gi|187426769|ref|CP001062.1|  Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequence. [asmbl_id: NC_000000].210919, gc%: 46.07%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
145918..149226                     PHAGE_Vibrio_VP5_NC_005891: major tail subunit; SbBS512_A0217; phage(gi48696686)     3e-14               MNQIHKFFCNMTQCSQGGAGELPTVKEKTCKLSFSPFVVGASLLLGGPIAFAIPLSGTQELHFSEDNYEKLLTPVDGLSPLGAGEDGMDAWYITSSNPSHASRTKLRINSDIMISAGHGGAGDNNDGNSCGGNGGDSITGSDLSIINQGMILGGSGGSGADHNGDGGEAVTGDNLFIINGEIISGGHGGDSYSDSDGGNGGDAVTGVNLPIINKGTISGGNGGNNYGEGDGGNGGDAITGSSLSVINKGTFAGGNGGAAYGYGYDGYGGNAITGDNLSIINNGAILGGNGGHWGDAINGSNMTIANSGYIISGKEDDGTQNVAGNAIHITGGNNSLILHEGSVITGDVQVNNSSILKIINNDYTGTTPTIEGDLCAGDCTTVSLSGNKFTVSGDVSFGENSSLNLAGISSLEASGNMSFGNNVKVEAIINNWAQKDYKLLSADKGITGFSVSNISIINPLLTTGAIDYTKSYISDQNKLIYGLSWNDTDGDSHGEFNLKENAELTVSTILADNLSHHNINGWDGKSLTKSGEGTLILAEKNTYSGLTNINAGILKMGTVEAMTRTAGVIVNKGATLNFSGMNQTVNTLLNSGTVLINNINAPFLPDPVIVTGNMTLEKNGHVILNNSSSNVGQTYVQKGNWHGKGGILSLGAVLGNDNSKTDRLEITGHASGITYVAVTNEGGSGDKTLEGVQIISTDSSDKNAFIQKGRIVAGSYDYRLKQGTVSGLNTNKWYLTSQMDNQESKQMSNQESTQMSSRRASSQLVSSLNLGEGSIHTWRPEAGSYIANLIAMNTMFSPSLYDRHGSTIVDPTTGQLSETTMWIRTVGGHNEHNLADRQLKTTANRMVYQIGGDILKTNFTDHDGLHVGIMGAYGYQDSKTHNKYTSYSSRGTVSGYTAGLYSSWFQDEKERTGLYMDAWLQYGWFNNTVKGDGVTGEKYSSKGITGALEAGYIYPTIRWTTHNNIDNALYLNPQVQITRHGVKANDYIEHNGTMVTSSGGNNIQAKLGLRTSLISQSCIDKETLRKFEPFLEVNWKWSSKQYGVIMNGMSNHQIGNRNVIELKTGVGGRLADNLSIWGNVSQQLGNNSYRDTQGILGVKYTF
149861..150187                     PHAGE_Entero_BP_4795_NC_004813: putative transposase OrfA protein of IS629; SbBS512_A0220; phage(gi157166066)     7e-56               MTKNTRFSPEVRQRAVRMVLESQGEYDSQWATICSIAPKIGCTPETLRVWGRQHERDTGGGDGGLTTAERQRLKELERENRELRRSNDILRQASAYFAKAKFDRLWKK
150184..151074                     PHAGE_Entero_BP_4795_NC_004813: putative transposase OrfB protein of IS629; SbBS512_A0221; phage(gi157166067)     6e-173              MMPLLDKLREQYGVGPLCSELHIAPSTYYHCQQQRHHPDKRSARAQRDDWLKKEIQRVYDENHKVYGVRKVWRQLLREGIRVARCTVARLMAVMGLAGVLRGKKVRTTISRKAVAAGDRVNRQFVAERPDQLWVADFTYVSTWQGFVYVAFIIDVFAGYIVGWRVSSSMETTFVLDALEQALWARRPSGTVHHSDKGSQYVSLAYTQRLKEAGLLASTGSTGDSYDNAMAESINGLYKAEVIHRKSWKNRAEVELATLTWVDWYNNRRLLERLGHTPPAEAEKAYYASIGNDDLAA
151364..153067                     PHAGE_Pandor_salinus_NC_022098: 5' -nucleotidase; SbBS512_A0223; phage(gi531037072)     1e-05               MSEQRKPCKRGCVHTGTMIPLKKNITLIMFTLSLLTGNPAIAYETDKVYKITVLHTNDHHGHFWRNNHGEYGLSSQKTLVDNIRQKVINNGGSVLLLSGGDINTGVPESDLQKAEPDIRGMNLIGYDAMAVGNHEFDNPLNILRQQEKWATFPFLSANIYQKSTGRRLFSPWKIFIRQNLKIAVIGLTTDDTAKTGNSEYFTDIEFRQPAAEARSVIDELNQQEKPDIIIAATHMGHYDNGESGSNAPGDVEMARSLPTGSLAMIVGGHSQAPVCMASDNKKQWNYIPGTTCVPDKQNGIWIVQAHEWGKYVGQADFEFCNGTMKLVNYQLHPVNLKMRITREDGKTEFSFYTPEITEDPQMLSLLTPFQNKGKAQLDVKVGVVNGRLEGDRSKVRFVQTSMGHLILSALTERIDADFAVVSGGEIRDSIESGNITYKDILKVQPFGNTVVSIDLTGKEVADYLATVAQMKPDSGAYPQFLNTSFVVKKGKIEMLKIKGKSVDLNKKYRMTTFSFNATGGDGYPRIDNRPGYINTGFIDAEVLIEYIREHSPLDAASYEPKGEVSWQ
complement(153054..153254)         PHAGE_Entero_If1_NC_001954: hypothetical protein If1p09; SbBS512_A0222; phage(gi9630756)     7e-21               MTKKLAALQHQLSRKVKFSNNWQKQKHKIQQLHSHIANIRRDYFHKVTATVSKKHVMIVNYVITAN
complement(153340..153540)         ShiE; SbBS512_A0224                                                                  N/A                 MPCFTAMRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYPRSVALES
153615..153863                     PHAGE_Shigel_SfIV_NC_022749: IS1 transposase B; SbBS512_A0225; phage(gi557307573)     5e-31               MSRQCTHYGRWPQHGFTSLKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYVGAKSRQRWLFYAYDRIRRVSVQPEPSGQNLTN
153902..154291                     PHAGE_Stx2_converting_1717_NC_011357: truncated transposase; SbBS512_A0226; phage(gi209447151)     3e-69               MSDMQKNVNPGRRKGCPNYPPEFKQQLVAASCEPGISISKLALENGINANLLFKWRQQWREGKLLLPSSESPQLLPVTLDAAAEQPESLAEDPETLSISCEVTFRHGTLRFNGNVSEKLLTLLIQELKR
154288..154635                     PHAGE_Stx2_converting_1717_NC_011357: transposase; SbBS512_A0227; phage(gi209447152)     1e-59               MIPLPSGTKIWLVAGITDMRNGFNGLAAKVQTTLKDDPMSGHVFIFRGRNGSQVKLLWSTGDGLCLLTKRLERGRFAWPSARDGKVFLTPAQLAMLLEGIDWRQLKRLLTSLTML
154684..156222                     PHAGE_Stx2_converting_1717_NC_011357: transposase; SbBS512_A0228; phage(gi209447153)     0.0                 MSGSLPDDINALKRLLAEQEALNRALLEKLNEREREIDHLQAQLDKLRRMNFGSRSEKVSRRIAQMEADLKALQKESDTLTGRVDDPAVQRPLRQTRTRKPFPESLPRDEKRLLPAASCCPECGGSLSYLGEDAAEQLELMRSVFRVIRTVREKHACTQCDAIVQAPAPSRPIERGIAGPGLLARVLISKYAEHTPLYRQSEMYGRQGVELSRSLLSGWVDACCRLLSPLEEALQDYVLTDGKLHADDTPVPVLLPGNKKTKTGRLWTYVRDDRNAGSTLAPAVWFAYSPDRKGIHPQTHLAGFSGVLQADAYAGFNELYRDGRITEAACWAHARRKIHDVHVRTPSALTEEALKRIGELYAIEAEIRGMTAEQRLAERQLKTKPLLKSLESWLREKMKTLSRHSELAKAFAYALNQWPALTYYADDGWAEADNNIAENALRMVSLGRKNYLFFGSDHGGERGALLYSLIGTCKLNGVEPESYLRYVLDVIADWPINRVGELLPWRVALPTE
complement(156800..157102)         reverse transcriptase; SbBS512_A0230                                                 N/A                 MCHFTETIKKWRIHRSTAESLLDFARHYNAIVRGWIEYYGKFWSRNFSYRLWSAMQSRLLKWMQSKYRLSNRKAQRKLALVRKQYPKLFAHWYLLRASNE
complement(157337..158227)         PHAGE_Entero_BP_4795_NC_004813: putative transposase OrfB protein of IS629; SbBS512_A0231; phage(gi157166067)     5e-168              MMPLLDKLRKLYGVGPVCSELHIAPSTYYHCQEQRHHPDKRSARAQRDDWLKKEILRVYDGNHQVYGVRKVWRQLLREGIRVARCTVARLMAVMGLAGVLRGKKVRTTISRKAVAAGDRVNRQFVAERPDQLWVADFTYVSTWQGFVYVAFIIDVFAGYIVGWRVSSSMETTFVLDALEQALWARRPSGTVHHSDKGSQYVSLAYTQRLKEAGLLASTGSTGDSYDNAMAESINGLYKAEVIHRKSWKNRAEVELATLTWGDWYNNRRLLERLGHTPPAEAEKAYYASIGNDDLAA
