gi|00000000|ref|CP001063.1|  Shigella boydii CDC 3083-94, complete genome. 4615997, gc%: 51.33%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(249590..250408)         PROPHAGE_Escher_CFT073: transposase insF; SbBS512_E0242; phage(gi26249410)           0.0                 ShigellaboydiiCDC308394MCQVFGVSRSGYYNWVQHEPSDRKQSDERLKLEIKVAHIRTRETYGTRRLQTELAENGIIVGRDRLARLRKELRLRCKQKRKFRATTNPNHNLPVAPNLLNQTFAPTAPNQVWVADLTYVATQEGWLYLAGIKDVYTCEIVGYAMGERMTKELTGKALFMALRSQRPPAGLIHHSDRGSQYCAYDYRVIQEQSGLKTSMSRKGHCYDNAPMESFWGTLKNESLSHYRFNNRDEAISVIREYIEIFYNRQRRHSRLGNISPAAFREKYHQMAA
complement(250444..250746)         PROPHAGE_Xantho_33913: ISxac3 transposase; SbBS512_E0243; phage(gi21231087)          2.13e-12            ShigellaboydiiCDC308394MSRKNQRYSKEFKAEAVRTVLENQLSISEGASRLSLPEGTLGQWVTAARKGLGTPGSRTVAELESEILQLRKALNEARLERDILKKATAYFAQESLKNTR
complement(250808..251050)         PHAGE_Shigel_SfIV_NC_022749: replication protein; SbBS512_E0244; phage(gi557307567)     5.86e-51            ShigellaboydiiCDC308394MSTKLTGYVWDGCAASGMKLSSVAIMARLADFSNDEGVCWPSIETIARQIGAGMSTVRTAIARLEAEGWLTRKARRQGNR
complement(251395..251952)         PHAGE_Shigel_SfIV_NC_022749: DNA binding transcriptional regulator; SbBS512_E0245; phage(gi557307565)     2.21e-128           ShigellaboydiiCDC308394MGKHHWKIEKQPEWYVKAVRKTIAKLPGGYAEAADWLDVTENALFNRLRADGDQIFPLGWAMVLQRAGGTHFIADAVAQSANGVFVSLPDIEDVDNADINQRLLEVIEQIGSYSKQIRSAIEDGVVEPHEKTAINDELYLSISKLQEHAALVYKIFCISESNDARECAAPGVVASIASGCGETNA
complement(251996..252301)         PHAGE_Shigel_SfIV_NC_022749: Cro; SbBS512_E0246; phage(gi557307564)                  5.85e-41            ShigellaboydiiCDC308394MDCFHNEIKTLVPLRYKYREGSFQSCNMYAGGTYCMKAYWDSLTKEQQGELAGKVGSTQGYLRLVFNGYKKASFVLAKKLEQCTSGAITKSDLRPDIYPKD
254647..255552                     PROPHAGE_Escher_MG1655: IS2 transposase TnpB; SbBS512_E0249; phage(gi16132094)       0.0                 ShigellaboydiiCDC308394MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLEI
255537..255845                     PHAGE_Salmon_ST64T_NC_004348: holin protein; SbBS512_E0250; phage(gi24371577)        2.69e-45            ShigellaboydiiCDC308394MSGNIGANPGAFWLVLLIIAGWGGLVRYLIDVKQSKATWSWINALAQIVVSGFTGVIGGLISIESGFSIYMILATAGISGAMGSVALTYFWERLTGVKNAKS
255832..256122                     PHAGE_Shigel_SfIV_NC_022749: lysin; SbBS512_E0252; phage(gi557307577)                1.02e-55            ShigellaboydiiCDC308394MQNLNPQRKAFLDMVAWSEGTDNGRQPTRNHGYDIIVGGELFTDYSDHPRKLVTLNPKLKSTAAGRYQLLSRWWDAYRKQLGLKDFEVVNKNWPPS
complement(256963..257265)         PROPHAGE_Shewan_MR-1: ISSod1, transposase OrfA; SbBS512_E0253; phage(gi24373865)     6.49e-11            ShigellaboydiiCDC308394MKKRNFSAEFKRESAQLVVDQKYTVADAAKAMDVGLSTMTRWVKQLRDERQGKTPKASPITPEQIEIRKLRKKLQRIEMENEILKKATALLMSDSLNCSR
complement(257351..257695)         conserved hypothetical protein; SbBS512_E0254                                        N/A                 ShigellaboydiiCDC308394MTFLQHCQCVKAGCFWLTPVQLIEEHCQLRAGNGYLAVTHSRPDKLAFLQASGEQAQTISISPQDFNHVTPSATEDEQVTGEGIIIQHMLYLFTQPVERLTHIGYPSNEPDAGA
257717..259309                     PHAGE_Stx2_c_1717_NC_011357: transposase; SbBS512_E0255; phage(gi209447153)          0.0                 ShigellaboydiiCDC308394MNQKYLIRIAELECQLRQKDQQLSLVEETEAFLRSALARAEEKIEEDEREIEHLRAQIEKLRRMLFGTRSEKLRREVEQAEALLKQREQDSDRYSGREDDPQVPRQLRQSRHRRPLPEHLPREINRLEPEESCCPECGGELDYLGEVSAEQLELVSSALKVIRTERVKKACTKCDCIVEAPAPSRPIERGIAGPGLLARMLTGKYCEHLPLYRQSEIFARQGVELSRALLSNWVDACCQLMTPLNDALYRYVMNSRKVHTDDTPVKVLAPGRKKAKTGYIWTYVRDDRNAGSPEPPAVWFAYSPDHQGKHPEQHLSPFRGILQADAFNGYDRLFSAEREGGALTEAGCWAHARRKVHDVYISTKSATAEEALKLIGELYAIEHEIRGLPVSERLAVRQMQSKPLLTSLYKLMQEKEHTLSKKCRLRDAFRYIRKHWVALCNFSDDGLAEADNNAAERALRAVCLGKKNFMFFGSDHGGERGALLYGLIGTCRLNGIDPEAYLRYILSVLPEWPSNRVDELLPWNVALTNK

#### region 2 ####
660904..661809                     PROPHAGE_Escher_MG1655: IS2 transposase TnpB; SbBS512_E0704; phage(gi16132094)       0.0                 ShigellaboydiiCDC308394MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRATFALDCCDREALHWAVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLEI
661893..662084                     IS1 transposase orfA; SbBS512_E0705                                                  N/A                 ShigellaboydiiCDC308394MLAWLPFPSDVLPAPLLKAWCVTAKALPDISAISALIAVKHGNYSSLTPPLSPVRTRKSLIWP
662095..662598                     PHAGE_Shigel_SfIV_NC_022749: IS1 transposase B; SbBS512_E0706; phage(gi557307573)     2.90e-111           ShigellaboydiiCDC308394MSRQCTHYGRWPQHGFTSLKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTLATLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHYLNIKHYQ
complement(662794..664332)         PHAGE_Stx2_c_1717_NC_011357: transposase; SbBS512_E0707; phage(gi209447153)          0.0                 ShigellaboydiiCDC308394MSSSLPDDINALKRLLAEQEALNRALLEKLNEREREIDHLQAQLDKLRRMNFGSRSEKVSRRIAQMEADLKALQKESDTLTGRVDDPAVQRPLRQTRTRKPFPESLPRDEKRLLPAASCCPECGGSLSYLGEDAAEQLELMRSVFRVIRTVREKHACTQCDAIVQAPAPSRPIERGIAGPGLLARVLISKYAEHTPLYRQSEMYGRQGVELSRSLLSGWVDACCRLLSPLEEALQDYVLTDGKLHADDTPVPVLLPGNKKTKTGRLWTYVRDDRNAGSTLAPAVWFAYSPDRKGIHPQTHLAGFSGVLQADAYAGFNELYRDGRITEAACWAHARRKIHDVHVRTPSALTEEALKRIGELYAIEAEIRGMTAEQRLAERQLKTKPLLKSLESWLREKMKTLSRHSELAKAFAYALNQWPALTYYADDGWAEADNNIAENALRMVSLGRKNYLFFGSDHGGERGALLYSLIGTCKLNGVEPESYLRYVLDVIADWPINRVGELLPWRVALPTE
complement(664381..664728)         PHAGE_Stx2_c_1717_NC_011357: transposase; SbBS512_E0708; phage(gi209447152)          2.10e-76            ShigellaboydiiCDC308394MIPLPSGTKIWLVAGITDMRNGFNGLAAKVQTTLKDDPMSGHVFIFRGRNGSQVKLLWSTGDGLCLLTKRLERGRFAWPSARDGKVFLTPAQLAMLLEGIDWRQPKRLLTSLTML
complement(665857..666330)         PHAGE_Entero_SfMu_NC_027382: tail fiber protein; SbBS512_E0710; phage(gi849255282)     1.41e-29            ShigellaboydiiCDC308394MAIAFKNIQAGTARKFTLSSANNSTKNAAFYLWGNPSRSVVAELGDDSGWHFFSQRNTDNSITFAVNGQVIPLNYGNFDARYKYRTEGVQDVRYGHEMYYSPGSNTVSWRFRAPSGHGLSGIAISDTGRDSADNVNGVYYRPLQKLINGTWYNVASV
666864..667211                     PHAGE_Stx2_c_1717_NC_011357: transposase; SbBS512_E0711; phage(gi209447152)          2.10e-76            ShigellaboydiiCDC308394MIPLPSGTKIWLVAGITDMRNGFNGLAAKVQTTLKDDPMSGHVFIFRGRNGSQVKLLWSTGDGLCLLTKRLERGRFAWPSARDGKVFLTPAQLAMLLEGIDWRQPKRLLTSLTML
667260..668798                     PHAGE_Stx2_c_1717_NC_011357: transposase; SbBS512_E0712; phage(gi209447153)          0.0                 ShigellaboydiiCDC308394MSSSLPDDINALKRLLAEQEALNRALLEKLNEREREIDHLQAQLDKLRRMNFGSRSEKVSRRIAQMEADLKALQKESDTLTGRVDDPAVQRPLRQTRTRKPFPESLPRDEKRLLPAASCCPECGGSLSYLGEDAAEQLELMRSVFRVIRTVREKHACTQCDAIVQAPAPSRPIERGIAGPGLLARVLISKYAEHTPLYRQSEMYGRQGVELSRSLLSGWVDACCRLLSPLEEALQDYVLTDGKLHADDTPVPVLLPGNKKTKTGRLWTYVRDDRNAGSTLAPAVWFAYSPDRKGIHPQTHLAGFSGVLQADAYAGFNELYRDGRITEAACWAHARRKIHDVHVRTPSALTEEALKRIGELYAIEAEIRGMTAEQRLAERQLKTKPLLKSLESWLREKMKTLSRHSELAKAFAYALNQWPALTYYADDGWAEADNNIAENALRMVSLGRKNYLFFGSDHGGERGALLYSLIGTCKLNGVEPESYLRYVLDVIADWPINRVGELLPWRVALPTE
complement(669100..670431)         invasion plasmid antigen; SbBS512_E0713                                              N/A                 ShigellaboydiiCDC308394MQSLSALLNSLETLPDLPPALQKLSVGNNQLTALPELPCELQELSAFDNRLQELPPLPQNLRLLNVGENQLHRLPELPQRLQSLYIPNNQLNTLPDSIMNLHIYADVNIYNNPLSTRTLQALQRLTSSPDYHGPRIYFSMSDGQQNTLHRPLADAVTAWFPENKQSDVSQIWHAFEHEEHANTFSAFLDRLSDTVSARNTSGFREQVAAWLEKLSASAELRQQSFAVAADATESCEDRVALTWNNLRKTLLVHQASEGLFDNDTGALLSLGREMFRLEILEDIARDKVRTLHFVDEIEVYLAFQTMLAEKLQLSTAVKEMRFYGVSGVTANDLRTAEAMVRSREENEFTDWFSLWGPWHAVLKRTEADRWALAEEQKYEMLENEYPQRVADRLKASGLSGDADAEREAGAQVMRETEQQIYRQLTDEVLALRLSENGSQLHHS
670967..671152                     PROPHAGE_Escher_CFT073: transposase; SbBS512_E0714; phage(gi26246249)                3.98e-08            ShigellaboydiiCDC308394MGMWLAENEGVKFWLNVLTELKKRGWSPYLFIKPVVCPPLHHFSALIEILSMVVNSTNPVR

#### region 3 ####
complement(808242..808544)         PROPHAGE_Xantho_33913: ISxac3 transposase; SbBS512_E0860; phage(gi21231087)          1.20e-12            ShigellaboydiiCDC308394MSRKNQRYSKEFKAEAVRTVPENQLSISEGASRLSLPEGTLGQWVTAARKGLGTPGSRTVAELESEILQLRKALNEARLERDILKKATAYFAQESLKNTR
808988..809365                     PHAGE_Shigel_SfIV_NC_022749: IS1 transposase B; SbBS512_E0862; phage(gi557307573)     4.00e-87            ShigellaboydiiCDC308394MDEQWGYVGAKSRQRWLFYAYDRLRKTVVAHVFGERTMATLGRLMSLLSPFDVVIWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHYLNIKHYQ
809509..809655                     YehR; SbBS512_E0863                                                                  N/A                 ShigellaboydiiCDC308394MTIDMEKVDFKALQGISGINVSAEDTKKGITMAQMELVMKAAGFKEVK
complement(809696..810166)         conserved hypothetical protein; SbBS512_E0864                                        N/A                 ShigellaboydiiCDC308394MLSNDILRSVRYILKANNNDLVRILALGNVEATAEQIAVWLRKEDEEGFQRCPDIVLSSFLNGLIYEKRGKDESAPALEPERRINNNIVLKKLRIAFSLKTDDILAILTEQQFRVSMPEITAMMRAPDHKNFRECGDQFLRYFLRGLAARQHVKKS
complement(810213..810932)         DNA-binding response regulator; SbBS512_E0865                                        N/A                 ShigellaboydiiCDC308394MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRISGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEERLEKTLARLRQERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGIYVTSHEGKEGFTELTLRTLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKTLKEAIGL
complement(810929..812614)         PHAGE_Entero_YYZ_2008_NC_011356: putative 2-component sensor protein YehU; SbBS512_E0866; phage(gi209427798)     0.0                 ShigellaboydiiCDC308394MYDFNLVLLLLQQMCVFLVIAWLMSKTPLFIPLMQVTVRLPHKFLCYIVFSIFCIMGTWFGLHIDDSIANTRAIGAVMGGLLGGPVVGGLVGLTGGLHRYSMGGMTALSCMISTIVEGLLGGLVHSILIRRGRTDKVFNPITAGAVTFVAEMVQMLIILAIARPYEDAVRLVSNIAAPMMVTNTVGAALFMRILLDKRAMFEKYTSAFSATALKVAASTEGILRQGFNEVNSMKVAQVLYQELDIGAVAITDREKLLAFTGIGDDHHIPGKPISSTYTLKAIETGEVVYADGNEVPYRCSLHPQCKLGSTLVIPLRGENQRVMGTIKLYEAKNRLFSSINRTLGEGIAQLLSAQILAGQYERQKAMLTQSEIKLLHAQVNPHFLFNALNTIKAVSRRDSEQASQLVQYLSTFFRKNLKRPSEFVTLADEIEHVNAYLQIEKARFQSRLQVNIAIPQELSQQQLPAFTLQPIVENAIKHGTSQLLDTGRVAISARREGQHLMLEIEDNAGLYQPVTNASGLGMNLVDKRLRERFGDDYGISVACEPDSYTRITLRLPWRDEA
812703..812831                     hypothetical protein; SbBS512_E0867                                                  N/A                 ShigellaboydiiCDC308394MSTITQNRLAKIKSPYKCTKNGQNYLVRKTASKVKPGPREQG
813906..814154                     PHAGE_Entero_YYZ_2008_NC_011356: putative DNA damage-inducible protein; SbBS512_E0870; phage(gi209427797)     3.90e-53            ShigellaboydiiCDC308394MRVEICIAKEKITKMPNGAVDALKEELTRRISKRYDDVEVIVKATSNDGLSVTRTADKDSAKTFVQETLKDTWKSADEWFFH
814471..815016                     PHAGE_Strept_9871_NC_031069: hypothetical protein; SbBS512_E0871; phage(gi100019)     1.95e-08            ShigellaboydiiCDC308394MNISELKKCIHYEVIGCKRPFSWRKAIVRAIKHRRSRYLFWWRIAKYLFDKGGYRRKIAGKIERFILDKYNVTVPLTVNIGKGFDISYLNGVVIGHKVTIGENCSIKPGVTIGLRGEFNDMDIVIGNNVTIGCNATILGGKVHIGNNVKIGAHALVLHDIPDDSTFITKFHSEIIYNSSHT
complement(815027..815599)         PROPHAGE_Escher_MG1655: Qin prophage; predicted tail fibre assembly protein; SbBS512_E0872; phage(gi16129505)     8.74e-116           ShigellaboydiiCDC308394MAFRMSEQARTIKIYNLLAGTNEFIGEGDAYIPPHTGLPANSTDIAPPDIPAGFVAVFNSDEASWHLVEDHRGKTVYDVASGDALFISELGSLPGNVTWLSPEGEFQKWNGTAWVKDTEAEKLFRIREAEEKKTRLIQEATDNITILQDAINFEMATDEEVSMLSSWKKYRVLVSRIDINTAPDIVWPEL
complement(815599..816924)         PHAGE_Entero_9g_NC_024146: side tail fiber; SbBS512_E0873; phage(gi640885143)        6.96e-159           ShigellaboydiiCDC308394MAASPNYATSVNIHWDCTANASVSVYTSPTYSASKPSSVTYGVVYTMYSSHQKPTPSDIGALPTTGGTISGPLFVTDGITGALKGNADTATKLAAAPKINGVKFDGSADINLTPENIGAFARRSTGAYADSDGAVPWNAESGAYNVTRSGDSYILVNFYTGVGSCRTLQMKAHYRNGGLFYRSSRDGYGFEEGWAEVYTSKNLPPESYPVGAPIPWPSDTVPSGYALMQGQTFDKSAYPKLAAAYPSGVIPDMRGWTIKGKPASGRAVLSQEQDGIKSHTHSASASSTDLGTKTTSSFDYGTKSTNNTGAHTHSLSGSTGSAGVHTHGNGIRWPRGGGSALAFYDGGGFTYVQNSQYQVSPGTSSRRSYYQRIQTQSAGAHTHSLSGTAASSGAHAHTVGIGAHTHSVAIGSHGHTITVNAAGNAENTVKNIAFNYIVRLA
complement(817657..818175)         PHAGE_Salmon_SJ46_NC_031129: RecA-like recombination protein; SbBS512_E0875; phage(gi100035)     6.02e-35            ShigellaboydiiCDC308394MEDASLTTKGVVKLSSAVDSTSESLAATPKAVKAANDNANSRVPSNRKVNGKALTADITLTPKDIGTLNSVTMSFSGGAGWFKLATVTMPQASSIVYIALIGGAGYNVGSPHQAGISELVLRAGNGNPKGITGALWKRTAVGLTNFAWINTSGDTYDIYVEIGNYAVMTPTY
818300..819049                     PHAGE_Entero_lambda_NC_001416: hypothetical protein; SbBS512_E0878; phage(gi9626267)     2.82e-16            ShigellaboydiiCDC308394MDAVVALLFAADACLVASSFEADADDADDAAELADDAAAVFEDSALVSDAFAFVSDVFAAEADLAAALACSVASPAFVVAVEADDAELSADFPAAVALAEACPALVDAALADDAAAVFEPAAAEALCSAAVSEDLAFVSDVFAAFAEFAAAVAEEAALLALEAAFVSDDFAASFEADASRAEVAASDAFVVAVDAEVAADCCDAAAFVSDVFAAPALVAAALFEDSAAAALFNASVAFVDAVPALEDAD
complement(819698..820297)         PHAGE_Entero_cdtI_NC_009514: putative Lom-like outer membrane protein; SbBS512_E0879; phage(gi148609401)     2.63e-125           ShigellaboydiiCDC308394MRKLCAVILSAVVWQVAAATPASAAEHQSTLSAGYLHASTNVPGSDDLNGINVKYRYEFTDALGLITSFSYANAEDEQKTRYSDTRWHEDSVRNRWFSVMAGPSVRVNEWFSAYAMAGVAYSRVSTFSGDYLRVTDNKGKTHDVLTGSDDGRHSNTSLAWGAGVQFNPTESVAVDLAYEGSGSGDWRTDAFIVGIGYRF
complement(820365..823838)         PHAGE_Entero_DE3_NC_042057: recombination endonuclease subunit; SbBS512_E0880; phage(gi100054)     0.0                 ShigellaboydiiCDC308394MGKGGGKAHTPREAKDNLKSTQMMSVIDAIGEGPIEGPVKGLQSILVNKTPLTDTDGNPVIHGVTAVWRAGEQEQTPPEGFESSGAETGLGVEVTKAKPVTRTITSANIDRLRVTFGVQSLVQTTSKGDRNPSSVRILIQLQRNGRWVTEKDVTINGKTTSQFLASVILDNLPPRPFNIRMVRETADSTTDQLQNRTLWSSYTEIIDVKQCYPNTAIVGMQVDAEQFGGQQMTVNYHIRGRIIQVPSNYDPEKRTYSGIWDGSLKPAYSNNPAWCLWDMLTHPRYGMGKRLGAADVDKWALYAIGQYCDQTVPDGFGGTEPRMTFNAYLAQQRKAWDVLSDFCSAMRCMPVWNGQMLTFVQDRLSDVVWPYTNSDVVVDDNGVGFRYSFSALKDRHTAVEVNYTDPQNGWQTSTELVEDPEAILRYGRNLLKMDAFGCTSRGQAHRAGLWVIKTELLETQTVDFTLGSQGLRHTPGDIIEICDNDYAGTLTGGRVLSIDAATRTLTLDREVTLPETGTSAVNLINGSGKPVSVDITAHPAPDRIQVSTLPDGVETYGVWGLSLPSLRRRLFRCVSVRENTDGTFAITAVQHVPEKEAIVDNGARFEPQSGSLNSVIPPAVQHLTVEVSAADGQYLAQAKWDTPRVVKGVRFSLRLTSGSGEDSRLVTTAITADTEHRFSGLPLGEYTLTVRAINSYGQQGEPATTTFRIAAPAAPSRIELTPGYFQITATPHLAVYDPTVQFEFWFSEKRIADIRQVETAARYLGSALYWIAASINIKPGHDYYFYIRSVNTVGKSAFVEAVGRASDDVEGYLDFFKGEIGKTHLAQELWTQIDNGQLAPDLAEIRTSITNVSNEITQTVNKKLENQSAAIQQIQKVQVDTNNNLNSMWAVKLQQMQDGRLYIAGIGAGIENTPAGMQSQVLLAADRIAMINPANGNTKPMFVGQGDQIFMNEVFLKYLTAPTITSGGNPPAFSLTPDGRLTAKNADISGNVNANSGTLNNVTINENCRVLGKLSANQIEGDLVKTVGKAFPRDSRAPERWPSGTITVRVYDDQPFDRQIVIPAVAFSGAKHEKEHTDIYSSCRLIVRKNGAEIYNRTALDNTLIYSGVIDMPAGHGHMTLEFSVSAWLVNNWYPTASISDLLVVVMKKATAGITIS
complement(824180..824761)         PHAGE_Stx2_c_1717_NC_011357: putative tail component; SbBS512_E0881; phage(gi209447195)     1.69e-135           ShigellaboydiiCDC308394MNTAAEAIRALSMQMPGFRRQMNEGWYQIRIAGDDTAPEAVYARLHEQLGEGTVIHIVPRLAGAGKGGLQIVLGAAAIVGSFFTAGASMALWGSALAAGGFSATTMLFSLGASMILGGVAQMLAPKAKTPDYRATDNGRQNTYFSSLDNMIAQGNPMPVPYGEMLVGSRRISQDISTRDEGGGGKVVVIGRQG
complement(825421..826119)         PHAGE_Entero_DE3_NC_042057: hypothetical protein; SbBS512_E0883; phage(gi100051)     2.92e-135           ShigellaboydiiCDC308394MQDIREERLNESVKSEQSPRVVLWEIDLTVQGGERYFFCNELNEKGEPVTWQGRKYEAYPIDGSGFEMNGRGSSARPSLTVSNLFGLVTGMAEDLQSLVGATVVRRRVYARFLDAVNFVAGNPEADPEQELSDRWVVEQMSQLTAMTASFVLATPTETDGALFPDRIMLANTCMWTYRSDECGYTGGAVADEFDKPTTDIRKDRCSKCMRGCELRRNVGNFGGFLSINKLSQ
complement(826119..826448)         PHAGE_Entero_DE3_NC_042057: hypothetical protein; SbBS512_E0884; phage(gi100050)     1.05e-58            ShigellaboydiiCDC308394MKTFRWKVKPDMEVNSRPSVREVRFGDGYSQRMAAGLSADLKTYRVTLSVTREEARHLEEFLAEHGGWKAFLWTPPYAYRQIKVTCAGWSARVGMLRVEFSAEFKQVVN
complement(826445..829057)         PHAGE_Entero_DE3_NC_042057: RNA polymerase sigma factor; SbBS512_E0885; phage(gi100049)     0.0                 ShigellaboydiiCDC308394MSQPAGDLVIDLSLDAARFDEQMARVRRHFSSLEADARKTASTVEQGLSRQALAAQKAGISVGQYKAAMRTLPAQFTDIVTQLAGGQNPFLIMLQQGGQISDSFGEPLSLLTLLKEELLGIRDASESSEESLSDTANALAENARNAGELGRFMSVVRVAAGGGVAVLAALAAAAWQAEQADRALLRSLILTGGAAATTTAELWKMAGVISDEAGGGIRQAAENLARLAESGKYTAGQLRIMGETSQRWLQTVGDDAGKVEKAFEGIAADPVKALASLNQQYNFLSVSQLRHIDELERTKGKQAAVTEAMSLFADVMNARLEQLDKAATPVEKIWDDVKTWTSDAWAWIGDHTLGALSLITDVVAGTVEQVKLLLVQGDLALAEFIQSAWETTKNVPGVGALFGELAEENRVFIEKTKRDELALRKSIAERDARIRQGEMGYINRSRATGVSKGLGQQEAVSRLAEELTGKKHTSPKTRSAGEREEEQAREALLALEAELRTLEKHSGANEKISRQRRDLWKAESQYAVLKEAATKRQLSWQEKSLLAHEKETLEYKRQLAELGDKIEHQKRLNELAQQAARFEQQQSAKQAAISAKARGLTDRQAQRESEEQRLREVYGDNPAALAKATSALKNTWSAEEQLRGSWMAGMKSGWGEWAESATDSFSQVKSVATQTFDGIAQNMAAMLTGSEQNWRGFTRSVLSMLTEIFLKQAMVGIVGRIGSAIGGAFGGGASASTGTAIQAAAANFHFATGGFTGTGGKYEPAGIVHRGEFVFTKEATSRIGVGNLYRLMRGYAEGGYVGGAGSPAQMRRAEGINFNQNNHVVIQNDGPNGQAGPQLMKAVYEMARKGAQDELRLQLRDGGLLSGSGR
complement(829246..829869)         PHAGE_Entero_DE3_NC_042057: dsDNA binding protein; SbBS512_E0886; phage(gi100047)     1.51e-28            ShigellaboydiiCDC308394MFLKTEQFEYNGVSVTLSELSALQRFDYIKFVSDAEQQETTKHDVVHINQRYLETASLLVAMSLWHTHSLKGTLASPETEMQQIRREVMLGWPADALNQATNRVLYLSGMLDNRHDADPEQTGKAEATEPVTCPETGARDGETRLARHACRDDIHRICRLATFLLHALFSGYPTGRSFFRADVRRTQPVFWRSGYASGGFQSACSSV
complement(829883..830635)         PHAGE_Entero_DE3_NC_042057: late promoter transcription; SbBS512_E0887; phage(gi100046)     1.02e-136           ShigellaboydiiCDC308394MATPNPLEPVKGAGTTLWVYNGKGDAYANPLSDDDWQRLAKVKDLTPGEMTAESYDDNYLDDEDADWNATGQGQKSAGDTSFTLAWKPGEEGQKGLIGWFESGDVRAYKIRFPNGTVNVFRGWVSSIGKAVTAKEVITRTVKVTNVGKPSVAEERSKITPVSAIKVTPTSGTVAKGKTTTLTVSFEPESATDKTFRAVSADPSKATISVKDMTITVNGVATGKVQILVVSGNGQFAAVAEVTVTDAGAAG
complement(830643..831038)         PHAGE_Entero_DE3_NC_042057: loader of DNA helicase; SbBS512_E0888; phage(gi100045)     2.21e-73            ShigellaboydiiCDC308394MKHTDIRAAVLDALEQHEHGATLFDGRPVVFDEEDFPAIAVYLTDAEYTGEELDADTWRATLHIEVFLPAQVPDSELDQWMESRIYPAMTAIPALAGLITTMVTQGYEYRRDDDMALWSSADLTYSITYEM
complement(831035..831610)         PHAGE_Entero_DE3_NC_042057: ssDNA binding protein; SbBS512_E0889; phage(gi100044)     1.16e-66            ShigellaboydiiCDC308394MAIKGLDQAIDNLSRVRKNAIPAASAMTINRVATTAINQSSSQVARETRVRRKLVKERSRLKRATVRNPNARIIVNRGDLPVIKLGIRMLGRRPNSILKAGQHRYQRAFIQRLNNGRWHVMQRLPQARYEEGNDDKGRKKRNRLPIQVVKIPMAAPLKQAFDENVDRIRRERLPKELAYALKQQLRIAIKR
complement(831626..831979)         PHAGE_Entero_DE3_NC_042057: RNA polymerase binding protein; SbBS512_E0890; phage(gi100043)     1.22e-52            ShigellaboydiiCDC308394MRDFQNAFDAALAGVDSTIVEVMGLCAQFTSGAQRGSEVQGVFDDPESLGFAGGGVRIEGSSPSLFVRTDTVRAVRRGDTLTINGEMFWVDRISPDDGGSCYLWLNRGQPPAVNRRR
complement(831972..832355)         PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage accessory DNA packaging protein; Lambda FI homolog; SbBS512_E0891; phage(gi169257229)     1.71e-08            ShigellaboydiiCDC308394MATKEENLNRLRQLAGLLGREADMSGSAADIAQRVSEWEEELAVSPEGIMHSDESGADQNHTDDGEQLNNTDATDDVKAVRVRKCLHVMGYCPETGRPVELTYRGMRVMVPSPLATAMIQHGTAEHA
complement(832407..833435)         PHAGE_Entero_DE3_NC_042057: clamp-loader subunit; SbBS512_E0892; phage(gi100041)     3.79e-149           ShigellaboydiiCDC308394MGLFTTRQLLGYTEQKVKFRALFLELFFRRTVNFHTEEVMLDKITGKTPVAAYVSPIVEGKVLRHRGGETRVLRPGYVKPKHEFNYQQAVERLPGEDPAQLNDPAYRRLRIITDNLKQEEHAIVQVEEMQAVNAVLYGKYTMEGDQFDTVEVDFGRSEGNNIEQADGKKWSEQDRDTFDPTHDIDLYCDQTSGLVNIAIMDGTVWRLLNGFKLFREKLDTRRGSNSQLETAVKDLGAVVSFKGYYGDLAIVVAKTSYVAEDGTEKRYLPEGTLVLGNTAAEGIRCYGAIQDAQALSEGVVASSRYPKHWLTVGDPAREFTMTQSAPLMVLPDPDEFVVVQVK
complement(833493..833840)         PHAGE_Entero_DE3_NC_042057: clamp-loader subunit; SbBS512_E0893; phage(gi100040)     4.74e-29            ShigellaboydiiCDC308394MVTKTITEQRAEVRIFAGNDPAHTATGSSGISSATPALTPLMLDEATGKLVVWDGQKAGSAVGILVLPLEGTETVLTYYKSGTFATEAIRWPDSGDEHKKANAFAGTALSHAALP
complement(833877..835382)         PHAGE_Entero_DE3_NC_042057: RegA; SbBS512_E0894; phage(gi100039)                     2.36e-132           ShigellaboydiiCDC308394MRRNLSHIIAAAFNEPLLLEPAYARVFFCALGREMGAASLSVPQQQVQLDAPGMLAETDEYMAGGKRPARVYRVVNGIAVLPVTGTLVHRLGGMRPFSGMTGYDGIVTCLQQAMADSQVRGILLDIDSPGGQAAGVFDCADMIYRLRQQKPVWALCNDTACSAAMLLASACSRRLVTQTSLIGSIGVMMSHVSYAGHLAQAGVDITLIYSGAHKVDGNQFEALPAEVRQDMQQRIDAARRMFAEKVAMFTGLSVDAVTGTEAAVFEGQSGIEAGLADELINASDAISVMATALNSNVRGGTMPQLTATEAAVQENQRVMGILTCQEAKGREQLATMLAGQQGMSVEQARAILAAAAPQQPVASAQSEADRIMACEEANGREQLAATLAAMPEMTVEKARPILAAAPLADAGPSLRDQIMALDEAKGAEAQAEKLATCPGMTVENARAVLAAGSGKAEPVSASTTALFEHFMANHSPAAVRGGVSQTSADGDADVKMLMAMP
complement(835372..836145)         PHAGE_Entero_DE3_NC_042057: hypothetical protein; SbBS512_E0895; phage(gi100038)     1.71e-105           ShigellaboydiiCDC308394MYAATIESDLDTEKAFEYIAGAPQGQKDNPLINILDKFSTWYDTNSVMLGGVKIPHLFPGDDLKLQTAQDSDNGFSALEQALLRYIAAGLGVSYEQLSRDYSKVSYSSARASANESWRYFMGRRKFIASRLATQMFSCWLEEALLRGIIRPPRARFDFYQARSAWSRAEWIGAGRMAIDGLKEVQESVMRIEAGLSTYEKELALMGEDYQDIFCQQVRESAEREKAGLSRPVWIAQAYQQQIAESRRPEEETTPRET
complement(836948..837229)         hypothetical bacteriophage protein; SbBS512_E0896                                    N/A                 ShigellaboydiiCDC308394MTESEILRLIRRACGISKQHDEQATQPDSVTADNYVRVVAEVMRRDGIELNGVDMRNIRTRVLELLAYRRRSQQRRESAKNTYQWKKPERLRR
complement(837353..838171)         PROPHAGE_Escher_CFT073: transposase insF; SbBS512_E0897; phage(gi26249410)           0.0                 ShigellaboydiiCDC308394MCQVFGVSRSGYYNWVQHEPSDRKQSDERLKLEIKVAHIRTRETYGTRRLQTELAENGIIVGRDRLARLRKELRLRCKQKRKFRATTNPNHNLPVAPNLLNQTFAPTAPNQVWVADLTYVATQEGWLYLAGIKDVYTCEIVGYAMGERMTKELTGKALFMALRSQRPPAGLIHHSDRGSQYCAYDYRVIQEQSGLKTSMSRKGHCYDNAPMESFWGTLKNESLSHYRFNNRDEAISVIREYIEIFYNRQRRHSRLGNISPAAFREKYHQMAA
complement(838207..838509)         PROPHAGE_Xantho_33913: ISxac3 transposase; SbBS512_E0898; phage(gi21231087)          2.13e-12            ShigellaboydiiCDC308394MSRKNQRYSKEFKAEAVRTVLENQLSISEGASRLSLPEGTLGQWVTAARKGLGTPGSRTVAELESEILQLRKALNEARLERDILKKATAYFAQESLKNTR
complement(839307..841397)         PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; SbBS512_E0899; phage(gi100064)     4.77e-07            ShigellaboydiiCDC308394MRITTLASVVIPCLGFSASSIATAEDVMIVSASGYEKKLTNAAASVSVISQEELQSSQYHDLAEALRSVEGVDVESGTGKTGGLEISIRGMPASYTLILIDGVRQGGSSDVTPNGFSAMNTGFMPPLAAIERIEVIRGPMSTLYGSDAMGGVVNIITRKNADKWLSSVNAGLNLQESNKWGNSSQFNFWSSGPLVDDSVSLQVRGSTQQRQGSSVTSLSDTAATRIPYPTESQNYNLGARLDWKASEQDVLWFDMDTTRQRYDNRDGQLGSLTGGYDRTLRYERNKISAGYDHTFTFGTWKSYLNWNETENKGRELVRSVLKRDKWGLAGQPRELKESNLILNSLLLTPLGESHLVTVGGEFQSSSMKDGVVLASTGETFRQKSWSVFAEDEWHLTDALALTAGSRYEHHEQFGGHFSPRAYLVWDVADAWTLKGGVTTGYKAPRMGQLHKGISGVSGQGKTNLLGNPDLKPEESVSYEAGVYYDNPAGLNANVTGFMTDFSNKIVSYSINDNTNSYVNSGKARLHGVEFAGTLPLWSEDVTLSLNYTWTRSEQRDGDNKGAPLSYTPEHMVNAKLNWQITEEVASWLGARYRGKTPRFTQNYSSLSAVQKKVYDEKGEYLKAWTVVDAGLSWKMTDALTLNAAVNNLLNKDYSDVSLYSAGKSTLYAGDYFQTGSSTTGYVIPERNYWMSLNYQF
complement(841747..841896)         nitrite extrusion protein 2; SbBS512_E0900                                           N/A                 ShigellaboydiiCDC308394MVRRLRFSGPKTSIICTPMTSLKTSIKTITYLSDTGCLEIQGASLVMTL
842176..843081                     PROPHAGE_Escher_MG1655: IS2 transposase TnpB; SbBS512_E0901; phage(gi16132094)       0.0                 ShigellaboydiiCDC308394MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLEI
complement(843804..844622)         PROPHAGE_Escher_CFT073: transposase insF; SbBS512_E0902; phage(gi26249410)           0.0                 ShigellaboydiiCDC308394MCQVFGVSRSGYYNWVQHEPSDRKQSDERLKLEIKVAHIRTRETYGTRRLQTELAENGIIVGRDRLARLRKELRLRCKQKRKFRATTNPNHNLPVAPNLLNQTFAPTAPNQVWVADLTYVATQEGWLYLAGIKDVYTCEIVGYAMGERMTKELTGKALFMALRSQRPPAGLIHHSDRGSQYCAYDYRVIQEQSGLKTSMSRKGHCYDNAPMESFWGTLKNESLSHYRFNNQDEAISVIREYIEIFYNRQRRHSRLGNISPAAFREKYHQMAA
complement(844658..844960)         PROPHAGE_Xantho_33913: ISxac3 transposase; SbBS512_E0903; phage(gi21231087)          1.20e-12            ShigellaboydiiCDC308394MSRKNQRYSKEFKAEAVRTVPENQLSISEGASRLSLPEGTLGQWVTAARKGLGTPGSRTVAELESEILQLRKALNEARLERDILKKATAYFAQESLKNTR
845116..845385                     PHAGE_Escher_P13374_NC_018846: hypothetical protein; SbBS512_E0904; phage(gi410491644)     9.40e-35            ShigellaboydiiCDC308394MSEIKSLVTAEAVKEVLRSEEVRSALKQQLRQNLEARLDAEVDSILDELLGAPTVPEPEGIADDSAVSDGVGSQPDGSEGPQPDGEMMM
complement(846020..846280)         conserved hypothetical protein; SbBS512_E0905                                        N/A                 ShigellaboydiiCDC308394MRAGNGYLAVTHSRPDKLAFLQASGEQAQTISISPQDFNHVTPSATEDEQVTGEGIIIQHMLYLFTQPVERLTHIGYPSNEPDAGA
846386..847978                     PHAGE_Stx2_c_1717_NC_011357: transposase; SbBS512_E0906; phage(gi209447153)          0.0                 ShigellaboydiiCDC308394MNQKYLIRIAELECQLRQKDQQLSLVEETEAFLRSALARAEEKIEEDEREIEHLRAQIEKLRRMLFGTRSEKLRREVEQAEALLKQREQDSDRYSGREDDPQVPRQLRQSRHRRPLPEHLPREINRLEPEESCCPECGGELDYLGEVSAEQLELVSSALKVIRTERVKKACTKCDCIVEAPAPSRPIERGIAGPGLLARMLTGKYCEHLPLYRQSEIFARQGVELSRALLSNWVDACCQLMTPLNDALYRYVMNSRKVHTDDTPVKVLAPGRKKAKTGYIWTYVRDDRNAGSPEPPAVWFAYSPDHQGKHPEQHLSPFRGILQADAFNGYDRLFSAEREGGALTEAGCWAHARRKVHDVYISTKSATAEEALKLIGELYAIEHEIRGLPVSERLAVRQMQSKPLLTSLYKLMQEKEHTLSKKCRLRDAFRYIRKHWVALCNFSDDGLAEADNNAAERALRAVCLGKKNFMFFGSDHGGERGALLYGLIGTCRLNGIDPEAYLRYILSVLPEWPSNRVDELLPWNVALTNK

#### region 4 ####
858500..859405                     PROPHAGE_Escher_MG1655: IS2 transposase TnpB; SbBS512_E0920; phage(gi16132094)       0.0                 ShigellaboydiiCDC308394MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLEI
860544..860927                     putative membrane protein; SbBS512_E0921                                             N/A                 ShigellaboydiiCDC308394MTGSSNVEKCDFYHIIVLSLNFPDYLKMEYGSTKMEERLSRSPGGKLALWAFYTWCGYFVWAMARYIWVMSLIPDAPVSGFESDLGSTAGKWLGALVGFLFMALVGALLGSIAWYTRPRPARSRRYE
860967..861662                     putative metal-dependent phosphohydrolase; SbBS512_E0922                             N/A                 ShigellaboydiiCDC308394MDLQHWQAQFENWLKNHHQHQDAAHDVCHFRRVWATAQKLAADDDVDMLVILTACYFHDIVSLAKNHPQRQRSSILAAEETRRLLREEFEQFPAEKIEAVCHVIAAHSFSAQIAPLTTEAKIVQDADRLEALGAIGLARVFAVSGALGVALFDGEDPFAQHRPLDDKRYALDHFQTKLLKLPQTMQTARGKQLAQHNAHFLVEFMAKLSAELAGENEGVDHKVIDAFSPAG
861729..863147                     PHAGE_Burkho_KL3_NC_015266: gp47; SbBS512_E0923; phage(gi327198092)                  6.50e-126           ShigellaboydiiCDC308394MQENISVTDSYSTGNAAQAMLEKLLQIYDVKTLVAQLNGVGENHWSAAILKRALANDSAWHRLSEKEFAHLQTLLPKPPAHHPHYAFRFIDLFAGIGGIRRGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIRDITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAGVSKKNSLGRAHGFACDTQGTLFFDVVRIIDARRPAMFVLENVKNLKSHDQGKTFRIIMQTLDELGYDVADAEDNGPDDPKIIDGKHFLPQHRERIVLVGFRRDLNLKADFTLRDISECFPAQRVTLAQLLDPMVEAKYILTPVLWKYLYRYAKKHQARGNGFGYGMVYPNNPQSVTRTLSARYYKDGAEILIDRGWDMAKGEKDFDDPLNQQHRPRRLTPRECARLMGFEAPGEAKFRIPVSDTQAYRQFGNSVVVPVFAAVAKLLEPKIKQAVALRQQEAQHGRRSR
863128..863598                     PHAGE_Burkho_KL3_NC_015266: gp46; SbBS512_E0925; phage(gi327198091)                  2.81e-42            ShigellaboydiiCDC308394MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGSPDFVVDEYRCVIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTERLEEWICGEGASAQIDTQGIHLLA
complement(863587..864507)         carboxylate/amino acid/amine transporter; SbBS512_E0924                              N/A                 ShigellaboydiiCDC308394MRFRQLLPLFGALFALYIIWGSTYFVIRIGVESWPPLMMAGVRFLAAGILLMAFLLLRGHKLPPLRPLLNAALIGLLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRLFGIKTRKLEWVGIAIGLAGIIMLNSGGNLSGNPWGAILILIGSISWAFGSVYGSRITLPVGMMAGAIEMLAAGVVLMIASMIAGEKLTALPSLSGFLAVGYLALFGSIIAINAYMYLIRNVSPALATSYAYVNPVVAVLLGTGLGGETLSKIEWLALGVIVFAVVLVTLGKYLFPAKPVVAPVIQDASSE
complement(865166..865357)         IS1 transposase orfA; SbBS512_E0928                                                  N/A                 ShigellaboydiiCDC308394MLAWLPFPSDVLPAPLLKAWCVTAKALPDISAISALIAVKHGNYSSLTPPLSPVRTRKSLIWP
complement(865383..865739)         PHAGE_Entero_YYZ_2008_NC_011356: putative tail protein; SbBS512_E0929; phage(gi209427782)     3.96e-75            ShigellaboydiiCDC308394MSALYERSQLTQVMISSAPATAETMDKAEYLRLDCTIKEVQFTAGQKQDIDVTTLCSTEQENINGLGASSEISMSGNFYLNQAQNALRDAYDNDALYAFKVLFPSGKGFKFLVMLPTY
complement(865805..866149)         PHAGE_Entero_YYZ_2008_NC_011356: putative prophage structural protein; SbBS512_E0930; phage(gi209427781)     4.44e-78            ShigellaboydiiCDC308394MTEADLYPHLAHLAGGQVYPYVAPLLDGRPSVALPWVVFSLISSVSADVMGGQAESSVSVQIDVYAGTVTQARQIRQDAREAIMLLAPGSVSEMQDYIPENRCYRATLEFQVTV
complement(866146..866592)         PHAGE_Entero_YYZ_2008_NC_011356: hypothetical protein; SbBS512_E0931; phage(gi209427780)     8.69e-101           ShigellaboydiiCDC308394MIEILLDFSGLEDISRDLQLLSGAENNRVLREATRAGANVLKEEVVSRTPVRRGKLRRNVVILSRRSRDGGMESGVHIRGVNPDTGNSDNTMKADNPRNAFYWRFVEMGTVNMPPHPFVRPAFDVRSEQAAQVAIARMNRAIDEVLRR
complement(866589..866939)         PHAGE_Entero_YYZ_2008_NC_011356: putative head-tail adaptor; SbBS512_E0932; phage(gi209427779)     2.66e-78            ShigellaboydiiCDC308394MAISAGRLTQMISVLNPVLTRNAAGEMTEEWVSCGKIHADIRGRSSRERMQSGAEMAQAEIRIWVRGQSGREITAASRLHVLSGPWRDRILNVVGLPVPDATGGRLEILCRLGGEK
complement(866949..867275)         PHAGE_Entero_YYZ_2008_NC_011356: hypothetical protein; SbBS512_E0933; phage(gi209427778)     1.51e-70            ShigellaboydiiCDC308394MTALLTLEEIKAHLRVDHDADDDMLMDKVRQATAVLLAYIQGSRDKVIREDGELIQGEALTRMKGAAMRLTGMLYRNPDLAEREELLQGELPFSVSVLIYDLRCPTVL
complement(869538..869759)         PHAGE_Entero_YYZ_2008_NC_011356: hypothetical protein; SbBS512_E0936; phage(gi209427801)     1.17e-47            ShigellaboydiiCDC308394MAKIRYLQGTHDARAGDIRDVAQPCAEVLVRLGKAEYITVRRPAGQKKKRDAEHGECGTFYSEPEKTRNQDVT

#### region 5 ####
913123..913134                     attL                                                                                 N/A                 GGGACTTGAACC
complement(922170..922613)         PHAGE_Salmon_118970_sal3_NC_031940: baseplate subunit; SbBS512_E0995; phage(gi100105)     1.74e-48            ShigellaboydiiCDC308394MLSLKWEQIGNDGIFIQQGKTGKKQIKAWSPRLQAAIEKAKQLPTSAYVISNQYGNRYMYKGFNEMWVEARNRAGKISGILTDFTFHDLKAKGISDYEGSSRDKQLFSGHKTEGQVLIYDRKVKVSPTLDVPLPENIPSNSTCDFCH
922667..922858                     IS1 transposase orfA; SbBS512_E0996                                                  N/A                 ShigellaboydiiCDC308394MLAWLPFPSDVLPAPLLKAWCVTAKALPDISAISALIAVKHGNYSSLTPPLSPVRTRKSLIWL
922869..923372                     PHAGE_Shigel_SfIV_NC_022749: IS1 transposase B; SbBS512_E0997; phage(gi557307573)     5.18e-110           ShigellaboydiiCDC308394MSRQCTHYGRWPQHGFPSLKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTLATLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHYLNIKHYQ
923694..923996                     PROPHAGE_Xantho_33913: ISxac3 transposase; SbBS512_E0998; phage(gi21231087)          2.13e-12            ShigellaboydiiCDC308394MSRKNQRYSKEFKAEAVRTVLENQLSISEGASRLSLPEGTLGQWVTAARKGLGTPGSRTVAELESEILQLRKALNEARLERDILKKATAYFAQESLKNTR
924032..924850                     PROPHAGE_Escher_CFT073: transposase insF; SbBS512_E0999; phage(gi26249410)           0.0                 ShigellaboydiiCDC308394MCQVFGVSRSGYYNWVQHEPSDRKQSDERLKLEIKVAHIRTRETYGTRRLQTELAENGIIVGRDRLARLRKELRLRCKQKRKFRATTNPNHNLPVAPNLLNQTFAPTAPNQVWVADLTYVATQEGWLYLAGIKDVYTCEIVGYAMGERMTKELTGKALFMALRSQRPPAGLIHHSDRGSQYCAYDYRVIQEQSGLKTSMSRKGHCYDNAPMESFWGTLKNESLSHYRFNNRDEAISVIREYIEIFYNRQRRHSRLGNISPAAFREKYHQMTA
complement(924891..925127)         conserved hypothetical protein; SbBS512_E1000                                        N/A                 ShigellaboydiiCDC308394MADALPEAVLRRSLGLRAEKIRSMYRESDIVPGEQTATSILKQRTKNLALLPHAHQQQNPPQEETVVSIAVDPESPAQ
complement(925233..926771)         PHAGE_Stx2_c_1717_NC_011357: transposase; SbBS512_E1001; phage(gi209447153)          0.0                 ShigellaboydiiCDC308394MSSSLPDDINALKRLLAEQEALNRALLEKLNEREREIDHLQAQLDKLRRMNFGSRSEKVSRRIAQMEADLKALQKESDTLTGRVDDPAVQRPLRQTRTRKPFPESLPRDEKRLLPAASCCPECGGSLSYLGEDAAEQLELMRSVFRVIRTVREKHACTQCDAIVQAPAPSRPIERGIAGPGLLARVLISKYAEHTPLYRQSEMYGRQGVELSRSLLSGWVDACCRLLSPLEEALQDYVLTDGKLHADDTPVPVLLPGNKKTKTGRLWTYVRDDRNAGSTLAPAVWFAYSPDRKGIHPQTHLAGFSGVLQADAYAGFNELYRDGRITEAACWAHARRKIHDVHVRTPSALTEEALKRIGELYAIEAEIRGMTAEQRLAERQLKTKPLLKSLESWLREKMKTLSRHSELAKAFAYALNQWPALTYYADDGWAEADNNIAENALRMVSLGRKNYLFFGSDHGGERGALLYSLIGTCKLNGVEPESYLRYVLDVIADWPINRVGELLPWRVALPTE
complement(926820..927167)         PHAGE_Stx2_c_1717_NC_011357: transposase; SbBS512_E1002; phage(gi209447152)          2.10e-76            ShigellaboydiiCDC308394MIPLPSGTKIWLVAGITDMRNGFNGLAAKVQTTLKDDPMSGHVFIFRGRNGSQVKLLWSTGDGLCLLTKRLERGRFAWPSARDGKVFLTPAQLAMLLEGIDWRQPKRLLTSLTML
complement(927592..928098)         PHAGE_Entero_mEp460_NC_019716: hypothetical protein; SbBS512_E1003; phage(gi428782365)     2.78e-45            ShigellaboydiiCDC308394MRVLLRPVLVPELGLVVLKPGRESMPVFHNTRVLVEPEPKSMRNLPSGVVPAVRQPLVEDKTLLPFFSNARVIRAAGGAGALSDWLLRHIKSCQWPHGDYNHSETVIHRYGTGAMVLCWHCDNQLRDQTSESLEQLAHQNLSAWMIDVIGHAISVSVQPEPSGQNLTN
930216..930563                     PHAGE_Stx2_c_1717_NC_011357: transposase; SbBS512_E1005; phage(gi209447152)          2.10e-76            ShigellaboydiiCDC308394MIPLPSGTKIWLVAGITDMRNGFNGLAAKVQTTLKDDPMSGHVFIFRGRNGSQVKLLWSTGDGLCLLTKRLERGRFAWPSARDGKVFLTPAQLAMLLEGIDWRQPKRLLTSLTML
930612..932150                     PHAGE_Stx2_c_1717_NC_011357: transposase; SbBS512_E1006; phage(gi209447153)          0.0                 ShigellaboydiiCDC308394MSSSLPDDINALKRLLAEQEALNRALLEKLNEREREIDHLQAQLDKLRRMNFGSRSEKVSRRIAQMEADLKALQKESDTLTGRVDDPAVQRPLRQTRTRKPFPESLPRDEKRLLPAASCCPECGGSLSYLGEDAAEQLELMRSVFRVIRTVREKHACTQCDAIVQAPAPSRPIERGIAGPGLLARVLISKYAEHTPLYRQSEMYGRQGVELSRSLLSGWVDACCRLLSPLEEALQDYVLTDGKLHADDTPVPVLLPGNKKTKTGRLWTYVRDDRNAGSTLAPAVWFAYSPDRKGIHPQTHLAGFSGVLQADAYAGFNELYRDGRITEAACWAHARRKIHDVHVRTPSALTEEALKRIGELYAIEAEIRGMTAEQRLAERQLKTKPLLKSLESWLREKMKTLSRHSELAKAFAYALNQWPALTYYADDGWAEADNNIAENALRMVSLGRKNYLFFGSDHGGERGALLYSLIGTCKLNGVEPESYLRYVLDVIADWPINRVGELLPWRVALPTE
932201..932506                     PHAGE_Entero_mEp460_NC_019716: putative exonuclease; SbBS512_E1007; phage(gi428782342)     2.65e-39            ShigellaboydiiCDC308394MREFIDENSGEFFVQVWGNGTNFDNTILRRSYERQGIPCPWRYYNDRDVRTIVELGKAIDFDARTAIPFEGERHNALDDARYQAKYVSAIWQKLIPSQADF
complement(933168..933986)         PROPHAGE_Escher_CFT073: transposase insF; SbBS512_E1008; phage(gi26249410)           0.0                 ShigellaboydiiCDC308394MCQVFGVSRSGYYNWVQHEPSDRKQSDERLKLEIKVAHIRTRETYGTRRLQTELAENGIIVGRDRLARLRKELRLRCKQKRKFRATTNPNHNLPVAPNLLNQTFAPTAPNQVWVADLTYVATQEGWLYLAGIKDVYTCEIVGYAMGERMTKELTGKALFMALRSQRPPAGLIHHSDRGSQYCAYDYRVIQEQSGLKTSMSRKGHCYDNAPMESFWGTLKNESLSHYRFNNRDEAISVIREYIEIFYNRQRRHSRLGNISPAAFREKYHQMAA
complement(934022..934324)         PROPHAGE_Xantho_33913: ISxac3 transposase; SbBS512_E1009; phage(gi21231087)          2.13e-12            ShigellaboydiiCDC308394MSRKNQRYSKEFKAEAVRTVLENQLSISEGASRLSLPEGTLGQWVTAARKGLGTPGSRTVAELESEILQLRKALNEARLERDILKKATAYFAQESLKNTR
934564..935154                     PHAGE_Entero_phiP27_NC_003356: hypothetical protein; SbBS512_E1010; phage(gi18249917)     6.47e-142           ShigellaboydiiCDC308394MDSLQDDYTKLLYGLMPPGPAWSDTDGVLDGLAPSLVRVHQRADELVIEIDPGQSTELIERYEELYGLPDSCSPVGTQTLRQRQQRLEAKANVAGGINEQFFLDQLEALGYTGVTIEQFQHLDASPDPEWGDRWRYFWRVTLPVDAGAQWQTCTDACNTPIRTWGDTVAECVINKLCPSHTVVLFSYPDEDEDAQD
936353..936898                     PHAGE_Entero_phiP27_NC_003356: putative tail fiber assembly protein; SbBS512_E1013; phage(gi18249919)     6.59e-98            ShigellaboydiiCDC308394MLHLKNITVGNPKTAEQYQLTKQYDVTWLFSEDGKNWYEEQKNFASDTIKMVYTGDGRVVWVGKDVTGIEPRNASVIEVPDITANRRITAPGYWFYRNDEFVFDYRLKAEDERDALLAQVSARTGEWEEDLLLGLISDEDREKLKAYRIYAKSLQAMDFSAITDKSSYNAIEWPVSPEGSS
936922..937980                     PHAGE_Entero_phiP27_NC_003356: putative tail fiber protein; SbBS512_E1014; phage(gi18249920)     3.87e-44            ShigellaboydiiCDC308394MSVVISGALTDGAGIPMSGCQIILKSRVNTSEVVMRTRADVVTGNNGEYSFEAQVGKYCVYLKRDWRDEYCVGDIAVYDDSKPGTLKTANHLSEIAAAGEKAQQKSRDNLGLKSAATMEAQSDIYDRTKGRLAIPGAFGFGCAFLPEDVIRFDTKSDFQAWVRNALPGEYSVAGPYDIIIPDTRFEGVLSIRWTDARPETTEPRYRAKSLTFYGINGPIYHTRYCYWPISRLTDWVKINITTEDIIYRIVASSVRNRWGDPDIGGLIIAAYQGEADGDKVIRLVRGQSYRGSRLGPVGISVPSTPTGTYIASPQFFITGCSEHSLPGSYCALSGVPDAHVSGAMPGLFIRTS
937937..938554                     PHAGE_Entero_phiP27_NC_003356: hypothetical protein; SbBS512_E1015; phage(gi18249921)     2.37e-100           ShigellaboydiiCDC308394MSLAQCPGFLFAHREECTVEIKKTINPRYTESGAVDCDVFFDDRDQAVPYTATADDVAPTGQQIWQELQSGKWGEIAPFTVTPEMLEAAREARRQEIEAWRAEQEAKPFTFEWNGRIWNAGPDSLGRLSPVVMLAKSVTAQTHMAWSDADNQQVKLSMPELEELAAAMVQAQVDRNDEIYRRQREMKEELSGLDDLASIRAFDVE
complement(938734..940377)         PHAGE_Phage_Gifsy_1_NC_010392: leucine-rich repeat protein; SbBS512_E1016; phage(gi169257209)     3.63e-05            ShigellaboydiiCDC308394MLPVNNPPLSTGNVSFYRTTSIDNVHNNYLSEWVEWTKNSISGENRETAFTRLQLCLENSETSLDLSCLGLRSLPRLPDNLDEINVSNNQLSMLPELPRALKELNASSNQLSALPELPVSLEYINVSDNHLFALPELPASLEYINVSDNHLSVLPRLPMSLELLDAARNALEVIPDFPERDDHIIRIFWLNQNRITAIPESILGLSSDSVVNLRENQLSPRIMQTLLQQTAQPDYHGPRIYFSMSDGQQNTLHRPLADAVTAWFPENKQSDVSQIWHAFEHEEHANTFSAFLDRLSDTVSARNTSGFREQVAAWLEKLSASAELRQQSFAVAADATESCEDRVALTWNNLRKTLLVHQASEGLFDNDTGALLSLGREMFRLEILEDIARDKVRTLHFVDEIEVYLAFQTMLAEKLQLSTAVKEMRFYGVSGVTANDLRTAEAMVRSREENEFTDWFSLWGPWHAVLKRTEADRWALAEEQKYEMLENEYPQRVADRLKASGLSGDADAEREAGAQVMRETEQQIYRQLTDEVLALRLSENGSQLHHS
complement(940693..941349)         conserved hypothetical protein; SbBS512_E1017                                        N/A                 ShigellaboydiiCDC308394MKKNTDDGAKIYTPLTLKLYDWWVLGVSNRLAWGCPTKEHLLPHFLEHLGNNHLDIGVGTGFYLTHVPESSLISLMDLNEASLNAASKRAGESKIKHKISHDVFEPYPAALHGQFDSISMFYLLHCLPGNISTKSCVIRNAAQALTDDGTLYGATILGDGVVHNSFGQKLMRIYNQKGIFSNTKDSEEGLTHILSEHFENVKTKVQGTVVMFSASGKK
941418..941687                     PHAGE_Entero_HK630_NC_019723: tail fiber assembly protein; SbBS512_E1018; phage(gi428782810)     1.59e-25            ShigellaboydiiCDC308394MLPQHSDIEIAWYASIQQEPNGWKTVTTQFYIQEFSEHIAPLQDAVDLEIATEEENSLLEAWKKYRVLLNRVDTSTAPDIEWPEEPDTM
complement(942713..943015)         PROPHAGE_Shewan_MR-1: ISSod1, transposase OrfA; SbBS512_E1020; phage(gi24373865)     6.49e-11            ShigellaboydiiCDC308394MKKRNFSAEFKRESAQLVVDQKYTVADAAKAMDVGLSTMTRWVKQLRDERQGKTPKASPITPEQIEIRKLRKKLQRIEMENEILKKATALLMSDSLNCSR
954098..954109                     attR                                                                                 N/A                 GGGACTTGAACC

#### region 6 ####
979634..980011                     PHAGE_Shigel_SfIV_NC_022749: IS1 transposase B; SbBS512_E1074; phage(gi557307573)     4.00e-87            ShigellaboydiiCDC308394MDEQWGYVGAKSRQRWLFYAYDRLRKTVVAHVFGERTMATLGRLMSLLSPFDVVIWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHYLNIKHYQ
complement(980105..980293)         conserved hypothetical protein; SbBS512_E1075                                        N/A                 ShigellaboydiiCDC308394MKVNDRVTVKTDGGPRRPGVVLAVEEFSEGTMYLVSLEDYPLGIWFFNEAGHQDGIFVEKAE
980456..980683                     conserved hypothetical protein; SbBS512_E1076                                        N/A                 ShigellaboydiiCDC308394MKTAKEYSDTAKREVSVDVDALLAAINEISESEVHRSQNDSEHVSVDGREYHTWRELADAFELDIHDFSVSEVNR
980981..981796                     mannosyl-3-phosphoglycerate phosphatase homolog; SbBS512_E1078                       N/A                 ShigellaboydiiCDC308394MFSIQQPLLVFSDLDGTLLDSHSYDWQPAAPWLSRLREANVPVILCSSKTSAEMLYLQKTLGLQGVPLIAENGAVIQLAEQWQDIDGFPRIISGISHGEISQVLNTLREKEHFKFTTFDDVDDATIAEWTGLSRSQAALTQLHEASVTLIWRDSDERMAQFTARLNELGLQFMQGARFWHVLDASAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVIDYAVIVKGLNREGVHLHDEDPARVWRTQREGPEGWREGLDHFFSAR
complement(981793..983469)         PHAGE_Bacill_SP_15_NC_031245: hypothetical protein; SbBS512_E1077; phage(gi100150)     2.63e-24            ShigellaboydiiCDC308394MENQSWLKKIARRLGPGHVVNLCFIVVLLFSTLLTWREVVVLEDAYISSQRNHLENVANALDKHLQYNVDKLIFLRNGMREALVAPLDFTSLRNAVTEFEQHRDEHAWQIELNRRRTLSVNGVSDALVSEGNLLSRENESLDNEITAALEVGYLLRLAHNTSSMVEQAMYVSRAGFYVSTQPTLFTRNVPTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPVDSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEAVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFSHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVCASDNA
complement(983919..984836)         putative membrane protein; SbBS512_E1080                                             N/A                 ShigellaboydiiCDC308394MLLAGSSLLTLLDDIATLLDDISVMGKLAAKKTAGVLGDDLSLNAQQVSGVRANRELPVVWGVAKGSLINKVILVPLALIISAFIPWAITPLLMIGGAFLCFEGVEKVLHMLEARKHKEDPAQSQQRLEKLAAQDPLKFEKDKIKGAIRTDFILSAEIVAITLGIVAEAPLLNQVLVLSGIALVVTVGVYGLVGVIVKIDDLGYWLAEKSSALMQALGKGLLIIAPWLMKALSIVGTLAMFLVGGGIVVHGIAPLHHAIEHFAGQQSAVVAMILPTVLNLILGFIIGGIVVLGVKAVAKIRGQAH
complement(984817..985062)         transposase; SbBS512_E1081                                                           N/A                 ShigellaboydiiCDC308394MPCFTAMRAEIALMSGSAFAVTHHAFSSGAGKTSDGNGSHASTLKSPSYTKSVSWQHYPAVFASYLHPSTIKMRGNAFGRE
985137..985640                     PHAGE_Shigel_SfIV_NC_022749: IS1 transposase B; SbBS512_E1082; phage(gi557307573)     2.90e-111           ShigellaboydiiCDC308394MSRQCTHYGRWPQHGFTSLKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTLATLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHYLNIKHYQ
985642..986046                     PHAGE_Stx2_c_1717_NC_011357: putative major tail subunit; SbBS512_E1083; phage(gi209447187)     1.28e-72            ShigellaboydiiCDC308394MESLPKFLAEVRQHTWSSGTNGVVAATFSLRLKGKPVSFVVPLAFVKNLDKTLTVNTGALLTMSVSANGGMPPYKYAWKKDGQPVDGQTTDTFSKPGAQSADAGKYTCVVTDSAEKAQSVTSVECTVTVSAAAG
986061..986435                     PHAGE_Stx2_c_1717_NC_011357: putative tail assembly chaperone; SbBS512_E1084; phage(gi209447188)     4.16e-84            ShigellaboydiiCDC308394MKKDLKTLALARLSGFRHKTVKVPEWGNVSVVLREPSAEAWYLWQEVLNGDGEDDDTLSVVAKTRRNLEADVTLFCDVLCDTDLQRVFTPDDREQVLAVYGPVHARLLRQALELIADAESARKK
986459..986740                     PHAGE_Stx2_c_1717_NC_011357: hypothetical protein; SbBS512_E1085; phage(gi209447189)     2.84e-43            ShigellaboydiiCDC308394MRLALRLGRTLSELRHSLSASEAMMWMEFDRISPLGDERGDIRNAQIVKAVFGAQGMNVALKDVMLCWGEDEDKPEVDPFAALEDALSFAAQS
complement(987183..988748)         PHAGE_Stx2_c_1717_NC_011357: transposase; SbBS512_E1086; phage(gi209447153)          1.63e-77            ShigellaboydiiCDC308394MDISALNTTNDIEKLRAMALAMVQEVMSENAEKERELLEKSRRIQLLEEMLKLVRQQRFGKKCETLAGMQRSLFEEDVDADIAALTAHLDKLLPQSPEEDEKASRSRPIRKPLPVHLPRVEKIIQPDTDHCPECDEPLHYIRDAVSEKLEYIPAHFVVNRYVRPQYSCPCCQKVFSGEMPAHILPKSAVEPSVIAQVIINKYGDHLPLYRQQQVFARSDVGLPVSSMADMVGAAGAALSPLAALLHRELINRPVVHADETTLKILNTKKGGKSCSGYLWAYVSGERTGPSVVCFDCRTGRSHEYPENWLQGWGGTLVVDGHKAYRTLANKVPEITLAGCWAHARRGFADLYKISKDPRAAIAVKKIAGLYRLEKKISSRPVEKIRQWRQRYARPILEELWSWLEEQEPQCSPGKALHKAIAYALSHRVELSRFLEDGAVPLDNNVCERAIKNVVLGRKSWLFAGSQMAGERAAQIMSLLETAKRNGLEPHAWLTDVLMRLPEWPEERLAELLPLEGFTFSG
complement(988791..989456)         PHAGE_Stx2_c_1717_NC_011357: transposase; SbBS512_E1087; phage(gi209447152)          1.96e-13            ShigellaboydiiCDC308394MLPGAPVVLHVSNTVNSTIFPSHHFANGRRMSQKLNAGQMNRPFFPFILRHHCMLMYHSPSRMSQSRSSFPVEYGCAVSRHNLPMSSGHSNMLSPDNVFIAIKPVDMRRGIDSLTQYIQDELRSTWHEGAAFVFVNKARSRIKVLRWDKHGVWLCTRRLHKGSFRWPRANDAAWHLTPDEFNWLIAGVDWQQVKGHDLTKWVWLNEPELRPENTQNTLLTQ

#### region 7 ####
complement(1135174..1136349)       PROPHAGE_Shewan_MR-1: IS110 family transposase; SbBS512_E1231; phage(gi24375433)     3.66e-10            ShigellaboydiiCDC308394MGELLLHPGISTTEASMNNNNTLYVGLDVHKESITVAYAINSEPVELMGKIGTSPTDIQNLCKRLRSKSSQVSIVYEAGPCGYGLYRRLVKSGFDCMVCAPSLIPKKPGERVKTDRRDAIRLVRSLRAGDLSAVYVPGIEDEAFRDLARAWASARDDLRHARQRLKSFLLVHGVHYVGRADWGPAHRRWLSKYSFESPWRQLAFDEHRRTIEDRQAQCERLESALKEAVTEWRLYPVVEALQAMRGIQFITAVGLISELGDLTRFEHPRQLMSWFGITPSEYSSGGSRHQGSITKAGNSYARKLLVEAAWSYRHPARISPAIQKRQENLPRPVIDRAWDAQLRLCKRYRKLQAKGKNVNITIVAVARELAGFIWDMGRIAMSVAQQPQCHK
complement(1136408..1136947)       HTH-type transcriptional regulator MlrA; SbBS512_E1232                               N/A                 ShigellaboydiiCDC308394MLKPQRTDGGHRLFNDADIDRIREIKRWIDNGVQVSKVKMLLSNENVDVQNGWRDQQETLLTYLQSGNLHSLRTWIKERGQDYPAQTLTTHLFIPLRRRLQCQQPTLQALLAILDGVLINYIAICLASARKKQGKDALVVGWNIHDTTRLWLEGWIASQQGWRIDVLAHSLNVRQYDFP
complement(1137563..1137940)       PHAGE_Shigel_SfIV_NC_022749: IS1 transposase B; SbBS512_E1233; phage(gi557307573)     3.18e-86            ShigellaboydiiCDC308394MDEQWGYVGAKSRQRWLFYAYDRLRKTVVAHVFGERTMATQGRLMSLLSPFDVVIWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHYLNIKHYQ
complement(1138335..1138577)       PHAGE_Entero_phiP27_NC_003356: hypothetical protein; SbBS512_E1235; phage(gi18249867)     1.94e-33            ShigellaboydiiCDC308394MFALIQRGQIYTDRAGYPVVITRITEHSVFFRRMDGRSGRVRIGELNCLFEHIDHQEYRKILADTEQEKHLKKLRAIKRK
complement(1138662..1139606)       PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; SbBS512_E1236; phage(gi100093)     8.92e-74            ShigellaboydiiCDC308394MITITKGRLLTIKQWRETYGPGSNVVLPAEEAEELARIALASLEADPVKRVNSDQMHRVCLEANRYLDKYDAMAKEVNKLLGRIAPPAPVFNGEYGDAYQGAREDLSIWKRRALEADEHVRRLEQINDHMVKEAQGESRMGEPVIREPAPVVPEEATPENVEMLSGYVSTYKLTDSERDIAAEIWNACRAAMLQSGNFRENKNSSTNNFREIAETSTNYPAIPSEVLSAILKVARIRADFDDFDGDRRGIGDCLDEAEQELIVTINKYASQLAAEPIAPNDVREQTAIPQVPVTPDGWISCSERMPDDRQEVNQ
1139894..1140196                   PROPHAGE_Shewan_MR-1: ISSod1, transposase OrfA; SbBS512_E1237; phage(gi24373865)     7.18e-11            ShigellaboydiiCDC308394MKKRNFSAEFKRESAQLVVDQKYTVADAAKAMDVGLSTMTRWVKQLRDERQGKTPKASPITPEQIEIRKLRKKLQRIEMENEILKKATALLMSDSLNSSR
1140687..1141013                   PHAGE_Entero_BP_4795_NC_004813: putative transposase OrfA protein of IS629; SbBS512_E1239; phage(gi157166066)     1.33e-73            ShigellaboydiiCDC308394MTKNTRFSPEVRQRAVRMVLESQGEYDSQWATICSIAPKIGCTPETLRVWVRQHERDTGGGDGGLTTAERQRLKELERENRELRRSNDILRQASAYFAKAEFDRLWKK
1141010..1141900                   PHAGE_Entero_BP_4795_NC_004813: putative transposase OrfB; SbBS512_E1240; phage(gi157166067)     0.0                 ShigellaboydiiCDC308394MMPLLDKLREQYGVGPLCSELHIAPSTYYHCQQQRHHPDKRSARAQRDDWLKKEIQRVYDENHKVYGVRKVWRQLLREGIRVARCTVARLMAVMGLAGVLRGKKVRTTISRKAVAAGDRVNRQFVAERPDQLWVADFTYVSTWQGFVYVAFIIDVFAGYIVGWRVSSSMETTFVLDALEQALWARRPSGTVHHSDKGSQYVSLAYTQRLKEAGLLASTGSTGDSYDNAMAESINGLYKAEVIHRKSWKNRAEVELATLTWVDWYNNRRLLERLGHTPPAEAEKAYYASIGNDDLAA
complement(1142348..1142941)       PHAGE_Escher_Av_05_NC_025830: hypothetical protein; SbBS512_E1242; phage(gi730985108)     6.56e-28            ShigellaboydiiCDC308394MSKIDYQALREAAEQATQDEWVAYILPGHNGIYPARTSEGRHCGYFIDWPGVCQGRESISIRTYAVNCNDAWLNTEGDDISGSYVKYKDHQEVVAALEAKCAALAAENAGIKSAIPESRDIEDDNDNDNMDDVSLAEDFGFNHAIERMRRQIPETPTTDAFLAEVRAQGVDAAIEAAKNLVAQEYECEVVNKNWPPS
complement(1142928..1143194)       PHAGE_Entero_Sf101_NC_027398: hypothetical protein; SbBS512_E1243; phage(gi849122284)     6.41e-44            ShigellaboydiiCDC308394MGLNSDVTAEEVYDLAVLALNLSNIANLKRYELDMDGCDSCGQDCGADMTEDPDGDYVLFDDVVKLFEFDTTTQKLEIPAKEAASEQD
complement(1143762..1144343)       PHAGE_Entero_phiP27_NC_003356: hypothetical protein; SbBS512_E1244; phage(gi18249870)     1.29e-89            ShigellaboydiiCDC308394MQYDEFQAEATANGIRTGSMTIDYHDAIRRLDAGEFDTPNVRGLRILQCLAQADEAGLLGKLPVEMKVAQWRWLYVTTFINEEEDKNGTIDILNEHGTTEHAVVYNGMYGFMTIYPGPIRFALQQYIEWNLIQKYGEAEGMGRALFLYQKMLTTSPDKGFILSDMGREGLEILLDEIINEMNTHGMQSETDIK
complement(1144349..1144543)       PHAGE_Entero_phiP27_NC_003356: hypothetical protein; SbBS512_E1245; phage(gi18249871)     1.14e-15            ShigellaboydiiCDC308394MHQKTAEHEQTRILLTIKNGKVIFIRHVHDDELVGTLSTFLFIAEKAGYDVIAPADEDEDEDEE
1145041..1145946                   PROPHAGE_Escher_MG1655: IS2 transposase TnpB; SbBS512_E1246; phage(gi16132094)       0.0                 ShigellaboydiiCDC308394MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCEREALHWAVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLEI
complement(1146074..1146280)       PHAGE_Entero_phiP27_NC_003356: hypothetical protein; SbBS512_E1247; phage(gi18249872)     8.97e-41            ShigellaboydiiCDC308394MRETTSQQDNYEGICLEPDSFAVNVYHLLHATQVLHMSSNHETKTLGSEILSFACEYTKAAAEKELAQ
complement(1146568..1146897)       PHAGE_Entero_phiP27_NC_003356: hypothetical protein; SbBS512_E1248; phage(gi18249874)     8.80e-44            ShigellaboydiiCDC308394MLLQNKNSAINNRLRTQREACGLTTAELARLLDLDEEIIIQWESGEYEPTISMLIPLANILGCDPMWLLTGEVTPPEQPKSEEQQHHDASQQVCPLSREALLRKNQYQW
complement(1147174..1147830)       PHAGE_Entero_phiP27_NC_003356: putative lambda repressor; SbBS512_E1249; phage(gi18249875)     9.99e-162           ShigellaboydiiCDC308394MKSLGERLINARQKAGLTQDALAKKAGITRVAISKAEQGLTKSFNGDTLFKVAAALGCSPQWLQNGDEKDKHWENNVKSCPQRDTAHSYPVINWVQAGLFATSGDDYNMYDQDNWRHSVKYAGERGFWLEVHGDSMTSPVGITFPEGMSILVNPDKEVFSGCYVIARKKSTNEATFKKYISDMGKAFLKPLNPQYPIIEMDNDCEIVGVVVDARWDIF
1148166..1148873                   PHAGE_Entero_phiP27_NC_003356: hypothetical protein; SbBS512_E1250; phage(gi18249878)     2.92e-142           ShigellaboydiiCDC308394MNTAIFNGKASMTSVEIAELVGSRPDSVKRTIETLAKKGIIQFPQTVEIENKQSLGPRRFSSAYVFEGERGKRDSIIVVAQLCPEFTARLVDRWRELEEQIRKPMSEIEMVAAMALEAVRQQKRITQVEEKVSHVAETVEQIKKGTIREGYAGYRQLKAKTGLSDDKCRNLVNAYQIPTDTHEFMTPDRLLPRRAIVAVEPFMAAFYRVMEEAEPRGTRWYHPKMGLFQVIGWQR
1148982..1149830                   PHAGE_Entero_cdtI_NC_009514: putative antirepressor; SbBS512_E1251; phage(gi148609426)     1.02e-118           ShigellaboydiiCDC308394MIISRPNIDSAISGRYTVSAPYKAGAGIGVLKFAHAHNRASAVFLRTFPHIQIMVGRAGASKDAPGSCATGYANPVRLTTSVIGVPCGEFSKFAHEDVTMATTPTQTHPKIDVIHGKAVTSSLAVAEYFCKQHKNVIQKIQTLECSVEFTELNFQPSDYTDCTGRKLPCYQITRDGFAFLAMGFTGKRAARFKEAYINAFNQMEKNLSGADAVDMSAVARNARGVYLHLREIHQIWTSQLYPMLKAVESPLASKLYDRVGDAVFGAALVDSRLNGSDKEVRP
1149827..1150021                   conserved hypothetical protein; SbBS512_E1252                                        N/A                 ShigellaboydiiCDC308394MISYEIIISTTEYRNDVSVRTDVSVWHRRYKSRKTAELKAAEMCETISMKGSPVKYVTTVEVRP
1150239..1150538                   transcriptional regulatory protein; SbBS512_E1253                                    N/A                 ShigellaboydiiCDC308394MNCFQFVCGCAFDNPIQRLIMLRVLMSGSSDGEGERVIDHQVLADFCCCSKQAIFRETLALERAGYLHIRKIATLTIDAKARLQPARGYTILMPRKEVV
1151574..1152404                   PHAGE_Entero_phiP27_NC_003356: putative replication protein DnaC; SbBS512_E1255; phage(gi18249882)     4.44e-178           ShigellaboydiiCDC308394MDELRAEIAFAQKGEKPWPYRSCLMREGRGYCEKHGKYRTHILVWSDRNGEDREKISCCPDCLIAEASYLTMELSSLKAEELTDNAGIALRFRDCEFDNYLEVNPDAARNLAACRRYAENWPDMLENGTSLVMTGSCGTGKNHLAVSMAKHIIRNYLASVEITDVMRLTRAVKNCWRNDSEKTADDVIEHYASLDLLIVDEVGVQFGSAAEMAILQEIINARYEGILPTILISNLSPEELWAFISPRIADRITDGGRNWLSFNWPSYRSRIGGVAA

#### region 8 ####
1153799..1154056                   PHAGE_Entero_phiP27_NC_003356: hypothetical protein; SbBS512_E1257; phage(gi18249884)     1.88e-32            ShigellaboydiiCDC308394MNNRTITVSPEQLRRQAQEMLRCAEQMEKTSVAKDTLRKQLTPALRDLLQAKHRTQKAVDELVDCVAELEGQVSQFETLVKEFTA
1155110..1155484                   PHAGE_Shigel_Stx_NC_029120: crossover junction endodeoxyribonuclease rusA; SbBS512_E1260; phage(gi985761276)     2.59e-46            ShigellaboydiiCDC308394MLIDLVLPYPPTVNTYWRRRGSTYFISEEGKRYRRAVALIVRQQRLKLSLSGRLAIKVIAEPPDKRRRDLDNILKAPLDALTHAGVLMDDEQFDEINIVRGQPVSGGRMGVKIYPIMHEEQVKK
1155481..1156302                   PHAGE_Entero_HK225_NC_019717: late gene regulator Q; SbBS512_E1261; phage(gi428782441)     2.00e-114           ShigellaboydiiCDC308394MKLEDLPKYYSPKSPSLTDASASTSKDALSITDVMAAQGMTQNRAEMGFSAFLGKMGISMNDRARATELLADYALSRCDRVAALRKLPAEIKPVVMRIMASYAFEDYARSAASKKQCPCCHGKKFIESEVFTNKIQYPDGKPPVWAKCTKGVYPSYWEEWKKVREVVKVACPECGGKGEVSTACKDCRGRGVAIHREESVKRGMPVIRDCQRCGGRGCERLPSTEAFNAICKVTSAITLDTWKKSVKRFYDTLVVRFDIEEAWAERQLKRVTR
1156442..1156726                   PHAGE_Entero_phiP27_NC_003356: hypothetical protein; SbBS512_E1262; phage(gi18249887)     1.32e-41            ShigellaboydiiCDC308394MAVNTCLSACWLFRQELLVCHVNRKREKDMLKQQDMTETARVVFNELSVTEPATVGEIAQNTYLSRERCQLILTQLVMAGLADYQFGCYRRLPQ
1156877..1157926                   PHAGE_Entero_phiP27_NC_003356: putative DNA methylase; SbBS512_E1263; phage(gi18249888)     0.0                 ShigellaboydiiCDC308394MLNTVKISSCELINADCLEFIRSLPENSVDLIVTDPPYFKVKPEGWDNQWKGDDDYLKWLDQCLAQFWRVLKPAGSLYLFCGHRLASDIEIMMRERFSVLNHIIWAKPSGRWNGCNKESLRAYFPATERILFAEHYQGPYRPKDAGYEAKGRALKQHVMAPLISYFRDACAALGITAKQIADATGKKNMVSHWFSASQWQLPNESDYLKLQALFARVAEEKHQRGELEKPHHQLVDTYTSLNRQYAELQSEYKHLRRYFGVTAQVPYTDVWTHKPVQFYPGKHPCEKPAEMLQQIISASSRPGDLVADFFMGSGSTVKAALALGRRAIGVELETGRFEQTVREVQDLIV
1157976..1158051                   tRNA                                                                                 N/A                 GGCCCTTTAGCTCAGTGGTGAGAGCGAGCGACTCATAATCGCCAGGTCGCTGGTTCAAATCCAGCAAGGGCCACTA
1158058..1158136                   tRNA                                                                                 N/A                 ACCGCCATTAGCTCATCAGGAAAGAGCGCCAGCCTTCGAAGCTGGTTGCGCGGAGTTCGGGTCCCCGAAGGCGGTTCAT
1158148..1158226                   tRNA                                                                                 N/A                 TGCGTTGTTAGCTCAGCCGGACAGAGCAATTGCCTTCTAAGCAATCGGTCACTGGTTCGAATACAGTAGAACGCGCCAC
1159112..1160977                   PHAGE_Entero_BP_4795_NC_004813: hypothetical protein YjhS; SbBS512_E1266; phage(gi157166028)     0.0                 ShigellaboydiiCDC308394MAFKHYDVVRAASPSDLAEKLTHKLKEGWQPFGSPVAITPYTLMQAIAAEGAVISATSNPEYYFVVVLAGQSNGMSYGEGLPLPGTYDRPDPRIKQLARRSTVTPGGAACKYNDIIPADHCLHDVQDMSRLNHPKADLSKGQYGTVGQGLHIAKKLLPFIPANAGILLVPCCRGGSAFTTGADGTYSDASGASENSTRWGVDKPLYKDLIGRTKAALEKNPKNVLFAVVWMQGEFDFGGTPANHAAQFGALVDKFRADLADMAGQCVGGSAGGVPWICGDTTYFWKQKNESTYQTVYGSYKNKTEKNIHFVPFMTDENGVNVPTNKPEEDPDIPGIGYYGSKWRDSSATWTSQDRASHFSSWARRGIISDRLATAILSCAGKSSAFVNGTAGVVVPDRPVTTSESVIFYDAKKATDNQLKPYGWDGMYGRRTLVDDSGNKALRIEKNNSAKSWSMYCDIAADKAKLLLEKGGEIAVRFKIPENVNLETTRNKYAFGLYWRIAEWPGEGGEGHLSSFFVQTDKASINIAYHHTVNQQKELGTFGAFDHDWHTLAFKFKGSNSINVTPVLDGVDGQAFDLVKWANTANGLNRFVITDITGSAETYPVLIDTVEVKANKAGAAA
1161324..1161551                   PHAGE_Escher_P13374_NC_018846: hypothetical protein; SbBS512_E1267; phage(gi410491644)     5.35e-38            ShigellaboydiiCDC308394MSEITSLVTAEAVKEVRSALKQKLRQNLESRLDAEVDAILDELLGVAAVPEPEGIAGDGSASDGGEPTPDSDMMM
1161628..1161843                   PHAGE_Shigel_Ss_VASD_NC_028685: holin lysis protein S; SbBS512_E1268; phage(gi966200466)     1.22e-45            ShigellaboydiiCDC308394MYQMEKITTGVSYTTSAVGTGYWFLQLLDRVSPSQWAAIGVLGSLLFGLLTYLTNLYFKIREDRRKAARGE
1161848..1162192                   PHAGE_Entero_BP_4795_NC_004813: hypothetical protein; SbBS512_E1269; phage(gi157166032)     3.03e-75            ShigellaboydiiCDC308394MKKKYELVVKGINNYPNKITVTVALEIGGYPSLLLPDVAISLDRTEDATLEFYEAEAKKQAKQFFMDVAAGLCEGDGPLPEKRPVILEAQDVLITYRGKLPGIITGSLKTPPLA
1162243..1162776                   PHAGE_Entero_BP_4795_NC_004813: putative R protein; SbBS512_E1270; phage(gi157166033)     1.48e-125           ShigellaboydiiCDC308394MNTKIKYGLSAAVLALIAAGAPAPEILDQFLDEKEGNHTTAYRDGAGIWTICRGAILVDSKPVVPGMKLSKEKCDQVNAIERDKALAWVERNIKVPLTEPQKAGIASFCPYNIGPGKCFPSTFYRRINAGDRRGACEAIRWWIKDGGRDCRIRSNNCYGQVSRRDQESALACWDIDR
1162969..1163115                   conserved hypothetical protein; SbBS512_E1271                                        N/A                 ShigellaboydiiCDC308394MKNGLELKAPVTDDISRALAFAIKWMAVGVAVSPMLYGLAKLVIALKS
1163130..1163261                   PHAGE_Escher_phi191_NC_028660: hypothetical protein; SbBS512_E1272; phage(gi966198023)     1.22e-14            ShigellaboydiiCDC308394MSDKLITLAKILCVIVGISFSLMLVALFLSMAWMMLSSSGLLG
1163258..1163731                   PHAGE_Entero_BP_4795_NC_004813: putative endopeptidase Rz; SbBS512_E1273; phage(gi157166036)     7.63e-96            ShigellaboydiiCDC308394MNINRMLSAFTVILLVVCGALWLATDHYRDNAITYKAQRDKKARELELANATITDMQQRQRDVAALDARYSRELADARAENETLRADVAAGRKRLRINATCSGTVREATGTSGMDNATGPRLADTAERDYFTLRERLMTMQKQLEGAQEYIRTQCIN
1164324..1164650                   TonB domain protein; SbBS512_E1274                                                   N/A                 ShigellaboydiiCDC308394MKRNLPLIILLSSLVMGCTQHKTDMPRQLVKALPQYPAYAAANYIKGRVDVRFDIGADGTVTRIEFIRSEPHHLFDEQVVKAMAKWRFEKDRPCKGVKKTFIFSPSAP
complement(1164782..1164982)       PHAGE_Entero_BP_4795_NC_004813: hypothetical protein; SbBS512_E1275; phage(gi157166037)     3.77e-28            ShigellaboydiiCDC308394MSSKNRTRRTTTRNIRFPNQMIEQINIALDLKGSGNFSAWVIEACRRRLATDATHLRPASMTNNEK
1165150..1166325                   PHAGE_Bacill_PfEFR_5_NC_031055: DNA helicase; SbBS512_E1276; phage(gi100021)         2.30e-05            ShigellaboydiiCDC308394MGELLLHPGISTTEASMNNNNTLYVGLDVHKESITVAYAINSEPVELMGKIGTSPTDIQNLCKRLRSKSSQVSIVYEAGPCGYGLYRRLVKSGFDCMVCAPSLISKKPGERVKTDRRDAIRLVRSLRAGDLSAVYVPGIEDEAFRDLARAWASARDDLRHARQRLKSFLLVHGVHYVGRADWGPAHRRWLSKYSFESPWRQLAFDEHRRTIEDRQAQCERLESALKEAVTEWRLYPVVEALQAMRGIQFITAVGLISELGDLTRFEHPRQLMSWFGITPSEYSSGGSRHQGSITKAGNSYARKLLVEAAWSYRHPARISPAIQKRQENLPRPVIDRAWDAQLRLCKRYRKLQAKGKNVNITIVAVARELAGFIWDMGRIAMSVAQQPQCHK
complement(1167949..1168767)       PROPHAGE_Escher_CFT073: transposase insF; SbBS512_E1278; phage(gi26249410)           0.0                 ShigellaboydiiCDC308394MCQVFGVSRSGYYNWVQHEPSDRKQSDERLKLEIKVAHIRTRETYGTRRLQTELAENGIIVGRDRLARLRKELRLRCKQKRKFRATTNPNHNLPVAPNLLNQTFAPTAPNQVWVADLTYVATQEGWLYLAGIKDVYTCEIVGYAMGERMTKELTGKALFMALRSQRPPAGLIHHSDRGSQYCAYDYRVIQEQSGLKTSMSRKGHCYDNAPMESFWGTLKNESLSHYRFNNRNEAISVIREYIEIFYNRQRRHSRLGNISPAAFREKYHQMAA
complement(1168803..1169105)       PROPHAGE_Xantho_33913: ISxac3 transposase; SbBS512_E1279; phage(gi21231087)          2.13e-12            ShigellaboydiiCDC308394MSRKNQRYSKEFKAEAVRTVLENQLSISEGASRLSLPEGTLGQWVTAARKGLGTPGSRTVAELESEILQLRKALNEARLERDILKKATAYFAQESLKNTR
complement(1169157..1169477)       PHAGE_Stx2_c_1717_NC_011357: transposase; SbBS512_E1280; phage(gi209447153)          3.87e-13            ShigellaboydiiCDC308394MNQKYLIRIAELECQLRQKDQQLSLVEETEAFLRSALARAEEKIEEDEREIEHLRAQIEKLRRMLFGTRSEKLRREVEQAEALLKQREQDSDRYSGREDDPQVEVA
1169583..1169843                   conserved hypothetical protein; SbBS512_E1281                                        N/A                 ShigellaboydiiCDC308394MRAGNGYLAVTHSRPDKLAFLQASGEQAQTISISPQDFNHVTPSATEDEQVTGEGIIIQHMLYLFTQPVERLTHIGYPSNEPDAGA
complement(1170326..1170745)       PHAGE_Entero_DE3_NC_042057: RecA-like recombination protein; SbBS512_E1282; phage(gi100035)     6.65e-11            ShigellaboydiiCDC308394MATQTEVARHLSLTDRQLRRLQKLPGAPISNKRGQLDLDAWRDFYISYLRRSKNDVPDGDSEDDYEEKLLIARWELTAEQAVTQQLKNEVSKGKLIDTGFCIFALSKLAMALSSTLDSIPLSMQRQFPGKRKLTAVCSH
complement(1171587..1171847)       conserved hypothetical protein; SbBS512_E1283                                        N/A                 ShigellaboydiiCDC308394MRAGNGYLAVTHSRPDKLAFLQASGEQAQTISISPQDFNHVTPSATEDEQVTGEGIIIQHMLYLFTQPVERLTHIGYPSNEPDAGA
1171953..1173545                   PHAGE_Stx2_c_1717_NC_011357: transposase; SbBS512_E1284; phage(gi209447153)          0.0                 ShigellaboydiiCDC308394MNQKYLIRIAELECQLRQKDQQLSLVEETEAFLRSALARAEEKIEEDEREIEHLRAQIEKLRRMLFGTRSEKLRREVEQAEALLKQREQDSDRYSGREDDPQVPRQLRQSRHRRPLPEHLPREINRLEPEESCCPECGGELDYLGEVSAEQLELVSSALKVIRTERVKKACTKCDCIVEAPAPSRPIERGIAGPGLLARVLTGKYCEHLPLYRQSEIFARQGVELSRALLSNWVDACCQLMTPLNDALYRYVMNSRKVHTDDTPVKVLAPGRKKAKTGYIWTYVRDDRNAGSPEPPAVWFAYSPDHQGKHPEQHLSPFRGILQADAFNGYDRLFSAEREGGALTEAGCWAHARRKVHDVYISTKSATAEEALKLIGELYAIEHEIRGLPVSERLAVRQMQSKPLLTSLYKLMQEKEHTLSKKCRLRDAFRYIRKHWVALCNFSDDGLAEADNNAAERALRAVCLGKKNFMFFGSDHGGERGALLYGLIGTCRLNGIDPEAYLRYILSVLPEWPSNRVDELLPWNVALTNK
complement(1173838..1175013)       PHAGE_Bacill_PfEFR_5_NC_031055: DNA helicase; SbBS512_E1285; phage(gi100021)         2.39e-05            ShigellaboydiiCDC308394MGELLLHPGISTTEASMNNNNTLYVGLDVHKESITVAYAINSEPVELMGKIGTSPTDIQNLCKRLRSKSSQVSIVYEAGPCGYGLYRRLVKSGFDCMVCAPSLIPKKPGERVKTDRRDAIRLVRSLRAGDLSAVYVPGIEDEAFRDLARAWASARDDLRHARQRLKSFLLVHGVHYVGRADWGPAHRRWLSKYSFESPWRQLAFDEHRRTIEDRQAQCERLESALKEAVTEWRLYPVVEALQAMRGIQFITAVGLISELGDLTRFEHPRQLMSWFGITPSEYSSGGSRHQGSITKAGNSYARKLLVEAAWSYRHPARISPAIQKRQENLPRPVIDRAWDAQLRLCKRYRKLQAKGKNVNITIVAVARELAGFIWDMGRIAMSVAQQPQCHK
1175200..1177128                   PHAGE_Entero_DE3_NC_042057: DNA polymerase; SbBS512_E1286; phage(gi100036)           0.0                 ShigellaboydiiCDC308394MNISEQQLNNMMSAVTTALQPLIRALPVTPVEWADQNYYLPKESSYGEGEWKTLPFQVAIMNCMGNDQVRTVNLIKSARVGYTKMLLGVVGYFIEHKSRNSLLFQPTDSAAEDFMKSHVEATIRDVPCLKDLSPWLGRKHRDNTLTLKRFSSGVGFWCLGGAAAKNYREKSVDVVCYDELSSFEPDVEKEGSPTLLGDKRIEGSVWPKSIRGSTPKIKGTCQIEKAANESAHFMRFYVPCPHCGEEQYLKFGDESTPFGLKWEKDSPESVFYLCEHHGCVIHQSELDQSNGRWICENTGMWTRDGLTFFSAAGNEIPPPRSITFHIWTAYSPFTTWVQIVYDWLDALKDPNGLKTFVNTTLGETWEEAVGEKLDHQVLMDKVVHYTAAVPARVVYLTAGIDSQRNRFEMYVWGWAPGEEAFLVDKIIIMGRPDEEETLLRVDAAINKKYCHADGTEMTISRVCWDTGGIDGEIVYQRSKKHGVFRVLPVKGASVYGKPVITMPKTRNQRGVYLCEVGTDTAKEILYARMKADPTPADEATSYAIRFPDDPEIFSQTEAQQLVAEELVEKWEKGKMRLLWDNKKRRNEALDCLVYAYAALRVSVQRWQLDLAVLAKSREEETTRPTLKELAAKLSGGVNGYSR
1177112..1177318                   PHAGE_Entero_HK225_NC_019717: head-tail connector gpW; SbBS512_E1287; phage(gi428782379)     1.09e-17            ShigellaboydiiCDC308394MVTVAELQALRQARLDLLTGKRVVSVQKDGRRIEYTAASLDELNRAINDAESVLGTTRRRRRPLGVRL
1177315..1178907                   PHAGE_Entero_DE3_NC_042057: hypothetical protein; SbBS512_E1288; phage(gi100038)     0.0                 ShigellaboydiiCDC308394MKRTPVLIDVNGVPLRESLSYNGGGAGFGGQMAEWLPPAQSADAALLPALRLGNARADDLVRNNGIAANAVALHKDHIVGHMFLISYRPNWRWLGMRETAAKSFVDEVEAAWSEYAEGMFGEIDVEEKRTFTEFIREGVGVHAFNGEIFVQPVWDTESTQLFRTRFKAVSPKRVDTPGHGMGNRFLRAGVEVDRYGRAVAYHICEDDFPFSGSGRWERIPRELPTGRPAMLHIFEPVEDGQTRGANQFYSVMERLKMLDSLQATQLQSAIVKAMYAATIESDLDTEKAFEYIAGAPQGQKDNPLINILDKFSTWYDTNSVTLGGVKIPHLFPGDDLKLQTAQDSDNGFSALEQALLRYIAAGLGVSYEQLSRDYSKVSYSSARASANESWRYFMGRRKFIASRLATQMFSCWLEEALLRGIIRPPRARFDFYQARSAWSRAEWIGAGRMAIDGLKEVQESVMRIEAGLSTYEKELALMGEDYQDIFRQQVRESAEREKAGLSRPVWIAQAYQQQIAESRRPEEETTPRET
1178897..1180402                   PHAGE_Entero_DE3_NC_042057: RegA; SbBS512_E1289; phage(gi100039)                     6.82e-134           ShigellaboydiiCDC308394MRRNLSHIIAAAFNEPLLLEPAYARVFFCALGREMGAASLSVPQQQVQLDAPGMLAETDEYMAGGKRPARVYRVVNGIAVLPVTGTLVHRLGGMRPFSGMTGYDGIVACLQQAMADSQVRGILLDIDSPGGQAAGAFDCADMIYRLRQQKPVWALCNDTACSAAMLLASACSRRLVTQTSRIGSIGVMMSHVSYAGHLAQAGVDITLIYAGAHKVDGNQFEALPAEVRQDMQQRIDAAHRMFAEKVAMYTGLSVDAVTGTEAAVFEGQSGIEAGLADELINASDAISVMATALNSNVRGGTMPQLTATEAAVQENQRVMGILTCQEAKGREQLATMLAGQQGMSVEQARAILAAAAPQQPVASAQSEADRIMACEEANGREQLAATLAAMPEMTVEKARPILAAAPLANAGPSLRDQIMALDEAKGAEAQAEQLAACPGMTVESARAVLAAGSGKAEPVSASTTALFEHFMANHSPAAVQGGVSQASEDGDADVKMLMAMP
1180439..1180786                   PHAGE_Entero_DE3_NC_042057: clamp-loader subunit; SbBS512_E1290; phage(gi100040)     4.12e-29            ShigellaboydiiCDC308394MVTKTITEQRAEVRIFAGNDPAHTATGSSGISSATPALTPLMLDEATGKLVVWDGQKAGSAVGILVLPLEGTETVLTYYKSGTFATEAIRWPDSVDEHKKANAFAGTALSHAALP
1180844..1181872                   PHAGE_Entero_DE3_NC_042057: clamp-loader subunit; SbBS512_E1291; phage(gi100041)     1.92e-145           ShigellaboydiiCDC308394MGLFTTRQLLGYTEQKVKFRALFLELFFRRTVNFHTEEVMLDKITGKTPVAAYVSPIVEGKVLRHRGGETRVLRPGYVKPKHEFNYQQAVERLLGEDPAQLNDPAYRRLRIITDNLKQEEHAIVQVEEMQAVNAVLYGKYTMEGDQFDTVEVDFGRSEGNNIEQADGKKWSEQDRDTFDPTHDIDLYCDQASGLVNIAIMDGTVWRLLNGFKLFREKLDTRRGSNSQLETAVKDLGAVVSFKGYYGDLAIVVAKTSYVAEDGTEKRYLPEGMLVLGNTAAEGIRCYGAIKDAQALSEGVVASSRYPKHWLTVGDPSCEFTMTQSAPLMVLPDPDEFVVVQVK
1181924..1182307                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage accessory DNA packaging protein; Lambda FI homolog; SbBS512_E1292; phage(gi169257229)     2.98e-08            ShigellaboydiiCDC308394MATKEENLNRLRQLAGLLGREADMSGSAADIAQRVSEWEEELAVSPEGIMHSDESGADQNHTDDGEQLNNTDAPDDVKAVRVRKCLQVMGYCPETGRPVELALRGMCVLVPSSLATAMIQHGTAEYA
1182300..1182653                   PHAGE_Entero_DE3_NC_042057: RNA polymerase binding protein; SbBS512_E1293; phage(gi100043)     2.84e-52            ShigellaboydiiCDC308394MRDFQNAFDAALAGVDSTIVEVMGLCAQFTSGAQCGSEVQGVFDDPESLGFTGGGVRIEGSSPSLFVRTDTVRAVRRGDTLTINGEIFWVDRVSPDDGGSCYLWLNRGQPPAVNRRR
1182669..1183202                   PHAGE_Entero_DE3_NC_042057: ssDNA binding protein; SbBS512_E1294; phage(gi100044)     2.57e-77            ShigellaboydiiCDC308394MAIKGLDQAIDNLSRVRKNAIPAASAMAINRVATTVINQSSSQVARETKVRRKLVKERSRLKRATVRNPNAKIIVNRGDLPVIKLGIRMLGRRPNSILKAGQHRYQRAFIQRLKNGRWHVMQRVAGKNRYPIDVVKIPMAAPLKQAFDENVDRIRRERLPKELAYALKQQLRIAIKR
1183199..1183594                   PHAGE_Entero_DE3_NC_042057: loader of DNA helicase; SbBS512_E1295; phage(gi100045)     2.21e-73            ShigellaboydiiCDC308394MKHTDIRAAVLDALEQHEHGATLFDGRPVVFDEEDFPAIAVYLTDAEYTGEELDADTWRATLHIEVFLPAQVPDSELDQWMESRIYPAMTAIPALAGLITTMVTQGYEYRRDDDMALWSSADLTYSITYEM
1183602..1184354                   PHAGE_Entero_DE3_NC_042057: late promoter transcription; SbBS512_E1296; phage(gi100046)     1.95e-139           ShigellaboydiiCDC308394MATPNPLEPVKGAGTTLWVYNGKGDAYANPLSDDDWQRLAKVKDLTPGEMTAESYDDNYLDDEDADWTATGQGQKSAGDTSFTLAWKPGEEGQKGLIGWFESGDVRAYKIRFPNGTVDVFRGWVSSIGKAVTAKEVITRTVKVTNVGKPSVAEERSKITPVSAIKVTPTSGTVAKGKTTTLTVSFEPESATDKTFRAVSADPSKATISVKDMTITVNGVATGKVQIPVVSGNGQFAAVAEVTVTEAGAAG
1184368..1184799                   PHAGE_Entero_DE3_NC_042057: dsDNA binding protein; SbBS512_E1297; phage(gi100047)     9.23e-60            ShigellaboydiiCDC308394MFLKTEQFEYNGVSVTLSELSALQRIEHLALLKRRAEQAESCGNLQVSVEDLVRTGAFLVAMSLWHNHPQKTQSPSMNEAVMKIEQEVLTTWPADAIARAEDVVLCLSGMIEAVRPDTDITEVAKNNTLTDDDFSAGKSSTAS
1184826..1185239                   PHAGE_Entero_DE3_NC_042057: rnaseH; SbBS512_E1298; phage(gi100048)                   3.60e-59            ShigellaboydiiCDC308394MGRPDWRAMLAGMTSTEYADWHRFYRTHYFQDTQLDMHFSGLTYAVLSLFFCDPDMHPSDFSLLVPRHEEEQVERPDEDKMLMQKAAGLAGGVRFGGDGGRDILSSADVADVMVDDAALMMASAGIPGGVRYVPAGW
complement(1187844..1188146)       PROPHAGE_Shewan_MR-1: ISSod1, transposase OrfA; SbBS512_E1301; phage(gi24373865)     7.18e-11            ShigellaboydiiCDC308394MKKRNFSAEFKRESAQLVVDQKYTVADAAKAMDVGLSTMTRWVKQLRDERQGKTPKASPITPEQIEIRKLRKKLQRIEMENEILKKATALLMSDSLNSSR

#### region 9 ####
1303498..1303520                   attL                                                                                 N/A                 TGGTACATGGATATCGATACCAC
complement(1303657..1304787)       PHAGE_Entero_HK022_NC_002166: integrase; SbBS512_E1426; phage(gi9634144)             2.25e-66            ShigellaboydiiCDC308394MARPRKYKTDVPGLSPYFDKRNNKVYWRYRHPITGKNHGLGSIDQKLAETIAAEANSRLARQQMEQMLSLQEKIISDTGGSSTVTIFLNNYRKIQQERYENGEIKLNTLKQKAAPLRVFDERFGTRRLDAITVKDVVSVLEEYKARGHNRMGQIFRKVLIDVFREAQQTGDVPPGFNPAESAKKPQVRISRQRLTFDEWMMIYNAAEKDGYFLQRGMLLALMTGQRLSDICKMQFSDIRDGYLHVEQQKTGTRIAIPLALRCDKLNLTLDDVVSSCRDCVLSPWLLHHHHAKGTAKRGGMVKPATLTVAFKKARDSVDYNWRANGTPPSFHEQRSLSERLFREQGVDTKILLGHSNQKMTDIYNDARGKEWKKLVI
complement(1305078..1307549)       PHAGE_Salmon_118970_sal3_NC_031940: sliding clamp DNA polymerase; SbBS512_E1427; phage(gi100042)     3.57e-69            ShigellaboydiiCDC308394MSKVFICAAIPDEQAIKEDSAVAVATAIEAGDERRARAKFHWQFLEQFPAAQDCAYKFLVCEDKPGIPRPALDSWDAEYMQENRWDEESASFVPVETESDPMNVTFDKLAPEVQNAVMVKFDTCENITVDMVISAQELLQEDMATFDGHIVEALMKMPEVNAMYPELKLHAIGWVKHKCKPGAKWPEIQAEMRIWKKRREGERKETGKYTSVIDLARARTNQQHSENSTGKISPVIAAIHREYKQTWKTLDDELAYALWPGDVDAGNIDGSIHRWAKNEVIDNDREDWKRISASMRKQPDALRYDRQTIFGLVRERPIDIHKDPIALNKYICEYLTTKGVFENEETDLGTVDVLQSSETQTDAVETEVSDIPKNETAPEAEPSVEREGPFYFLFADKDGEKCGRANKLSGLDKALAAGATEITKEEYFARKNGTYTGLPQNVDTAEDSEQPEPIKVTADEVNKIMQAANISQPDADKLLAASRGEFVEGISDPNDPKWVKGIQTRDSVNQNQHESERNYQKAEQNSPNALQNEPETKQPEPVAQQEVEKVCTACGQTGGGNCPDCGAVMGDATYQETFDEEYQVEVQEDDPEEMEGAEHPHKENTGGNQHHDSDNETGETADRSIKVNGHHEITSTSRTCDHLMIDLETMGKNPDAPIISIGAIFFDPQTGDMGPEFSKTIDLETAGGVIDRDTIKWWLKQSREAQSAIMTDEIPLDDALLQLREFIDENSGEFFVQVWGNGANFDNTILRRSYERQGIPCPWRYYNDRDVRTIVELGKAIDFDARTAIPFEGERHNALDDARYQAKYVSVIWQKLIPSQADF
complement(1307830..1308018)       conserved domain protein; SbBS512_E1428                                              N/A                 ShigellaboydiiCDC308394METLLPNVNTSEGCFDIGVLLSNREFTEDAINMRKYEPYLLNDNSILSRIALLELGIFGERQ
1308590..1308868                   hypothetical protein; SbBS512_E1429                                                  N/A                 ShigellaboydiiCDC308394MDKKQIEALQSIIEEQDEAIRILSYRTDMILNMLSALTAALGGTKTNVYREVVIQQIDKFEKTIPGINAHLAEQEKDHALMAISSVALPKVE
complement(1309241..1309474)       PHAGE_Salico_CGphi29_NC_020844: hypothetical protein; SbBS512_E1430; phage(gi472340166)     4.03e-11            ShigellaboydiiCDC308394MTAGFNFNNYAAGFCSATPALRGNEVSMDTIDLGNSESLVCGVFPNQDGTFTAMTYTRSKTFKTEAGARRWLTRNTD
complement(1309659..1310078)       PHAGE_Entero_c_1_NC_019706: prophage repressor; SbBS512_E1431; phage(gi428781782)     6.65e-32            ShigellaboydiiCDC308394MDKYEFRRQQLIKIRDEKCDGKAVNVARKIGREPSYVSRMLYPEGKKGKKRIADDMVEIIEESFGLPRGWMDGIVSSSTNTASSYETRVLTPRQRIFLDLLDELPESEADKLLKTLEEKKQYYNMIYEEIRKKKAQNAS
1310444..1310869                   PHAGE_Entero_mEp237_NC_019704: CII protein; SbBS512_E1432; phage(gi435439306)        5.09e-06            ShigellaboydiiCDC308394MKIKHEHIRMAMNAWARPDGEKVPAAGITQAYFELGMTFPELYDDSHPEALARNTQKIFRWVEKDTPDAVEKMQALLPAIEKAMPPLLVARMRSHSSEYYREIVERRDRLVKDVDDFVASAVVLYDQMNRGGPAGNAVVMH
1310892..1311854                   PHAGE_Shigel_SfIV_NC_022749: replication protein; SbBS512_E1433; phage(gi557307567)     5.98e-126           ShigellaboydiiCDC308394MSSKLHGLVWEGCAFTGMILSRVAVMARLADYSNDEGVSWPAIETIRRQIGARSESTVKSAIAELAKEGWLTKEERKVGGRNVSNIYRLNVEKLEAAAAAARESYKPKRKISPAKNDPLTVDPSNIDPSTVDPSNFDGSTVDKKLPIRGAMIDPDPSVLKPDPSDKRSSCPDASQPDPQTAEQDFLTRHPDAVVFSAKKRQWGSQEDLVCAQWIWGRIVSLYEQAASYDGEITRPKEPNWTAWANDVRTMRMLDGRTHRQICEMFGRLQRDSFWVKNIMSPAKLREKWDELVIRLGRSPAQRCVNHISEPDTEIPPGFRG
1311861..1312607                   PHAGE_Shigel_POCJ13_NC_025434: DNA replication protein; SbBS512_E1434; phage(gi725949718)     7.73e-151           ShigellaboydiiCDC308394MKNIAAVGVLERIRRLAPQGSVPPYRTVEEWREWQLAEGRKRSEEINRQNRQLRVEKILNRSGIQPLHSKCSFANYQVQNDGQKYALSQAKSIADELMTGCTNFVFSGKTGTGKNHLAAAMGNRLMVKGRSVIIVTVSDVMSVLHDSYDNGKSGEKFLQELCGVDLLVLDEIGVQRETKNEQVVLHQIIDRRTASLCSVGMLTNLNHAAMSTLLGERIMDRMTMNGGRWVTFNWDSWRPNVSNMRVVK
1312629..1313399                   PHAGE_Shigel_Stx_NC_029120: hypothetical protein; SbBS512_E1435; phage(gi985761264)     1.78e-92            ShigellaboydiiCDC308394METVSDALKALKKASSHVVAARLGISREEAVNELWELKRKGVVDKTGHTWFLAGEGESRVTEERPVKSEAQDMLTGEVEQKVTADMMIEFIGQDGAKTCEELAGKFGVSTRKVASTLAVVTATGRLARVNQNGKFRYCMPGDNLPAEPKAALVTESDGKAFPQPAGAALPVREAATQEEIKTETVADIVQPLPSFTETQADELIFPSLRRANLALRRAKSDVQKWERVCAALRELNKHRDIVRQITDSSRRVVSEK
1313415..1313840                   PHAGE_Shigel_Stx_NC_029120: LygF; SbBS512_E1436; phage(gi985761265)                  3.86e-65            ShigellaboydiiCDC308394MAKVFTQEEREKIKGQVVELVRLSGRETLRQLEAKTGATRYLMSVLARELVASGDVYNSGYGLFPSEQARKDWQNARKKLSRAKVKKPAVVDPDLIWSLPDGEIRRYDRRLNIICRECRKSEAMQRVLAFYQGNVRYFRRY
complement(1313918..1314034)       hypothetical protein; SbBS512_E1437                                                  N/A                 ShigellaboydiiCDC308394MKSAIVINIFIGVMKIAQSVASEQGYREYMSKSGNIWF
1314015..1314680                   conserved hypothetical protein; SbBS512_E1438                                        N/A                 ShigellaboydiiCDC308394MTIADFKRPKLELPNGANKLLLHSCCAPCSGEVMEALQASGIDYTIFFYNPNIHPQKEYLIRKDENIRFAEQHGVPFIDADYDTDNWFERAKGMEWEPERGIRCTMCFDMRFERTALYAAENGFSVISSSLGISRWKNMQQVNECGRRAVAHYPGMVYWDYNWRKQGGSSRMIEISKREKFYQQEYCGCVYSLRDTNLHRKSQGRPLIKIGQLHYGKEEKE
1315515..1316570                   PHAGE_Shigel_SfIV_NC_022749: hypothetical protein; SbBS512_E1440; phage(gi557307571)     2.00e-110           ShigellaboydiiCDC308394MRVLLRPVLVPELGLVIVKPGRESMPVFHNTRVLVEPEPKSMRNLPSGVVPAVRQPLAEDKSLLPFFSDERVIRAAGGAGALSDWLLRHVKSCQWPHGDYHHSETVIHRYGTGAMVLCWHCDNQLRDQTSESLGQLAHQNLFAWMIDVIRHAMNGSQERELSLAELSWWAVRNQVADTLPEAVLRRSLGLRAEKIRSMYRESDIVPGEQTATSILKQRTKNLAPLPHAHQQNPPQEKTVVSIAVDPESPAQYLQRQKSQREEMPVYTRWVKTQKCMTCGNQADDPHHIIGHGLGGMGTKADDLFVIPLCRKCHSELHAGVKDFEEKHGSQLLLLIRFLMHARNSGVLKWKA
1316571..1316951                   PHAGE_Shigel_Stx_NC_029120: crossover junction endodeoxyribonuclease rusA; SbBS512_E1441; phage(gi985761276)     7.05e-47            ShigellaboydiiCDC308394MTERIEFVLPYPPTVNTYWRRRGSTYFVSKAGERYRRAVALIVRQQRLKLSLSGRLAIKIIAEPPDKRRRDLDNILKAPLDALTHAGLLMDDEQFDEINIVRAQPVSGGRLGVKIYPIMLEGQVKK
1316948..1317769                   PHAGE_Entero_HK225_NC_019717: late gene regulator Q; SbBS512_E1442; phage(gi428782441)     3.47e-115           ShigellaboydiiCDC308394MKLEDLPKYYSPKSPGLTDASASTSKDALSITDVMAAQGMTQNRAEMGFSAFLGKMGISMNDRERATELLTEYALSRCDRVAALRKLPAEIKPVVMRIMASYAFEDYARSAASKKQCPCCYGEKFIESVVFTNKVQYPDGKPPVWAKCTKGVYPSYWEEWKKVREVVKVACPECGGKGEVSTACKDCRGRGVAIHREESVKRGMPVIRDCQRCGGRGCERLPSTEAFNAICKVTSAITLDTWKKSVKRFYDTLVVRFDIEEAWAERQLKRVTR
1317909..1318193                   PHAGE_Entero_phiP27_NC_003356: hypothetical protein; SbBS512_E1443; phage(gi18249887)     1.32e-41            ShigellaboydiiCDC308394MAVNTCLSACWLFRQELLVCHVNRKREKDMLKQQDMTETARVVFNELSVTEPATVGEIAQNTYLSRERCQLILTQLVMAGLADYQFGCYRRLPQ
1318344..1319393                   PHAGE_Entero_phiP27_NC_003356: putative DNA methylase; SbBS512_E1444; phage(gi18249888)     0.0                 ShigellaboydiiCDC308394MLNTVKISSCELINADCLEFIRSLPENSVDLIVTDPPYFKVKPEGWDNQWKGDDDYLKWLDQCLAQFWRVLKPAGSLYLFCGHRLASDIEIMMRERFSVLNHIIWAKPSGRWNGCNKESLRAYFPATERILFAEHYQGPYRPKDAGYAAKGSALKQHVMAPLISYFRDARAALGITAKQIADATGKKNMVSHWFSASQWQLPNESDYLKLQALFARVAEEKHRRGELEKLHHQLVDTYTSLNRQYAELLSEYKHLRRYFGVTVQVPYTDVWTHKPVQFYPGKHPCEKPAEMLQQIISASSRPGDLVADFFMGSGSTVKAAMALGRRAIGVELETGRFEQTVREVQDLIV
1319443..1319518                   tRNA                                                                                 N/A                 GGCCCTTTAGCTCAGTGGTGAGAGCGAGCGACTCATAATCGCCAGGTCGCTGGTTCAAATCCAGCAAGGGCCACCA
1319525..1319603                   tRNA                                                                                 N/A                 ACCGCCATTAGCTCATCAGGAAAGAGCGCCAGCCTTCGAAGCTGGTTGCGCGGAGTTCGGGTCCCCGAAGGCGGTCCAT
1319615..1319693                   tRNA                                                                                 N/A                 TGCGTTGTTAGCTCAGCCGGACAGAGCAATTGCCTTCTAAGCAATCGGTCACTGGTTCGAATCCAGTACAACGCGCCAC
1320668..1322524                   PHAGE_Stx2_c_86_NC_008464: hypothetical protein; SbBS512_E1447; phage(gi116221995)     0.0                 ShigellaboydiiCDC308394MAFKHYDVVRAVSPSDLAKRLTQKLKEGWQPFGSPVAITPYTLMQAIAAEGDVVVSGATEPDWYYVIVLAGQSNAMAYGEGLPLPDSYDAPHPRIKQLARRNTVTPGGEVCVFNDIIPADHCLHDVQDMSTINHPRADLSKGQYGCVGQGLHIAKKLLPYIPNNAGILLVPCCRGGSAFTQGTEGTFSESTGASQDSARWGVGKPLYQDLLFRTKAALQKNPKNVLLAICWMQGEFDMTNASYAQQPAAFLAMVQQFRADLAGLAAQCHGGSPASVPWICGDTTYAWKQEHGTQYEVVYGAYKGKESQQIYFVPFMTDGSGVNTPTNNPSEDPDIAGSGYYGSASRTNKNWVSSNRPTHFSSWARRGIIPDRMATAILNVAGRTLAFISGKAPEIKPSPGGDTPSGPSDGDTSVRTVSLLPTAGEAAAQGWTITGGSVALEDGVFKVTKQSNKTWSLMHPVDDAVSLLTRGGRLSCKFRLSGALTNNQFGLGIYLYTDVALPDVVAMTGTGNPFLMSFFTQTTDGKLNLMHHRKAGNTKLGEFGNYSNDWQTLELVFTAGSATVTPKLNGVAGPAFQVIKDSLTLGLNALTLTDITKNAAYGVEIESLVLEINAPASS
1322675..1322890                   PHAGE_Shigel_Ss_VASD_NC_028685: holin lysis protein S; SbBS512_E1448; phage(gi966200466)     1.22e-45            ShigellaboydiiCDC308394MYQMEKITTGVSYTTSAVGTGYWFLQLLDRVSPSQWAAIGVLGSLLFGLLTYLTNLYFKIREDRRKAARGE
1322895..1323209                   PHAGE_Entero_mEp460_NC_019716: hypothetical protein; SbBS512_E1449; phage(gi428782371)     2.43e-70            ShigellaboydiiCDC308394MTQNYELIVKGIRNFENKVTVTLALRDKKRFDGEIFDLDISLDRVEGAALEFYEAAARRSIRQVFLDVAAGLCEGDELLPETRPCSEARYTIKINSSDNSITGC
1323265..1323798                   PHAGE_Entero_mEp460_NC_019716: endolysin; SbBS512_E1450; phage(gi428782372)          6.70e-128           ShigellaboydiiCDC308394MSAKIKYGLSAAVLALIAAGASAPQILDQFLDEKEGNHTTAYRDGSGIWTICRGATMVDGKPVIPGMKLSKEKCDQVNAIERDKALAWVERNIKVPLTEPQKAGIASLCPYNIGPGKCFPSTFYKRLNAGDRKGACEAIRWWIKDGGRDCRIRSNNCYGQVIRRDQESALACWGIDQ
1323954..1324253                   PHAGE_Entero_HK140_NC_019710: lysis protein Rz; SbBS512_E1451; phage(gi428782006)     3.31e-64            ShigellaboydiiCDC308394MQMRQRDVAELDARYTKELADANATIESLRADVSAGRKRLQVAATCAKSTTGASSMGDGESPRLTADAELNYYRLRSGIDKLTAQVNYLQEYIRTQCLK
complement(1325232..1326299)       conserved hypothetical protein; SbBS512_E1452                                        N/A                 ShigellaboydiiCDC308394MSQHQYYPQLKWKPAEYESLMLLDQTTLSGFTPIITIPDIDWDYENECYKKNLSSYLSDFGINLAASWKANRPVLLDVKYLDKHGSSRHHPLDMCIQDARVNGKEIIPVVSPAYSTNYIHAVQRNLINGLAISITPQTWHQFTSLVNHLNIHPSLIDVIIDFGDIQNATDSLKQQALSMVNTLSGQAPWRNLILSSTAYPASQAGIPQHQVHHIPRHEYDLWMYVVQNFSNGRTPSFSDYPTASSTITSVDPRFMSQYVSVRYSNDTSWIFVKGTAVKGNGWGQTKNLCTTLVSSPEYQVFGSKFSWGDDYIYQRSLGANKSGGSKEWRKVAHTHHITLVVRQLYWLAQTQPAKP
1326710..1327258                   PHAGE_Entero_DE3_NC_042057: RecA-like recombination protein; SbBS512_E1453; phage(gi100035)     5.39e-64            ShigellaboydiiCDC308394MKVNKKRLAEIFNVDPRTIERWQSQGLPCVSKGSKGIESVFDTAMAIQWYAQRETDIENEKLRKELADLRAAAESDLQPGTIDYERYRLTKAQADAQELKNAREDGVVLETELFTFILQRVAQEISGILVRVPLTLQRKYPDISPSHLDVVKTEIAKASNVAAKAGENVGGWIDDFRRTEGS
1327230..1329158                   PHAGE_Entero_DE3_NC_042057: DNA polymerase; SbBS512_E1454; phage(gi100036)           0.0                 ShigellaboydiiCDC308394MISDAQKAANAAGAIATGLLSLIIPVPLTTVQWANKHYYLPKESSYTPGRWETLPFQVGIMNCMGNDLIRTVNLIKSARVGYTKMLLGVEAYFIEHKSRNSLLFQPTDSAAEDFMKSHVEPTIRDVPALLELAPWFGRKHRDNTLTLKRFSSGVGFWCLGGAAAKNYREKSVDVVCYDELSSFEPDVEKEGSPTLLGDKRIEGSVWPKSIRGSTPKIKGSCQIEKAANESAHFMRFYVPCPHCGEEQYLKFGDDASPFGLKWEKNKPESVFYLCEHHGCVIHQSELDQSNGRWICENTGMWTRDGLTFFSAADNEIPPPRSITFHIWTAYSPFTTWVQIVYDWLDALKDPNGLKTFVNTTLGETWEEAVGEKLDHQVLMDKVVRYTAAVPSRVVYLTAGIDSQRNRFEMYVWGWAPGEEAFLVDKIIIMGRPDEEETLLRVDVAINKKYRHADGTEMTISRVCWDTGGIDGEIVYQRSKKHGVFRVLPVKGASVYGKPVITMPKTRNQRGVYLCEVGTDTAKEILYARMKADPTPADEATSYAIRFPDDPEIFSQTEAQQLVAEELVEKWEKGKMRLLWDNKKRRNEALDCLVYAYAALRVSVQRWQLDLAVLAKSREEETTRPTLKELAAKLSGGVNGYSR
1329142..1329348                   PHAGE_Entero_HK225_NC_019717: head-tail connector gpW; SbBS512_E1455; phage(gi428782379)     1.09e-17            ShigellaboydiiCDC308394MVTVAELQALRQARLDLLTGKRVVSVQKDGRRIEYTAASLDELNRAINDAESVLGTTRRRRRPLGVRL
1329345..1330937                   PHAGE_Entero_DE3_NC_042057: hypothetical protein; SbBS512_E1456; phage(gi100038)     0.0                 ShigellaboydiiCDC308394MKRTPVLIDVNGVPLRESLSYTGGGAGFGGQMAEWLPPSQSADAALLPALRLGNARADDLVRNNGIAANAVALHKDHIVGHMFLISYRPNWRWLGMRETAAKSFVDEVEAAWSEYAEGMFGEIDVEGKRTFTEFIREGVGVHAFNGEIFVQPVWDTESTQLFRTRFKAVSPKRVDTPGHGIGNRFLRAGVEVDRYGRAVAYHICEDDFPRSGSGRWERIPRELPTGRPAMLHIFEPVEDGQTRGANQFYSVMERLKMLDSLQATQLQSAIVKAMYAATIESDLDTEKAFEYIAGAPQGQKDNPLINILDKFSTWYDTNSVTLGGVKIPHLFPGDDLKLQTAQDSDNGFSALEQALLRYIAAGLGVSYEQLSRDYSKVSYSSARASANESWRYFMGRRKFIASRLATQMFSCWLEEALLRGIIRPPRARFDFYQARSAWSRAEWIGAGRMAIDGLKEVQESVMRIEAGLSTYEKELALMGEDYQDIFRQQVRESAEREKAGLSRPVWIAQAYQQQIAESRRPEEETTPRET
1330927..1332432                   PHAGE_Entero_DE3_NC_042057: RegA; SbBS512_E1457; phage(gi100039)                     1.09e-134           ShigellaboydiiCDC308394MRRNLSHIIAAAFNEPLLLEPAYARVFFCALGREMGAASLSVPQQQVQLDAPGMLAETDEYMAGGKRPARVYRVVNGIAVLPVTGTLVHRLGGMRPFSGMTGYDGIVACLQQAMADSQVRGILLDIDSPGGQAAGAFDCADMIYRLRQQKPVWALCNDTACSAAMLLASACSRRLVTQTSRIGSIGVMMSHVSYAGHLAQAGVDITLIYSGAHKVDGNQFEALPAEVRQDMQQRIDAARRMFAEKVAMFTGLSVDAVTGTEAAVFEGQSGIEAGLADELINASDAISVMATALNSNVRGGTMPQLTATEAAVQENQRVMGILTCQEAKGREQLATMLAGQQGMSVEQARAILAAAAPQQPVASAQSEADRIMACEEANGREQLAATLAAMPEMTVEKARPILAAAPLADAGPSLRDQIMALDEAKGAEAQAEKLAACPGMTVENARAVLAAGSGKAEPVSASTTALFEHFMANHSPAAVRGGVSQTSADGDADVKMLMAMP
1332469..1332816                   PHAGE_Entero_DE3_NC_042057: clamp-loader subunit; SbBS512_E1458; phage(gi100040)     4.12e-29            ShigellaboydiiCDC308394MVTKTITEQRAEVRIFAGNDPAHTATGSSGISSATPALTPLMLDEATGKLVVWDGQKAGSAVGILVLPLEGTETVLTYYKSGTFATEAIRWPDSVDEHKKANAFAGTALSHAALP
1332874..1333902                   PHAGE_Entero_DE3_NC_042057: clamp-loader subunit; SbBS512_E1459; phage(gi100041)     1.92e-145           ShigellaboydiiCDC308394MGLFTTRQLLGYTEQKVKFRALFLELFFRRTVNFHTEEVMLDKITGKTPVAAYVSPIVEGKVLRHRGGETRVLRPGYVKPKHEFNYQQAVERLLGEDPAQLNDPAYRRLRIITDNLKQEEHAIVQVEEMQAVNAVLYGKYTMEGDQFDTVEVDFGRSEGNNIEQADGKKWSEQDRDTFDPTHDIDLYCDQASGLVNIAIMDGTVWRLLNGFKLFREKLDTRRGSNSQLETAVKDLGAVVSFKGYYGDLAIVVAKTSYVAEDGTEKRYLPEGMLVLGNTAAEGIRCYGAIKDAQALSEGVVASSRYPKHWLTVGDPSCEFTMTQSAPLMVLPDPDEFVVVQVK
1333954..1334337                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage accessory DNA packaging protein; Lambda FI homolog; SbBS512_E1460; phage(gi169257229)     3.67e-08            ShigellaboydiiCDC308394MATKEENLNRLRQLADLLGREADMSGSAADIAQRVSEWEEELAVSPEGIMHSDESGADQNHTDDGEQLNNTDAPDDVKAVRVRKCLQVMGYCPETGRPVELALRGMRVLVPSSLATAMIQHGTAEYA
1334330..1334683                   PHAGE_Entero_DE3_NC_042057: RNA polymerase binding protein; SbBS512_E1461; phage(gi100043)     6.08e-53            ShigellaboydiiCDC308394MRDFQNAFDAALAGVDSTIVEVMGLCAQFTSGAQCGSEVQGVFDDPESLGFAGGGVRIEGSSPSLFVRTDTVRAVRRGDTLTINGEIFWVDRVSPDDGGSCYLWLNRGQPPAVNRRR
1334699..1335232                   PHAGE_Entero_DE3_NC_042057: ssDNA binding protein; SbBS512_E1462; phage(gi100044)     6.31e-78            ShigellaboydiiCDC308394MAIKGLDQAIDNLSRVRKNAIPAASAMAINRVATTAINQSSSQVARETKVRRKLVKERSRLKRATVRNPNARIIVNRGDLPVIKLGIRMLGRRPNSILKAGQHRYQRAFIQRLKNGRWHVMQRVAGKNRYPIDVVKIPMAAPLKQAFDENVDRIRRERLPKELAYALKQQLRIAIKR
1335229..1335624                   PHAGE_Entero_DE3_NC_042057: loader of DNA helicase; SbBS512_E1463; phage(gi100045)     2.21e-73            ShigellaboydiiCDC308394MKHTDIRAAVLDALEQHEHGATLFDGRPVVFDEEDFPAIAVYLTDAEYTGEELDADTWRATLHIEVFLPAQVPDSELDQWMESRIYPAMTAIPALAGLITTMVTQGYEYRRDDDMALWSSADLTYSITYEM
1335632..1336384                   PHAGE_Entero_DE3_NC_042057: late promoter transcription; SbBS512_E1464; phage(gi100046)     1.95e-139           ShigellaboydiiCDC308394MATPNPLEPVKGAGTTLWVYNGKGDAYANPLSDDDWQRLAKVKDLTPGEMTAESYDDNYLDDEDADWTATGQGQKSAGDTSFTLAWKPGEEGQKGLIGWFESGDVRAYKIRFPNGTVDVFRGWVSSIGKAVTAKEVITRTVKVTNVGKPSVAEERSKITPVSAIKVTPTSGTVAKGKTTTLTVSFEPESATDKTFRAVSADPSKATISVKDMTITVNGVATGKVQIPVVSGNGQFAAVAEVTVTEAGAAG
1336398..1336829                   PHAGE_Entero_DE3_NC_042057: dsDNA binding protein; SbBS512_E1465; phage(gi100047)     9.23e-60            ShigellaboydiiCDC308394MFLKTEQFEYNGVSVTLSELSALQRIEHLALLKRRAEQAESCGNLQVSVEDLVRTGAFLVAMSLWHNHPQKTQSPSMNEAVMKIEQEVLTTWPADAIARAEDVVLCLSGMIEAVRPDTDITEVAKNNTLTDDDFSAGKSSTAS
1336856..1337269                   PHAGE_Entero_DE3_NC_042057: rnaseH; SbBS512_E1466; phage(gi100048)                   3.60e-59            ShigellaboydiiCDC308394MGRPDWRAMLAGMTSTEYADWHRFYRTHYFQDTQLDMHFSGLTYAVLSLFFCDPDMHPSDFSLLVPRHEEEQVERPDEDKMLMQKAAGLAGGVRFGGDGGRDILSSADVADVMVDDAALMMASAGIPGGVRYVPAGW
1337250..1339823                   PHAGE_Entero_DE3_NC_042057: RNA polymerase sigma factor; SbBS512_E1467; phage(gi100049)     0.0                 ShigellaboydiiCDC308394MSQPVGDLVIDLSLDAVRFDEQMSRVRRHFSGLDTDARKTASAVEQGLSRQALAAQKAGISVGQYKAAMRTLPAQFTDIATQLAGGQNPWLILLQQGGQVKDSFGGMIPMFRGLAGAITLPMVGVTSLAVATGALAYAWYQGDATLSEFNKTLVLSGNQAGLTADRMLTLSRAGQAAGLTFNQARESLAALVNAGVRGGEQFDAINQSVARFASASGVEVDKVAEAFGKLTTDPTSGLMAMARQFRNVTAEQIAYVAQLQRSGDEAGALQAANDIATKGFDEQTRRLKENMGTLETWADKTGKAFKSMWDAILDIGRPESSADMLASAQKAFDEADKKWQWYQSRSQRRGKTSSFRANLQGAWDDRENARLGLAAATLQSDMEKAGELAARDRAERESSQLKYTGEAQKAYERLQTPLDKYTARQKELNKALKDGKILQADYNTLMASAKKDYESTLKKPSGVKVSAGERQEDRAHAALLALETELRTLEKHSGVNEKISQQRRDLWEAESQYVVLKEAATKRQLSEQEKSLLAHEKETLEYKRQLAELGDKIEHQKRLNELAQQAARFEQQQSAKQAAISAKARGLTDRQAQRESEEQRLREVYGDNPAALAKATSALKNTWSAEEQLRGSWMAGMKSGWSEWEESATDSMSQVKSAATQTFDGIAQNMAAMLTGSEQNWRSFTRSVLSMMTEILLKQAMVGIVGSIGSAIGGAVGGGASASGGTAIQAAAAKFHFATGGFTGTGGKYEPAGIVHRGEFVFTKEATSRIGVGNLYRLMRGYATGGYVGTPGSLADSRSQASGTFEQNNHVVINNDGTNGQIGPAALKAVYDMARKGARDEIQTQMRDGGLFSGGGR
1339820..1340149                   PHAGE_Entero_DE3_NC_042057: hypothetical protein; SbBS512_E1468; phage(gi100050)     9.43e-67            ShigellaboydiiCDC308394MKTFRWKVKPGMDVTSAPSVREVRFGDGYSQRAPAGLNADLKTYSVTLSVSREEATALESFLAEHGGWKAFLWTPPYGYRQIKVTCAKWSSQVSMLRVGFSAEFKQVVN
1340149..1340847                   PHAGE_Entero_DE3_NC_042057: hypothetical protein; SbBS512_E1469; phage(gi100051)     2.42e-168           ShigellaboydiiCDC308394MQDIRQETLNECTRAEQSASVVLWEIDLTEVGGERYFFCNEQNEKGEPVTWQGRQYQAYPIQGSGFELNGKGTSTRPTLAVSNLYGMVTGMVEDMQSLVGGTVVRRKVYARFLDAVNFVNGNRDADPEQEVISRWRIEQCSELSAVSASFVLSTPTETDGAVFPGRIMLANTCTWTYRGDECGYHGPAVADEYDQPTSDITKDKCSKCLSGCKFRNNVGNFGGFLSINKLSQ
1340852..1341595                   PHAGE_Entero_mEp460_NC_019716: tail fiber component; SbBS512_E1470; phage(gi428782332)     8.07e-178           ShigellaboydiiCDC308394MTETESAILAHARRCAPAESCGFVVRTPEGERYFPCVNISGEPEAYFRMAPEDWLQAEMQGEIVALVHSHPGGLPWLSEADRRLQVQSDLPWWLVCRGAIHKFRCVPHLTGRRFEYGVTDCYTLFRDAYHLAGIEMPDFHRGDDWWRHGQNLYLDNMEATGFYRVALTEAQPGDVLLCCFGSSVPNHAAIYCGDGELLHHIPEQLSKRERYTDKWQRRTHSLWRHREWHASAFTGICNDLAAASTFV
1341592..1342134                   PHAGE_Entero_DE3_NC_042057: hypothetical protein; SbBS512_E1471; phage(gi100053)     4.44e-97            ShigellaboydiiCDC308394MKTGAEAIRALATQLPAFRQKLSDGWYQVRIAGRDAGETELSSRLNEPLANGAVIHIVPRLAGAKSGGVFQAVLGAALIATAIWMPGISIAFSDILFSMGAAMTLGGVAQMLAPKARTPRTQTTDNGKQNTYFSSLDNMVAQGNVLPVLYGEMRVGSRVASQEISTADEGDGGQVVVIGR
1342421..1342546                   conserved hypothetical protein; SbBS512_E1472                                        N/A                 ShigellaboydiiCDC308394MGGYDVVLDIKKAGNGSSFTLYERVPALTPKIFADSVNACK
1343054..1346092                   PHAGE_Entero_DE3_NC_042057: recombination endonuclease subunit; SbBS512_E1474; phage(gi100054)     0.0                 ShigellaboydiiCDC308394MTEKDITIKGKTTSQYLASVVVDNLPPRPFNIRMRRMTPDSTTDQLQNKTLWSSYTEIIDVKQCYPNTALVGVQVDSEQFGSQQVSRNYHLRGRILQVPSNYNPQTRQYSGIWDGTFKPAYSNNMAWCLWDMLTHPRYGMGKRLGAADVDKWALYVIGQNCDQSVPDGFGGTEPRITCNAYLTTQRKAWDVLSDFCSAMRCMPVWNGQTLTFVQDRPSDKVWTYNRSNVVMPDDGAPFRYSFSALKDRHNAVEVNWIDPDNGWETATELVEDTQAIARYGRNVTKMDAFGCTSRGQAHRAGLWLIKTELLETQTVDFSVGAEGLRHVPGDVIEICDDDYAGISTGGRVLAVNSQTRTLTLDREITLPSSGTTLISLVDGQGNPVSVEVQSVTDGVKVKVSRVPDGVAEYSVWGLKLPTLRQRLFRCVSIRENDDGTYAITAVQHVPEKEAIVDNGAHFDGDQSGTVNGVTPPAVQHLTAEVTADSGEYQVLARWDTPKVVKGVSFLLRLTVTADDGSERLVSTARTTETTYRFTQLALGNYRLTVRAVNARGQQGDPASVSFRIAAPAAPSRIELTPGYFQITATPHLAVYDPTVQFEFWFSEKRITDIRQVETTARYLGTALYWIAASINIKPGHDYYFYVRSVNTVGKSAFVEAVGRASDDAEGYLDFFKGEIGKTHLAQELWTQIDNGQLAPDLAEIRTSITNVSNEITQTVNKKLEDQSAAIQQIQKVQVDTNNNLNSMWAVKLQQMKDGRLYIAGIGAGIENTPAGMQSQVLLAADRIAMINPANGNTKPMFVGQGDQIFMNDVFLKRLTAPTITSGGNPPAFSLTPDGRLTAKNADISGNVNANSGTLNNVTINENCRVLGKLSANQIEGDLVKTVGKAFPRDSRAPERWPSGTITVRVYDDQPFDRQIVIPAVAFSGAKHERENNDIYSSCRLIVRKNGAEIYNRTALDNTLIYSGVIDMPAGRGHMTLEFSVSAWLVNNWYPTASISDLLVVVMKKATAGISIS
1346160..1346759                   PHAGE_Entero_cdtI_NC_009514: putative Lom-like outer membrane protein; SbBS512_E1475; phage(gi148609401)     1.29e-135           ShigellaboydiiCDC308394MRKVCAVILSAAICLSVSGAPAWASEHQSTLSAGYLHARTNAPGSDNLNGINVKYRYEFTDALGLITSFSYANAEDEQKTHYSDTRWHEDSVRNRWFSVMAGPSVRVNEWFSAYSMAGVAYSRVSTFSGDYLRVTDNKGKTHDVLTGSDDGRHSNTSLAWGAGVQFNPTESVTIDLAYEGSGSGDWRTDAFIVGIGYRF
complement(1347408..1348157)       PHAGE_Entero_lambda_NC_001416: hypothetical protein; SbBS512_E1476; phage(gi9626267)     1.01e-15            ShigellaboydiiCDC308394MDAVVALPFAADACLVASSFEADADDADDAAELADDAAAVFEDSALVSDAFAFVSDVFAAEADLAAALACSAASPAFVVAVEADDAALSADFPAAVALAEACPALVDAALADNAAAVFESAAAEALCPAAVSEDLAFVSDVFAAFAEFAAAVAEEAALLALEAAFVSDDFAASFEADASRAEVAASDAFVVAVDAEVAADCCDAAAFVSDVFAALALVAAALFDDSAAAALFAASRAFVDAVPALEDAD
1348181..1348315                   hypothetical protein; SbBS512_E1477                                                  N/A                 ShigellaboydiiCDC308394MRRRQLRAKVRRNPRQRALRQRQNGQRILHPPWRLRMRARRKRG
1348276..1349886                   PROPHAGE_Escher_MG1655: Qin prophage; predicted side tail fibre assembly protein; SbBS512_E1478; phage(gi16129506)     8.77e-106           ShigellaboydiiCDC308394MALEDASTTKKGIVQLSSATNSTSESLAATPKAVKAAYELANGKYTAQDATTAQKGIVQLSNATNSTSEMLAATPKSVKAAYDLANGKYTAQDATTAQKGIVQLSSATNSASETLAATPKAVKAANDNANGRVPSARKVNGKALSADITLTPKDIGTLNSTTMSFSGGAGWFKLATVTMPQASSVVSITLIGGAGFNVGSPQQAGISELVLRAGNGNPKGITGALWQRTSTGFTNFAWVNTSGDTYDIYVAIGNYATGVNIQWDYTSNASVTIHTSPAYSANKPEGLTDGTVYSLYTPSEQFYPPGAPIPWPSDTVPSGYALMQGQTFDKSAYPKLAAAYPSGVIPDMRGWTIKGKPASGRAVLSQEQDGIKSHTHSASASSTDLGTKNTSSFDYGTKSTNNTGAHTHSLSGSTGSAGDHTHGNGIRWPGGGGSALAFYDGGGFTYVQDSQYQVSPGTSSRRLYYQRIQTQSAGAHTHSLSGTAASSGAHAHTVGIGAHTHSVAIGSHGHTITVNAAGNAENTVKNIAFNYIVRLA
1349886..1350470                   PROPHAGE_Escher_MG1655: Qin prophage; predicted tail fibre assembly protein; SbBS512_E1479; phage(gi16129505)     1.25e-132           ShigellaboydiiCDC308394MAFRMSEQARTIKIYNLLAGTNEFIGEGDAYIPPHTGLPANSTDIAPPDIPAGFVAVFNSDEASWHLVEDHRGKTVYDVASGDELFISELGPLPENVTWLSPEGEFQKWNGTAWVKDTEAEKMFRIREAEETKNNLMQVASEHIAPLQDAADLEIATEEETSLLEAWKKYRVLLNRVDTSTAPDIEWPTNPVRE
complement(1350525..1351181)       conserved hypothetical protein; SbBS512_E1480                                        N/A                 ShigellaboydiiCDC308394MKKNTDDGAKIYTPLTLKLYDWWVLGVSNRLAWGCPTKEHLLPHFLEHVGNNHLDIGVGTGFYLTHVPESSLISLMDLNEASLNAASTRAGESKIKHKISHDVFEPYPAALHGQFDSISMFYLLHCLPGNISTKSCVIRNAAQALTDDGTLYGATILGDGVVHNSFGQKLMRIYNQKGIFSNTKDSEEGLTHILSEHFENVKTKVQGTVVMFSASGKK
1351250..1351519                   PHAGE_Entero_HK630_NC_019723: tail fiber assembly protein; SbBS512_E1481; phage(gi428782810)     1.09e-25            ShigellaboydiiCDC308394MLPQHSDIEIAWYASIQQEPNGWKTVTTQFYIQEFSEYIAPLQDAVDLEIATEEERSLLEAWNKYRVLLNRVDTSTAPDIEWPANPVRE
1351589..1351804                   PHAGE_Entero_phiP27_NC_003356: hypothetical protein; SbBS512_E1482; phage(gi18249921)     1.00e-14            ShigellaboydiiCDC308394MVVIFALICSGGHGSMVRLPPVVMSAKSATARTTIAREDAEDHQVKLSAQKLEELLASMVKDEVDRNDGIY
1352120..1352142                   attR                                                                                 N/A                 TGGTACATGGATATCGATACCAC
complement(1352230..1352463)       putative IS1 encoded protein; SbBS512_E1483                                          N/A                 ShigellaboydiiCDC308394MPCFTAMRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYPLCHVLIDPVYYGVVFVRN
1352538..1353041                   PHAGE_Shigel_SfIV_NC_022749: IS1 transposase B; SbBS512_E1484; phage(gi557307573)     2.16e-110           ShigellaboydiiCDC308394MSRQCTHYGRWPQHGFMSLKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTLATLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHYLNIKHYQ

#### region 10 ####
1407002..1408267                   PHAGE_Mycoba_Lukilu_NC_041901: chaperone for tail fiber formation; SbBS512_E1538; phage(gi100190)     2.40e-09            ShigellaboydiiCDC308394MSNNEFHQRRLSATPRGVGVMCNFFAQSAENATLKDVEGNEYIDFAAGIAVLNTGHRHPDLVAAVEQQLQQFTHTAYQIVPYESYVTLAEKINALAPVSGQAKTAFFTTGAEAVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDLHGISTQDSLDAIECLFKSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKLFAMDHYADKPDLMTMAKSLAGGMPLSGVVGNANIMDAPAPGGLGGTYAGNPLAVAAAHAVLNIIDKESLCERANQLGQRLKNTLIDAKESVPAIAAVRGLGSMIAAEFNDPQTGEPSAAIAQKIQQRALAQGLLLLTCGAYGNVIRFLYPLTIPDAQFDAAMKILQDALSD
complement(1408387..1409364)       sigma-54 dependent transcriptional regulator PspF; SbBS512_E1539                     N/A                 ShigellaboydiiCDC308394MAEYKDNLLGEANSFLEVLEQVSHLAPLDKPVLIIGERGTGKELIASRLHYLSSRWQGPFISLNCAALNENLLDSELFGHEAGAFTGAQKRHPGRFERADGGTLFLDELATAPMMVQEKLLRVIEYGELERVGGSQPLQVNVRLVCATNADLPATVNEGTFRADLLDRLAFDVVQLPPLRERESDIMLMAEHFAIQMCREIKLPLFPGFTERARETLLNYRWPGNIRELKNVVERSVYRHGTSDYPLDDIIIDPFKRRPPEDAIAVSETTSLPTLPLDLREFQMQQEKELLQLSLQQGKYNQKRAAELLGLTYHQFRALLKKHQI
1409531..1410199                   phage shock protein A; SbBS512_E1540                                                 N/A                 ShigellaboydiiCDC308394MGIFSRFADIVNANINALLEKAEDPQKLVRLMIQEMEDTLVEVRSTSARALAEKKQLTRRIEQASAREVEWQEKAELALLKEREDLARAALIEKQKLTDLIKSLEHEVTLVDDTLARMKKEIGELENKLSETRARQQALMLRHQAANSSRDVRRQLDSGKLDEAMARFESFERRIDQMEAEAESHSFGKQKSLDDQFAELKADDAISEQLAQLKAKMKQDNQ
1410253..1410477                   phage shock protein B; SbBS512_E1541                                                 N/A                 ShigellaboydiiCDC308394MSALFLAIPLTIFVLFVLPIWLWLHYSNRSGRSELSQSEQQRLAQLVDEAKRMRERIQALESILDAEHPNWRDR
1410477..1410836                   phage shock protein C; SbBS512_E1542                                                 N/A                 ShigellaboydiiCDC308394MAGINLNKKLWRIPQQGMVRGVCAGIANYFDVPVKLVRILVVLSIFFGLALFTLVAYIILSFALDPMPDNMAFGEQLPSSSELLDEVDRELAASETRLREMERYVTSDTFTLRSRFRQL
1410845..1411066                   phage shock protein PspD; SbBS512_E1543                                              N/A                 ShigellaboydiiCDC308394MNTRWQQAGQKVKLGFKLAGKLVLLTALRYGPAGVAGWAIKSVARRPLKMLLAVALEPLLSRAANKLAQRYKR
1411141..1411455                   phage shock protein E; SbBS512_E1544                                                 N/A                 ShigellaboydiiCDC308394MFKKGLLALALVFSLPVFAAEHWIDVRVPEQYQQEHVQGAINIPLKEVKERIATAVPDKNDTVKVYCNAGRQSGQAKEILSEMGYTHVENAGGLKDIAMPKVKG
1411640..1411783                   putative sucrose phosphorylase; SbBS512_E1545                                        N/A                 ShigellaboydiiCDC308394MGSLPLKGNMKQKITDYLDEIYGGTFTATHLQKLVTRLEGNAANLLI
1411804..1411983                   IS1 transposase orfA; SbBS512_E1546                                                  N/A                 ShigellaboydiiCDC308394MLAWLPFPSDVLPAPLLKAWCVTAKALPDISAISALIAVKHGNYSSLTPPLSPVRTRKS
1412501..1412926                   putative sucrose phosphorylase; SbBS512_E1549                                        N/A                 ShigellaboydiiCDC308394MESLPRNDYAGVEKLGYNRAINRKKYHSKEITRELNDEATLRHAVYHELSRLITPRRSHNEFHPDNNFTIDTINSSVMRIQRSNADGNCLTGLFNVSKNIQHVNITNLHGRDLISEVDILGNEITLRPWQVMWIKVMTPNY
complement(1412920..1413297)       PHAGE_Shigel_SfIV_NC_022749: IS1 transposase B; SbBS512_E1548; phage(gi557307573)     6.60e-85            ShigellaboydiiCDC308394MDEQWGYVGAKSRQRWLFYAYDRLRKTVVAHVFGERTMATQGRLMSLLSPFDVVIWMTDGWPLYESRLKGKLHVISKCYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHYLNIKHYQ
1414464..1415369                   monomeric porin OmpG; SbBS512_E1552                                                  N/A                 ShigellaboydiiCDC308394MKKLLPCTALVMCAGMACAQAEEKNYWHFNIGAMYEIENVEGYGEDMDGLAEPSVYFNAANGPWRIALAYYQEGPVDYSAGKRGTWFDRPELEVHYQFLENDDFSFGLTGGFRNYGYHYVDEPGKDTANMQRWKIAPDWDVKLTDDLRFNGWLSMYKFANHLNTTGYADTRVETETGLQYTFNETVALRVNYYLERGFNMDDSRNNGEFSTQEIRAYLPLTLGNHSLTPYTRIGLDRWSNWDWQDDIECEGHDFNRVGLFYGYDFQNGLSVSLEYAFEWQDHDEGDSDKFHYAGVGVNYSF
complement(1415480..1416478)       PHAGE_Entero_DE3_NC_042057: hypothetical protein; SbBS512_E1553; phage(gi100002)     4.24e-20            ShigellaboydiiCDC308394MSPTIYDIARVAGVSKSTVSRVLNKQTNISPEAREKVLRAIEELQYQPNKLARALTSSGFDAIMVISTRSTKTTAGNPFFSEVLHAITAKAEEEGFDVILQTSHNPAEDLQKCESKIKQKMIKGIIMLSSPADESFFAQLDKYDIPVVVIGKVEGQYAHVYSVDTDNFGDSIALTDTLIESGHQNIACLHAPLDVHVSVDRVNGYKQSLAAHNIAVRDEWIVDGGYTHETALQAARELLSQSPLPEAVFATDSLKLMSIYRAAAEKNIAIPQQLAVVGYSNETLSFILTPAPGGIDVPTQELGQQSCELLFRLISGKPSPQNITVATHMTLK

#### region 11 ####
complement(1755777..1756526)       PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; SbBS512_E1913; phage(gi371496158)     3.42e-09            ShigellaboydiiCDC308394MSIVMQLQDVAESTRLGPLSGEVRAGEILHLVGPNGAGKSTLLARMAGMTSGKGSIQFAGQPLEAWSATKLALHRAYLSQQQTPPFAMPVWHYLTLHQHDKTRTELLNDVAGALALDDKLGRSTNQLSGGEWQRVRLAAVVLQITPQANPAGQLLLLDEPMNSLDVAQQSALDKILSALCQQGLAIVMSSHDLNHTLRHAHRAWLLKGGKMLASGRREEVLTPPNLAQAYGMNFRRLDIEGHRMLILTI
complement(1756526..1757077)       vitamin B12 transport periplasmic protein btuE; SbBS512_E1914                        N/A                 ShigellaboydiiCDC308394MQDSILTTVVKDIDGEVTTLEKYAGNVLLIVNVASKCGLTPQYEQLENIQKAWADRGFVVLGFPCNQFLEQEPGSDEEIKTYCTTTWGGTFPMFSKIEVNGEGRHPLYQKLIAAAPTAVAPEESGFYARMVSKGRAPLYPDDILWNFEKFLVGRDGLVIQRFSPDMTPEDPIVMESIKLALAK
complement(1757140..1758120)       vitamin B12 import system permease protein btuC; SbBS512_E1915                       N/A                 ShigellaboydiiCDC308394MLTLARQQQRQNIRWLLCLSVLMLLALLLSLCAGEQWISLGDWFTPRGELFVWQIRLPRTLAVLLVGAALAISGAVMQALFENPLAEPGLLGVSNGAGVGLIAAVLLGQGQLPNWALGLCAIAGALIITLILLRFARRHLSTSRLLLAGVALGIICSALMTWAIYFSTSVDLRQLMYWMMGGFGGVDWRQSWLMLALIPVLLWICCQSRPMNMLALGEISARQLGLPLWFWRNVLVAATGWMVGVSVALAGAIGFIGLVIPHILRLCGLTDHRVLLPGCALAGASALLLADIVARLALAAAELPIGVVTATLGAPVFIWLLLKARR
1758179..1758203                   attL                                                                                 N/A                 AAAGAAAAAAGGCCGCAGAGCGGCC
complement(1758329..1758658)       conserved hypothetical protein; SbBS512_E1916                                        N/A                 ShigellaboydiiCDC308394MNDDLERRVSCLESDVTEIKNNLITLTTRSESFATKSDVLEIREGLRLEMAESRQSLKSEMADLRQSLKVEMAEHRTELQKSFANQTWLLTGIVLSAMAVLVAVVTVIK
complement(1759131..1760258)       PHAGE_Salmon_SEN5_NC_028701: integrase; SbBS512_E1917; phage(gi966201588)            4.63e-105           ShigellaboydiiCDC308394MRLLGRSVPLSPLMGQKTHRLLKNPARLVHSPANHRTLGAWWSCNAGVSRMSIKSILGGYLLDMCPEGRKGKRIRKKFKTKSDAVLYERWVLAQQHNNEWKGNSIDRRPLSVLIDLWWKYHGQLMKSGHNTRLKLLRLSEAMDDPCVHKLNTTMLTELRVSRIEQGIQPSTINREIGALSAMFTALISSGHFLNDNPVQGLKGMKVKEREMGYLSKSECVQLLDALAENPDERLAVEILLSTGARWGEVAALEQRRVLHCRITFSKTKNSKNRTVPISESLFEKIKKRGGKLVFPTLDYSLVRDVIKTVAPDVPDGQAVHALHHTFASHFMMNGGNILTLQKILGHAKIQTTMIYAHLAPDYLQDAVRFNPLGGA
1760856..1761194                   PHAGE_Entero_P88_NC_026014: hypothetical protein; SbBS512_E1918; phage(gi744692704)     6.52e-68            ShigellaboydiiCDC308394MLKQRRNFRTGTERHANRFTTSASRSNIRYSLSDTHATQDGYPVKQIGEHTWLIEKAGIVIHKCPRNPFTGNRIFALSCGDNQCGQDFTLYEALRTIDRLLRGQSFIKQTDL
1761205..1761492                   PHAGE_Entero_P88_NC_026014: hypothetical protein; SbBS512_E1919; phage(gi744692705)     4.04e-46            ShigellaboydiiCDC308394MTKDHAQGVFIRFIDFRGELLLRASAIDGVTPAGKNGADEATYVYLNGTRLLVELPYQTVREIISEAEKARQVNGDEPYIEIICMDSEAEIQKAD
complement(1761711..1761977)       PROPHAGE_Shigel_301: insertion element IS2 transposase InsD; SbBS512_E1920; phage(gi24113121)     8.93e-56            ShigellaboydiiCDC308394MCHFKPKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLEI
1762037..1762339                   PROPHAGE_Shewan_MR-1: ISSod1, transposase OrfA; SbBS512_E1921; phage(gi24373865)     6.49e-11            ShigellaboydiiCDC308394MKKRNFSAEFKRESAQLVVDQKYTVADAAKAMDVGLSTMTRWVKQLRDERQGKTPKASPITPEQIEIRKLRKKLQRIEMENEILKKATALLMSDSLNCSR
1762730..1763056                   PHAGE_Entero_BP_4795_NC_004813: putative transposase OrfA protein of IS629; SbBS512_E1923; phage(gi157166066)     1.74e-74            ShigellaboydiiCDC308394MTKNTRFSPEVRQRAIRMVLESQGEYDSQWAAICSIAPKIGCTPETLRVWVRQHERDTGGGDGGLTTAERQRLKELERENRELRRSNDILRQASAYFAKAEFDRLWKK
1763053..1763943                   PHAGE_Entero_BP_4795_NC_004813: putative transposase OrfB; SbBS512_E1924; phage(gi157166067)     0.0                 ShigellaboydiiCDC308394MMPLLDKLRKLYGVGPVCSELHIAPSTYYHCQEQRHHPDKRSARAQRDDWLKKEILRVYDGNHQVYGVRKVWRQLLREGIRVARCTVARLMAVMGLAGVLRGKKVRTTISRKAVAAGDRVNRQFVAERPDQLWVADFTYVSTWQGFVYVAFIIDVFAGYIVGWRVSSSMETTFVLDALEQALWARRPSGTVHHSDKGSQYVSLAYTQRLKEAGLLASTGSTGDSYDNAMAESINGLYKAEVIHRKSWKNRAEVELATLTWVDWYNNRRLLERLGHTPPAEAEKAYYASIGNDDLAA
1763997..1764518                   PHAGE_Shigel_Sf6_NC_005344: putative transposase OrfB; SbBS512_E1925; phage(gi41057343)     1.34e-126           ShigellaboydiiCDC308394MTEPNQVWCGDVTCIWTGKRWAYLAVVLDLFARKPVGWAMSFSPDSRLTMKALEMAWETRGKPGGVMFHSDQGSHYTSRQFRQLLWRYQIRQSMSRRGNCWDNSPMERFFRSLKNEWMPVVGYVSFSEAAHAITDYIVGYYSALRPHEYNGGLPPNESENRYWKNSNSVASFC
1764515..1765132                   PHAGE_Entero_P88_NC_026014: recombinase; SbBS512_E1926; phage(gi744692717)           4.12e-147           ShigellaboydiiCDC308394MTTSNRKKANVMRPVEYQNGEAFTIRNVRVMPESIPAGFKALADMSPFESLLIVDLGGTTLDVAKVQGQLAGISQVFCDPHVGVSLMADAVLSVMATNGMRTSHHIANTIIEHRHDEAWLRQHIHNDAHYASLMAVIREKEETLKQRVIRALAGFSGYGRVMVVGGGAEIVAPAIREACGVNATFIADGVPQFALVNGLYAMDKE
1765137..1765448                   PHAGE_Entero_P88_NC_026014: chromosome partitioning protein; SbBS512_E1927; phage(gi744692718)     2.13e-65            ShigellaboydiiCDC308394MTTPTRRISFYLKPTAVKNEGEACAWLDSLTPEARKSGQRVAFLAGLALLKMNPAEAYRLAAWAGDEALSVTQTRTERPTSQPVSTAQITSQMAGNIRALFPE
1765512..1766102                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; SbBS512_E1928; phage(gi23505476)     2.08e-42            ShigellaboydiiCDC308394MSEINYQALRERYSPVPVPKCPICGEEMSIQRISGAQVVYACSGYGDDGDFKIGRTLADEHYEKSRVTVLDVGDPEVLALLDWLETKDNRIAELEKIATDYALKFQKAQDALKHAALLHSRTAQQTNNFAVSLPDISEYFINDVFQPLRYERDVERAIIKAGGKALWQEKHEDRTHQSCDVNCGWFSPLTTDKNNT
1766396..1766524                   PHAGE_Entero_P88_NC_026014: hypothetical protein; SbBS512_E1929; phage(gi744692722)     5.17e-17            ShigellaboydiiCDC308394MKGKAVKIALRRREHAVNAVGLRKSLTVDGGDKLEGVVKLSD
1769544..1770428                   PHAGE_Entero_P88_NC_026014: capsid scaffolding protein; SbBS512_E1933; phage(gi744692725)     6.04e-113           ShigellaboydiiCDC308394MANEKKTSRKKFRVAVSGSTVDGREISPVHLREAAENFNPDVYAARVNVEHYLSPCPSSEFSAMGDVTALSTEDITEGPLAGRTALYAEIEPTERMKQLVADGKKIYSSIELHPQFSVNGRAYLVGLAMTDTPASLGTERLKFTAQQRQAVMTFNSIQGEGEGRMSNTFKFSSRSEKNLQGINPDLVKVTRRALEISEVDFGITEGLRSRYRQKQLVATGKSQTMNSRHLTGHAVDVVAYIGSQVSWEWPLYEKIAAAFRQASRELNIPVEWGGDWKTLKDGPHFQLPHGAYPA
1770425..1770832                   PHAGE_Entero_P88_NC_026014: hypothetical protein; SbBS512_E1934; phage(gi744692732)     1.76e-93            ShigellaboydiiCDC308394MKLWPTLGVAFLLTAGWGTSMRLSWSLGRENARNEAQASTLKSTADTLNIISAGVQDMQQVLAQLRVENQQRNQDGEVRREQLRNDIAKDECAHALPDARFTDRLRRHAERATASAVSPAYTADADHTGNASPLP
1770970..1771437                   PHAGE_Entero_P88_NC_026014: tail completion protein; SbBS512_E1935; phage(gi744692733)     9.23e-112           ShigellaboydiiCDC308394MLKTDSLREAMTRSCRWCQANPEKFTIFVESGNIETTGETPSFVYRYQMVMFVMDYAGELDDLTLPLLAWLSENQPQLLLNPERNQDIKFSAVINDDDSADLLFTLPLRERVRITRSSQGTPQAEHLLEPKPRLPSSEGDWSHVFQDVTWGESDG
1771430..1772065                   PHAGE_Entero_P88_NC_026014: tail protein; SbBS512_E1936; phage(gi744692734)          1.91e-149           ShigellaboydiiCDC308394MDKAFTRVDETFEAIRDSLNQQAINNIARKLAQDLRRAQQARIRSQKAPDGTAWTPRRRHVTRIQERIRFIWNNEARTLKNWHHDTGKYGRTITGWDEDKNSIRTFYRDDIDRFLEIRTRRINQDSTKRVPMFVKLRTARYLKARADASGVTVGYSGVAARIARVHQFGERDQVAPGIFTDYPVRELLGISQADERPIYNTVLGRIAEAVR
1772062..1772643                   PHAGE_Entero_P88_NC_026014: baseplate assembly protein V; SbBS512_E1937; phage(gi744692735)     1.12e-135           ShigellaboydiiCDC308394MSAELMRLLSNIIRTGIISEVDEKSWRVRVRSGELETGWLRWNTTRAGAFNVWLPPSPGEQVVIACIGGNPETAMIIGSLWSDAIPAPGKSLKEIVVSAPDGAVFRYDADAGALSASGMKTATLQASVSVTLDTPVVECTDLLRTATLDVTKGGKMSGNITHSGGNFTSNGITVHTHKHGGVKGGSDSTGGPQ
1772640..1772990                   PHAGE_Entero_P88_NC_026014: lysozyme family baseplate assembly protein; SbBS512_E1938; phage(gi744692736)     1.65e-80            ShigellaboydiiCDC308394MTTRYTGMNPDGTGNLNDMEHLKQSVRDILTTPLASRVMRREYGSLVPDLIDEPMNNTTRLQCMSAAVIALTRWEPRIALDAIDVVWKAGGRAGVTLSGTVMQTMQNVELTITLRE
1773884..1774414                   PHAGE_Entero_P88_NC_026014: tail protein; SbBS512_E1940; phage(gi744692738)          2.08e-117           ShigellaboydiiCDC308394MSNSLLPPSASNFMRCAEAVGTRITDIPVDLNTLWSPDTCPVHLLPYLAWAFSVDRWDRNWPEETKRQVIRDAWLIHRHKGTISALRRAIEPLGYLIRVSEWWEFGGEPGTFTVEVGTLDSGVTEEMYLEMERLIADARPVSRHMTGLNIIQEIPGDIFAAAATYDGEVITIYPGD
1774417..1776129                   PHAGE_Entero_P88_NC_026014: tail fiber protein; SbBS512_E1941; phage(gi744692739)     0.0                 ShigellaboydiiCDC308394MSTTTRKFKTIITDTGAKKLAQVAAPDGKPVRLTHMAVGDGGGTLPTPDSKQTRLVHEVWRHTVNRVILDATHQNRIIAELVIPPETGGFWIREIGVFDEHGDLIAVGNTAESYKPAVAEGSGRAQTFRTILTVSSTATVALTVDNTMVMATVDYVDDKLKEHEQSRRHPDASLTAKGFVQLSSATNSVSETQAATPKAVKAAYDLANGKYTAQDASTTRKGLVQLSSATNSTSETQAATPKAVKAAYDLANAKYTAQDATTAQKGIVQLSSATNSTSETLAATSKAVKAVMDETNKKAPLNSPALTGTPTTPTARQGTNNTQIASTAFVMAAIAALVDSSPDALNTLNELAAALGNDPNFATTMTNALAGKQPKDATLTALAGLATAADRFPYFTGNDVASLATLTKVGRDILAKSTVAAVIEYLGLRELGTSGEKIPLLSTANTWTNRQTFSGGLSGELSGNAATATKLKTARKIAGVGFDGSSDISISAKNVNAFALRQTGNTVNGDTSIGWNWDSSAYNALIGGASALILHFNINAGSCPAVQFRVNYKNGGISYRSAHDGYGVEW
1776500..1776877                   PHAGE_Shigel_SfIV_NC_022749: IS1 transposase B; SbBS512_E1943; phage(gi557307573)     4.00e-87            ShigellaboydiiCDC308394MDEQWGYVGAKSRQRWLFYAYDRLRKTVVAHVFGERTMATLGRLMSLLSPFDVVIWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHYLNIKHYQ
complement(1777354..1778538)       PHAGE_Entero_P88_NC_026014: tail sheath monomer; SbBS512_E1945; phage(gi744692749)     0.0                 ShigellaboydiiCDC308394MSETRFHGARVTENTDLVTAINDVDSSVIGIVATADDADAKLFPLNKPTLLTRVNDVLGKCGTTGTLYRALKAIADQVSTKVIVVRVAEHKEEDGKTQDQLVIGGSEDDGSYTGMYALLVAEQDESIGYRPRILAAPELDTEAVTKSLCVIADKLRAFVYASCHGCNTMAEAITYRQKFNEREVMLLWPDFIAYNPKNGKNETFPAPAYACGLRAYIDHEQGWHKSLSNVPVKNVLGMSRHVFWSLQAEDSDANSLNNKEITTIIRRNGVRFWGNRTPETNAYIFEVYTRTAQVLADSIAEAQFETIDSPLTPANVKDVISAIRAKLDSLVTAGKLIGAECWYDVVDNSTTDLRQGRVRIRYKYTPVPPLEDMELYQTFTDEYFEPAFAVLGGA
1778518..1778649                   PHAGE_Entero_P88_NC_026014: hypothetical protein; SbBS512_E1946; phage(gi744692750)     5.95e-25            ShigellaboydiiCDC308394MKTSFTHSFSPLYPLNDSATIITHHARNLTPAPFSRHGDNKKQ
1786944..1786968                   attR                                                                                 N/A                 AAAGAAAAAAGGCCGCAGAGCGGCC

#### region 12 ####
complement(2286597..2286815)       PHAGE_Salmon_RE_2010_NC_019488: OGR regulator of late gene transcription; SbBS512_E2486; phage(gi418489727)     2.98e-27            ShigellaboydiiCDC308394MMICPLCGSAAHTRSSFQVSSLTKERYNQCQNINCSHTFVTHETFVRSIATPKESNPVQPHPMKSGQVALSL
complement(2286906..2288006)       PHAGE_Salmon_RE_2010_NC_019488: gene D protein; SbBS512_E2487; phage(gi418489726)     0.0                 ShigellaboydiiCDC308394MNFSSELLNKGNKTPAFSISIEGRDITTVLDNRLMGLTLTDNRGFEADQLDLELDDADGKIVLPRRGAVITLALGWKGQPLFPKGAFTVDEIEHTGAPDRLTIRARSADFRETLNTRREKSWHKTTVGEVVKEIAARHKLKMALGEDLSDKLVEHIDQTNESDGSFLMRLARQYGAIASVKNGNLLFIRQGQGKSASGKPLPVITITRKDGDSHRFTLADRGAYTGVIASWLHTREPAKKESTTVKRKRRTKKQKKEPEAKQGDYLVGTDENVLVLNRTYANRSNAERAAKMQWERLQRGVASFSLQLAEGRADLYTEMPVKVSGFKQPIDDAEWTITTLTHTVSPDNGFTTSLELEVRIDDFEME
complement(2288003..2288488)       PHAGE_Salmon_RE_2010_NC_019488: tail protein; SbBS512_E2488; phage(gi418489725)      2.67e-98            ShigellaboydiiCDC308394MMMVLGLYVFMLRTVPYQELQYQRSWRHAANSRVNRRPSTQFLGPDNDMLTLSGVLMPEVTGGRLSLLALEQMAEQGKAWPLIEGSGTIYGMYVIEGLNQTKTEFFRDGMPRRIEFTLSLKRVDESLSDMFGDLSAQLNNLQGTATSALSDISKTVGGLLS
complement(2288485..2291562)       PHAGE_Salmon_RE_2010_NC_019488: tail tape measure protein; SbBS512_E2489; phage(gi418489724)     0.0                 ShigellaboydiiCDC308394MSDNNLRLQVILNAVDKLTRPFRSAQASSRELAAAVKKSRDAIKQLDQAGSSLDSFRKLQAENQKLGDRLNYARQRANLLSQELGAMGPPSQRQVVALGRQRLAVQRLEERQKKLQQQTALVRAELYRAGISANDGASATARITRETMRYNRQLSEQEARLRRVGEQQRKMHAARGAYARRLEVRDRIAGAGATTTAAGLAMGAPVMAAVKSYTSMEDAMKGVAKQVNGLRDDNGNRTARFYEMQGAIKAASEQLPMENGAVDFAALVEGGARMNVANPDDSWEDQKRDLLAFASTAAKAATAFELPADELSESLGKIAQLYKIPTRNIEQLGDALNYLDDNAMSKGADIIDVMQRLGGVADRLDYRKAAALGSTFLTLGAAPEVAASAANAMVRELSIATMQSKSFFEGMNLLKLNPEVIEKQMTKDAMGTIQRVLEKVNALPQDKRLSAMTMLFGKEFGDDAAKLANNLPELQRQLKLTAGNDALGSMQKESDINKDSLSAQWLLVKTGAQNTFSSLGETLRQPLMDILYTVKSVTGALRRWVEANPELTGTLMKVAAVVAAVTVGLGTLAVALAAVLGPLAVIRLGFSVLGIKTLPSVTAAVTRTSNALSWLAGAPLALLRRGLASSGNAAGLLTAPLSSLRRTASLTGNVLKTVAGAPVALLRSGLSGLRAVAVMFMNPLAVLRGGLAATGTVLRMLASGPLAMLRVALYAVSGLLGALLSLIGLVVTALAGVALVVWKYWQPITAFLGGVVEGFKAAAGPVSAAFEPLKPVFQWIGDKVQALWGWFTDLLTPVKSTSAELQSAAAMGRRFGEALAEGLNMVMHPLDSLKSGVSWLLEKLGIVSKEAAKAKLPESVTRQQPATVNADGKVMMPSGGFPSWGYGFAGMYDSGGYIPRGQFGIVGENGPEIVNGPANVTSRRNTAALAAVVAGMMGVAATPAELPPLHPLALPAKGGEAMVSRAATVPPVQRIEAPMQIIIQTQPGQSAQDIAREVARQLDERERRLKAKARSNYSDQGGYDA
complement(2291689..2291991)       PHAGE_Salmon_RE_2010_NC_019488: tail protein E; SbBS512_E2491; phage(gi418489722)     2.95e-57            ShigellaboydiiCDC308394MSDKQTEKTIQLDTPIMRGKTEITEIVLRKPQSGALRGTRLQAIMDMDVNAMMTVIPRISSPALTAQEIAEMDPADLTAMSVEVVTFLLKKSVLAGLPTA
complement(2292046..2292561)       PHAGE_Salmon_RE_2010_NC_019488: major tail tube protein; SbBS512_E2492; phage(gi418489721)     2.71e-116           ShigellaboydiiCDC308394MALPRKLKHLNLFNDGNNWQGIVESLTLPKFTRKYEKYRGGGMPGAVDVDLGLDDSALDTEFSIGGTELLLFKQMGKATVDGIQLRFTGSIQRDDTGEVQAVELVVRGRHKEVDSGEWKTGESNTTKVTSTNSYAKLTINGEVLYEVDLINMVEIVDGVDLMEAHRNALGL
complement(2292571..2293743)       PHAGE_Salmon_RE_2010_NC_019488: major tail sheath protein; SbBS512_E2493; phage(gi418489720)     0.0                 ShigellaboydiiCDC308394MAQDYHHGVRVVEVNEGTRSITTVSTAIVGMVCTGDDADAKMFPLNKPVLITDVLTASGKAGESGTLARSLDAIADQAKPVTVVVRVPQGETEEETTTNIIGAVTAEGKKTGMKALLSAQSQLGVKPRILGVPGHDTKAVATELLSVAQSLRGFAYLSAYGCKTVQEAITYRENFSQREGMLIWPDFTGWDTVLNAEATAYATARALGLRAKIDEQTGWHKSLSNVGVNGVTGISADVFWDLQDPATDAGLLNQNDITTLIRKDGFRFWGSRCLSDDPLFAFENYTRTAQVLMDTMAEAHMWAVDKPLNPSLARDIIEGIRAKMRSLVSQGYLIGGDCWLDESVNDKDTLKAGKLTIDYDYTPVPPLENLMLRQRITDQYLVNFSSQVSA
complement(2293806..2294183)       PHAGE_Shigel_SfIV_NC_022749: IS1 transposase B; SbBS512_E2494; phage(gi557307573)     3.18e-86            ShigellaboydiiCDC308394MDEQWGYVGAKSRQRWLFYAYDRLRKTVVAHVFGERTMATQGRLMSLLSPFDVVIWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHYLNIKHYQ
complement(2294908..2296254)       PROPHAGE_Escher_MG1655: IS4 transposase; SbBS512_E2496; phage(gi16132099)            0.0                 ShigellaboydiiCDC308394MFPDFFMHIGQALDLVSRYDSLRNPLTSLGDYLDPELISRCLAESGTVTLRKRRLPLEMMVWCIVGMALERKEPLHQIVNRLDIMLPGNRPFVAPSAVIQARQRLGSEAVRRVFTKTAQLWHNATPHPHWCGLTLLAIDGVFWRTPDTPENDAAFPRQTHAGNPALYPQVKMVCQMELTSHLLTAAAFGTMKNSENELAEQLIEQTGDNTLTLMDKGYYSLGLLNAWSLAGEHRHWMIPLRKGAQYEELRKLGKGDHLVKLKTSPQARKKWPGLGNEVTARLLTVTRKGKVCHLLTSMTDAMRFPGGEMADLYSHRWEIELGYREIKQTMQLSRLTLRSKKPELVEQELWGVLLAYNLVRYQMIKMAEHLKGYWPNQLSFSESCGMVMRMLMTLQGASPGRIPELMRDLASMGQLVKLPTRRGRAFPRVVKERPWKYPTAPKKSQSVA

#### region 13 ####
2393355..2395166                   PHAGE_Phage_Gifsy_1_NC_010392: leucine-rich repeat protein; SbBS512_E2592; phage(gi169257209)     4.75e-05            ShigellaboydiiCDC308394MLRNISSCLFPHISTITSPNHYLSEWDDWEKQGLPEEQRTEAVRRLRACLTSKGHKLDLRALALSSLPVLPACIKKLDVSCNKLTILTDLPENIKELIARDNFLTHISALPHYLITLDVSENQLENLPLLPDTIKSLSAEYNRLSTLPSLPLNLKKLEVRNNELQTLPSLPSNLKILKVAHNHLTELPPLPRRLQLLFAYSNRLSNLPNIQENIIMRRFFYFENNQITTIPTNLFRLDPHITIEIANNPLSDQTLLFLIQQTSVPNFNGPQFRISLSDQNRLFLRQMLPQNLHSRHIRVITEGGQNFQIPPLPETVAAWFPEADRREVSTQWTSFSTEENSRAFSAFLDRLSDTVSARNTSGFREQVAAWLEKLSASAELRQQSFTVAADATESCEDRVALTWNNLRKTLLVHQASEGLFDNDTGALLSLGREMFRLEILEDIARDKVRTLHFVDEIEVYLAFQTMLAEKLQLSTAVKEMRFYGVSGVTANDLRTAEAMVRSREENEFTDWFSLWGPWHAVLKRTEADRWALAEEQKYEMLENEYPQRVADRLKASGLSGDADAEREAGAQVMRETEQQIYRQLTDEVLALRLPENGSQLHHS
complement(2395920..2397326)       PHAGE_Entero_phiP27_NC_003356: putative tail fiber protein; SbBS512_E2594; phage(gi18249920)     3.22e-65            ShigellaboydiiCDC308394MPQLKGVIKTPTGEPLDGATITLTSIHNRAGILKSVFSHVTTQNGEYDFPVLPGVYSVRLTQSTRRLSEIGVIRVYEDSTDGSLNDFLGATNIDLRPESLKKFEELAQQAQQSAGSAAGNARQTAQDVTAAATARDDAQRFAEKARQDATVTAENRKATAEDVTSTGANAAAAGQSAQDAAGYARAAEQAKNDIDAALTGTLKMANHLSEIAAAGEKAQQKSRDNLGLKSAATMEAQSDIYDRTKGRLAIPGAFGFGCAFLPEDVIRFDTKSDFLAWVRNALPGEYSVAGPYDIIIPDTRFEGVLSIRWTDARPETTEPRYRAKSLTFYGINGPIYHTRYCYWPISRLTGWVKINITTEDIIYRIVASSVRNRWGDPDIGGLIIAAYQGEADVDKVIRLVRRQSYRGSRLGPVGISVPSTPTGTYIASPQFFITGCSEHSLPGSYCALSGVPDAHVSGAMPGLFIRTS
complement(2397313..2397855)       PHAGE_Entero_SfMu_NC_027382: tail fiber assembly protein; SbBS512_E2595; phage(gi849255280)     1.18e-53            ShigellaboydiiCDC308394MHLKNITAGNPKTAEQYQMTKKYDITWLFSEDDKNWYEELKNFASDTIKIAYTGDGRVVWVGKDVTGIEPRNASVIEVPDITANRRITAPGYWFYRNDEFVFDYRLKAEDERDALLAQVRARTGEWEEDLLLGLISDEDKEKLKACRIYAKSLQAMDFSTITDKATYNAINWPERPDAAA
2398271..2399176                   PROPHAGE_Escher_MG1655: IS2 transposase TnpB; SbBS512_E2596; phage(gi16132094)       0.0                 ShigellaboydiiCDC308394MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLEI
complement(2399197..2399316)       PHAGE_Entero_SfMu_NC_027382: tail fiber protein; SbBS512_E2597; phage(gi849255282)     1.24e-14            ShigellaboydiiCDC308394MSGISISDTGRNSADNVNGVYYRPLQKLINGTWYNVASI
2399431..2399733                   PROPHAGE_Shewan_MR-1: ISSod1, transposase OrfA; SbBS512_E2598; phage(gi24373865)     7.18e-11            ShigellaboydiiCDC308394MKKRNFSAEFKRESAQLVVDQKYTVADAAKAMDVGLSTMTRWVKQLRDERQGKTPKASPITPEQIEIRKLRKKLQRIEMENEILKKATALLMSDSLNSSR
complement(2400624..2400860)       PHAGE_Shigel_Sf6_NC_005344: gene 56 protein; SbBS512_E2600; phage(gi41057344)        6.69e-05            ShigellaboydiiCDC308394MLHAYSEGASRLSLPEGTLGQWVTAARKGLGTPGSRTVAELESEILQLRKALNEARLERDILKKATAYFAQESLKNTR
complement(2400883..2402421)       PHAGE_Stx2_c_1717_NC_011357: transposase; SbBS512_E2601; phage(gi209447153)          0.0                 ShigellaboydiiCDC308394MSSSLPDDINALKRLLAEQEALNRALLEKLNEREREIDHLQAQLDKLRRMNFGSRSEKVSRRIAQMEADLKALQKESDTLTGRVDDPAVQRPLRQTRTRKPFPESLPRDEKRLLPAASCCPECGGSLSYLGEDAAEQLELMRSVFRVIRTVREKHACTQCDAIVQAPAPSRPIERGIAGPGLLARVLISKYAEHTPLYRQSEMYGRQGVELSRSLLSGWVDACCRLLSPLEEALQDYVLTDGKLHADDTPVPVLLPGNKKTKTGRLWTYVRDDRNAGSTLAPAVWFAYSPDRKGIHPQTHLAGFSGVLQADAYAGFNELYRDGRITEAACWAHARRKIHDVHVRTPSALTEEALKRIGELYAIEAEIRGMTAEQRLAERQLKTKPLLKSLESWLREKMKTLSRHSELAKAFAYALNQWPALTYYADDGWAEADNNIAENALRMVSLGRKNYLFFGSDHGGERGALLYSLIGTCKLNGVEPESYLRYVLDVIADWPINRVGELLPWRVALPTE
complement(2402470..2402817)       PHAGE_Stx2_c_1717_NC_011357: transposase; SbBS512_E2602; phage(gi209447152)          2.10e-76            ShigellaboydiiCDC308394MIPLPSGTKIWLVAGITDMRNGFNGLAAKVQTTLKDDPMSGHVFIFRGRNGSQVKLLWSTGDGLCLLTKRLERGRFAWPSARDGKVFLTPAQLAMLLEGIDWRQPKRLLTSLTML
complement(2403427..2403822)       PufY' protein; SbBS512_E2603                                                         N/A                 ShigellaboydiiCDC308394MSGEKKAKGWRFYGLVGFGAIVLLSAGVWALQYAGSGPEKTLSPLVVHNNLQIDLNEPDLFLDSDSLSQLPKDLLTIPFLHDVLSEDFVFYYQNHADRLGIEGSIRRIVYEHDLTLKDKLFSSLLDQPEVA
complement(2404729..2405031)       PROPHAGE_Shewan_MR-1: ISSod1, transposase OrfA; SbBS512_E2605; phage(gi24373865)     7.18e-11            ShigellaboydiiCDC308394MKKRNFSAEFKRESAQLVVDQKYTVADAAKAMDVGLSTMTRWVKQLRDERQGKTPKASPITPEQIEIRKLRKKLQRIEMENEILKKATALLMSDSLNSSR
complement(2405223..2407850)       PHAGE_Bacill_AR9_NC_031039: ssDNA binding protein; SbBS512_E2606; phage(gi100044)     1.50e-123           ShigellaboydiiCDC308394MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWNKAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAMRYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMATNIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKVYIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDGMRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRREVVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNVAAMLERAGDDAARPEWLEPEFGVRDGLYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKELLDQIAELLRILGSADRLMEVIREELELVREQFGDKRRTEITANSADINLEDLITQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYPTKSRATKGVISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTAEDENVVGLQRVAEPVDEEDLDTIDGSAAEGDDEIAPEVDVDDEPEEE

#### region 14 ####
complement(2411898..2412401)       PHAGE_Shigel_SfIV_NC_022749: IS1 transposase B; SbBS512_E2611; phage(gi557307573)     1.06e-111           ShigellaboydiiCDC308394MSRQCTHYGRWPQHDFTSLKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTLATLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGYYLNIKHYQ
2412476..2412667                   conserved hypothetical protein; SbBS512_E2612                                        N/A                 ShigellaboydiiCDC308394MPCFTAMRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYPCVER
complement(2412688..2413593)       PROPHAGE_Escher_MG1655: IS2 transposase TnpB; SbBS512_E2613; phage(gi16132094)       0.0                 ShigellaboydiiCDC308394MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLEI
2414706..2416991                   PHAGE_Colwel_9A_NC_018088: ribonucleotide-diphosphate reductase subunit alpha; SbBS512_E2614; phage(gi392973311)     0.0                 ShigellaboydiiCDC308394MNQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDAIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCESGACKI
2417138..2418268                   PHAGE_Pseudo_OBP_NC_016571: putative NrdB; SbBS512_E2615; phage(gi371671580)         0.0                 ShigellaboydiiCDC308394MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLSNFQL
2418268..2418522                   PHAGE_Cyanop_S_RIM50_NC_031242: baseplate wedge subunit and tail pin; SbBS512_E2616; phage(gi100204)     9.47e-06            ShigellaboydiiCDC308394MARVTLRITGTQLLCQDEHPSLLAALESHNVAVEYQCREGYCGSCRTRLVAGQVDWIAEPLAFIQPGEILPCCCRAKGDIEIEM
complement(2419326..2420864)       PHAGE_Stx2_c_1717_NC_011357: transposase; SbBS512_E2618; phage(gi209447153)          0.0                 ShigellaboydiiCDC308394MSSSLPDDINALKRLLAEQEALNRALLEKLNEREREIDHLQAQLDKLRRMNFGSRSEKVSRRIAQMEADLKALQKESDTLTGRVDDPAVQRPLRQTRTRKPFPESLPRDEKRLLPAASCCPECGGSLSYLGEDAAEQLELMRSVFRVIRTVREKHACTQCDAIVQAPAPSRPIERGIAGPGLLARVLISKYAEHTPLYRQSEMYGRQGVELSRSLLSGWVDACCRLLSPLEEALQDYVLTDGKLHADDTPVPVLLPGNKKTKTGRLWTYVRDDRNAGSTLAPAVWFAYSPDRKGIHPQTHLAGFSGVLQADAYAGFNELYRDGRITEAACWAHARRKIHDVHVRTPSALTEEALKRIGELYAIEAEIRGMTAEQRLAERQLKTKPLLKSLESWLREKMKTLSRHSELAKAFAYALNQWPALTYYADDGWAEADNNIAENALRMVSLGRKNYLFFGSDHGGERGALLYSLIGTCKLNGVEPESYLRYVLDVIADWPINRVGELLPWRVALPTE
complement(2420913..2421260)       PHAGE_Stx2_c_1717_NC_011357: transposase; SbBS512_E2619; phage(gi209447152)          2.10e-76            ShigellaboydiiCDC308394MIPLPSGTKIWLVAGITDMRNGFNGLAAKVQTTLKDDPMSGHVFIFRGRNGSQVKLLWSTGDGLCLLTKRLERGRFAWPSARDGKVFLTPAQLAMLLEGIDWRQPKRLLTSLTML
2421890..2422096                   conserved domain protein; SbBS512_E2620                                              N/A                 ShigellaboydiiCDC308394MNFIRQGLGIALQPELTLKSIAGELCSVPLEPTFYRQISLLAKEKPVEGSPLFLLQMCMEQLVAIGKI
complement(2422138..2423214)       PHAGE_Staphy_MCE_2014_NC_025416: glycerophosphoryl diester phosphodiesterase; SbBS512_E2621; phage(gi725948760)     5.45e-11            ShigellaboydiiCDC308394MKLTLKNLSMAIMMSTIVMGSSAMAADSNEKIVIAHRGASGYLPEHTLPAKAMAYAQGADYLEQDLVMTKDDHLVVLHDHYLDRVTDVADRFPDRARKDGRYYAIDFTLDEIKSLKFTEGFDIENGKKVQTYPGRFPMGKSDFRVHTFEEEIEFVQGLNHSTGKNIGIYPEIKAPWFHHQEGKDIAAKTLEVLKKYGYTGKDDKVYLQCFDADELKRIKNELEPKMGMELNLVQLIAYTDWNETQQKQPDGSWVNYNYDWMFKPGAMKQVAEYADGIGPDYHMLIEETSQPGNIKLTGMVQDAQQNKLVVHPYTVRSDKLPEYTPDVNQLYDALYNKAGVNGLFTDFPDKAVKFLNKE

#### region 15 ####
complement(2986679..2987743)       PHAGE_Bacill_G_NC_023719: gp243; SbBS512_E3201; phage(gi593777699)                   7.85e-08            ShigellaboydiiCDC308394MADQNNPWDTTPAADSAVQSADAWGTPATAPTDGGGADWLTSTPAPNVEHFNILDPFHKTLIPLDSWVTEGIDWVVTHFRPVFQGVRVPVDYILNGFQQLLLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFCIVIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIGNVPGVVVTIIFALPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALSMVVIASMIAVGGLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRLTQAVGRDSRSRGNRRWYTTGPVGLLTRPFIK
complement(2987736..2988938)       PHAGE_Bacill_G_NC_023719: gp245; SbBS512_E3202; phage(gi593777701)                   1.08e-35            ShigellaboydiiCDC308394MAIKLEIKNLYKIFGEHPQRAFKYIEQGLSKEQILEKTGLSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHMTVLDNTAFGMELAGINAEERREKALDALRQVGLENYAHSYPDELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNNPANDYVRTFFRGVDISQVFSAKDIARRTPNGLIRKTPGFGPRSALKLLQDEDREYGYVIERGNKFVGAVSIDSLKTALTQQQGLDAALIDAPLAVDAQTPLSELLSHVGQAPCAVPVVDEDQQYVGIISKGMLLRALDREGVNNG
complement(2989293..2990252)       PHAGE_Mycoba_Bongo_NC_041970: baseplate wedge subunit; SbBS512_E3203; phage(gi100108)     4.65e-172           ShigellaboydiiCDC308394MKLSRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQRKAQIIQQHYRGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETSWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYVMGKAVETEDEDWNF
complement(2990262..2992406)       PHAGE_Entero_phiEF24C_NC_009904: putative ribonucleotide reductase; SbBS512_E3204; phage(gi158079505)     0.0                 ShigellaboydiiCDC308394MATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFMATHVRPNSVTFSSQQQRLNWLVNEGYYDESVLNRYSRDFVITLFAHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDATLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADIAISEHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPVAGRINMSNLCSEILQVNCASEYDENLDYARTGHDISCNLGSLNIAHTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFARSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIEGCVSCAL
complement(2992379..2992789)       PHAGE_Bacill_Mgbh1_NC_041879: ribonucleotide reductase A subunit; SbBS512_E3205; phage(gi100062)     2.60e-23            ShigellaboydiiCDC308394MSQLVYFSSSSENTQRFIERLGLPAVRIPLNERERIQVDEPYILIVPSYGGGGTAGAVPRQVIRFLNDEHNRALLRGVIASGNRNFGEAYGRAGDVIARKCGVPWLYRFELMGTQSDIENVRKGVTEFWQRQPQNA
complement(2992786..2993031)       PHAGE_Mycoba_Adler_NC_023591: glutaredoxin-like protein NrdH; SbBS512_E3206; phage(gi589892251)     3.37e-16            ShigellaboydiiCDC308394MRITIYTRNDCVQCHATKRAMENRGFDFEMINVDRVPEAAEALRAQGFRQLPVVIAGDLSWSGFRPDMINRLHPAPYAASA
complement(2993279..2993608)       conserved hypothetical protein; SbBS512_E3207                                        N/A                 ShigellaboydiiCDC308394MFNRPNRNDVDDGVQDIQNDVNQLADSLESVLKSWGSDAKGEAEAARSKAQALLKETRARMHGRTRVQQAARDAVGCADSFVRERPWCSVGTAAAVGIFIGALLSMRKS
complement(2993682..2993912)       putative IS1 encoded protein; SbBS512_E3208                                          N/A                 ShigellaboydiiCDC308394MPCFTAMRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYPAGLPYLIAHSQRFQKSP
2993987..2994490                   PHAGE_Shigel_SfIV_NC_022749: IS1 transposase B; SbBS512_E3209; phage(gi557307573)     1.40e-110           ShigellaboydiiCDC308394MSRQCTHYGRWPQHGFTSLKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTLTTLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHYLNIKHYQ

#### region 16 ####
4398850..4399854                   PROPHAGE_Escher_Sakai: FtsH protease regulator HflC; SbBS512_E4706; phage(gi15834405)     0.0                 ShigellaboydiiCDC308394MRKSVIAIIIIVLVVLYMSVFVVKEGERGITLRFGKVLRDDDNKPLVYEPGLHFKIPFIETVKMLDARIQTMDNQADRFVTKEKKDLIVDSYIKWRISDFSRYYLATGGGDISQAEVLLKRKFSDRLRSEIGRLDVKDIVTDSRGRLTLEVRDALNSGSAGTEDEVTTPAADNAIAEAAERVTAETKGKVPVINPNSMAALGIEVVDVRIKQINLPTEVSEAIYNRMRAEREAVARRHRSQGQEEAEKLRATADYEVTRTLAEAERQGRIMRGEGDAEAAKLFADAFSKDPDFYAFIRSLRAYENSFSGNQDVMVMSPDSDFFRYMKTPTSATR
4399936..4400133                   conserved hypothetical protein; SbBS512_E4707                                        N/A                 ShigellaboydiiCDC308394MNSTIWLALALVLVLEGLGPMLYPKAWKKMISAMTNLPDNILRRFGGGLVVAGVVVYYMLRKTIG
4400237..4401535                   PHAGE_Mycoba_Sebata_NC_041993: hinge connector of long tail fiber proximal connector; SbBS512_E4708; phage(gi100264)     1.18e-23            ShigellaboydiiCDC308394MGNNVVVLGTQWGDEGKGKIVDLLTERAKYVVRYQGGHNAGHTLVINGEKTVLHLIPSGILRENVTSIIGNGVVLSPAALMKEMKELEDRGIPVRERLLLSEACPLILDYHVALDNAREKARGAKAIGTTGRGIGPAYEDKVARRGLRVGDLFDKETFAEKLKEVMEYHNFQLVNYYKAEAVDYQKVLDDTMAVADILTSMVVDVSDLLDQARQRGDFVMFEGAQGTLLDIDHGTYPYVTSSNTTAGGVATGSGLGPRYVDYVLGILKAYSTRVGAGPFPTELFDETGEFLCKQGNEFGATTGRRRRTGWLDTVAVRRAVQLNSLSGFCLTKLDVLDGLKEVKLCVAYRMPDGREVTTTPLAADDWKGVEPIYETMPGWSESTFGVKDRSGLPQAALNYIKRIEELTGVPIDIISTGPDRTETMILRDPFDA
4401740..4402165                   transcriptional repressor NsrR; SbBS512_E4709                                        N/A                 ShigellaboydiiCDC308394MQLTNFTDYGLRALIYMASLPEGRMTSISEVTDVYGVSRNHMVKIINQLSRAGYVTAVRGKNGGIRLGKPASAIRIGDVVRELEPLSLVNCSSEFCHITPACRLKQALSKAVQSFLTELDNYTLADLVEENQPLYKLLLVE
4402204..4404645                   PHAGE_Lactoc_Q54_NC_008364: putative ribonuclease; SbBS512_E4710; phage(gi115304286)     9.54e-79            ShigellaboydiiCDC308394MSQDPFQEREAEKYANPIPSREFILEHLTKREKPASRDELAVELHIEGEEQLEGLRRRLRAMERDGQLVFTRRQCYALPERLDLVKGTVIGHRDGYGFLRVEGRKDDLYLSSEQMKTCIHGDQVLAQPLGADRKGRREARIVRVLVPKTSQIVGRYFTEAGVGFVVPDDSRLSFDILIPPDQIMGARMGFVVVVELTQRPTRRTKAVGKIVEVLGDNMGTGMAVDIALRTHEIPYIWPQAVEQQVAGLKEEVPEEAKAGRVDLRDLPLVTIDGEDARDFDDAVYCEKKRGGGWRLWVAIADVSYYVRPPTPLDREARNRGTSVYFPSQVIPMLPEVLSNGLCSLNPQVDRLCMVCEMTVSSKGRLTGYKFYEAVMSSHARLTYTKVWHILQGDQDLREQYAPLVKHLEELHNLYKVLDKAREERGGISFESEEAKFIFNAECRIERIEQTQRNDAHKLIEECMILANISAARFVEKAKEPALFRIHDKPSTEAITSFRSVLAELGLELPGGNKPEPRDYAELLESVAERPDAEMLQTMLLRSMKQAIYDPENRGHFGLALQSYAHFTSPIRRYPDLTLHRAIKYLLAKEQGHQGNTTETGGYHYSMEEMLQLGQHCSMAERRADEATRDVADWLKCDFMLDQVGNVFKGVISSVTGFGFFVRLDDLFIDGLVHVSSLDNDYYRFDQVGQRLMGESSGQTYRLGDRVEVRVEAVNMDERKIDFSLISSERAPRNVGKTAREKAKKGDAGKKGGKRRLVGKKVNFEPDSAFRGEKKTKPKAAKKDARKAKKPSAKTQKIAAATKAKRAAKKKVAE
4404826..4405557                   RNA methyltransferase, TrmH family, group 3; SbBS512_E4711                           N/A                 ShigellaboydiiCDC308394MSEMIYGIHAVQALQERAPERFQEVFILKGREDKRLLPLIHALEAQGVVIQLANRQYLDEKSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLVRTMRMLQEENIWIVGTAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQRS
4406097..4406474                   PHAGE_Shigel_SfIV_NC_022749: IS1 transposase B; SbBS512_E4713; phage(gi557307573)     6.75e-86            ShigellaboydiiCDC308394MDEQWGYVGAKSRQRWLFYAYDRLRKTVVAHVFGERTMATLGRLMSLLSLFDVVIWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHYLNIKHYQ
4406582..4406980                   putative inner membrane protein; SbBS512_E4714                                       N/A                 ShigellaboydiiCDC308394MHILDSLLAFSAYFFIGVAMVIIFLFIYSKITPHNEWQLIKNNNTAVSLAFSGTLLGYVIPLSSAAINAVSIPDYFAWGGIALVIQLLVFAGVRLYMPALSEKIINHNTAAGMFMGTAALAGGIFNAACMTW
4406990..4407628                   PHAGE_Citrob_Moon_NC_027331: putative lipoprotein; SbBS512_E4715; phage(gi849248649)     2.11e-10            ShigellaboydiiCDC308394MARKRKSRNNSKIGHGAISRIGRPNNPFEPRRNRYAQKYLTLALMGGAAFFVLKGCGDSGDVDNDGDGTFYSTVQDCIDDGNNADICARGWNNAKAAFYADVPKNMTQQNCQSKYENCYYDNVEQSWIPVVSGFLLSRVIRKDRDEPFVYNSGGSSFASRPVWRNTSGDYSWRSGSGKKESYSSGGFTTKKASTVSRGGYGRSSSARGHWGG
4407631..4408689                   PHAGE_Ralsto_RSL1_NC_010811: glutathionylspermidine synthase; SbBS512_E4716; phage(gi189426829)     1.61e-76            ShigellaboydiiCDC308394MLRHNVPVRRDLDQIAANNGFDFHIIDNEIYWDESRAYRFTLRQIEEQIEKPTAELHQMCLEVVDRAVKDEEILTQLAIPPLYWDVIAESWRARDPSLYGRMDFAWCGNAPVKLLEYNAIQERLISRFSELYSREPFYFCCCQDTDEDRSTVLYLQDCAQQAGQESRFIYIEDLGLGVGGVLTDLDDNVIQRAFKLYPLEWMMRDDNGPLLRKRREQWVAPLWKSILSNKGLMPLLWRFFPGHPNLLASWFEGEKPQIAAGESYVRKPIYSREGGNVTIFDGQNNVVDHADGDYADEPMIYQAFQPLPRFGDSYTLIGSWIVDDEACGMGIREDNTLITKDTSRFVPHYIAG
