gi|192282182|ref|CP001096.1|  Rhodopseudomonas palustris TIE-1, complete genome. 5744041, gc%: 64.86%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(694225..695016)         PHAGE_Escher_PA28_NC_041935: hypothetical protein; Rpal_0641; phage(gi100028)        3.20e-16            RhodopseudomonaspalustrisTIE1MSVRQDKSVPRQRREKAAEVRIGEFGIDKARYLDMRAAAISKKLPNSSDLSLQERLVFAWLVLIFEHEDNEIEKLIGRSIKQYWRYVEGQDVPLSILLRICEVTGIPESYLVLGQQPSEDKFVHKERLETVFVRLLAFQASAGSGASVREDEERTVPFANEALERAGVRPQNARLLYAAGDSMRPTIEDGDPLLADVGDTDIIDGRIYVFSIGDQVLVKRLRRLGSRLLMRADNRDLYPDEEEVPMIEPVRIIGRVKWVGRSL
695097..695396                     PHAGE_Rhizob_RR1_B_NC_021557: hypothetical protein; Rpal_0642; phage(gi514231137)     2.82e-08            RhodopseudomonaspalustrisTIE1MRRRWDRHAIKAAVHRKGLTLVGIARKAGLEESACKVALRRRNWRGEAAIAEALGLHPSALWPDRYRSSAPIYRRNRNHVRACVASPNDVEPLAGGAAR
695393..695665                     hypothetical protein; Rpal_0643                                                      N/A                 RhodopseudomonaspalustrisTIE1MTPNLSIPNRCFDIPPVRIAPMPQAERDAALVAMWQASRGLPMAAREAVLARYAPPSVLSGSTGAASEAGEARHLRQVVGSEGSSRSSRD
695730..696545                     PHAGE_Rhodov_vB_RhkS_P1_NC_031059: hypothetical protein; Rpal_0644; phage(gi100009)     4.97e-10            RhodopseudomonaspalustrisTIE1MTRQTIKIADIDTTGRLRELRPDWVAAIAEQVQAGEVLPPIEVAKKPEGGWRLLIGGHRVAGHQQAGRTEIEADIAAFSADDEAACRMREIKENLVRAELTVLDRAVALAEWKRIYEAENPLPKRGRPAAGEMIDNLSKIFAERFSEAAARALGVNERSIQRDIEIASIDEVVRRELALHPIADNQAELLALARESAARQRKIAARLLDADSGITSVADAVAAIDKTPPPERAPAWEKVSNTFSKLKAAEQYAFFDAHADAITAWMKSKKA
696550..697002                     PHAGE_Pseudo_JBD69_NC_030908: hypothetical protein; Rpal_0645; phage(gi100003)       5.96e-08            RhodopseudomonaspalustrisTIE1MAPRRRDTATIDLFRDYEPTPVVRRFEPEEIKAWSAARRLARAISAALDGFNRSDVAAEMSEQLGETISKATLDAYASPEKPHAIPAHRLAALVSATGDERLINALLGDLGLIAVPAKYEALLKRERARELKEKLEREEQAADAQWRASR
696930..696942                     attL                                                                                 N/A                 CGCCCGCGAGCTG
696999..699173                     PHAGE_Rhodov_RS1_NC_020866: integrase; Rpal_0646; phage(gi472342882)                 1.33e-142           RhodopseudomonaspalustrisTIE1MKEWCTARELAEAQLPGLPSTESALIRFAGREGWNDSLAYVRRRSGRGGGLEYNISLLPPSARVEFERRHRAILAPQPVEASTAAQPAENLSERAAKERDARLAIVAAFAAFGRGQRLGNASRSKIFVDAYNGGTLIIDAWIREIIPHLSPRSLARWVKAKREGRTNNLAVDRAKARKGKGVLDIACDGKVRTYLLALIAHNPHLSAQHLRALIRSEFGDQLVMPSGEVVEVPPVRTLQHYVAKLKDEERVALTKLSNPDRYRSTMAPSGVGTYRWVREPNTLWMIDASPVDALCVDGRHSIYAAIDIATRRTKLYVSRTPRASAVALLMRKAIIAWGVPETVKTDNGSDFVAQDTQRLFANLGIEPELSDKYSPAQKGHVERVIKTFQHDCATLLPGFVGHNVADRKRIEDRKGFAARLGEDTAETFGVSLTGAQLQAYVDQWIDLVYEQRTHSALGTSPMLAAAASKKPIKTVDPHALDLLLMPVGGIRVVTKFGIQLDRFKYVINEALPGDRVLVRQDPNDAGRIIAFDADSGAYVGDGICPELAGVDPAALLRAKKEFTAAHLAERTRDVRREIKKLTTGPALIERMLEVARRDMPNVISLPKREEKHETPAIAAALDAMVPKEAPPPSSDVLAMQAKLIADETVVPLRSEETPHQRWQRALDVIARMQAGDPVTSEEAMWLGGYRTGPEYQARALMHGDPMETEKPAASWTDATGQQSL
699185..699955                     PHAGE_Rhodov_vB_RhkS_P1_NC_031059: hypothetical protein; Rpal_0647; phage(gi100011)     3.79e-49            RhodopseudomonaspalustrisTIE1MTATNNVVKGGQVPLKNVASFMTLTMRLQNRSPHLPGFGVFFGDSGLGKTEASIYAQNKTNAVRVEIGETWSIKKFLQEVLFELRRPARGTISDLADQVKAALGDDPSRPLIVDEADKLLRKNGLLEIVREIGDVAGCPVILIGEEMLPEKLAVHERFHNRVLDWTGAEPCDQDDVEKLAKALCGGITIAPDLQAEICRRSAGRARRIVTNLDQAIVIARNKGIKTVDLAAWGGAKYFTSTPPGARLSSAAKRRSA
699957..700598                     PHAGE_Rhodov_vB_RhkS_P1_NC_031059: hypothetical protein; Rpal_0648; phage(gi100012)     4.40e-22            RhodopseudomonaspalustrisTIE1MPVPSTIITLPLSVPISTGQEAIWQIIRDLDKRGPWAVADIDSSTVKSVITTISEYVARLERGGFIEVVGTKPVPGRTLMKANLYRVKVKTSEAPRVRRDGTPAPPSAQQQMWRAMRSLQQFTYRDLARIATTDVLKIGDVTAKTYVQRLSDAGYLQLLQPAKNSGGLAIYRLNRKMNTGPLAPQILRTHFVFDPNRKVVVGDPSLADNAEAV
700598..700984                     PHAGE_Rhodov_vB_RhkS_P1_NC_031059: hypothetical protein; Rpal_0649; phage(gi100013)     2.68e-24            RhodopseudomonaspalustrisTIE1MAGVVKRDPLQVAKDAWGNDLPDWVEALANEARATSGEAAAGRIGYSGAVVSSVLANKYKGRLDIVEARVRGALMGETVGCPVLGDIARDRCLDEQKRGFSTSSSVRARIYRACRAGCSHSRIGGDRS
700981..701607                     Chromosomal replication initiator DnaA domain; Rpal_0650                             N/A                 RhodopseudomonaspalustrisTIE1MTIVAVAHRHISVRLIIYAVADSFGVTVQDMRARRRDGKVYHARAAACLLARELTGRTYPQIGRVLAGRDHTTIIHAVERAREMLASDDDFKLAYTAAKMAVETIAATKLAELLRDDEPSVVAARICEYPSQANRVSTWEIISMAARLVALEELAADAFKLLADLDLLVEQPASALELRGPLTSRITSVAESLASLGYANQPEGAPNV
701600..701845                     PHAGE_Sinorh_phiLM21_NC_029046: hypothetical protein; Rpal_0651; phage(gi981221049)     4.33e-07            RhodopseudomonaspalustrisTIE1MCDCRSEVNQHLCAHNTRLSTAFSCVENRLVGRLIVATEKIDSRGKGRPLIVTPSYCPFCGEAIDGGANKIIPLSQGEAHV
701838..702488                     PHAGE_Rhodov_vB_RhkS_P1_NC_031059: hypothetical protein; Rpal_0652; phage(gi100016)     2.72e-76            RhodopseudomonaspalustrisTIE1MSETTTPAIDDGAIEIGGKSFMHDSSGRLVPLDLIKPQHLLEDQTVRKIVGYAQSLSDQISRFRGHTFDDVTSFAELLAEQYGAKIGGKKGNVTLASYDGLFRVVVQVADQLAFGPELQVAKSLVDACITSWSDGARTEIRALVEHAFQVDKEGQINRAALFHLRRLQIDDDNWRHAMAALGDAIRVVGSKQYVRFYRRANRAARWEPITIDLAAA
703103..703315                     hypothetical protein; Rpal_0653                                                      N/A                 RhodopseudomonaspalustrisTIE1MPWADRSLPPERDDDPPPTTPAPLDALQAERLALISQVRRGVHSKRQRQLVQRISALTLAILAGNTGPRR
703312..703539                     PHAGE_Pseudo_JBD44_NC_030929: RNA polymerase sigma factor; Rpal_0654; phage(gi100049)     8.17e-17            RhodopseudomonaspalustrisTIE1MTDKPDGKAADGQALHALKRDAERYRWLRERDVETIDMGGVFVGKTPENVVLNGIDCDAAVDAARIAEQEPDAGE
703542..703742                     hypothetical protein; Rpal_0655                                                      N/A                 RhodopseudomonaspalustrisTIE1MREYGFKTSTSIDRVRNTVLISITFEDERIAEAATDLLRKRQQHGALTLDLQRTKFVEIDGSCVRQ
703739..704167                     response regulator receiver protein; Rpal_0656                                       N/A                 RhodopseudomonaspalustrisTIE1MSEVVSKAYHEATVRTLHQQIETMQDTIIDLRRKLLPQKPRFPTQWKLSPHQDRMLAALVDNAPNAVSHERMMIAACGRTGGDILPNTLTMHVSLLRRKLLSLGFGRIESHWNVGYFLRDDHAAAIKLEAARVLGSSREMAS
704164..704916                     PHAGE_Lister_LMTA_34_NC_042048: late promoter transcription; Rpal_0657; phage(gi100046)     1.50e-19            RhodopseudomonaspalustrisTIE1MKRPRGSSAVMAQRQAITAEQIEADPRADLDFFPTPPWATRALLQHVLHIDAARGRHLSCWEPCCGEGHMAEPLREVFGTVYASDVYPHGYGEVGSFVDGGGLDIGDVAQCPFRPDWIITNPPFALAIEIARRALREARQGVALLVRTAWLESEQRFAFFSEAEPFRFAPFAERLAITRYAWVPDASSATAYAWLVWSCPTWSAASGSPRFETKLIPPGCKRSLTKPSDLRLAEPGRAPTVPMEWRGASS
704913..705521                     PHAGE_Rhodov_RS1_NC_020866: hypothetical protein; Rpal_0658; phage(gi472342895)      1.87e-32            RhodopseudomonaspalustrisTIE1MKAASAAADVTAPQIAMIHVLAKQAGLDEDCRRDAIERITGKRSARELTAVEGSAVIDHLKSLSKAADIDGPYGKKLRALWISGWHLGVVHNRTDKAMLSFVERQTGIERTRWLRAAADARKAVEALKLWISREGGVQWPAGDDPIAVRRAVIEAQQLRLAAFGQSFQVQHAATDSAADLDKVIARLGARVRTAQADWATRY
705524..705700                     hypothetical protein; Rpal_0659                                                      N/A                 RhodopseudomonaspalustrisTIE1MAKSTKDELEFQLKWLRNHNEADRAFYFSQLAEKHGEGFAAAVRKEFERQQQEARHAR
705746..705979                     PHAGE_Rhodov_vB_RhkS_P1_NC_031059: DNA helicase; Rpal_0660; phage(gi100021)          1.07e-07            RhodopseudomonaspalustrisTIE1MTKLAPMRVSDHALLRFLEKAGGIDVELLRRAMSASIERATAMAEKLGVDEYAIVVDGFRYIARCGTVTTVQEEPRR
705976..706386                     PHAGE_Rhizob_RR1_B_NC_021557: hypothetical protein; Rpal_0661; phage(gi514231154)     2.42e-06            RhodopseudomonaspalustrisTIE1MSVSWLPEVLAEIAEVAGLDAALKLAESHGGTRKRFPAEMPKGRHWLSECVGAVAAAQICAYFRQGSGSGRFRGVYLLIPRGPTGTIAAARRRMAQALEEGKSAAEAARVAGMTERTAYRARARSRGRDDKQGSLF
706503..707897                     PHAGE_Sphing_Lacusarx_NC_041927: hypothetical protein; Rpal_0662; phage(gi100026)     6.53e-22            RhodopseudomonaspalustrisTIE1MPIEIKTHRIYRDGKAVNFQQTKNIGGPIVPKVIVLHDTAGHLHGRDSIVWLRGGPGQSQNSSAHVVIGRDGTITQLAAFNVKTWHAGISNWRGRANLNGWAVGIEIVNPGGPLRTLGNGRYQGIDLIDTKADPSLKVRPGVFPPLTPDGKAVPRTAGYWLEHSPEQIDAVVELCRALVAAYPTITEIVTHWMIAPTRKVDTNPLFPIDEVRRRVWPARLVSPVAKFADLDDEAVDAIARSAPGEIEQHEFPPRPGSELEPDWTASASESAELEDDGNASEHPADLPAPTEPHPLPKPLVEFVQQRLRALGYYEVGNIDGDFAGRTEDALVTFKRHNGLPPTTDVDDATLRALADASPREIGDARARATPKDVSKIVPAVRQAGRSKLLAWLLGAPSAAVAVLQGAAANVSSVMSELSPIMGWLQAVPGWVWALLIVGIAAGIWWSARKAEADTVDAYRAGRLT
707910..708122                     hypothetical protein; Rpal_0663                                                      N/A                 RhodopseudomonaspalustrisTIE1MDVFPLIMAFVGIIVAVITAIIIAIRARWVRDTYGPDFGIVDKVDAVMTPELWVAASIAIVLILVGAGTP
708119..708517                     PHAGE_Rhizob_vB_RleM_PPF1_NC_025427: hypothetical protein; Rpal_0664; phage(gi712912728)     1.98e-10            RhodopseudomonaspalustrisTIE1MISLAALAGFAARPIGKAALIAFGLAALVAIGGLGAWRAAATIRAMISEAAATAKAERDAHWRAEIAEANAKVARAEAEQARAAMAAESSIKAAEKGREDALKDLEKQNAALSDGDRRCLGRARVRLLNQTR
708444..708719                     PHAGE_Rhizob_vB_RleM_PPF1_NC_025427: hypothetical protein; Rpal_0665; phage(gi712912729)     9.85e-05            RhodopseudomonaspalustrisTIE1MRLLVMAIVGASAALVSGCSTKPADEPTVLLSMTRPTVPETAKQKCDDPVPLPDRDLTERETASAWGRDRSALRTCEGRRAAAVEAIEPQQ
708716..708937                     PHAGE_Burkho_KS10_NC_011216: hypothetical protein; Rpal_0666; phage(gi198449269)     1.17e-10            RhodopseudomonaspalustrisTIE1MTDQLDEAQALEERERDDCIARAAGQIKGHGATHCVVCGEPIDEARRKAMPSATRCVDCQESRERWSRSHRGR
708937..709392                     conserved hypothetical protein; Rpal_0667                                            N/A                 RhodopseudomonaspalustrisTIE1MGMSWVEFVSWAKDIWWVLSAPVAAIGLAGMYYLRGQFPTKTTFDNQIEAVTTSISDLSKKIDDNEKKTSERIVKSERETSERMAKLESDVRQLPGRTEMEHLSDRISRVETQVAASVETIKGVEKTANKIDRTLEMILGHMLDEKREKIG
709389..709700                     PHAGE_Pseudo_JBD25_NC_027992: hypothetical protein; Rpal_0668; phage(gi100030)       3.38e-08            RhodopseudomonaspalustrisTIE1MSDTLAEVFDKDRRLVLLRLLAEQDNYELSAPLLTKAAQELRHRVYPDVVEADIVLLDQHRLVTRSEIELSGRKMTIATLTKLGRDVAHGRPHPMVARPSPKD
709705..710283                     PHAGE_Pseudo_JBD25_NC_027992: hypothetical protein; Rpal_0669; phage(gi100031)       6.41e-13            RhodopseudomonaspalustrisTIE1MANRPSSIDRLPQEVRDWIGRLRDQGCTIDEIITKLRELDKDAVPSRSALGRHLKKAEEVAERLRKSRAVADVIVRRLGESDPDKTTRMNIELMHNILFELATQTEGEDGEPVTFDPMQVMLLAKALDHLGKASKDDVARTVAIEKRAAEKAKAEALRQTEKAIAGAAGTDGQVDGAALLKKIREDIYGITT
710280..711605                     PHAGE_Rhodov_vB_RhkS_P1_NC_031059: replication and recombination DNA helicase; Rpal_0670; phage(gi100033)     1.12e-156           RhodopseudomonaspalustrisTIE1MSAAAVPLYGFQRTWFLDRSRFKLGMFARQTGKTFTTTLEITDDCFEAAVQSRRERWVILSRGERQAKEAMDEGIKRHCQAYQLGFDAQEFDWQGQAGSYKALEVTLPHGSRITALPANPDTARGFSSNVFLDEFAFHKDSREIWKALFPVISAGHNLRVTSTGNGKDNKFYELATGKDDVWSRHFVDIYKAVEDGLPRNIDELKAGINDDDAWAQEYELKWLDEASAWLSYDLITACEDPRAGDPSGYRNNPCFVGRDIGRRNDLHVIWVWELIGDVLWERERIEQKRATFAAMDAAFDDVMTRYRVARACIDQTGMGEKVVEDAQAKWGSVVEGVLFTIPNKLILATAGKEAFEDRKVRIREGDVALRADLHKLRKVASATGAPRFVAERDDDHADRTWAAFLGIHAAGDGVPAYDGYQSARPDAGSNLFETSGGRALW
711599..713191                     PHAGE_Rhodov_vB_RhkS_P1_NC_031059: membrane-associated initiation of head vertex; Rpal_0671; phage(gi100034)     4.03e-68            RhodopseudomonaspalustrisTIE1MVSILGPDGNPVDTSLLSKEVATPTVIGVRAVHHERVATGLTPERLAYVLHQAAIGSARDYLTLAEEMEERYLHYASQVQTRRLAIEGVEPSVAAPNGVPTKIVDFVHELVEDPNFHDMLGLLTDGIAKGYAVAEPIWEYERKALRPVAYKWRDQRFFQFDPVSQTELRLAVDGSSEGEPLAKPTFIVHAPRSKAGIPIRRGFARAAAWAFMLQSFALKDWSAFAEIYGIPLRLGRYHAGASEGDKKALLQAVRSIASDAAAIIPQGMQLEFIETKGQRGEAVFGSLLDYLDKGVSKLVVGQTMTSDNGASMAQAKVHNEVRLDIQRADGVQLSNTVTRDIVEWAVAMNFGPQDVYPRVVLPVAEPEDTKAMADGVAKLVPFGLRVKQSEIRGKFGLSEPSDTDELLTPQRQTSTQHEIVAANDPKKAARLSAGDCRCPSCGGTRSATLAAEPNAEADELDELVADAMADWEELVDPLLAPLREAVARASSFDELLAMMPELAAEVDGSKLAEALALLTAKARGLGDVKD
713194..714375                     PHAGE_Rhodov_vB_RhkS_P1_NC_031059: RecA-like recombination protein; Rpal_0672; phage(gi100035)     6.68e-49            RhodopseudomonaspalustrisTIE1MRLTRRQTLAMLAQLAAVKRGFQTPPEILDYFRDKNLKPAFSWLDVWGEEHAHAFTVAGVTETRVLTEFKEAIDKALTAGTGFEAFKADMQARLTPRGWWGPKVVSDPTGKWKDKTVDFTKPGRLETTFWSNVRSARAAGQWNRIQRTKESRPYLVYVRSVAERKRPEHLAWVGTIKPVEDSWWRTHFPPNGWGCKCSVQQLDQEDRDAYLAQDGYSEDAPDFGEVDYVNRRTGEVTKVPRGIDPGWQTNPGLARAQTLVTQLTETLAEAGGLRAKPTIAKLWQGNWPKAMAKLDETVQLPVAASPRVAEALGADTEIVTVANELVAADIAAGKVADAGRYAIVQRIIDAGRLISGARNGLSRVRAMIDGKSWTLTLRKGDDGSVAVEKLTSR
714647..715609                     PHAGE_Rhodov_vB_RhkS_P1_NC_031059: hypothetical protein; Rpal_0673; phage(gi100037)     7.36e-09            RhodopseudomonaspalustrisTIE1MTTLAVDPTLSAEGDWPRWVQVTPRGEVQVRDGRRFTFEPERLVARFKADAVDVPADLDHAISLKAKNGDRADAVGWISQLEARPNGTWALVDMLDAGKEALAKKTHRYISPTFHHTAGLATWLHSIALVAAPALAMPAIASASLTTPQEPHMPNEIAKALGLAETADEAACLSAITTLTTGTVAKAVHDQALANLAAATGRVAELEAQIATRDKADHEAKVTATLDAALKAKKIVPAQRDKYASLCATPAGLAEVQALLDVTPATLQSSGLDDRAADTGDVAQPVDLLAKANAEIEKAQKVGIELSLADAIVKVNQGIA
715609..715998                     PHAGE_Pseudo_JBD67_NC_042135: hypothetical protein; Rpal_0674; phage(gi100031)       9.57e-16            RhodopseudomonaspalustrisTIE1MSAELIKSFVADAAIRGYRICAFHASKQAAIEGASNTAALIGVSTSTGAKAAGVVDVIQSGLGEVTLGGNVGRGALVTSDDQGRAVVVPAPAVAAKTVRTIGQVQASGVEGDIVPIVLAPGAVYVPASS
716008..716084                     tRNA                                                                                 N/A                 GGCGGGGAAGAGCAGCCCGGTCGCTCGCCTGGCTCATAACCAGGAGGTCCGCGGTTCAAATCCGCGCCCCGCAACCA
716133..717095                     PHAGE_Pseudo_JBD67_NC_042135: hypothetical protein; Rpal_0675; phage(gi100032)       6.39e-91            RhodopseudomonaspalustrisTIE1MAVNRPFPVNPALTAIAIGYSNPANTLIADQVLPRVPVGSESFKWQEYSLSDGFSVPDALVGRKGRPNKIEVGASEKDDSTNDYGFDGETPIGDINEARRQREAGLSNYDPRARLAAVLTNKLLLAREIRVAGLVHNSASYAPGRKVVLSGTSQFSDYTNSDPIEVLKAAIDGTLIFRANTLVMGQSVWSKLSSHPVLVNAIRGNLTNKGIITREELARLLEIKEVLVGASYLDSAKKGQDPSLARVWGNHISALYLDPAATNTDGVTYGFTAQVGTRIAGSIADPDIGLEGGERTRVGEKVKELIIAKEVGYFIENAVG
717108..717407                     translation initiation factor IF-2; Rpal_0676                                        N/A                 RhodopseudomonaspalustrisTIE1MANETDDEKAAAAKAKAAKAKADKEAAEAKTKADAEAKEQAKAAKAAERAAKKTMQDHVVTREVMHDGELCSAGDEISLTKAQHAQLFAVGAVEEPWAD
717511..717795                     hypothetical protein; Rpal_0677                                                      N/A                 RhodopseudomonaspalustrisTIE1MSNAAPDFNRANFVDGQDAYKSGDTVLDVIEHVVAEAGSGPAGAANALSFVAGFLDGVIADIRRASKPVTRTELHHVGAVLMPQRADRPEEKIR
717792..718019                     hypothetical protein; Rpal_0678                                                      N/A                 RhodopseudomonaspalustrisTIE1MTAVRKPRVPSKTPVTRGAIAEAATAACRRVYKGECACEKSGASDPCNDMRLVAVAVLASAAPGVLKELIAAERS
718019..718492                     PHAGE_Rhodov_vB_RhkS_P1_NC_031059: clamp-loader subunit; Rpal_0679; phage(gi100041)     9.94e-06            RhodopseudomonaspalustrisTIE1MTTFAALADVLARYPAEATVLAADETTRERDDSRIEASLVDATAEVRAILAARYTRDELERIDDDSRGILRIYTIDIALYRVALSFGRSSERVKERYDVAIARLNAIGKGTAALTFDGPGGGGTGSAGAQPPGSVSPNEAIVIANERVMTRDRLRGW
718492..718986                     PHAGE_Rhodov_vB_RhkS_P1_NC_031059: sliding clamp DNA polymerase; Rpal_0680; phage(gi100042)     7.84e-17            RhodopseudomonaspalustrisTIE1MAEGVLIEVDITDLTSALARLGGLDNVDAEPLMSDIGARLEFSTRERILSTKTAPDGTPWAPNLAGTSILMQSGQHLLGSIAWTASATETEVGASWEYAHVHQNGAVINAKNAKFLSFVVGGRHVSKKSVTIPARPFVGISAEDEAKIDRLAIKFVDRQLGGGQ
718983..719570                     conserved hypothetical protein; Rpal_0681                                            N/A                 RhodopseudomonaspalustrisTIE1MIEPATIAQRLDRAALVIFLDAVEARLKVLFPDVTVRQHPGRIDVSDIIEKDIFNPPMLAVAAVRWKFDGDLDGSWNLDVEVAVYVITAETVVGTKAVPRQEVAHALSLGVLQILGDIDGHRWGLQCGISSPEKVEARPLFTSETFAKGAAYYVVTWTQGLYTLGGSPLDRPEISEPQISDFDGGPVDDSDGAPV
719567..720187                     hypothetical protein; Rpal_0682                                                      N/A                 RhodopseudomonaspalustrisTIE1MTTIDPDVVQFRRYLRGLEKQIVEVDQRVARVVMHGKVIKDGVRKQGDDWQVRLELGRDVDDKPVESPWVPVQPLSSGSLKIKVKPSEGQRYTLLSPSGVIGTGSQAIRAPFDDDHPAPKGDEDLVLEIGNAKLVIKDGLIGLKVGSNEIELKADSVNHVIEGGDGFLVSKGSKFWHLGVEEKDQKATPKASTEDGPAKWVKAKAG
720193..720474                     hypothetical protein; Rpal_0683                                                      N/A                 RhodopseudomonaspalustrisTIE1METETKSYRITKPRPIGGRMRKPGEIVGLTAREYAAEAGWGGLEEVKAEATAAEKVEQAVTVEPEVEQQITSTDNPDQPETAETAAPTKKRAK
720478..720894                     PHAGE_Entero_Arya_NC_031048: hypothetical protein; Rpal_0684; phage(gi100012)        6.75e-08            RhodopseudomonaspalustrisTIE1MAERTTRTGVDARTGRILRGRAHAEHCVRRILATRLDTRVMRLDLGANLAPLRGENLTAINVMRAYSAMVTAVHSQEPAVRFKQVAPQLVDGRNGAIAFIFSYLFYPYGHLGDYSVVEDADMRVPVTALARGSAAVSA
720891..721829                     PHAGE_Escher_P2_NC_041848: hypothetical protein; Rpal_0685; phage(gi100032)          7.18e-24            RhodopseudomonaspalustrisTIE1MSTAASLDLSRIGAPTLVNIDYEAALTARLRNFRSLWDAARAKDPTLPLFDVIDADGNPLTQFDANVVLEQEFAFGETEIGQAINDHANALRLATAVSADLDHLAVTYKATSRLVLAPATDTTPEVLESEAELRERAQMSDEARPLFGLTPPGYAWRVRKLFGDRVKDVRPLRRPGGHMDLMILGREGDGSPAETLIGDIQAAFEGEAGSHSTDIVTARPARIVATPVAVKLWVSRGPDPALAVALATTAIAALGSERHRIGETLHAQAIGAVAKSGVVRNVDVLAPLADIQGGEDGAPFISSIAVSWGIDG
721826..723085                     PHAGE_Vibrio_vB_VpaM_MAR_NC_019722: tail protein; Rpal_0686; phage(gi428782739)      6.78e-12            RhodopseudomonaspalustrisTIE1MTADFTPIQPTLNDAERCHSLVNAARWPVLFAEAAKLRTLWDPWACPVDQLPLLAWAWSVDFWKAEWPEHRKRQVIAESRAYHEAKTTVLGYRMALGYVDAEFVRARLPRHAFFAGAAPTQESHDRWLAGLPEIRIYTAVFPIKRRPVRFLQADGTIVQRTLKGRFVGRRFRAHSAKSIVLDGRRPELRRPDGSVQRLVFEGVRIDSFGRLLSDPERLVIPAPLRNTFQVGKRLRGRFVGDGKANGKRVISLSFSTGVDVFRPNAVSPGLTAIDVVPRQMWDVMPPGRGWFISRARKGRGIQRNRADELAYLSIRLADGSRPEYGGRMRNRIGRTRIRRAPFTATVLAHLAGPPKHGFPVGRFVKVGPEARIAEAIKALAVTQAARDTVYLDINSVRPITYGDLARLPENVRAGAIIRI
723097..725418                     PHAGE_Aurant_AmM_1_NC_027334: hypothetical protein; Rpal_0687; phage(gi849119868)     1.29e-57            RhodopseudomonaspalustrisTIE1MYKRVTWEIDQEGTEEDLGRMGQWPQQGISQLTGDLLVSGRMYKGFTTLKTNVSAIEIAPGRIYDAGAMYAMEATLPMSLAEYVPLTAGQKVWVVLIGQGREEDGYTEGRKYEQEVPQSDGSFVVQQIIKTATRAKVRNAILQAYAGSPSLNPVKPSIPLGTVAIADILLSTSGIESVTMRTANEAPELDELAAAYTALLVRLGLVDQEMAGLRNDLAALARLLKSSVSRITVQAMQGDLAAIKDRLDIPDTGSPYSADNFLDERESDPTNVDYKARVLEGIRFPAANQDKRPLALYNPNDGNLMHASAGIICPKYEVVEGVKLWERAGSTPLGGTVYQSMELTQMLMSRQETAYGDYFETCTNSAWWHSGQYDPAKGIFRIGNETYELAQYTNDQFQWGLGHAIVRVRKFWTTTVETPYEVYAPVSHTIQGVMKSQSWLQSQDRWSPGKRLAIESWSAGAEITAALVECGENGVPLPGRMLTKTTMAASQFKTFPEGTRFPWSIPVLLQAGKRYAYLFATTGDVTVAYAEGQKFLSGNYFETTDGAFFVGDLTRDLCHVTEFCQFPLTQLTVLLQGINLDGGIHNIRIRNAEVVPENAKREFQLQVGGAWQKIAAPAGDDTLFGSGVTPYYDFRLVLTGTQWAMPILDMGASEVELFRADDDLRHISDVIAFGSSLDTVYVKATIGAWDAARHTIAARLLHGAGYATLKTHDAVETKPVIGPDGLVRADAVEKIWTFTFAAPGISSCKIDFIGTTNNPRVTFHVERRVQTTE
725422..725625                     hypothetical protein; Rpal_0688                                                      N/A                 RhodopseudomonaspalustrisTIE1MATKKTTEAADTIEISDESYYAVKASGRFKAFGVGFGTQSETEVTGALLKKLLASEHGTKITGYSAV
725647..727221                     PHAGE_Rhizob_RHEph04_NC_041908: DNA polymerase; Rpal_0689; phage(gi100036)           2.05e-07            RhodopseudomonaspalustrisTIE1MARKFETDYRVAKTSEVLPTENKFRFDVDLRLDALELALKALGSGADTLVARVLRVIEQEIAPRAAEIDVLLTDYREGVPAAVVAEEADGRQFLTPARRASILSDLRGGADDAHDTLAKLAALIAALDAAKATPADITTAVNALKGAAPAAYDTLVEIATKLTEDDSVIAGLLTNVGNRLRLDANEIYSAAQKAQGLANLGIADLPSGTFVKADRSSVAFVKTGAGSVSLKAGTLIGLSGALYSFASATAVQMPTLAAGTDYAIYLCNDGTLRADASFTAATGFTAAQCRQIGGFHYAPGGNAAARAGGDATPAINAYSLWDLKFRPSCWDPRGMTLVAGAFWCDIYLTGVDHHINGTSKYNVTIADGSSPPKIPAALGGNGTSTFSTFTWYEANEVMRDHGKDLLSYGEFAVAAFGATEATQSGADPVSTILRQAFTSKWGVMLATGNMWVWGHDFGGADAGAVWSTSPGRGQANQQPCAVVFGGGWESGACCGSRASSWDAPPWISYGNFGARGRCDHLAHL
727280..727924                     PHAGE_Campyl_vB_CjeM_Los1_NC_041896: hypothetical protein; Rpal_0690; phage(gi100059)     6.49e-08            RhodopseudomonaspalustrisTIE1MTIINTKADLNALRGTEAYADALRRLIGATTMWVNDGPAGQAPVWRQESVGDTLAQLNLTMDELLAECAAVGIVPHAPEAPVSPPRLSPTAGELIAYTMSHRDKVIDGGVTFDGVVYQTRPTDRENIIGAALMASLALAAGAQPGDYRWADPAADFEWIAMDNSKVQMDALTVIELGKAQAARKQELIFKARWIKDQIAAGAITTTAEIDAAFA
728021..729478                     PHAGE_Escher_vB_EcoM_ECOO78_NC_041926: RegA; Rpal_0691; phage(gi100039)              1.25e-53            RhodopseudomonaspalustrisTIE1MAAMTKNHGVRFIDAPEDARTVQVPDFSTIAIVAPADEANPSIFPLNTNVHLYGDEADKIATLGDAGELSMAIDDILAEGINASMIIRRVEKKTTRNEQLGAVIGDPSDRTGIWGLLDARAQTAVRPGIIIAPGFCNESPIGATVATMTDQGQDYTQATVTFNAPGAVVQPKGHCVIAGGKVSVIIDDAGFGIPNTCTMAIAGDGTGAEGTVSVGPVANPVALALSAVAKKVLGIAVIDGPNLNRTEAALWAERLRRDNGRYLYAIDPALRRFAVLDGSDDTILTRPASTTVAALFAKRDRERGGPYWSPENQTSSAIVGTARPVSYYDGEVDHEANFMVSNGVNTFIEGKELYGSETLSNDSNWRFINKVRTENAIRAALPAALRKWRGENFTAHNALMIVKTIEYFLDELVKLGVVVGYTRYFDRSLNPNANMRQGILRIELPHENTPIISDIQIGMRSYLSAFDVLAADIQQALGNLTPIAA
729491..730012                     PHAGE_Aurant_AmM_1_NC_027334: tail tube; Rpal_0692; phage(gi849119873)               1.21e-08            RhodopseudomonaspalustrisTIE1MEFVRKAGNMYAEGINLWLSLASYKLPQPKVKTEAHLPGGGIMELDVPIGAIEPLELQFSLKGVPPSVLGQFGMSLGERKLYTIYELIQDELTGAKRERTISMRGLFQEADPDEMKGRGVHGYGYKIKSITDYEDVIEGYGILARFNFGTNFWQGYGSNIGSATDNRILRIAG
730294..730752                     hypothetical protein; Rpal_0693                                                      N/A                 RhodopseudomonaspalustrisTIE1MAEELPPPVDTEPALKPVAPPPGSPDYVRRNGADVSGATETTPAAEASKPALPPLVAALGFRGERSKSVTLAHPFTFEGCEISEVTVRRLTMMQVDNLVTARRHDDLYEVFSEMTGLPASVLRGMDCDDGDRIIAEGKDFLPRTISEAFDLP
730755..730913                     hypothetical protein; Rpal_0694                                                      N/A                 RhodopseudomonaspalustrisTIE1MRDWRGFAARVASVLSTPLPAVMAMTWDEVLLWWCEANDIDSQTWGVLRSDR
730910..733198                     PHAGE_Escher_vB_EcoM_ECOO78_NC_041926: DNA polymerase; Rpal_0695; phage(gi100036)     2.75e-27            RhodopseudomonaspalustrisTIE1MSNLDVALRLRLINQLGGPAKEAKRELEGVGAAAKKLDGAKADKLARDIAKTKTEATAAGAALEKTAAGAKKLDPAKADRLARGLGKSKTEALGSERALRQVVNALRQLDGTRAERLVASLRRANTAAESLARSLRRVRTEGHGVGGDGAGGGLKRPTASGGGMSGALVAGGARMLGVVGAGYLAYRSAANSVRTVVDQDKAWAEVRKKVDGTPEQLEALQVQLRAQARKYGLSIAEIFEQAAEAGAAGIEREDLTRFVELTTRASVGWGTTARETAQRIAEIKAGTNMTLPEIDQLANKISALGLNSAAKERDIVEMFHRSGAAAKAAGVQYDDTLAILTAIRSSGMQEEVASRWFNAFAFDIAGSNAKGDKVKEAWKRLGFNTKDLAQGMKTNATGTIMKVFEAINKLEQTKKVEVLSAIFGQGWQDETARAAQAIQEIKKQLDFVHDPANWQGKMQSSLDIQLSTVANHWERIKTAATEVANQIDRATGASKGFNSATESLLQTFERWIGKGPGADGKKPGPEQPRADEPAGPKSRFPGRMQSYEHARATREALRARAPKLSDFSGRNQMEDYKRAKAKYEAEQRAMRPARGPMTPLPEVPNYTPVPGSHRSGIPLPVPRPTARNYTPVPPAAADQAETTMRRITQVVTTEGGKAVEASRSAAEQVRAIWNFSVSPQISPRFGGAAGGGSSGGAGAGSGGASPAPAPAAPSGKRAGLGGSFNVAVTVNGAGKNGRQIGSEIARELAKLGNSSSSLFDTV
733141..733153                     attR                                                                                 N/A                 CGCCCGCGAGCTG
733213..733578                     PHAGE_Escher_P2_NC_041848: ssDNA binding protein; Rpal_0696; phage(gi100044)         9.13e-06            RhodopseudomonaspalustrisTIE1MAIGPHVFQAVGLNGQEIDTTNEANWVDVPRFGMVDGAQMHGFARPEMSIRGVLFPDQLGGLPDYDAMKVSYRIGRPLPMLRMGRGFIGFFLGAVTIERISDLESYGGKKIAFTIDLKGYS
733575..733811                     PHAGE_Burkho_phiE12_2_NC_009236: gp48, phage Tail Protein X; Rpal_0697; phage(gi134288701)     1.65e-10            RhodopseudomonaspalustrisTIE1MTSFDRLYTVKRDGERLDRICKNELGSERGGTMESVLKLNPGLAALGWTLPLGTTIKLPPRPSSEPKRPVVKRIWGES
733808..734884                     PHAGE_Escher_vB_EcoM_ECOO78_NC_041926: replication and recombination DNA helicase; Rpal_0698; phage(gi100033)     1.12e-29            RhodopseudomonaspalustrisTIE1MTPVLKIMKGSVNLMEGMLPYFISATFTDNAGDEDDEFEIELDDAWRQIPIPEEDDLLIVFAGYKETGIPMIGAFKVNGWETGCEQGPETIKITARAASMSGEFKAGGMKHWHDSTLGQILAETAKAAKLSLVIDPELAKVKLPYALRWEASPIDFANRIAAEAGGIAKPGGQKLAVTKRGSGKGADGGELPAIRISRIGCSGWRIKGEPRPRHGKVEASYHDPKTGKRKSIRYSTGSKGPTHTLLHPRASEDEAKRAAEAHSRKLNMLTGGGHFIWPYEPSWSAGAKVIASGFGDGVDGTWLSESIATTWAKDQPVLSTITVKAPAEGKESGSGGGSSGSSGSTGGEAGVPSTGNVA
734897..735313                     PHAGE_Sinorh_phiM7_NC_041929: holin; Rpal_0699; phage(gi100268)                      1.98e-26            RhodopseudomonaspalustrisTIE1MDAGFSNRWVAIFVVSFAVAATALFVLLLVASWGLITAKKASACDRHCDGLASWYGSESGWRTASGQRFDRHGMTAAHRCLPFGTRLRVTYGGRSVVVTINDRGPFIRGRVLDLAEGAAARIGITRRVGVGRVTCEVL
735313..735660                     PHAGE_Sinorh_PBC5_NC_003324: hypothetical protein; Rpal_0700; phage(gi18071287)      3.60e-08            RhodopseudomonaspalustrisTIE1MGRLVGSDRTPCINPRCRRTFDAAKHGHGELICGKCFRSLPQPVRDQHRRLWRHLRKWRRAAARTTDEFKRARIESIVDAYSSQINLHWDQVLRPALITPEKPIGLEGFLAEVGL
735980..736696                     PHAGE_Propio_PFR1_NC_031076: RegA; Rpal_0701; phage(gi100039)                        2.39e-60            RhodopseudomonaspalustrisTIE1MFVKRRRIGPATVYLGDALEIMPTLGPVGDVLTDPPYSSGGNVRDLAKSTNEKYLTGPAKYPEFQGDTRDQRSFLAWSTLWMGRARALTRPGAMLVCFSDWRQLPVTSDAVQCAGWVWRGIVPWDKTEGSRPQKGRYRVQAEYALWGTNGARPPVGPVAPGVFRMSVPRIKHHVAGKPVDLMLGLMGVLDGPILDPFMGSGTVGIACLQRGLPYVGIEVDETYFEIACGRLEEALKSP

#### region 2 ####
complement(2272138..2273175)       PHAGE_Entero_Phieco32_NC_010324: Appr-1-p processing enzyme family; Rpal_2099; phage(gi167583592)     4.76e-24            RhodopseudomonaspalustrisTIE1MAIRLVTGNLLERRVDAIVNTVNTVGVMGKGIALQFKRKWPANAKAYEAACKRGEVVPGKMFVFDNGGLIAPKFIINFPTKRHWRQPSRMADIEAGLVDLIVQIRHLQIRSIALPPLGCGNGGLDWDQVRPKIEAAFRELPDVDVELFAPAEAAGVRQLEPEAQKPRMTPGRAAILKLLSIYREMRYPLSQIEIQKLVYFLASAGQAMGSLTFKKHIYGPYAPELRHVLTKMDGAYLHGVGDGSKPSEITVVGEALREAEAFLNSHQDFETVRRVEQIARLIDGFETPYGMELLATVHWTANETKTTDLNRIVEAVHSWNERKRQIMLPANIKSARDRLVTEQWL
complement(2273187..2273858)       conserved hypothetical protein; Rpal_2100                                            N/A                 RhodopseudomonaspalustrisTIE1MPPPIPTAIFHITAIANLDSIAKQGALLSKNEAAARGLVAANIAYDHIQGRRAVRTVPIAPGGTLHDYVPFYFAPRSPMLFTINQGNVPDCIYRQDDIVHLATTAQTVADTGQQIVFSDIHAALDYARFFSDLGSLTEIDWRIFFEPPRLEGYCKFWQNRQIPIHHLRRLEIRQAEFLVHGELPIAAISEIGVKTAQAAAQVEQAVAGSGWTPTVRVVPGWYF
2274202..2275128                   hypothetical protein; Rpal_2101                                                      N/A                 RhodopseudomonaspalustrisTIE1MSDDPPPRRYLPRGFPPEGLAEARRLYEDTDVPLADVAARFGTNRRCLGKLAESEGWALRWSRPRLTAVPRAFRFSDEMIAYIRQRYEDSDDTVESIAADVRTDRSTIERLAEQQGWLLRKNRPPRDLPETLQMQLEAAATLLQARAAEAGEAVAALPPPAQAVECEAEASVVTDTAVTETVAPEPADPAAPASPEAALSLARRLERAVETQLRKVENLREDTTLGGHRAVEAERIARTLAALTQTLFKVRQLRDPERALSAADDEMPADADGFRLELARRIETFVGGGTDRALPAPGQPAQPGPAAG
2275205..2276365                   PHAGE_Arthro_Tank_NC_041961: hypothetical protein; Rpal_2102; phage(gi100015)        3.13e-85            RhodopseudomonaspalustrisTIE1MLGGRGAGKTRAGAEWVRAMVAGTPPYATRPHGRIALVGESWHDAREVMVEGESGLLRITPRRERPEWIASRRRLQWPNGAVGEVFSADDPDSLRGPQFEAAWCDELAKWRYAEASFDMLQFGLRLGARPRQLITTTPRPLPLIKRLLADPHTRVTRAPTRANAAHLSPAFLETVVARYAGTRQGRQELDGELIEDRPDALWSRDRIERARVAAAPPLVRIVVAIDPPGSSRPGADACGIVAAGRSAAGDYYVLEDVSSDRLSPAAWATRAIALYRRLEADAIIAEVNMGGEMVRAVLHETDAAIPVREVRASRAKFVRAEPVAALYEQGRVKHVGCFPLLEDEMCDFAPTGLSSGHSPDRLDALVWAITALIGGAHAGGPRMRML
2276463..2276747                   conserved hypothetical protein; putative signal peptide; Rpal_2103                   N/A                 RhodopseudomonaspalustrisTIE1MSRSITIMMAMAMALGSAALGAGLMAGSGAALARGGAANIMDSPGYQRALQESRKRLQQQPGPSMAQPFAAPPVAYPHPERRPGPKRRHRAPRH
complement(2276767..2277075)       conserved hypothetical protein; Rpal_2104                                            N/A                 RhodopseudomonaspalustrisTIE1MLRVVLLLLIALPVVGPARAADLPMHSKIGKIFAEPQPKPRVRQSLEMESGSPVYAPEVDVPPIVHGYYGKPRSYLYRSYYGTDPNLIFGRLPYACGWYGYC
complement(2277158..2277925)       peptidase S1 and S6 chymotrypsin/Hap; Rpal_2105                                      N/A                 RhodopseudomonaspalustrisTIE1MIRTLTFGCLLGAALASPAAAMVGGAPEATGALGRALVTIVGSRGNFCSGTLIAPDLVLSAAHCVGPGADYKVVQYDAQRQPSLRDVARVAAHPQFDMGAILGHRASADVALLKLAAPLPGKAPLPIAAPDDPLAAGQDFTVAGIGVTRRGDGKSGGTARSATLTATGRPGRLQIRLTDPAATDGRAGLGACTGDSGGPALQAQNDRLVVVGVVSWSTGPGNTAGCGGLTGVTPLTLYRDWIARTAQSWGSALSR
2277990..2278550                   PHAGE_Brucel_BiPBO1_NC_031264: hypothetical protein; Rpal_2106; phage(gi100008)      2.86e-10            RhodopseudomonaspalustrisTIE1MPMLLLAGPAAEPWTVTDLKSFLRVEHDADDAVIASLLTAARAQIEASTCKMLLAQRWRLVLDAWPRDGRIVLRGGPLRSLIAVRTYDERGYSHGLDLDSFVLDLAGGVIASPPWAMPEPGRAVAGIELDLELGYGTAPDDVPPPLRHAVRTLVAQWYDNRGGAAGAALLPGGVAAMIAGYRAVAL
2278547..2278867                   PHAGE_Paenib_Willow_NC_041867: hypothetical protein; Rpal_2107; phage(gi100008)      2.35e-09            RhodopseudomonaspalustrisTIE1MIDPGRLNRRLTLLAPVETDDGQGGVVRSFAAQAVLWASVVPLAAREGVAADQDRAALRAKITLRAGVALSRAHRLADGDSAYRIIAWRSRERGALLEIDAETEQT
2278864..2279274                   PHAGE_Geobac_GBK2_NC_023612: tail protein; Rpal_2108; phage(gi589893772)             6.97e-13            RhodopseudomonaspalustrisTIE1MTPASVALRAAIHRALTSDTALLAALGGPRIYDEPPREAAFPFVTLGEARISDVSADDAPTQEHQLTLHAWSRQGGHKEAHLITGALLQALDDVPLAPSGHRLVNLRFALADIRREPDGRTYHALVRFRAVTEPIS
2279287..2279694                   PHAGE_Rhodob_RcapNL_NC_020489: gene transfer aget (GTA) orfg9-like phage major tail protein; Rpal_2109; phage(gi461474972)     1.04e-25            RhodopseudomonaspalustrisTIE1MGAQKGKDLLIKIHDGTSYVTVAGLRSRKIAFNAELVDITHAESADRWRELLAGAGVRRASISGRGLFKDAGSDALVRTAFFSGLISDCQVVVPDFGSITGPFQIASLEFAGEHNGEVTFDLTLESAGALGFVAI
2279704..2280021                   gene transfer agent (GTA) like protein; Rpal_2110                                    N/A                 RhodopseudomonaspalustrisTIE1MANRHRGEIEAELGGQTRTLVLTLGALAELEAAFAATDLVALAQRFGSGHLSARDLVRIIAAGLRGAGEAVRDDEVAAMTVKGGAAGYASIAAELLAATFGEAAA
2280018..2280221                   conserved hypothetical protein; Rpal_2111                                            N/A                 RhodopseudomonaspalustrisTIE1MTPFPWAEAMQLGLGVLRLPPDQFWRMTPRELAAAIAGLRGGATAPLDRAALDELMRRYPDQRGPTR
2280218..2280811                   PHAGE_Edward_eiAU_NC_042029: protector from prophage-induced early lysis; Rpal_2112; phage(gi100001)     9.98e-12            RhodopseudomonaspalustrisTIE1MTGSGTGEGCDCACVDDTTQKVDQLTTKTQALSSEAKGFARAMTSAFAQSVTGGKQFEDVLKSLALKVSDLALKAALKPLTTSLATGFDSLFSGLFGGSLVKNADGAIKPFAAGGVIGTPTYFPMLGGGVGLAGEAGPEAILPLARGADGRLGVASSGGATTVNIQIATPDADSFRRSETYLTGQIARAVARGQRGL
2280950..2281588                   PHAGE_Rhodob_RcCronus_NC_042049: hypothetical protein; Rpal_2113; phage(gi100015)     4.13e-55            RhodopseudomonaspalustrisTIE1MTPFHEVLFLLDVALKSAGGPERRTEIVGFGSGREQRNARWADSRRRYDAGYGVKTFEALQQVVAFFEERRGPLTGFRWRDRLDCSSAAPGAPVSPLDQGIGIGDGTRASYQLVKTYGAGFAPYVRTITKPVAGSVRVAVGGVEAAAATFACDPATGVVTFAPGHLPPSGAAVTSGFQFDVPVRFDTDYLEVDLSAFAAGAIPKIPLVEIRV
2281834..2283228                   hypothetical protein; Rpal_2114                                                      N/A                 RhodopseudomonaspalustrisTIE1MQRLIFLVLGLLLPMAADANEAVQAIPHRCENCTATPVEVATQAREMSDTCRSVHGTPRSGPDIQQGRFPDGPVFWAIDEVTFACDGAAALFSTNHGAMVHIFVETNDGHATQAFEHAASGVTLERSSDTNKVWLNVGGALCGQNTDGLSTADMRVCQRPLKWDAVTRKIEFAPLSEVRDLPETKNQEAQAGELPAKRIYDSGSELVSKRDYVLNEYWKDKIDLIRWKPRGAPQGTIFNWPFASPDGRSLMVSLLQAPAVCTPKCPARFINAQHRVVLEIMVCADRTKHGFSPDNRTFIACGERFSIPQVDERTALLDNAPPGSNPEAYLEVQRRLRTQPKNRPEPIRVDSALHNDSQMLIREWKDGSVEIAYDVPKQTLPVVQGTLLFRGTRSGSNYQGTAFTFRDGCAPAPYEVRGYRDAKRELVVLTGAAPRRGRGCEIIGDSARSNHARLVFDTRELGDE
2283582..2284493                   PHAGE_Rhodob_RcCronus_NC_042049: hypothetical protein; Rpal_2115; phage(gi100017)     3.13e-53            RhodopseudomonaspalustrisTIE1MLTIPTALQARLDAGVTTLAQCWIVRRRDGAVLGFTDHDRDLVIEGVSCRAGTGFSASEASQRFDLSVDGAEISGALDDTLLREADLAAGRFDAAAIESWLVDWSAPELRVLMARGTLGEVRREGSAFTAELRGLADLLSQESGRLYTASCNADLGDARCRVDLGSPARRGEGRVVAAPGTSTITVSGLNGFAPGLFTAGRLSWRSGTNQGAAVEIKQHRIVGGEVRLSLWQATAEPIAAGDSFVVTAGCDKLFATCRDRFGNSDNFRGFPQIPGNDFVVSYPVPGAPGNTGAPIGPVLRGDV
2284533..2284985                   PHAGE_Rhodob_RcCronus_NC_042049: exonuclease A; Rpal_2116; phage(gi100018)           5.21e-15            RhodopseudomonaspalustrisTIE1MNQPIDRDALVAEARSCIGTSYRHQASVKGVGCDCLGLVRGVWRACLGEEPEAPPPYAPDWAEAGGDETLAAAALRHLAPVPCDACDRGDVLLFRWRDGCVAKHAAIASSATTMIHAHDGAAVCEVAITPWWRRRLAYAFTFPGVADPLR

#### region 3 ####
3285552..3285908                   PHAGE_Bacill_SPbeta_NC_001884: histone-like prokaryotic DNA-binding protein family; Rpal_3021; phage(gi9630187)     1.44e-15            RhodopseudomonaspalustrisTIE1MAGRTVTRVDLCEAVYQKVGLSRTESSAFVELVLKEITDCLERGETVKLSSFGSFLVRQKGQRIGRNPKTGTEVPISPRRVMVFKPSAILKQRINANGAMPMSTEESDENTAQSASGG
3285923..3286675                   transcriptional regulator, MerR family; Rpal_3022                                    N/A                 RhodopseudomonaspalustrisTIE1MDKAPDAFRTISEVAAELDIPQHVLRFWETRFTQIKPMKRSGGRRYYRPDDVDLLKGIRRLLYGEGYTIRGVQRILKEHGIKSVQRLADAEVHASFGAVEAAITRSVTEEEEFEPVPGGIDADDDDYDGEDEGLDLHAAMAEPEHRGAPAAAPRRNITAEPRHAPHFDDHEDDGHDDDFAVEPTPVIAAPGRAPRFDLPPLEFPAAKAPPAPPPVDLGPLRAVLTDLIACRELLDAAIKDGRGQAESPEQ
3286993..3287070                   tRNA                                                                                 N/A                 CGGAGCGTGGCGCAGCCCGGTTAGCGCACTAGTCTGGGAGACTAGGGGTCGAAGGTTCAAATCCTTTCGCTCCGACCA
complement(3287119..3287328)       hypothetical protein; Rpal_3023                                                      N/A                 RhodopseudomonaspalustrisTIE1MITDERAIEIAEQHAKRHGRPIVNIPPNGAVDEIVTVDLRGIRPVVTRRPPDPIGQYTNRIGKDLANGG
3287237..3287249                   attL                                                                                 N/A                 ACGGCGCCGTTCG
complement(3287325..3287492)       hypothetical protein; Rpal_3024                                                      N/A                 RhodopseudomonaspalustrisTIE1MSRTLTEELALEQELLRRRVIHATRPRGAMNLSEEIEFCRRMEASPVPDEQEQKS
complement(3287489..3288544)       PROPHAGE_Brucel_1330: phage integrase family site specific recombinase; Rpal_3025; phage(gi23501849)     4.65e-21            RhodopseudomonaspalustrisTIE1MPRIKRKPLKLKGIKRVAMKLADGSVRVYLYHRATGEPLDESRLVESYAEAEKKKRRRGGKTLTDLIRFFDTSETFASLSAEHRKQYVWKFARIEKKWGTVPEDTFNNQDDADAFAADALAWHQEIGKTSRRSADNLMSALCRALSFAKEKRRIKFHPIPSFERLYKSERADKVWPPELQQKFISTARPAMQTAMILVRNTAMRAIDIRGFAWTRYDGQRVQIRSHKTGKWLWIPATRELRAHLDCLKRTGALVLLTPSGKAYTRRYFNEHFREDADAIGAGDLNFHDNRGTAATLLAEAGATAPEIAEALTWTVDKAQRIIDAYLARRGVLAANAIAKLEDYRDRQGKQP
complement(3288516..3288761)       PHAGE_Brucel_BiPBO1_NC_031264: hypothetical protein; Rpal_3026; phage(gi100038)      1.25e-15            RhodopseudomonaspalustrisTIE1MKRGMTKEEAAAYCGCETLAAFDQWRKKGIVPDAIPGTNRWDRKAIDQALDRASGLVTGSGELSPYQRWKTENAANKTQAA
complement(3288758..3289210)       hypothetical protein; Rpal_3027                                                      N/A                 RhodopseudomonaspalustrisTIE1MGGSQQRRQPVADRIEVDPIAWICWDLAFGNGVHQITNDAALAASRMTRRNYWLVEPLYSQCPPSPAGTVSVDLLNNERAVTDMLRGENNKLRADIERLTQGYRDIKTATIEGRVCDDVAWFDTITTLHDFCDCMINPAPWAATEPEAAR
complement(3289212..3289610)       PHAGE_Paraco_Shpa_NC_041868: membrane-associated initiation of head vertex; Rpal_3028; phage(gi100034)     5.12e-35            RhodopseudomonaspalustrisTIE1MTDTARSVREWIGKTPDSRPPPHVRVRIFTKHGGRCHWSGILIRPGDAWDVDHVIALINGGENRESNMAPILRGKPHKEKTRQDVAEKSRVYRKRKAHLGLSKPRQKIKSRGFEPAAPQRRATAEISKWRGF
complement(3289607..3289858)       conserved hypothetical protein; Rpal_3029                                            N/A                 RhodopseudomonaspalustrisTIE1MTWRDTAKGIIAKLTADLPKDAPFCDRVKLLRDNYPFARRSGFAYRVWCEEQRKYLAQFCPPKGSKRFPRLPLEIMLDEAAQQ
complement(3289855..3290271)       PHAGE_Sinorh_phiLM21_NC_029046: NinB family protein; Rpal_3030; phage(gi981221042)     6.36e-39            RhodopseudomonaspalustrisTIE1MTSRALLVLNSRAERQKAIDWITRVPAGTRVEFKEPQRTLDQNSRMWAMLTDIARQKTLEGRKWTTDQWKVIFLRALGHEHEFIPALNGAGFIPYGQSSSDLGVREMSDLIEFMLAWGAEQTPPVEWSEPRAKKEDAA
complement(3290268..3290873)       PHAGE_Halovi_HCTV_2_NC_021319: DnaJ-like protein; Rpal_3031; phage(gi509139477)      5.25e-07            RhodopseudomonaspalustrisTIE1MSIAAYPLHWPAGFPRWKMARAGGAFRTNFDTALSNVRKSLEAFAKDSGKKIEQPVLSSNIDMNPLTANTGKRPSDPGVAVWFTWDGLQVCIPVDRYDSPAANLQAIHHIIEARRTELRHGTLALVRATFTGFQALPAPAGQHWRDVLGLDSVPPASISRATIENKYRDLARERHPDKGGTSEQMAQLNNARETALREIAL
complement(3291088..3291714)       PHAGE_Xantho_CP2_NC_020205: hypothetical protein; Rpal_3032; phage(gi448245207)      5.25e-57            RhodopseudomonaspalustrisTIE1MAIEIFDVEQNSPEWLRARMGIPTASEFEAIITPGKTKAEQKTRRTYMLKLAGELLTNEPMGSANTKDMQRGHALEDEARDLYQFLTGAETRRVGFIRNGRAGCSPDSLIGEDGGLEIKTKAPHLLLDVIMKDEFPEEHKAQVQGALWLTNREWWDIAVYWRNLPLFIKRAYRDEPYIQRLATEVDRFNAELDAIVAEIRLRGEALAA
complement(3291725..3292738)       PHAGE_Pseudo_D3_NC_002484: hypothetical protein; Rpal_3033; phage(gi9635644)         2.01e-30            RhodopseudomonaspalustrisTIE1MNAIVTLDSILEPPAGTPALTAADLFGTGNVAQIVDAIEAQVRAEAFDVATEAGRKHIKSVAYKVARSKTILDEIGKEHVAEIKKQSAAIDAERKTVRDRLDALKGEIIRPVDDWESAEAERISGHENALVAIVEAGRGEGRGVYRTPADISAAIEHVRKLCRRDWQEFHERAEAAASEALSKLEAALAAAEQAEAERAELEALRREKAERDAADAAERQRVAQEQAEAERKAHAEQQERERAAQLAAWKAEQEAKAKQQAEEAAARAVDQERARVAAETAEREAAERKRADNKRRRDKVHAEIRQFLAAELVAPEVADRLIDAITAGRIPHLSITY
complement(3292743..3293534)       PHAGE_Xantho_CP2_NC_020205: hypothetical protein; Rpal_3034; phage(gi448245208)      5.89e-35            RhodopseudomonaspalustrisTIE1MNAQAETIRPLRAMTRRGAPQAQTAPAVHSPMDIVAAALSTGNVEMYREAVALMKEMEAFAARKAFSNALADAKVDLPIIEKNRHASYDNKAGRQTNYWHEDLAQVVDTVVPILAKHGLSHRWKLAGRPGEPVTVTCVISHRDGHCEENSLSADADTSDGKTPIQGVKSTTSYLERITLMASLGLASRKDDDDGRGGAQAEPAYVPPAGSITPDQADFLRSEIKAKGASEIAFLAAVKRRRIEDIPATDYAAAAMIIAKFKKG
complement(3293534..3293662)       hypothetical protein; Rpal_3035                                                      N/A                 RhodopseudomonaspalustrisTIE1MPTVFPGSAATLAEARARVALALHQLDRAIERETQAHQEDSH
complement(3293782..3294084)       hypothetical protein; Rpal_3036                                                      N/A                 RhodopseudomonaspalustrisTIE1MSNGNTVSVRRYEARMMDYFDRLPRSARVALASSRFNWIVGHYLRAFERGQSAREIVARIKRTDRIESARSRAATWGSDYPILRGELRRIPATEKKASRK
complement(3294081..3294194)       hypothetical protein; Rpal_3037                                                      N/A                 RhodopseudomonaspalustrisTIE1MIRQIIAHLDATDLRDFVAIVLFVCTGIVWAAIGAGA
complement(3294191..3294376)       PHAGE_Sinorh_phiM9_NC_028676: hypothetical protein; Rpal_3038; phage(gi966199474)     1.12e-13            RhodopseudomonaspalustrisTIE1MTTTYTAEELREFDLLTSEQSSQHQLIRIKARMAVKAFIAEHGREKCDAMFAELQKRDREK
complement(3294373..3294498)       hypothetical protein; Rpal_3039                                                      N/A                 RhodopseudomonaspalustrisTIE1MNLQNSTELRAAYERIAELESVLTLIRDGLADTALCQKVAA
complement(3294504..3294725)       hypothetical protein; Rpal_3040                                                      N/A                 RhodopseudomonaspalustrisTIE1MKSNVIPFKNPHGRTMPTADPAMNRAKAFANYYGDERRRGVDPETAHRNASKLIMADFDRLIATLRTTMNDVR
complement(3294722..3294838)       hypothetical protein; Rpal_3041                                                      N/A                 RhodopseudomonaspalustrisTIE1MKSALKRAGLIALTISGVALWLWLAIPAIAGLFGVTSW
complement(3294854..3295150)       hypothetical protein; Rpal_3042                                                      N/A                 RhodopseudomonaspalustrisTIE1MPTDQFTNPADFLILSDGSVSLRNVMRAAHQKARRRAAEYAEWSARQDPRDQLAVPYSQFFAEAIRWAWDRVRITRNLIRERGWHWYQPESVALPLAA
complement(3295280..3295378)       hypothetical protein; Rpal_3043                                                      N/A                 RhodopseudomonaspalustrisTIE1MMSRGRMTLLCMALIALVVAFLEIFGPVHLRH
complement(3295393..3296187)       PHAGE_Brucel_BiPBO1_NC_031264: hypothetical protein; Rpal_3044; phage(gi100068)      1.11e-23            RhodopseudomonaspalustrisTIE1MRASDNICYRNASTKVIETSNNCGYIFSCMEPGNIIRQAREQKGWSQKDLADRVGISQPAIRKIEGGSTVKSKHLPKIAQVLGLDLQHLDESLDQLTNVESQAFSSTGDVNHHRPASGILEIDVRAGMGGGGSVEGREVVHNGRYSDPVKEEAWHFPARFLREELRAPESRVQILETQGDSMAPTILSGDRVIIDTGHRLPSPDGIYAIRDRFGAIVVKRLQVLRRGEPPTIRVISDNKAHDSEDVGADEIHIVGRVLWGLKRL
3296316..3296417                   hypothetical protein; Rpal_3045                                                      N/A                 RhodopseudomonaspalustrisTIE1MALAIERGLNRRVTREQLCPEFFDELVTSESAA
3296414..3296788                   hypothetical protein; Rpal_3046                                                      N/A                 RhodopseudomonaspalustrisTIE1MTTYPNSDYPAEGDPVGQRWGRFPERLPGASVGFASVDGRREDIASLQGNQPPHLFKPLACGVQNERISSAMRASVSARSPLERGDPLQAAFDVFAVLFLLCFGALLLCAVGFAFFIWPFLVLL
3296936..3297316                   hypothetical protein; Rpal_3047                                                      N/A                 RhodopseudomonaspalustrisTIE1MREEIAELAGPRTWGDTRQSWLSRVPRAVKRVLGTTGETVSYRAIKSLWYGEITDPEHHAARDVRRAAQIVRAQKSASELASHFENLIGGVNAADGANLYRDEIARLERVVSLLRGQSSAGDCSGI
3297346..3298215                   PHAGE_Aurant_AmM_1_NC_027334: DnaA C-terminal domain containing protein; Rpal_3048; phage(gi849119914)     1.26e-05            RhodopseudomonaspalustrisTIE1MLTETQLKAAERRKRFHESIAARAAALAPAVAAAAPTIDAPAVVPAALLPASASPARVNLSEARQAVMVEPRSLYAREIVSVVANYFGPTVGELRGSRRAATLIIPRHVAMYLVSDTCPHLSLPAIGSFFGGRDHTTILYAVRKVEKLQKDGGKLAAAIAELRAKIAELAVLPVEVRGGDENDEDARPVAYPSIERVQRVVARFYHLTVDDLTGKRRERHVRHARAVAIYLCRMLTDYCNSAISEKFGARRHYATVPSYVDAVSIQLGESSRLAADIRSLTDLIKSGGG
3305767..3305779                   attR                                                                                 N/A                 ACGGCGCCGTTCG

#### region 4 ####
3593599..3593637                   attL                                                                                 N/A                 GCTTGACGCGGCGTCCTGCGCGGTGTGGCTCGCACCCAC
complement(3600241..3602790)       PHAGE_Entero_CAjan_NC_028776: tail fiber protein; Rpal_3342; phage(gi971742357)      1.41e-10            RhodopseudomonaspalustrisTIE1MAIFTAIFGAVASAIGLTGFFATAFVAVGVLATTVGISYLLRKKPEQAAQAAESHFSAQGQLQASGDVPRSFIVGYSFTAGSLVYANEWGNDGDTPNAYHVQVIALSDLPSGPLREVWVNGEQCTLLSGEAHGEFGVPLAQYRKDGKDHLWVKYYNGRQTAADPYLVNRVSSADYPYEATRVGFGVAYVICTALVEDTLFAGFPTYKFVPGSIPLYDPSKDTTAGGDGPQRWSDRSTWGGDGDDLPVVQAYNILRGISYGGTWFYGAQRMSAARLPITNWLVQIAKCRNGVEGENGIEPAYRSGGQISVDQAPLDIITKLNTTCQGRLTEVGGFYKYHAGAPDSPSFSWTDVDLLSTEEHMSRPFFSLDKSTNGIQARYPDPAQGWSVVTAPAYHRPDLEARDGGRRLMATPLLDFAPYPAQVQRLQKSAIDEARRARTHELAFPPVFWLVEPGDVGQWTSTRNGYSSKLFRVDQMVDHANLDVTMAVTEVDPGDYDWDHETDYQGVAIGPTTFVRPAPQGTLSWLVEPYVERDTSGLERRPCIRLAWDGTLAGISGVAYRVREAESEDIVVSNQTPFYAEGAIIIRGLLPATDYEVEARLIPTAPRDMVPSDWMPVTTPDVRLTMEDLVAGIQHVIATLKQEREEITAIRADLSNMIATVAARGVVDKYLLHQETADSRASVEVVSQALATLDEAFASYQTEVTAELGTVSASVTTNSSAIARLDGYAAARWSVTTNVNGAISGIELINGGQSLSQIIFQADKFKFQLPGYANGAPQDFLVVGQVGGVPTWGLAGNMVLDGTFTARMFNVAQLSAITADLGHVTSGYQQSPDGKMIADWNNGRMEWWD
complement(3602792..3603265)       PHAGE_Roseob_SIO1_NC_002519: gp26.2; Rpal_3343; phage(gi9964635)                     3.22e-13            RhodopseudomonaspalustrisTIE1MSIVRLAIDTDKDQAVALLHASHLGAGFDRADGPTGFVVPFEPAYAERLFLMHVRSPRMICLAADDRDGVTRGVLLAAAYEHRFGPVWIASETAWWIDPAHRGGSAAPRMLDAYEDWARRQGCVFAGMAGMGGDPQVAKLYLRRGYQTAETHFLKAL
complement(3603265..3603915)       PHAGE_Paraco_Shpa_NC_041868: hypothetical protein; Rpal_3344; phage(gi100017)        1.28e-12            RhodopseudomonaspalustrisTIE1MTRSLSEQAYNALRAHSLVSRDFLWLQVRTIADGSPVYDGMWSDIGPFDAQVIDPDTGGIVTRTYIGSSTLVKISDIALVSDLTVQTVTIELAQCSGRVNDLLRSYDAKQGVVQIHRGLFDEVSREQAGPAIPRFYGFIDLVEIPTVKENEFGTVKLTCTSHTQELTRSSSDTRSDASQRLREATDNFYQDVATVGDRQHFWGRANGTVGGGSGGK
complement(3603912..3604535)       PHAGE_Paraco_Shpa_NC_041868: hypothetical protein; Rpal_3345; phage(gi100016)        1.47e-15            RhodopseudomonaspalustrisTIE1MISFPRVDLLANVGFTGDPLVLVSRQEMSRTADGISIGKDLGSAIWLASFVTEPLRNALALELEADLDTLDGVINPFEAYDLRRPGPRAYPDGSANDGVLSAVNANNKAIALTGLKAGQIISKGDYLSFDFGGRRALHRVSERVVANSAGVTAQFEVRPHLRPGWTLGIAVNLRAPRGVFNLAPGSVKPKTYNGTQTVISFQAVQIP
complement(3604532..3606580)       conserved hypothetical protein; Rpal_3346                                            N/A                 RhodopseudomonaspalustrisTIE1MRVSLVIDGDSNGAVEAATDASKAVTDLGTTATDTAKGLEDGFKKASGAAGSMKGSAEAAGAANDNLLASTSALLSKFGELASKAKGSNDALALNASTASSLTASLGALSRSVGVVGFLTGAIGLATAALSAYNELSARASREIDRQLTEQARLINVVRGAYQNAKTAAGDFYEQSKDVTLLQLRQNQVDLQRTLQTQVGSFIGGVTSFGDSLGNYFNNVKTIRGELLPFEDAIFRLNDGFKQGKPDVEGFVNEIARIALLDPSLQKAASDLITKINEASKTARALKDLSSGEKVIEGKDKPEDRKRVGITDQVSDTAGQFERLAKSMDRQAASAEAEASATGKSAGEIAKLRVEAVLTEAAQQAGGGTAEKYAERIKQIGDRAGEAAQKLALARVQSDAAFQRQTLGLSADDAQIAEQLRGAYGDNVQRALSSADAAALKFNQDMLQLKNTTLDVSKGVFTDFRTSIQQGATAMEALGNAGVNAIGRIADKIASTQLDNLVSGLFGAFTGGSGGGLLSSLFGGGSKGSFATDGIGGFGPTFTAADGGTFGPGWGVVGERGAEIIKVHAGGVTVFPHHVSKPYLPGFADGGSLDQLGNIARLPSFQSSSSGGSAGSAAPQEFRLSVSVDDDGKLKTVVTDVAKGIAQEVSAGTVKDFVRSPQFTDHVARAYGDAKAAWKIRS
complement(3606583..3606924)       PHAGE_Rhodob_RC1_NC_020839: hypothetical protein; Rpal_3347; phage(gi472339676)      2.95e-10            RhodopseudomonaspalustrisTIE1MDAESIAELTEALAAPALIEPADYAGVWPEHADTVRAFLAVASQWRTTAIGGGGFATMGGGAAAPLRLVYVSLDYTAVRAGLDAEQIAITPALWRGLRIMEAAACAALNESNS
complement(3607017..3607346)       PHAGE_Rhodob_RC1_NC_020839: hypothetical protein; Rpal_3348; phage(gi472339677)      3.02e-17            RhodopseudomonaspalustrisTIE1MFKIVPNPTFTHDVTVLTPVDGGHDEETLVVTYNYLDTEEVKKFDLNTSNGTTQFLDSLVAKIDGLTGPTGEPIACSFDLRQKLLKMSNVRLAVIRHYFDAVRKVKEGN
complement(3607359..3608300)       PHAGE_Rhodob_RC1_NC_020839: hypothetical protein; Rpal_3349; phage(gi472339678)      1.62e-82            RhodopseudomonaspalustrisTIE1MFDSVFFRKMVLLAKLESDYATDPTLTGAANAILGTDIALRPMEGQDVARNLIRDYLSGEATIPAGLHVIIEFSTELAGSGTPGTAPAWGPLMRGCGCAEVIVANTSVAYTPISEDMESLYVKFWLGDTLHALKGARGDATISLDAQGIPRIRWTFTGLWVAPTEVSRPATTLTGFKKPKIAAAANTPTFELNSVALALRSWSLKLGNKVEPRLLVNVEKIIITDRAEALDCTVEVTPLTDFDPFALAAAQTLIPAEIVHGTVAGNIATIAAPTCQLKRPGAATNNQGIAERVLSLTPLPSGTGNDQFSLTLT
complement(3608303..3608473)       hypothetical protein; Rpal_3350                                                      N/A                 RhodopseudomonaspalustrisTIE1MKHPHKGGSYRREPDGSLTRLADELIKGADEFAVANTPDDKQPADTKPARKAKTEK
complement(3608470..3608916)       PHAGE_Rhodob_RC1_NC_020839: hypothetical protein; Rpal_3351; phage(gi472339679)      1.99e-21            RhodopseudomonaspalustrisTIE1MSLIVDVKERLETEVPALTGKLDYVAELAALTDAGAPPQREVSAFVIPLGEDDQGGGGSMAAGLHTQMIGETVGVILCVKALGDAKARKALPTIDDLSNAVTAALAGWGPEDASGVLMFRRGRLVSVTKGLVVYQLEYTLLDQLRIAR
complement(3608913..3609473)       PHAGE_Rhodob_RcapMu_NC_016165: virion morphogenesis protein; Rpal_3352; phage(gi356870876)     2.36e-26            RhodopseudomonaspalustrisTIE1MTGALIRISLKDADNALAPLAGYIARANDKLGLFENIGASVTTSTQHRFETSKAPDGSPWPPSLRVKKHGGFTLRLTARLMRSITYQASSDNVEIGTNVVYAAIHQFGGPINKAARTAVLHFKTNSKTGQSRFAKPNKADRARKAEIGAHTITMPVRAFLGLDDDDEREILSIAEQWLAGENGAAA
complement(3609473..3609901)       PHAGE_Rhodob_RC1_NC_020839: hypothetical protein; Rpal_3353; phage(gi472339680)      1.88e-42            RhodopseudomonaspalustrisTIE1MTYASQADLVDRFGSAMLVDLTDRAEVATGAIDAGVIARALADTDAAIDGYLKGRYALPLSTTPPLLRDIAIAIAIYKLHRDAVGEKIRQDYVDAEKKLLLIAGGSIRLDVAGAEPEASGTNGVRVTDRERPLTAESLKGYI
complement(3609906..3610232)       hypothetical protein; Rpal_3354                                                      N/A                 RhodopseudomonaspalustrisTIE1MANQTPFKIDDDSYREGQEAFKRGATLRSIVEQLATFGIDELEDRKTFSGVLGFGDALLDHLRNPAVVVASGEPVRYSDGFVSSIRTTAFPQTTPARASCGTPPKPTR
complement(3610347..3610423)       tRNA                                                                                 N/A                 GGCGGGATAGCGCAGCCCGGTAGCGCGGCGGGCTCATAACCCGCAGGTCGGTGGTTCAAATCCACCTCCCGCAACCA
complement(3610414..3610875)       hypothetical protein; Rpal_3355                                                      N/A                 RhodopseudomonaspalustrisTIE1MASKPKPKPKPEKPAEVADNSTPRTADQDHDQPAADAAAAADQAAAPAAGSVAEPAATTVTKANESFFVTTAVADQVAGVVVTQKIPTVDLVGELTKVVIVKSKSDRGRRRAGFAFTREETRIPLADLSDDQLVALVADTELIVETVDEVTAG
complement(3610887..3611777)       PHAGE_Rhodob_RC1_NC_020839: major head subunit; Rpal_3356; phage(gi472339682)        5.11e-149           RhodopseudomonaspalustrisTIE1MIVNSANLNNLRVGFKTSFQGGLGLAPSQYLRVTTVVPAATKEQKYGWLGKMPGVREWIGPRVVQNLSEHDYSIKEKPLELTIGVDRDDIETDNLGIYSTLFTQMGESTGSAWEEMAWAQLKAGFSKPCYDGQSFFDTDHPVLDESGVAQSVANTDGGSGAPWFLLCTKRTLKPIILQKRKDFEFVAKDKLDDDTVFNNRQFTYGADARGNTGFGFWQFAWGSKQTLDPTHYEAARVALTGMKGDYGKPLGIVPDLLVVGSSNEGAGRAILQSQLINGGESNKWAGTAELLVVPWL
complement(3611830..3612606)       PHAGE_Rhodob_RC1_NC_020839: hypothetical protein; Rpal_3357; phage(gi472339683)      1.46e-43            RhodopseudomonaspalustrisTIE1MTALTADRNTPRLEGEMKQGPVAAAVKIFAGAMVMRDAAGNITKGQTALGLRGCGRAEEQVDNSTGSAGDKTINYRGGAYRFANSASADEITRADVGKFCYAVDDQTVAKTSGSGTRSIAGIVAHVSSLGVVVCFDEDDLATFLATRRVAVPLRVATLVGTNVYRTLSTFAGRIVKIWSITEGVLTTGDATLTAKINGTAVTGGVITITQSGSAAGDKDSATPTAANVTAVGDELSLTVGGTNATATAANAIFEIELD
complement(3612762..3613868)       PHAGE_Rhodob_RC1_NC_020839: I protein; Rpal_3358; phage(gi472339684)                 2.54e-97            RhodopseudomonaspalustrisTIE1MSGHQSKPVLNVARGVGQPIALNADGSAPEWIMLIPAGDGGVIHTVDGRGPYRVADPAALAAQSLAAVGGRAPLDENHATDLAAPNGEPSPARGWIVGAEARDGAIWGRIDWNASGAALMADRAYRFISPVFTHDKAGNVLTLLRASLTNVPNLRGMAALHQQENAMDLLAQLRALLGLDDTADEAAVIAKIKDLKGGGDATAMNAAVSKALNAALSPIAAVVGLAADADAQAIAQAVSKAAAPEGNPIVKSLQSELATVTTKLNDLLGSAAKEKATAFVDGAIRDLRVGVKPLREHYIARHMADPAAVEKEINSFPKLGESGQTLLPTDPPKDGQVSLNAEQLTAAKVLGIKPEDYAKTLAAERAAS
complement(3614253..3614708)       hypothetical protein; Rpal_3359                                                      N/A                 RhodopseudomonaspalustrisTIE1MRRTKFVIAFVVAMTASTASSAFSVFQSSTSGKMIAACEASLKRRLLDPSSYRRIEAAAEVNEISLDEYFKRSNHAPATQELMRRVGNKASRVTAILDYNARTAAGLTTRNVVKCTYETTGEIGEISEHAVEIDGKSFTSWLVDRASRSSR
complement(3614723..3615367)       putative phage repressor; Rpal_3360                                                  N/A                 RhodopseudomonaspalustrisTIE1MKALIRAILDARDWTQADLAARLRTTQVTVSRWLDGTEPRGPMRDRLRDLAEESGLVPQARANHVIKIMGRVGAGAIIDPDYEQTPEDGLEQIELPYPIGSDLIGFEVSGTSMMPKYDPGEILVVQREQPVSFDSMIGQYAVVRTDDGRRLVKRVMPGPKSNLYNLESANAETIVGARLVWGSPVQMAIPNVQLRRIAMKSSRSSKAARSKKSS
3615468..3615728                   hypothetical protein; Rpal_3361                                                      N/A                 RhodopseudomonaspalustrisTIE1MIKVRDIRTKVFKVTQAEMAGIAGVQQPTISRWESSTSRVPAVALAKIREEAKARGLRWDDRWAFGGAVQTGAKQRQPRKKNRVRP
3615725..3615997                   hypothetical protein; Rpal_3362                                                      N/A                 RhodopseudomonaspalustrisTIE1MTNAAQPAPEKFAVARMIGGRPRFFLGFAEQTAAHGFARVLITPEPDKAREYDSRVIAELMVDFLDFLDSAGAGERRRNWIVMPLPEEWL
3615994..3616449                   PHAGE_Rhodob_RcapMu_NC_016165: conserved transposable prophage protein; Rpal_3363; phage(gi356870852)     1.93e-11            RhodopseudomonaspalustrisTIE1MSRRRASDTASSDIYQPRPVVERFSAERVRASSCAARIKQALKETLRECGRSREQIAAEISAYLGETVSPQILDQYTSGANEKSNIPAHRLVAVFAVTGDIRLLNALLEDTAAIAVPSRYEALLHIEQMRELRDRLNQEIESADAEWRAAQ
3616446..3616775                   hypothetical protein; Rpal_3364                                                      N/A                 RhodopseudomonaspalustrisTIE1MNAPSVIGWRLQPLQGVTAKIIVADDGRNIGVLYASEINPQSAKDGALVAAAPKLQAALAELTTALDEALSAIDVAGSMWAERINIARAAADAALAESAFDRAAKAGPV
3616795..3618951                   PHAGE_Rhodob_RC1_NC_020839: integrase; Rpal_3365; phage(gi472339716)                 3.56e-131           RhodopseudomonaspalustrisTIE1MKDYLSAAEIAALALPGLPASKRGVAFAAERAGWEKRQRSGKGGGLEYAVTSLPPQARIAYLGHHTSEIELPASLAREAATEPGAEQLGAPAAEARDARLALLALADSIASQAEIGRKRADVYFCDCYNAGQIEVAGWIKSEIKHLAPRTLARWRSFAKAGQKTKLAVDRARARRGTGVLDRANGGEVKAFILALLIRQPKLSADDIAKNVADYFGTLQIGDRRIPVPPVRTFQNTLKAWKLRHGVELKAICDPDGFRSTTRMAARVAMPAHRLNEVWQIDASPADVLLLDGRHTIYVGIDVYSRRLIATVSKTPRAAAVGLLIRKAIISWGVPERIKTDNGSDFVARTTQRLFAALGIEHELAPPFQPEKKGHVERAIGTLQHGLMRSLDGFIGHSVADRKVIENRRGFAKRLGQKEEDVFEVALTAADLQHRLDAWCNDVYANKPHAGLKGRTPFEVAAMSSTTIRRIDDLRALDMLLAPVAGKDGLRVVTKTGLRIHDTHYNAGFLGLHVHRTVLVRMDEADMGRAYVFEQDGETYLGEAIAPELLGIDPAAAARAVRAEQKRLVDESMAAANKLRRAVKAIDLAGAIHRQALKDAGTLVEFPKPVTSHDTPALAAARNVAAGETSAHSDAVAAMAERMRAEDAANSAASNVQPLHSQEPKWLRWNRAREIEARMRADEFVEPDDLLWLGSYRQGTEYRGFLLTFGTEEEAAASV
3618984..3619421                   hypothetical protein; Rpal_3366                                                      N/A                 RhodopseudomonaspalustrisTIE1MSITNEHSQQKDLDAWILDSAEIRLADGCHAVCILVDQRTGRTLTTVNDPDAVEDDFETLVLIASADWSETSASPYPPIVMDNSRVHARLSALGLALQMTSPHQGARRSLAERRLNALLLGVDVSITTSDELREILRRRGSEIAV
3619450..3620244                   PHAGE_Rhodob_RC1_NC_020839: hypothetical protein; Rpal_3367; phage(gi472339715)      2.83e-39            RhodopseudomonaspalustrisTIE1MSKDTTIHRGPIALSNVASFMVLTLRLVERAPNRPGFGVYSGFPGLGKSCSSIVAQNKTRAVRVEVGDSWTRRTLLTKIITEFGEKPPSKRASIADLAQQAIRLMGEDPRRPLFVDEADKLVDKGIIEILRELQETSTAPVILIGEENLPTKLAAFDRIYDRVLVWEQAQHCTASDVRELARAYWPKLKFSDELLETIRVKSAGRVRRILNNFDEAAHIASNRNLTSLGVEDWGTAEYHTGRPSKKVRDASKFDSQVAIPTRTA
3620241..3620621                   PHAGE_Rhodob_RC1_NC_020839: hypothetical protein; Rpal_3368; phage(gi472339714)      4.94e-08            RhodopseudomonaspalustrisTIE1MMPIRDRQAVRLRIRVPETAPTRCAEQHLWTAMRTLHQFTLEDIVYHATTDEVIIDKAQAARYLCRLREAGILHRRRDPVAGGETWLLKPAANSGPKPPRIVRVSLVWDDNSRIPVGDPQITEERV
3620618..3621013                   PHAGE_Rhodob_RC1_NC_020839: hypothetical protein; Rpal_3369; phage(gi472339713)      2.68e-24            RhodopseudomonaspalustrisTIE1MSASGNDYLAKARAAWGNELPDWIEELAKEANRITARSIAKRLGYSNATISYVISRSYKGNLKRVEETVRGALMGVTVDCPIVGEIGRDRCLEEQKMGNTGASPNRARLYHSCRSGRCPHSRLNQESDHAE
3621003..3621290                   hypothetical protein; Rpal_3370                                                      N/A                 RhodopseudomonaspalustrisTIE1MLSNDLRDLYRQFNSWISGDGEAFTVDAARDFERRLKHGAAKAALLELGVDPRVFDTDVPFEKIVPIEASAPSAQLLTFPVDRVVRLPQIGGDAR
3621287..3621640                   hypothetical protein; Rpal_3371                                                      N/A                 RhodopseudomonaspalustrisTIE1MTASASHLDRPSFADQVAAVEAIEVAQRVIALGTRRAALGVSTVETVAMAHRLIALETLAALTFDMLAQCQSAADVDPAQRDQLRLVTIQHIGDVGAQLEALGYVTGPSTTEASTEN
3621642..3622190                   PHAGE_Entero_SfMu_NC_027382: host nuclease inhibitor protein; Rpal_3372; phage(gi849255240)     1.70e-29            RhodopseudomonaspalustrisTIE1MALKTKSVACPVPQSRDEAGKAVAEFAAIDRQLAEIEIEMNKFIAEVKETFFARAAPLRLKADAIAGAVQAYCEANRSDLTNSGKKKTVDFGVGKVSWRNQPSKVTFSGKEDDLIDFIRRSNDVELSDMLRATFEVNRVFALSRPDLVAKVPGIEITEGGESFEIKPDKTALPDSSVAEAAE
3622187..3622582                   PHAGE_Entero_mEp390_NC_019721: hypothetical protein; Rpal_3373; phage(gi428782707)     2.04e-07            RhodopseudomonaspalustrisTIE1MTAAQYGLTPRQRDCLDAIVNHQTAHGSAPSYEELCAALALKSRGGVMRYLDALEERGYIQRRPNTKRSISVIAGRDVRPRPQYELPAEVDANLRRFCAANGETDPAAVIADAVTLYIDQAEHDRRVEAAR
3622579..3623076                   PHAGE_Aurant_AmM_1_NC_027334: DnaA C-terminal domain containing protein; Rpal_3374; phage(gi849119914)     2.32e-07            RhodopseudomonaspalustrisTIE1MTTSLDQACRLARTVRKTPPAAPAVRIAITGGDDAALPVEIVRCASAVVRITADFRRIERPLTVRGVTAIRAIQLACASYFDVAPIEMRSARRSVKVARARQVAMYLAKTMTPFSCPQIGRQFGGRDHTTVLHAVRRVTALMQQDAAFAADVGTISRWFAQGALA
3623073..3623774                   PHAGE_Rhodob_RC1_NC_020839: hypothetical protein; Rpal_3375; phage(gi472339703)      1.20e-25            RhodopseudomonaspalustrisTIE1MKLSTKPATTSMIATIHTLKGRLKMEDDTYRDLLEQQAQKRSAKDLSVTEAGRVIDRLRELAGDGGIKGAVAGLDSAIGGKLRALWIAGYDLGIVRDRTDRAMLSYLERQTGVSHVRFLADAGVANKAIEGLKRWMARDAKVEWPTDSSDVRGAKRAILAAQWLRLIELRDVIPSIAHHPLRDLDLYAWRLVGMNGWNFFDLCHFDQVQNALGRKLRAALAKHGQHATTNQET
3623776..3624174                   hypothetical protein; Rpal_3376                                                      N/A                 RhodopseudomonaspalustrisTIE1MAFEEIEFVKTSKINPDGLPVSVSLTKRASAKIPSLHIGLTQAFLAQIPFDTADRFKLLVGNGDDAGVIRLVRVEGGPLQITASAGLGARIHCGKTDRFGSEAQDKVFCAAEVIDGNAIEIVLPDWAIAAED
3624178..3624759                   PHAGE_Caulob_karma_NC_019410: putative GcrA-like cell cycle regulator; Rpal_3377; phage(gi414089462)     1.11e-10            RhodopseudomonaspalustrisTIE1MTAASANQKPTMPTDAELARARAERGWTDHRVQVLHRLWLCGIAGGAIASQLGGGVTRNAVMSKINSTLGPGARAAGVVETQRAAKTATPRRPRNEAVIRTRGPAQSKNAEQRAAARAAAPSIDDEQIPTNQRAQLMDLDASRCHWPIGDPLKPDFFYCGGKAWSGLPYCAGHARVAYQPAGDRRREAPRGRR
3624746..3624925                   hypothetical protein; Rpal_3378                                                      N/A                 RhodopseudomonaspalustrisTIE1MAGADEQMKKLLKELKPLTAYERHLRIVALAEQYGSGFAWAVKKEFEKLNQRKSDGASR
3624922..3625134                   PHAGE_Pseudo_JBD44_NC_030929: hypothetical protein; Rpal_3379; phage(gi100055)       3.69e-19            RhodopseudomonaspalustrisTIE1MSMDYIRGYYKVPAKRGGRVEYFGGKALRRGTITGARGHRILIRLDGDDFPTVFHPTWKIRYLSVEEAKA
3625131..3625370                   PHAGE_Rhodob_RC1_NC_020839: hypothetical protein; Rpal_3380; phage(gi472339701)      2.61e-07            RhodopseudomonaspalustrisTIE1MTSGAAPLLKVSDHALLRVLQRVGGFEIEALRASIAADLLRAAAATEQVGVRDFVVLRDGFPYVVADGVLVTVTEAPRR
3625367..3625762                   PHAGE_Rhizob_RR1_B_NC_021557: hypothetical protein; Rpal_3381; phage(gi514231154)     1.47e-13            RhodopseudomonaspalustrisTIE1MTRELPGVLAEIAEVAGETAALKISALHGGQRVYFPSRPQGDDHWLVAAVGAEAAAKLAARFGGSTIDIPLHVGGTYRRFVRQIAERIHALDGDDLSSREIAGKLGLTQRTVHRHRSRHRGKPDNGQGSLF
3625869..3626783                   PHAGE_Agroba_7_7_1_NC_019519: hypothetical protein; Rpal_3382; phage(gi435844350)     7.35e-60            RhodopseudomonaspalustrisTIE1MESRFNKCLAVELRYEGGYTNHPRDPGGVTLEGVIQRVYDGYRKRKGKPRRRLTASMRGTPEWITERDEIYRLQYWNQIRGDELPAGVDLFLFDSAVNSGPYQAVKWLQRSLKLNLVDGHLGEGTMAALMAHPDHDALIADMAARRLGMLQHLSTWDAFGGGWSARVASCKKIAQSWAMGSVGPAPEPVHLMSGDAKAYASDVAQPALDAGDAVKGGLGSGTVAVAIDSAKGSLAPLVGTSDLINHLFTALTLLSVVIAIGALAYSLWSSRKSKIAQRAIDGDIVGDVPTPAGVPGMPWSQVSA
3626780..3627328                   hypothetical protein; Rpal_3383                                                      N/A                 RhodopseudomonaspalustrisTIE1MITRFAHDVGELFGDVTAELFWSAATSVPSLLLLGAVAVAALTIAYLPIVARLWPAVEVYQRISGIVAVVAAAVLMFLVGFAYADQRAEVERLKDALTFKEFQLKSAADTAADAEQLRRAAEAETRKAKGQLDDYCKKFGCGDDRKPPAPEMGVRVVRRCDPPPGYVEWLRQLQRRPAAGQR
3627276..3627518                   hypothetical protein; Rpal_3384                                                      N/A                 RhodopseudomonaspalustrisTIE1MSSGCASSSGGPPPASANGVYVPRDCESLARNVDDPVVGPRSDPWRVIGEYAVALGELNGNIDATRQCQAGQRERLGQGK
3627521..3627901                   PHAGE_Rhodob_RC1_NC_020839: hypothetical protein; Rpal_3385; phage(gi472339696)      1.09e-07            RhodopseudomonaspalustrisTIE1MTINVSDLAPWVAIAISAAALWYAIYSGRSKVTEEKFKELSSWIETKASKDHVAVLAAKLDVVEDKVTVIDNELKHLPDNQTVQKLEGMIGTLSRDVSVLSERIRPVAAIADRLQEKIMESVEIAR
3627898..3628194                   PHAGE_Rhodob_RC1_NC_020839: hypothetical protein; Rpal_3386; phage(gi472339695)      2.53e-23            RhodopseudomonaspalustrisTIE1MSRDIIREEARLIMLRELHGQTNYALNDALLRDVLESFGIAKTREWVREEIGYLENVGAVTRTSAGSVVVAKLTPKGVEHVERRLVIEGVKRPSPAEA
3628199..3628819                   PHAGE_Rhodob_RC1_NC_020839: hypothetical protein; Rpal_3387; phage(gi472339694)      2.70e-40            RhodopseudomonaspalustrisTIE1MKAARHKRGRLSEIDKLPEWADEAKLWAFEQLKERKLTQLEILDGFNGRLKVAAFEQGITDPPVISRSAFNRTAIRIAILSRRLEETREIAAVIAPKLDEAGDNSLTLMVAETLKTLISEMLGNAGELTADGATAEMLMMTARALAAAEQAKRISADGRRKIEAELNAKASKAVDQVAKAKGLTTETVDAIKAKILGIDTSKGAKP
3628816..3629028                   hypothetical protein; Rpal_3388                                                      N/A                 RhodopseudomonaspalustrisTIE1MKLWILVVYLAGSSGTVNNGGPATAEFVTREACEAAGAAIAEKWPGGTLWKPKYNGHLCVHASSPTAAAQ
3629051..3629548                   PHAGE_Rhizob_RR1_A_NC_021560: hypothetical protein; Rpal_3389; phage(gi514231507)     2.14e-51            RhodopseudomonaspalustrisTIE1MNDLPELAISVRQPWAWAIIHAGKDVENRSHGMVRHLSPVVGPRAIHAAKGMTRDEYELAASFMRSIGVACPPPADLLRGGIIGAVEVTKRISKRDPCESASRWFFGPAGLVLTNPKPCEFVPSVGALGYFKWKPADASIVPPPARWMLPEAKPAEPPPNLFGAA
3629545..3629889                   PHAGE_Sinorh_PBC5_NC_003324: hypothetical protein; Rpal_3390; phage(gi18071287)      3.54e-08            RhodopseudomonaspalustrisTIE1MTAARTGRTPCINPRCRRTFDAAKYGSGEMICGKCFRSLPQPIRDNHRRLWRHLQKWRRAEARTTDEFKRSRVASIVDAYSSQINLHWDQVLRPAIVTPERPVGLDGFLAEVGL
3629886..3631520                   PHAGE_Rhodob_RC1_NC_020839: hypothetical protein; Rpal_3391; phage(gi472339692)      1.62e-156           RhodopseudomonaspalustrisTIE1MTDPRAISEADWAEARRAGMASAARIFADRGSIEDVLIGYQKRLLASTALHQVTLCEKSRRIGATWAVAADAVLTSAATKAAGGMDTFYIGYNLDMAREFIDTCAMWARSFNEAAPVVNEFMFDDGNPDRAIKAFRIAFASGFEIVALASRPRSLRGRQGYVIIDEAAFHDDLAGVMKAAIALLMWGGKVLVISTHLGAENAFAKLIDDARGGRNPYHVERFTFDDALNDGLYQRICLVTGKEWTPEGEAKWRAGIIASYGEDADEELFCVPSKGGGVYFPRPLIEARMLPDLPVVRLERNSAFTFLPKEQREADIEAWCEEHLKPLLDALDPERQHGFGQDFARTLDLSVIAPIAIGKTLKRTVPFSVEMRNIPFEQQRQVLFYVCDRLPRFVGGKMDASGNGAYLAEVAAQRYGQLRVEQVKLTAEWYLDNFQPLKTAFEDGMIAIPQHADLIDDLGIVRKERGIPRIPDIRTKAADGSGKRHGDFAIALVLAYAQTRSKLVEFGYRGAGDSAASGDGPPDDQDDARDWWRQPLGAGLRGGL
3631517..3631744                   hypothetical protein; Rpal_3392                                                      N/A                 RhodopseudomonaspalustrisTIE1MKKPVRKTVKSAPAKRTKLDKAAVDICQTVYGRSGSCVCAGSKKPVCTNMLAAARKAARVFVGDEIIDAVIKEPA
3631744..3633375                   PHAGE_Rhodob_RC1_NC_020839: hypothetical protein; Rpal_3393; phage(gi472339690)      0.0                 RhodopseudomonaspalustrisTIE1MADAPIIYGPDGQPIRREVLTASVAGPTVTGVRSPFGAYPADGLNPRRLASILREADQGDPISYFELAEQIEERDPHYLGVLSTRKRSVSQLDITVESADDTPEGKSIADMVEAWLRRDELQFELFDILDAIGKGWSQTEIIWDTSEGQWQPKRLEWRDPRWFRPDQRDGVTPLLRIDAGDAFAQGLPPAGPNGGGYAPLPPFKFISAVIRAKSGLPVRSGLARLACWSWMFKAFTQRDWAVFTQTFGQPVRVGKYPAGSSEKDKDTLFRAVANIAGDCAAIIPESMLIEFIESANVGSSHQLYKERADWLDQQMSKAVLGQTATTDAIAGGHAVGQEHRQVQEDIETADAKALAAIINRDLVQSWVQLEHGPQKVYPRLRIGRPESKNVTQILDGISRGVPMGMAVEKSYMNDLLGIPVPSPGADGRMPELLTPSASASPFGSMFPSASPQQRALAAAEMIMHDVRDPIAVLSDQAARLCAPGSDALVDEVRGVIETSTSLQQVQEKLRALKPGAAEAQMAGLMRMARVIANLTGRASIPDA
3633368..3634132                   PHAGE_Pseudo_JBD25_NC_027992: membrane-associated initiation of head vertex; Rpal_3394; phage(gi100034)     4.39e-75            RhodopseudomonaspalustrisTIE1MLKGFGTATACSCCGGVTTALQAKVVPFSVAPKEAIDFLRRKVDVPTATWTDLWQAEHSVAFTVAGAQTDALVKDFHEAVQRAIDDGLTIEDFRKDFDRIVENHGSDYNGSRGWRSRVIFDTNVSTAYAAGRWEQIQRVKRTRPYLRYVHLEGQAHPRPQHAAWHGLVLPVDDPWWDTHYPPNGWFCHCTVMSVSDSDLSRYGWSVADQAPQTIMVQRQVRQSDGSIRTIDVPDGVDPGFAYRPGEMPDAFGED
3634551..3634589                   attR                                                                                 N/A                 GCTTGACGCGGCGTCCTGCGCGGTGTGGCTCGCACCCAC
complement(3634966..3635310)       5-carboxymethyl-2-hydroxymuconate isomerase; Rpal_3395                               N/A                 RhodopseudomonaspalustrisTIE1MPHLVMDYSADHLSRDRIGRMIEQLAVTAAATGVMQAADIKVRARGFDDYLVAGKRDSFVHLAVFMLAGRTPEQKVSLSVALRQTLVDHCPDITSLSVDIRDMDPEAYKKRLKP
3635504..3636349                   PHAGE_Mycoba_Gaia_NC_026590: hydrolase; Rpal_3396; phage(gi764160151)                1.74e-05            RhodopseudomonaspalustrisTIE1MTTDRPADPRARWAYLSQSERDAAYDVVTAVKNSAELSAERNAASAIARATLRSELDLAYGPRHNAKIDLYPAARPEAPCLVFWHGGYWQKNSRELFAALVAGIAAHGWSVAIAGYSLAPEVTLTDIVAESRAALDWLAAHGPEHGIAGPVVTSGWSAGGHLVAMTLDHPVVAAGLSIAGVFELGPLRDTFLNAALRLTDTEIATLSPLRLPPVAKRLDLAYGTNELPALVLDSLDLHARRAAVGAPGRLLPLAGHDHFSILAELRRPDGALVQAARELIG

#### region 5 ####
4268318..4269514                   PHAGE_Klebsi_phiKO2_NC_005857: putative portal protein; Rpal_3975; phage(gi46402090)     1.20e-44            RhodopseudomonaspalustrisTIE1MTIASRVQSWFGLEKKAGIAAPEPWLFELFGAQASGSSIRVTPRIAMECAPVACAVNAISQAVGLLPVHILKRGTDGAKDRAPEHPAYRLLHHEANEWTPAGKLRQEVTRDALLYKHGGFAEIIRVGDGRPFELIRIDPEVSPITVTMTSDGPAYAVQEDGITRQIDRANILHIPSPSLSGLGLAHDARKVIGLSLLMERHAERLFANGARPSGLLSLKGNISTDTLKNARAAWNAQHSAANSGGTAVLPADVVWQSLTLNSADAQFLELRKYQIEETSRIFRVPPHLLYEMGRATWGNSEQVGQEFLDFSLMHWVSAWEGEIRLKLFDREERDKYIAEFFTDGFARADLAARMDAYSKAIAARILSPNEARAAENRPPYSGGDRFENPNTTASGAAA
4269511..4270215                   PHAGE_Rhizob_vB_RleS_L338C_NC_023502: tail assembly protein; Rpal_3976; phage(gi588498685)     2.30e-28            RhodopseudomonaspalustrisTIE1MMRTIHLHGRLKTLFGPKHRFDVLTAAEALRALNCAFPGEFVKELSEGAYCVVRGNRHSGMQLDIELVTSFKLGNADLHIIPVAAGAANGTNKAVGKTILGTVLIGAAVFMSGGAAGGLLAGMGAQALTGVGITWGNIALVGLGLALSGGATLLANASDPTTSDTKTDESFTTAGPTNLAQQGAAIPLIYGETMTGSNVISFDADIEDIRAYQDAQGSMADYYLGAFQYRVGNS
4270215..4270541                   PHAGE_Brucel_BiPBO1_NC_031264: hypothetical protein; Rpal_3977; phage(gi100014)      1.14e-08            RhodopseudomonaspalustrisTIE1MSSPQNHRAFFGDGEHDFRLTAPLILELERKTGCGIAVLFQRLFHRSFSLTDLHEIIRCALIGGGTDPRRADQLIATYAVDRPISETLPIAIAIAELHWFGLPNEETK
4270227..4270238                   attL                                                                                 N/A                 CAAAATCATCGC
4270538..4270735                   hypothetical protein; Rpal_3978                                                      N/A                 RhodopseudomonaspalustrisTIE1MSKRSVLPPDWHTGDKVRLRSGGPWMTLGKASESHLGITVEVVWFDDGNQLRKESFFPVMLVRQT
4270735..4271232                   PHAGE_Azospi_Cd_NC_010355: phage head maturation protease; Rpal_3979; phage(gi168495135)     2.35e-19            RhodopseudomonaspalustrisTIE1MDKVEIKATLAVDDAGVITGIAWPFGSPDSVGDIITKGAFNVAVSDLPMLFQHDPADLVGTWEEVRETDEGLAVKGKLHLAESARARAVRGLVQGKLIEGLSIGFRTKASARQGSNRVISALDLFEISLVRNPSHPKARVTSAKQFNSAEAIAAAINSAAAQIRK
4271235..4272383                   PHAGE_Azospi_Cd_NC_010355: Phage major capsid protein; Rpal_3980; phage(gi168495136)     2.11e-57            RhodopseudomonaspalustrisTIE1MKPHYELELKEADTDPAELVTKALADFKDAVDGRLTAIETKAANDNKLADRLDRIEAKMNRPGIGAANDNDDLERKAFISFARRGVERMGADEQKALTVSTDASGGYLAPEQFGNELIKLLRQYSPVRQYANVVSIGAAEIKYPRRTGSTVASWVDETEDRSESEPSFEQITIAPFELATHSDVSTQLLEDNAYNLEGELAADFAETFGIKEAAAFVKGSGVKQPTGIMTAAGITEVKTGAAATFPTSNPADVLIGMYHALPGVHAQNGVWMMNRTTLGTIRQWKDGNGRYLVLDPISAGAPVTLLGRPIVEAIDMDDIGANKYPVLFGDLKGYRIVDRVGLSVLRDPYSLATKGQVRFHARTRVGAGLTHPDRFIKLKVAA
4272389..4272958                   conserved hypothetical protein; Rpal_3981                                            N/A                 RhodopseudomonaspalustrisTIE1MRLANDTIAVKLGPVALTLRATLRAAFTLERRYEGFGTLSQAIALGEYGAFADLIEATCEDPLAGEALIQQLAAHNLIENIIELRDPLLRLVTMLAGADEENTNTAGPKITFEEYFTQLYRIGTGWLSWTPDQTWNASPAEIIEAYKGRREMLAAIFGKSDNGKSHDLTKMDKDERKRLWERLRAKQCQ
4272949..4273296                   PHAGE_Xantho_phiL7_NC_012742: P58; Rpal_3982; phage(gi238695645)                     9.14e-09            RhodopseudomonaspalustrisTIE1MPMKPPRICSCGLKVASGVMCRCQIERKAQADKRRPTARQRGYDSKWQHESKAFLARPENRFCACGCGRIADVVDHIKPHRGDMKLFWDRNNWQPMASSPCHSSRKQSLERKGTE
4273298..4273720                   PHAGE_Bacill_BCP8_2_NC_027355: hypothetical protein; Rpal_3983; phage(gi849253098)     1.80e-08            RhodopseudomonaspalustrisTIE1MGAYILLTYKGVTKSIAEWSKITGISDACIRKRLHEGWPVDRVLTQPKWKRVKGKSEQMPITLCSKQLEEWQRDIHRQHRELSRNIRAFVTSVENQMSDLRYNFDRLVAASIAGEQRPGVGPNSHQSRRDRSLPTAQEST
4273735..4274016                   PHAGE_Xantho_phiL7_NC_012742: P08; Rpal_3984; phage(gi238695595)                     4.51e-06            RhodopseudomonaspalustrisTIE1MVTLDDLKAHLNLTLGDDDELLTSKLAAAKQWITGYTASDVDAAGTPAPVDEAVRQLAAHLYENREATLVGITAQQTPFGFLDLLAPYRAWSF
4274018..4274434                   conserved hypothetical protein; Rpal_3985                                            N/A                 RhodopseudomonaspalustrisTIE1MANSDPSLALQAVIRERLIASYELMALVPPDNVLDVTGRPEVMPAVIIGEGQSVFDRFKATTFATLHVWFQEPGLVAAKEAAGAIIDALDVDAQRDGVLRLPGFVVHGMGATRTQFTRDPHGPYSHAIVTVEAIVSPT
4274434..4274754                   phage head-tail adaptor; Rpal_3986                                                   N/A                 RhodopseudomonaspalustrisTIE1MRAGSLDSVIEIRRPVTQVNGYGTPSVTEWVLVAKMRAAVLDYALDDREGQRGNVSETAITFRTRYLADVSLDHRVEYDGNSYTIKQVRALGRARGLDLRCERVGY
4274733..4275137                   hypothetical protein; Rpal_3987                                                      N/A                 RhodopseudomonaspalustrisTIE1MRKGRLLTILTALLSEDLCVLSQRHEYFGRSASDSSLTSWPELSTRHAWITSDFLNEPGRIHSSSKSMPLHKNGQGLSSKLLRGKIIERCAQIFVLPCRFINPFEGIAHLQSPAIRSIRNSYARSLWVVEEQIA
4275134..4275511                   PHAGE_Gordon_Nymphadora_NC_031061: protector from prophage-induced early lysis; Rpal_3988; phage(gi100001)     3.19e-07            RhodopseudomonaspalustrisTIE1MKGRKPELTGDANAMSDITPPPSWLSKYAKAEWRAVLPVLIERRILTPADLGSLTSYCVATGRVRELEIRNRAEFDLKLVRAQDAAMKTARQLAAELGLTPVSRNRPAVRDNDTAEDDDNPLNVS
4275486..4277108                   PHAGE_Gordon_Nymphadora_NC_031061: hypothetical protein; Rpal_3989; phage(gi100002)     6.83e-54            RhodopseudomonaspalustrisTIE1MTTRSTYPDWLFDGSPIDDPLGYGERAVNFLRLLKHPKSAAPKRALMLDEWQDRIVRRIYGPRDQNGHRIVKTVVLLLPRGNRKTSLAAALSLLHTIGPERRPGGEAIFAAGDRPQASLGFKEAAGIIREDKRLVKATRIYDAHNSVKKIVFNKDGSFLEAISGEGAPAHGRTPAFAFVDELHIWKNADLWTAIKSGLPKTQGSLLIIATTAGRGQDNIAHEIVDRARKVARGDIDDPSLLPILFETPDDADWRDEALWHRANPGLALGYQDIEGLRQLAREGETSITARETFRQYNLNVWLDRSTDPFVEMAVYDQGADPVDLEALKGRPCWLGVDLSSQTDLTVIVAAWRDDDGGFTVLPIFFCPKMNLREREEQTGAPYLEWERQGLITATDGNVVDFDAVEAAIRDLCDRFEVTEIAFDPALARSVLNSLQKDGYPAVEMRQGALTMMPAIAELERAIVAGKFRHGGNPVLRFNFANVEVERNKQQHAVRFVKSKRWLSIDGAVAAAMAVSRAAAGESGRSLYDDPALKPEDFVWS
4277108..4277503                   phage protein, HK97 gp10 family; Rpal_3990                                           N/A                 RhodopseudomonaspalustrisTIE1MADDLTRYLNSLPDKVRQQVSDAVRTEAERLSAAQRAALKAQEQAPDETGDLEASCTTTPGRDEFEVIVQAGGDATTKEVREGSGEPYDYAEAFEYGTSRQPARPFFFNTYDAMRAEIETNIGNAISEALK
4277500..4277832                   PHAGE_Brucel_BiPBO1_NC_031264: hypothetical protein; Rpal_3991; phage(gi100014)      6.09e-06            RhodopseudomonaspalustrisTIE1MTSECARTLAWAGSQHTFNLDHPWVRSFLAVRGLPGDNGSSPAACLWRFQQGHGTEEDVARVIELGLIGAGKTRSEAAALVRDNIRSGPLSPHIDVAAAVLSALFVGQGA
4277832..4280048                   PHAGE_Dinoro_vB_DshS_R5C_NC_041921: aerobic ribonucleotide reductase B subunit; Rpal_3992; phage(gi100063)     2.56e-21            RhodopseudomonaspalustrisTIE1MAVPALNIPIRADVDKFQRDMNKAADVAGKATMAITSKVIAMNSTFLASQGAAGVATLALGRVLGVVGPLALAITAVKDTFDFLRYSVKLAGDRIEEFNGIAAKAASANVTTDFYQRIEKAAKGAGLSIDDSADALRRFNDATSTKLGGSDLDKRLKELSDAGNLSGNRGLAQLSIATGTEERIRTVVRLIDEAMQKGERLAAIDIAEKAFGSKVAANLKADAGYLDQLLTRADAISKAEIISEADVGRAIALKERMEEAHKILADKWKPIQNDIAELGINYRENTSAIVEKFAELVGLANQLYASLKTIPDIFAELGNSPIWSRLTELTGALGLNSDPAALGIETGIDVGRATANDKLRAALQNRARMMRDMQQASDVQTAVRGDTSRNPAPAKSGEANAFDTTAASIERHTARVQADTKAVGLGAAALDEMRARASLLTAAQQAGIEPTAAMTARIDKLAKAAGEAAEQLAKAKVNSEIDFGRKTAMLSGEDVAIAGQLRSIYGNDVPTALASSEAAALRLNEALRGLSGSIETSLTSGLADIATGAKSVSAGFADMGRVVIRALEEMIVKMLVVQPLMRALSGGVLGFADGGLVSAPSTMMIGDYAMPKFAGGGMISGPGTGRSDSIPALVSNGEFIVNADATARHLPILKAINENALPRFADGGLVGSGAAPMISPGAVVAPTVQVTVQGSPGMTATDHEEMGRRVGAAAMDQIRGMIAKEFRTQTRPGGALRR
4280153..4281001                   conserved hypothetical protein; Rpal_3993                                            N/A                 RhodopseudomonaspalustrisTIE1MPLERKPEQQEYSSDAFICAAATETKRSKNVSASRSKKVQQRRRRTPFKDAQTLRKISTFELPTAPPAEKPLVAHSHTPCHATSSPSTTSARVESVAPANDNNLPVWELTGDVVKVFAASVALQLEDERRAVGFVFNLTLEAVERASKHPAGFLDRLKRDLDREVKRAGFDLPYWFCIDVDRDKRLHIHGAFLSHDMELPRLRELFRKAWGEWKGPGKDKQLWLSPLAVDDGWGSYSMRNQKRVAKIIGERTFTISQPLRREAQSAYNEIRRIMRSEQRRIS
4281200..4281391                   hypothetical protein; Rpal_3994                                                      N/A                 RhodopseudomonaspalustrisTIE1MTATTMHYVADHIFGEIVETRMRAVRAALGGLRISDFVADQLQSEIVASFIEQRDIAPLSSRE
4281607..4282083                   hypothetical protein; Rpal_3995                                                      N/A                 RhodopseudomonaspalustrisTIE1MAKLNCSIEAQTVLTFRKDGELTHRLLLSRGDLAALLKGNRLAPITGPEENGGVPCSHMAILDDSTDVHLQRSGDIVQLWTSVNAEPLTLSAEQVGQLRDGLNAAARAADDLALEIANIGEPEPDFIEDGSAPISQEQKILDRVYCNFARPKGRHPSA
complement(4282672..4283451)       PROPHAGE_Shewan_MR-1: serine protease; Rpal_3996; phage(gi24375430)                  2.35e-07            RhodopseudomonaspalustrisTIE1MPLADVFEKVRSGLIHIIFIDEEGAAIAKGTGFLCRGFLITNNHVFAGPRDARVCLRKDGSNEAFCLAGDDFARRLKTGSQESSYDYAVLDIPEIIGSDDFQFQLESPRGRRIGESIALIGFPLEHLNLTCHSGIISSFYDSGVAHVVQIDASVNAGNSGGPLIDPETAAVLGVVTRKSTGLSHMFNLLRNALHHNMEFIRRETSGSGFMIGGFNPSEGIVAGQQQILILLDEIERQANVGIGYAMSSEHLLAEPILQD
4283235..4283246                   attR                                                                                 N/A                 CAAAATCATCGC
complement(4283460..4285205)       PROPHAGE_Escher_Sakai: putative integrase; Rpal_3997; phage(gi15834496)              1.44e-26            RhodopseudomonaspalustrisTIE1MAIATNISRRPGSRNYYVRMAVPRDLQVRMGTPGKPRRELRKSLNTPDAREAKRLSRPILDEWERTFAELRRPKQLTEAELQNAIWRRYLELINADERFRQELPTGDELNAIWEYLEAEFGELNITAYRIFEELRDRFESNQRERVERLAQMKVEAARGETKLIADVVEQVIEARRLGVDPGTPEYRKLAQGLQRAELEGLKRTVERDAGDFSGESKDKLVQQPTVFDPPKGEGILELYDRYAREKSGRVSADTWAQNRKVVALFDNFVGGNAHISALTRKNVREWKEKLFEWPVKAIEASEFRGLSFLDTIERNKVVGKPVIQHKTINRYLAALGGFSDWLLANDFIGEQIMQGMYLEVDRRKKTVLPYSADQMRRIFESPLFHRCGGDKLEHQKGNVEVRDWRYWIPLIAVHSGARLGEICQLMTADVRQLHDVWIFHITEEGGAGTKSTKTEGSMRVVPMHSKLIELGFLKYHARMSAMGDRLFPEIKADARGYISGKASTFFNDYFRAIGVKSDRSLNFHSFRHGFADALRRAGYYDEQFGPLLGHTKSTTTGRYGIESEMVIADRVKMVEAVIQAK
