gi|300437532|ref|CP001084.1|  Lactobacillus casei str. Zhang, complete genome. 2861848, gc%: 46.51%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
980249..980261                     attL                                                                                 N/A                 TGGAGGTGAGGAG
complement(980331..981479)         PHAGE_Lactob_Lj928_NC_005354: putative integrase; LCAZH_0995; phage(gi41179288)      5.98e-35            LactobacilluscaseistrZhangMAIKKVELKSGAVRYRVTVNAGLVAGKRKNIVRNVQSMQKARLLESKLKLDVANGLYDENDTTPPVHTFSDLYNQWWPIYVQTVEGSTAYKTKQLFNNHLIPMFGSKTLTAIKTGSIQSAVSQWRETTTKAYKERFIYLKKILSFAVKMQYIEKNPADGVELPRGVRSGKSPVYWDNKQVARFLTCIDPNNDPEKYTMFLLMVSTGIRREELCALNVSDVNFKTSTLSINKAYATGLNGKESIKGTKSTAGMRTIPLTPKVTIQLKKWIALLDASKIISIRDDRPLFPSPQHFEKRLGINRPNKWLKDIIEANHLTPRITLHGLRKSFVTNMIRSGVDVSTVQRLAGHSTPDVTLRIYAGMNQSDAREGIDKLAEYMEQVTF
complement(981469..981585)         hypothetical protein; LCAZH_0996                                                     N/A                 LactobacilluscaseistrZhangMIIIMAEKSAATFSPFPAKTLQSNTACPAWRIGEEYGN
complement(981643..982206)         PHAGE_Lactob_phiAQ113_NC_019782: putative transcriptional regulator; LCAZH_0997; phage(gi446730276)     2.82e-12            LactobacilluscaseistrZhangMKNRIKAFRYEKGWTLSQLAKKAGMPITTLSNYERGTRTPSAEVLKKLADIFETNTAYLMGLTDAPAETLTNSNLKNIKFEVRSEAFQRLANIVLSIGSEYGGNIDEDSENIVSHILRFYISSSRSEHLHENIEELQIVLSLLVQLVDSDSRQKPLGVDDFVKIQNAINNQISRLYLNNHGQYTISD
982351..982626                     hypothetical protein; LCAZH_0998                                                     N/A                 LactobacilluscaseistrZhangMQLQISTTSEFENKLRSLVRQTVAEMMPQQQTNQPQIPEFLNLGEACKLLSVSRGTLDKLIKRGEIKVTHVNTAKRISKKQLIEFMASREV
982696..982917                     hypothetical protein; LCAZH_0999                                                     N/A                 LactobacilluscaseistrZhangMKLFSKEEMALDRELGDLMDDVSLNILAITEDSSVTVGGKHVPNSELAITAAKELLRVSEILKLYENEDDADD
982910..983044                     hypothetical protein; LCAZH_1000                                                     N/A                 LactobacilluscaseistrZhangMISIITWLLSHPLTVPALCMAFLIGAVCGAYFQFSEDDRHAKNG
983028..983219                     hypothetical protein; LCAZH_1001                                                     N/A                 LactobacilluscaseistrZhangMPKMVSTKYGWQWRDYVQADADCDRYWQAQKAEKRSLIEATKKSPRVAPQGEKKTSEKLYINF
983264..983539                     hypothetical protein; LCAZH_1002                                                     N/A                 LactobacilluscaseistrZhangMMKNVSNSTKAPDLGEASWNLSTAKGLLEALSDEFDIMEGSVVSYQSNRNEKNAAILAYGTDRSFYTWMALLKAIQEYVDSSLATIDEVNK
983536..983724                     hypothetical protein; LCAZH_1003                                                     N/A                 LactobacilluscaseistrZhangMMKEDYYTTAQALLSDTSAMVNILRHQINNEQQSALADTVADMIIDARRLLMEGDAVDGRRA
983699..984535                     PHAGE_Lactoc_bIL310_NC_002669: hypothetical protein; LCAZH_1004; phage(gi13095885)     5.80e-25            LactobacilluscaseistrZhangMLSMVDVLKVALGYQQHGFAVYPLAPATRTPINGSHGYKDATKDPEQAKKWWGEHPNYNIGLGLDGVLVFDIDMGHKSEANGNESLAKLSAEGRADQIPSTYIETTPNGGLHIFFTYPKELQLTSRSDLFSKNGEKTGLDYIATGVPVFPSIRENGMYQPLKGHKITKLAPVPQWLLDEIQRVSHPNPQLGGSTVYRGKRWTGKLLDEIVNGTSTGNRNDFLTMIAGKMFFTGAEPQTVYNLLFTTNDNYLDTPLSEAEVNKIFKSVLKAEERRRAVG
984528..985952                     PHAGE_Staphy_2638A_NC_007051: ORF003; LCAZH_1005; phage(gi66395453)                  5.29e-73            LactobacilluscaseistrZhangMVKAMPEDIKQEAKKVVNVDFTGQEQWRNDLKLDGNGGIRKDSVVNIQLLLDNDQAFANVVAWDDFSEMLIKTKGVKGLPIRKGFWTDEDDAVVRSYMERKHNLLFSKQNEQDAMVVVGKEHSINPVKDWIETEKWDGTPRAERYFIDYLGAEDNEYTRAVTRKWLAGAVKRVYQPGCKFELVPILEGKQGLGKSTAARNLFPTKFSDSLKSMGKTDEDYKKLQGNWIMELGELSAMKKTEIESAKSFISAQSDSYRGSYSHYVYPHLRKCVFIGSTNQQDYLKDATGERRFFPIRCGVTKPTKVVWRNEESVPKINHDVHQVLAEVKTWVDAGESVFADDKLMQLAKPYQQEAETVDPMKEAIEDFLNMKVPSNWEKLSLSLKASFFHTHIDHNGDVATWLQQHLDAGELQPMQQTTTREIMEVVFDKSVDRYLMGRTNSDAKRIKLIMDNMPGWQAQRIRIAGGQPRGYVRQ
986225..986566                     hypothetical protein; LCAZH_1006                                                     N/A                 LactobacilluscaseistrZhangMTKTAYRKAALVDVKHDRDKWAELGALVKERYLVRSMTPKDWFIIVKQREGYEIEVYPTFEMSDGFQFSHVNLLTRSSYGSISHIAYHELCSSASDTISSIDRMIDLVKDKRY
986649..987023                     PHAGE_Staphy_phiPV83_NC_002486: phi PVL ORF 63 homologue; LCAZH_1007; phage(gi9635713)     7.15e-17            LactobacilluscaseistrZhangMIPFNQRFCEEHKQDKSKQATNQERMQYEEKELRFYKSTTWTKLSKSFRLRNPTCASCLKRGIIRQAVLVDHIEPIKTAYGWQHRLDESNLQSLCQTCHNAKTAREVAQRRMRSPKRSTPARKF
987148..987618                     PHAGE_Staphy_phiPV83_NC_002486: phi PVL ORF 1 homologue; LCAZH_1008; phage(gi9635714)     1.48e-21            LactobacilluscaseistrZhangMGAPLKSVTNLSAHLSKKQLADRVASEKALFTYKELQVQPPTWLDDYAVTEWHRIVPLLKKDIPVSELDAALIASHCQAYSDIQKAAELIQEQGMMVETTDSVKANPAVKMKLDATNQMMRIDEVLGLSVYSRAKLALKSETKKKPDDPFAELVSS
987615..989318                     PHAGE_Lactob_PL_1_NC_022757: terminase large subunit; LCAZH_1009; phage(gi557307995)     1.49e-134           LactobacilluscaseistrZhangMNYATEYTDKVLSGEIVAGKKIKQAARRYRRDLRASKRKKNPWPYYFDEDFANKAIEFIELMPARDGSPLKLELFQKWLISELFGWRDKETGNRRYDRAYISMARKNGKSFLMADLGALYLLRENKPAMNREIVYTANSNAQAHLAFDMLSSGLRQVSKMSKSVRDRLKINRNEIIDLPSNSRAVPLASDLHSLDGYQSDLAIIDEFALARSDEILRTLKTGQINSDNSLLAVISTTGPDLNGPMYKEYKFVSKVLTGREQADRYFIAIFEQDSKDDAFAPETWEKSNPLLANAERAKTMRPSLQADVDLAAKQGTLRPILVKNFNMWQSARADSYISLDDWEKATIEPPDTRDKDVYIGLDLSKSSDLTSISWLVPEDGYLYADSHSFVGTKYGLEEKIKRDGFDYISGASRGECSITKLDSGMIDYDEVLRFILDLIERNQWNVRAICYDPFAMGYLIPEFEKRDLPLLEVRQGVRTLSIPTTRFRDDLFNGQLKHPDNQLLAYAVNNAILKYDANNNPIIDKARNATKIDPVAALMNAYTIAMDQSKESEVADNDFYSSDDFSF
989284..989463                     hypothetical protein; LCAZH_1010                                                     N/A                 LactobacilluscaseistrZhangMTFIRAMTLVFNVQTVLLLLGLICMVVGIWWLFGFGVGMIAVGTALISVAVIINFNKGR
989468..990652                     PHAGE_Lactob_PL_1_NC_022757: portal protein; LCAZH_1011; phage(gi557307997)          7.74e-63            LactobacilluscaseistrZhangMSFFTNDTTQPRDDNSDPFLDALVSMTSNDSGLYVGIGALRNSDVFTAVRVIASDLATNPIEYSDNRISVLLNKAPNGHMTAWAFKFAIAANMLLNGNSFARVTKNPSGQVTGFELVPNSQMVVKQDDTTGIISYEYTPDNGRSQRLNASEVLHFKCFTQDGYKGISPLYSLHDEVGVQKSGHALLKGFFNSGVQGTGILKVNKTQLDTKAKENIRNKFEAANSGDNALKTIILDNDMDYKQLEVNTDVLNLVNSSDWTTKQISKAFGLPLDRLGIESEHSNAVQSNVMYLQNTLIQYFTCFTSEMDAKLSTGDNRFSFNTDKLFSADPATMQELAVKGLQGGVLTTNEARAKLNLPPITGGDDIMASLNYTPLNNLTNYQNTRQRSDPENESR
990639..992192                     PHAGE_Entero_IME_EFm1_NC_024356: capsid protein; LCAZH_1012; phage(gi658310465)      7.67e-47            LactobacilluscaseistrZhangMNQDDVEKRLNPDADLAAADATKTDDDQDKAKTGSKKLSGYAVVFNSPSKDLGGFKEVVDPHAFDNVDLSDVYMVSNHDFSQVLASTKAGTLTLNVDDKGLQFEATLPDTTTANDAYNNVQAGNLSAMSFTFNAAPDGDTFTKDDSGQVIRTIKQVKSLFDVSLVAIPAYDDTNVQVDKRSYTEWLKDHVEDPEQQLPPTEKRKGVNHMTEKTIIDKEEHTESRAYEDYIRSMGEQRDGLTTTTAGAVVPKEVINDVWDLKQSDYDLAKYVTVKQVGTPVGTYPIALTNNGVLATKAELADVADVDANMFKGVDYKVATRAGKIYLSNELVEDSEVDIVAEVKNQLKKLVQNTDNSNIISVLTGKTGTNDNFKHITGTGLDDLKQTFNVELDPALSLSVIVNQDAFNYLDTLKDSEGRYLLQPSITAPSGKQLFGAPVIVIANEVLPTDKAGTYRIIIGDFAQAIFLAQKNEVNTQWERFDSYSQGLAVVIRNDYEVVDPDAARIVDITPVAATPAA
992248..992538                     PHAGE_Entero_EFAP_1_NC_012419: head-tail joining protein; LCAZH_1013; phage(gi225626391)     2.08e-11            LactobacilluscaseistrZhangMSVTTEDLKKALRISHSEDDAMLSAYLLTAKQFVISAVDQTLTDENFGDDPRFDFAVSLLAQHWYINRGVDGATYVPDSVVSMIQQLRGVDYATGK
992522..992863                     PHAGE_Lactob_PL_1_NC_022757: head tail joining protein; LCAZH_1014; phage(gi557308001)     2.08e-17            LactobacilluscaseistrZhangMPLVNSISQLNELITLVSYTMGNVNGVPVSNVRKEHFTTWALVLSQYLSEVRASVGTKLEDTVTFVVRYDQPETILNSWRIEWQGKQYDIVKLTPDTAKKQWTTIIGKPVANK
994029..994041                     attR                                                                                 N/A                 TGGAGGTGAGGAG
