gi|00000000|ref|CP001085.1|  Candidatus Riesia pediculicola USDA, complete genome. 574390, gc%: 28.48%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(557233..558993)         PHAGE_Helico_phiHP33_NC_016568: DNA primase; RIEPE_0579; phage(gi371671350)          1.97e-39            MLKNKKISNEFVKELIEITDIVELIQNDINLQEKGKNYVALCPFHKEKTPSFTVNKEKRFYYCFGCSSHGNSIDFLMNYKGVGFVEAIKELSEMNGLEIVYEELNNFSKRENFKRIFYGILHEINKTFIDSWKYSFSYSAKRYLQRRGLDQNTIQHFSIGFGSIFDDKIKKKIIQMKNYSHHLKEIGIIKINEKGRILNKFHNRITFPIRNRRGMIVAFGGRTILNDHIQPKYINSPESVIFKKGKILYGMYEVIKEQNHPSKLLVVEGYMDVISLKQFQINYAVAILGTSLTENHVKTIFKFTNSVVFCFDGDQAGYSAAWRTLKIIISYMEDDRQARFMFLPNGYDPDKIIREEGKEKFEKRIEKSHLLSYFLFNRFKKKIDLSNNEGKARFSTLVSPIIYKIPGYVFKKCMFNELSHIIGVSIQDRSIKKPLKSTIQKKSPKIKKLGNQSRTISILIKLLIKNPNFVRYFPNFNISKYENIKLFGIKLFLKIFNICRNYPEIDSNQLEKRFNNDVLFRKLKEDSENHNFFLEKKIERRIFQDAMFHLTSIAVNERFNFLISKERKIGLNIKEKEEVLRITSRK
complement(559027..559272)         ribosomal protein S21; RIEPE_0580                                                    N/A                 MPIIKVKENEPFDLAFRRFKRSCEKAGVLAEVRRREFYEKPTTVRKREKASSIKRHAKKIARENSRRFRTFLNPNLLKKKR
559472..560503                     PROPHAGE_Escher_MG1655: glycation-binding protein, predicted protease/chaperone; essential for genome maintenance; RIEPE_0581; phage(gi16130960)     7.04e-121           MMVLGIETSCDDTGVAIYDDELGLLFNKVESQHELHSRYGGVLPELASRAHSIKLPKLIKLAISQKNLLTNNKVDAIAYTAGPGLVGSLLVGSIFGKSLAFSLKIPVIPVHHIEGHIFSVMLCQKEIPDFPFLVLLISGGNTQIISVQSVGKYRLLGRSRDDSVGEVFDKVARHLGLKYPGGYLISSIANKGNPGKFRFPRPMIHSDDLDLSFSGLKTSVLNVIQERKLDFQTICDIAYEFEKSVVDTLIEKCRAALNREKVDNLVVVGGVGSNFSIRSKIKSFFGNVGKKVFFPKYEFCTDNGAMIAYAGTLRLKYQISSSPTFLKKVIDPKLSISKYSEEI
560558..560911                     dihydroneopterin aldolase; RIEPE_0582                                                N/A                 MKVLIIDQLSIFTRIGVYDWEKQIKQKLLISIKISRKKYDIENEKFENYLDYSKISETIVNYLERNSFSLIEEVADKISRILFNQFFCNWVKVTVFKPNAIARAKTVGVCLERKIDI
complement(560913..562166)         PHAGE_Sinorh_phiN3_NC_028945: tRNA nucleotidyltransferase; RIEPE_0583; phage(gi971759164)     1.34e-77            MKIYLVGGAVRDQILGMPISDRDWLVVGSSPQEMIRLGFQQVGRDFPVFLHPVTKEEYSLARIDRKIGSGHTGFQCFSSPSVTIEEDLYRRDLTINAIAKTTKNKIIDPFFGIKDIQKRIIRHVSNAFSEDPIRVLRTARFYAKLSEYYFTIYHKTWKIIEEMVQQEDLKTVSKERVWIETKKALSTSSPDLYFKMLFQCGALSVLFPEIQIILTKSFKKKSSLTSFIDQKEYIFLVIKKSALLTKSIEVRFAALCSNFTVFFYDNHMSNSKEKKINSAVQMVRSFCDRMCVPTKTKKLSVAIAKVHQNVQNIQNSCSKEVIKIFDQMDVWRKPKNIDQLITVCKAHYIVKNRLELGCYYPQGELLMKIFKKVSKSSLKIDFQKMKNKEIRGTILKNRLKIIEKVMNLKKIRKNHLR
complement(562441..562554)         hypothetical protein; RIEPE_0584                                                     N/A                 MKYRTFQKNVLLIERQTYLKKIINFLKNINSYYYLYW
562662..564074                     PHAGE_Prochl_P_SSM2_NC_006883: putative carbohydrate kinase; RIEPE_0585; phage(gi61806181)     1.07e-17            MKFSIPNFEKNRILVIGDIILDNYWYGITEKISKEAPIPTVNIKSRLSKLGGAANVAVNASRLGARVFLIGLVGNDESSEIVRSELVRLKILFDLIVLPNYLTVTKFRIFSKNQQIARMDFEEKIKEKCSEYVSYILEKVKKRISFAQVIVLSDYGKGALYETSKIIDLARNYKIPVLVDPYGKNFEKYKESTMLTPNLDEFELVVGKCSNNSEMEKKGFEMIRSLSLESILITLSEKGILLLSNKEHKLYLPSFVRNVKNVTGAGDTMIATLAVAFSSSELSLDQSCFLSNIAASIVVEKENTSDVSIEELKRRFYERSCRFFGILREDQIKNTVNICKFLKEKIVMVVGYLDEIHLTYVRYLNRARNFGDRLIVAINIDTSIERLKLKNTFYSTENTMEILLQLKSVDWIIPFKEKSPENIVRKIKPDVFISTKICSSWIENIFRYVGEVKILNFKDNRFYDENVKIV
564244..564729                     PHAGE_Pseudo_YMC11/02/R656_NC_028657: single-stranded DNA-binding protein; RIEPE_0586; phage(gi966197819)     2.89e-64            MASRGINKVILIGYLGQDPEIRYMPNGNAVANLSLATSENWKDKQTGEMRERTEWHRVVIFGKLAEVSGEHLRKGSQVYIEGSLQTRKWQDQNGQDRYNTEVIVNIGGTMRMLGTKNHQDLSQRDKPSIWEKQKTSEKIVDSSSNEEGKEESIEFDDDIPF
564833..564904                     tRNA                                                                                 N/A                 TCCTCCATAGTTCAGATGGTAGAACGGCGGACTGTTAATCCGTATGCACTGGTTCGAATCCAGTTGGAGGAG
complement(564970..565455)         PHAGE_Pseudo_YMC11/02/R656_NC_028657: single-stranded DNA-binding protein; RIEPE_0588; phage(gi966197819)     2.89e-64            MASRGINKVILIGYLGQDPEIRYMPNGNAVANLSLATSENWKDKQTGEMRERTEWHRVVIFGKLAEVSGEHLRKGSQVYIEGSLQTRKWQDQNGQDRYNTEVIVNIGGTMRMLGTKNHQDLSQRDKPSIWEKQKTSEKIVDSSSNEEGKEESIEFDDDIPF
complement(565625..567037)         PHAGE_Prochl_P_SSM2_NC_006883: putative carbohydrate kinase; RIEPE_0589; phage(gi61806181)     1.07e-17            MKFSIPNFEKNRILVIGDIILDNYWYGITEKISKEAPIPTVNIKSRLSKLGGAANVAVNASRLGARVFLIGLVGNDESSEIVRSELVRLKILFDLIVLPNYLTVTKFRIFSKNQQIARMDFEEKIKEKCSEYVSYILEKVKKRISFAQVIVLSDYGKGALYETSKIIDLARNYKIPVLVDPYGKNFEKYKESTMLTPNLDEFELVVGKCSNNSEMEKKGFEMIRSLSLESILITLSEKGILLLSNKEHKLYLPSFVRNVKNVTGAGDTMIATLAVAFSSSELSLDQSCFLSNIAASIVVEKENTSDVSIEELKRRFYERSCRFFGILREDQIKNTVNICKFLKEKIVMVVGYLDEIHLTYVRYLNRARNFGDRLIVAINIDTSIERLKLKNTFYSTENTMEILLQLKSVDWIIPFKEKSPENIVRKIKPDVFISTKICSSWIENIFRYVGEVKILNFKDNRFYDENVKIV
567145..567258                     hypothetical protein; RIEPE_0590                                                     N/A                 MKYRTFQKNVLLIERQTYLKKIINFLKNINSYYYLYW
567533..568786                     PHAGE_Sinorh_phiN3_NC_028945: tRNA nucleotidyltransferase; RIEPE_0591; phage(gi971759164)     1.34e-77            MKIYLVGGAVRDQILGMPISDRDWLVVGSSPQEMIRLGFQQVGRDFPVFLHPVTKEEYSLARIDRKIGSGHTGFQCFSSPSVTIEEDLYRRDLTINAIAKTTKNKIIDPFFGIKDIQKRIIRHVSNAFSEDPIRVLRTARFYAKLSEYYFTIYHKTWKIIEEMVQQEDLKTVSKERVWIETKKALSTSSPDLYFKMLFQCGALSVLFPEIQIILTKSFKKKSSLTSFIDQKEYIFLVIKKSALLTKSIEVRFAALCSNFTVFFYDNHMSNSKEKKINSAVQMVRSFCDRMCVPTKTKKLSVAIAKVHQNVQNIQNSCSKEVIKIFDQMDVWRKPKNIDQLITVCKAHYIVKNRLELGCYYPQGELLMKIFKKVSKSSLKIDFQKMKNKEIRGTILKNRLKIIEKVMNLKKIRKNHLR
complement(568788..569141)         dihydroneopterin aldolase; RIEPE_0592                                                N/A                 MKVLIIDQLSIFTRIGVYDWEKQIKQKLLISIKISRKKYDIENEKFENYLDYSKISETIVNYLERNSFSLIEEVADKISRILFNQFFCNWVKVTVFKPNAIARAKTVGVCLERKIDI
complement(569196..570227)         PROPHAGE_Escher_MG1655: glycation-binding protein, predicted protease/chaperone; essential for genome maintenance; RIEPE_0593; phage(gi16130960)     7.04e-121           MMVLGIETSCDDTGVAIYDDELGLLFNKVESQHELHSRYGGVLPELASRAHSIKLPKLIKLAISQKNLLTNNKVDAIAYTAGPGLVGSLLVGSIFGKSLAFSLKIPVIPVHHIEGHIFSVMLCQKEIPDFPFLVLLISGGNTQIISVQSVGKYRLLGRSRDDSVGEVFDKVARHLGLKYPGGYLISSIANKGNPGKFRFPRPMIHSDDLDLSFSGLKTSVLNVIQERKLDFQTICDIAYEFEKSVVDTLIEKCRAALNREKVDNLVVVGGVGSNFSIRSKIKSFFGNVGKKVFFPKYEFCTDNGAMIAYAGTLRLKYQISSSPTFLKKVIDPKLSISKYSEEI
570427..570672                     ribosomal protein S21; RIEPE_0594                                                    N/A                 MPIIKVKENEPFDLAFRRFKRSCEKAGVLAEVRRREFYEKPTTVRKREKASSIKRHAKKIARENSRRFRTFLNPNLLKKKR
570706..572466                     PHAGE_Helico_phiHP33_NC_016568: DNA primase; RIEPE_0595; phage(gi371671350)          1.97e-39            MLKNKKISNEFVKELIEITDIVELIQNDINLQEKGKNYVALCPFHKEKTPSFTVNKEKRFYYCFGCSSHGNSIDFLMNYKGVGFVEAIKELSEMNGLEIVYEELNNFSKRENFKRIFYGILHEINKTFIDSWKYSFSYSAKRYLQRRGLDQNTIQHFSIGFGSIFDDKIKKKIIQMKNYSHHLKEIGIIKINEKGRILNKFHNRITFPIRNRRGMIVAFGGRTILNDHIQPKYINSPESVIFKKGKILYGMYEVIKEQNHPSKLLVVEGYMDVISLKQFQINYAVAILGTSLTENHVKTIFKFTNSVVFCFDGDQAGYSAAWRTLKIIISYMEDDRQARFMFLPNGYDPDKIIREEGKEKFEKRIEKSHLLSYFLFNRFKKKIDLSNNEGKARFSTLVSPIIYKIPGYVFKKCMFNELSHIIGVSIQDRSIKKPLKSTIQKKSPKIKKLGNQSRTISILIKLLIKNPNFVRYFPNFNISKYENIKLFGIKLFLKIFNICRNYPEIDSNQLEKRFNNDVLFRKLKEDSENHNFFLEKKIERRIFQDAMFHLTSIAVNERFNFLISKERKIGLNIKEKEEVLRITSRK
