARRIRLMGGGGLPTYKYWKNIIEKVELADNAQFINSEIYETVLEMSGIND
39431..39790                       hypothetical protein; CLL_0048                                                       N/A                 MTNNQNSAKEKKRDLKPVSFNYDNERDVKLLEYAQKAGMKFGTYVKFLIEKEMNGSNNNNLDINSIANAINQLTKVIESKSFVTNSISSDNIDDKPKKLSDKDKETKNIISGILNMNSK
40261..40515                       PHAGE_Pseudo_phi2_NC_030931: hypothetical protein; CLL_0050; phage(gi100018)         1.74e-06            MNLIKKQRIKNKISQVELANLCKVKQSQISRIETNKELPSAKLIVKLATNLNLCPSDVFSFFYENNKCDFSENDKCNSNKNEKV
40570..41277                       PHAGE_Brevib_Abouo_NC_029029: transcriptional regulator; CLL_0051; phage(gi971767217)     1.37e-15            MKGNVLIFSKNLKKLRTFNKMKQEDLAVKIGVARSNISYYETQKSEPTLTPLINIANIFNVTINELVTVELTDDIIQEKNQQQDNITKVFSSSEIFSKNLKELRIGKNMYQIELAKEVKTSKSNISFYESGRSEPTLGVLMRICDFFNIKLSELVSKDLKPTEWIKSESDFIKKISYDLESVENKDENFLKFLYELKEYYLNQSKRLEELVQIKIPAKLKEIDNIIEFVKEKRNE
41438..41674                       PHAGE_Geobac_GBSV1_NC_008376: repressor protein; CLL_0052; phage(gi115334659)        7.66e-06            MSSQFKKNRKNKLIDLRVKNNLSRSYVADKIGTSEDCIARIENSKQKIILDEHAVRLAKVYRVSLDDIYVASIQKSEL
41747..42109                       PHAGE_Clostr_vB_CpeS_CP51_NC_021325: hypothetical protein; CLL_0053; phage(gi509140084)     6.74e-08            MLDKKKVRLDKKEVKNLFVAGYIASEIADILKAKVDTVKKCIDRNFKIEEVLSIHKEKRRIKKDIKRVISNTSNRYMGTEQLIKYNRSSFNMNKNGVLVYNNDHGLAPVDLPQRFKPVLG
42120..42332                       hypothetical protein; CLL_0054                                                       N/A                 MLKFRRKDVNLMFFKDIKVKHGIYVGIAPKGEQVIFNKFNRNNQGNSLTIGVPGRGSEFNMTTKFINTND
42429..42941                       conserved hypothetical protein; CLL_0055                                             N/A                 MKKKLIAGVLATATVVGGVIPTTAFADVKEADNQIIIEEVQNVLPVIESESTTGSAIKIENDDKNLENEDIDEIQDLNQNEEIIVDEQQEIGISEVKELKATIDENITIGEKVNVKVIGFNATGEEIKLDKEKISYKWFADKEIVGNNDYLNITDDMANREISCRVDYRN
42953..47533                       PHAGE_Strept_Cp_1_NC_001825: lysozyme; CLL_0056; phage(gi9629549)                    1.38e-14            MKRKLIASLLVLGAVVNIIPTEGVMAATTVSTNTNSVVARNVNSKLNHRIINTPIGNVDCYSYTRGSEKIPLLGNSGYDLVSIGGYSNHSKSGSSSSTNYYALVANEGDPITLSLAADGKDGMSMTVADTECFRARRNDKADNGYKGASITFKMPKTTLDYKIQTVYDDKGVSSHDKYNTYFLACKGSSNFSEQGASIALESLLNTTVTNSTTIDDLKKEMQKNLNSSEFTISATQINQVKATESASGKLEGNATVVDSSGNSKTFKFNLPISATGQSSNTLMESYKNSIKNFKGTNTKNQNNILDLVKKTNDDISVSISNFKKTDATDKVDGKITGTLNITGVAPYNFNIEIPRLAQSTDTAKAILEFVVENMNVTNSTDKASIQKLVNNSIDTSVVTAKVDLTDVKKATEANKGIIEGNILIEDKTGVKATIQINKEIEVETQSLSTVKDLYKAYLDTMEKTNSTTEQSIIDAIHITNENIKVKISDFKVNEATETSKGSIQGLIEIQDNEIGEKDTVPVNLIIDYLHQSAKTVVGLYVEAAKNYIATNDTNEQDIINMISITNKDIKVTSDSFKLIPSTDESKGKLSLNLNISDGEKNIVQPLQITINNQPQELATALAETQKLLAQYKITTDDIDMDDLLIKINDNITNPSIFASYSNNDGERIEKVKATQDKNGYVKGSLLLADSKGHKVMIPVNFEILKLSQSLDNAENKVNEYLNNLKANNELKESDVLFDIQNLLDSSITAEITDYKVDAATELSKGMITGKVLLNKDGESRKVAINIEIGLQAQSMENASNLITDKLKDMYLTNTSTAKDLETELSKCITGAEGNKIKIKVADDDFRMMKATQDSDGSVRGKVTLFDSNMNIQYVPYTIKIKQLAQTLDHAASKVNEKLNSLKADNKLTKEVFTEDMKSVITNSEGSKIIIVTDKFELTEATEKIPGKLIVEVTVLDGSSSKTLGKTYEIAKTNQSVEDAQDTIDEIVLPNIKVDNNTSVEDIKNQIKDSVGDNIDVDIKDFKKDESSNKEDGKITGTVIITDKNTGEKIEIPIDITIPKIEETLDEAQDTIDKVLPNIKVDNNTTAEDIKNQIKDNVGGNINVDIKDFKKDDATEKENGKITGTVIITDNNTGEKIEIPIDITIPKIEETLDEAQDTIDKVLPNIKVDNNTTVEDIKNQIKDNVGSNIDVDIKDFKKDDATEKENGKITGTVIITDNNTGEKIEIPIDITIPKIEETLDEAQDTIDKVLPNIKVDNNTTVEDIKNQIKDNVGSNIDVDIKDFKKDDATEKEDGKITGTVIITDKNTGEKTEISIDITIPKLDKPSGGSSSSHHHKNNDELDDFGTIKNPITNSNESNHKGWTSMNGRWHFFDEKGKVKTGWVNDNGNWYYFDSFGVMQTGWQCIDNEWYYLNPVAGQGLGAMQTKWINDNGNWYFCNDSGKMLNGWINDNGNWYFCNDSGKMLNGWINDNGNWYYLNPKSDGTKGKMLNGWINDNGNWYFCNDNGKMAHDTFANGYELGSNGAWIK
45161..45175                       attR                                                                                 N/A                 TTTGATATTCAAAAT
