gi|00000000|ref|CP001132.1|  Acidithiobacillus ferrooxidans ATCC 53993, complete genome. 2885038, gc%: 58.85%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
120809..120820                     attL                                                                                 N/A                 CGCACAAAGTCG
121095..122675                     PHAGE_Burkho_Bcep22_NC_005262: serine recombinase-like protein; Lferr_0128; phage(gi158997721)     0.0                 MDRTRRVYSYLRFSDPKQSEGGSVDRQLDYARRWAVEHGLVLDESLTMRDEGLSAYHQRHVTRGMLGLFLAAVDEGRVPSGSVLIVEGLDRLSRAEPIQAQAQLAQIINAGITVVTASDGKEYNRQRLKEQPMDLVYSLLVMIRAHEESDTKSKRVKAAIRRQCDAWLTGKWRGIIRNGKDPAWVAWNGQAFELIPDRAESVRLAIEMFMDGHGAMAIISRLRSSGVTFAANASHLYKMIRNRALVGDRVLTVDGEEFVLPGYYPALMSEAEFSELQRLASQRHRRKGKGEIPGVITGMGICRCGYCGSAMVAQNLMSRKKRPDGKPHDGHRRLICVASSNAQACKVNGSCSVVPVEDAIMEWCADAMNLASLMSGGDAGVGLRVELAAARARVVEIERQIERVTEAMLSSDAPPSSFAKKARELENDLAHEQDIIGRCESELAARARLQIPGMADAWAALVDGVKALDYDARLKTRQLVADTFSRIDVYHSGLLPGDGKVIDIVLHGRSGAVRVLSGVLRGRTVE
complement(122703..122993)         PHAGE_Burkho_Bcep22_NC_005262: hypothetical protein; Lferr_0129; phage(gi939482379)     2.07e-11            MSIMRADIKRDILETMPGVPPIVPLKNSVISGRIFDGKPSVTLKDGRPARLAVVDEDGCIVEAGDDVAQTVWAIAITTYCTALLHGGHMKVTTEKP
complement(122990..123085)         hypothetical protein; Lferr_0130                                                     N/A                 MNNGNNGVFARPAPVIALDVDGNGGVRDATQ
complement(123085..123309)         hypothetical protein; Lferr_0131                                                     N/A                 MQRAMHNGEPIRQRFRPNADGAAPQHPRSSQNHATVSVAYRDGAVLTFLFDRSTPIVDLMAMVARAGAVRKVVL
123504..123794                     conserved hypothetical protein; Lferr_0132                                           N/A                 MAIIISNKIRWKLKEKHGVREEEVEECFANLVGDFLRDQREDHRSDPPTLWFIAETYMGRKLKVAFIPVDGDFHVRTAYEPNDEEARIYRKYGENQ
123791..124138                     hypothetical protein; Lferr_0133                                                     N/A                 MKSTNETKIPSTDEAWDNRELGADEAYVGVVKESDLQVDAAAGTQLISIRLGVSMIEDLKLIAQINGIGYQTLMKQILGRFVECEKKAIWSQIVSKQLKVEPTRQEPRHRKVAGT
complement(124221..124679)         PHAGE_Cronob_phiES15_NC_018454: putative transcriptional repressor DicA; Lferr_0134; phage(gi401817574)     9.76e-12            MLDHMDDIGDRVKKIRKRLGLTQAELGKHAGGLSKSAVHQWENGGTKPAWDALTALRKNLGINPDWVMQGEGAMLQELGTPNAATSIESGADALPFDGRGLTPRQRAMLGIFDRLTSSQQDEAMRELEETKRKNEEIIEELTRRKTNHANGS
complement(124730..124861)         hypothetical protein; Lferr_0135                                                     N/A                 MGQLFGPLVNGLATDPKRIANGFHGAAEDPYRFLLCSDGAHDQ
125101..126162                     PHAGE_Pseudo_phi297_NC_016762: putative DNA replication protein O; Lferr_0136; phage(gi374531278)     1.24e-30            MRFQPRDHSWRLFAGLRRLEETMPSDAQQQDCSALSSPPVPADIDLRSYCWMKLDLSRLHSSDFIHLASNEEFGAAVKLWTESMRQVPAGSLPNDDKILACLAGYRGSPRRWMKVKTIALHGFSLCSDGRLYHPVLAEMVLDAWGNKTQQPTSSPSDPRAKDRERLRRWRAAQRARQENGQHIRTEEAHSTQTDETIETFQGRFTETFPETAETFHRKEGEGEKRERRNVNNVSETAGETFQETPPTEPSPLPTATREGTLCKKLRGLGVRAAPHMVVVQEMCARHTDEHILAAAEIALEKKGSGIHVGYIAAMLKDAGKSSGKGGKNKPAAGPPNRSLLPPVAVAESHYVRL
126173..127027                     PHAGE_Burkho_Bcep22_NC_005262: DnaC-like protein; Lferr_0137; phage(gi38640334)      1.55e-40            MEKKSDIHHQPSVHAGDAARDLLARWGFDPTNEAILPDRHPQYRECARHGRYPISMVDERDVIRYLSPVCPVCAAEHASRRLMESAAIPKRYIDCGFDNYVVEVHGQQAAIDVCRDYADHFEEHAQKGSCLILCGNPGTGKNHLASAIAHVVLAKGHSVLQVTAYDIIARIRQTWQRGIGNSTELEVIRGFAEVGLLIIDEVGKTFGSDGERVHLFEVIDHRYRDLKPTLILSNENMEGVEKCLGPAAFDRLCQNGGLLLFDWQSHRRGRGCTSDTALCLRGES
127024..128220                     hypothetical protein; Lferr_0138                                                     N/A                 MNRNHEQQLLIEPLSEGHPMLSTHPVRSACARSATRDMASYLIDLGPFFSEPKQFLEDLRASDFAPKGYDCSAQVAIRLMRWSQSIQLTPRQNHVMNQIISEAIRRGATIIESKIRTAEWSIPDHRDDHHDLAVTAATKALQHFTEKHDLATVPHPNIATFVDVHTRFASRDAMEDFIYRKRLDAESVLPHEPTFSKASLERVIRQRRSELKHLSGEKRQKKMRELERMEATLHGARTEVRLEYALEERGDHEARGSSERLSLEDQVSIAVGGIDLEEEDASYEMPADQREFLDLLIQVGKQQIAARQLIPYLAEAREYRAILGLLQVLKKTDEISLEAASLRELLGNRNLADIRKKVLRVGRADNREVVSLFESCKAYLRGENGECEVLAALQAASV
128217..129107                     PHAGE_Rhizob_vB_RleM_PPF1_NC_025427: putative adenine-specific methyltransferase; Lferr_0139; phage(gi712912781)     1.46e-38            MSVHPPFPWLGGKGKLADQILARLPEPSRELTYVEPFFGGGAVFFARRPSGIEVINDANGEIVTFFRVLRDRTDELIRYLQNTPYSRQLFYEWRAIPDPASLSDLERAARFFYIARSAFAAESTRKNPAWAFAKVFDNKARSMAAVIDSELRLVRDRLRYALIENDDAIAVVRRFDSPSAVIYCDPPYLQATRRDGQYADEMSDQDHENLLRVLCACDAYVAISGYPSDLYSDHLESGQGWSFVDFAHSCHANRSGRAGEDIDRDRTERIWMNPRLTQWYERHAPRQCSLLDLCAV
132959..132970                     attR                                                                                 N/A                 CGCACAAAGTCG

#### region 2 ####
complement(305753..306547)         PHAGE_Pelagi_HTVC008M_NC_020484: spermidine synthase-like protein; Lferr_0321; phage(gi460042476)     1.44e-09            MNESAGSLTNSPDLPSQPVLAQPFAQEDFRSITLRFDLSATQSTMHKSAPDKLVLGYTRTMMGFLILQPKPKRIAMIGLGGGSLAKYCLRHIPDAHFTAVEINSKVIELRDRFGIPPDGANFQVLSGDGAVYVSNHTKPVDVLLVDGFNHDGQPRQLCSARFYNDCYAKLRKNGVLVINMLSSDWQCDAYVARIQTSFDNQVIVIDAEESGNKIVFAYKGTDFPRLASEISDRVRALKPSHSISLHATAQKLSQQFKQLYSGRA
complement(306662..307060)         Rhodanese domain protein; Lferr_0322                                                 N/A                 MTKSVINLAPQDAFHFLQKNPQAVLIDVRSEMEFLFVGHPKEALTIPWRDDPDWEINPDFLCRVRRATSLNRPVLLICRSGHRSLEAGQYLQANGFSAVYNVAHGFEGDLNDQHRRSSLNGWRFDGLPWEQI
complement(307229..307432)         hypothetical protein; Lferr_0323                                                     N/A                 MISYPCNDQTPLPPLSDEAAVTVLEFLHHFTECFESQYYGEIHRYYEERSQANTQAAELPPADDPLF
complement(307443..308282)         AAA ATPase; Lferr_0324                                                               N/A                 MSQTLLALYGLKWNPFSADLPIAAVSVPPKVEDFCWRIEHALVREGGFALIQGDPGTGKSVILRLLAERLSRLPDLTVGAIHHPQSNLADFYRELGDIFAVSLKPSNRWGGFKALRERWLAHLEATRRRPVLLIDEAQEMNAPVLCELRLLSSARFDSQSLLSVLLAGDARLTEKLRREELVPLGSRIRVRLHTESASRNELLGCLEHLMTEAGNAGLMTAGLCQTLCDHAMGNYRVLTQMAAELLAAATQRQLDQLDEKLFLELYGPAQQPARRKAAH
complement(308286..308813)         putative integrase; Lferr_0325                                                       N/A                 MLEGEEGLTLGALNRATQAWVEREYHRARHSEIGTTPLACYLEGHSVARECPSVTELSRAFRIEVRRRQRRSDGTVSLEGKRFEIPARYRTLPEVTLRYARWDLTQVDLVEPRTGTVLCPIHPLDKTAHADGARRTLNPTPDLSPLPATGMAPLMRQLLAEYAATGVPARYLPKE
309036..310280                     PHAGE_Helico_phiHP33_NC_016568: integrase/recombinase; Lferr_0326; phage(gi371671343)     1.59e-09            MMEVLIKRPTTLARYLGAPLAEERDNFLKHCAQVGYSPSMLKKISWVIWAVAEYIGIDHGKVTMQDIRIAVDHRTRFKRQSTQTKESKSTRQMFIHFATEWARHMGCLGQAAKPQDSFAVQIGIFARHMREERGLSPVTIATRCERLGWFFAGLNPPRGTLDAITICDLDAFVELKGQQGWTRASLGSLASSLRSFFAFAEARGWCAKGLTATIESPRLYTREGIPEGPGWEDVQRLLVSTAGDHPVDIRDRAILMLLALYGLRRGEVAALQLEHLDWDGDKICVVRPKQRIAQRYPLLPSVGEAIVRYLRDVRPQCEHRALFLTIGAPMRPLSAESISHVARARLNQLGLTLSPRGAHCLRHACASHLLSSGFSLKQIGDHLGHRNANSALSYTKVDLTGLRQVAEFDLGGLL
310277..311218                     PHAGE_Lactob_iLp84_NC_028783: integrase; Lferr_0327; phage(gi971743086)              3.48e-08            MNLSELISLYIAHKRALGYRFLTEDHLLRSFCRAVGDRPIETIGADAVSIFLNGKGSVTAYWYKKYHVLTGCYRFALARGMVTAIPLPRSVPKQDGPIFVPYIYSHAELKRLIDVLPALCAGRSRIDDYVFKALLLLMYGAGLRISEALSLHIHDVDLQQTILYVRETKFYKTRIVPLGKDLTQILNEYIAKRNNRYSAATDAPFFCFRDGTPLSRSAAHGLFRRVRAKADVLKEGGPRHQPRLHDLRHSAAVHRLIAWYRCGADLRDLLPKLATYLGHVDLSATQRYLTMTPELLHEASLRFAHYALEKDHD
311211..312209                     PHAGE_Brevib_Jenst_NC_028805: putative recombinase XerD; Lferr_0328; phage(gi971744895)     1.62e-21            MTDVTLLGPWIRRFLLEYLVRERNLSINTQRSYRDMLSLFLPHVSKQLNKSVDRLTVSDLSADLIRQFLSDIEESRHCLAATRNQRLGGLHALARFIGENSPEHIEWCSQIRLIPFKKTAYPGITYLEKPEMDALLESPDRQTPQGQRDYALLLFLYNTGARASEAADLRIVDVDWHAQCAHIIGKGNKRRTCPLWPTTLDQLRALATQRGLDQRVFLNRNGQPITRFGIHTMVERHAARACVQVPSMSTKQVSPHVIRHSTATHLLRAGVDINTVRAWLGHVSLTTTNIYAETDLETKTRALATCAPPTAEGMATKHWRQQPDLMAFLHGL
complement(312284..313144)         integrase, catalytic region; Lferr_0329                                              N/A                 MKTRIDSPQRDRWALLRFAIIGPLLAAPPAPGELALALKALSARSWRHPRTGEPVRFGFSTLERWYYRVRAAENPVLPLRNRLRSNIGQFPSLTPLVITTLTTQYREHPGWTAKLHYDNLQAVLQGQGVTLPSYPTIRRYLQAQGLFRQARPKRATAGAIAARDHLERLEVRSYEVEQTAALWHLDFHHGSRQVLTRAGTWETPMLLGIIDDHSRLLCHLQWYLDETAESLIHGLCQAFMKRGLPRALMTDNGAAMVAEETTNGLALLGVLHQATLPYSPYHYVAL

#### region 3 ####
1234058..1234069                   attL                                                                                 N/A                 CAAATAAATCAA
complement(1234079..1235074)       PHAGE_Pseudo_PMG1_NC_016765: integrase; Lferr_1271; phage(gi374531680)               1.75e-19            MSIWIDNKDRRNVQVQVDGRRLHRILPAGSSARDAKQVEARLRAELTSASPLPERAGDPPLAAVMPLYLKHLEHLRSPETARFHAARITPWLAQYTASEAPKCAAMIIRDMTGAYAPATINRSLGALKKALTLAWEQELTPENYGARIKRLPEHNERHIYLTLEQVNELASHASDPVAAAIWIALFTGCRRGEITKLKAEDVGETTITIRAGNTKTLKTRTVPIIGPMRLWLPFIPLPINAEGLKSGFRRAREKAGLPHLHFHDLRHSCASILLASGADLYTISRILGHSSTKMTERYAHLQTDAQSIALERAFSENALNNALNKKPALGR
complement(1235219..1235473)       hypothetical protein; Lferr_1272                                                     N/A                 MIAAAKKDASRLGTLIRLNGTRLPITGLQPNGETSVRSVYVDLETTIGATIAYGYSLEDAIPALIDAWDNATAWTRRWMINAPN
complement(1235670..1235897)       hypothetical protein; Lferr_1273                                                     N/A                 MAPSLSQESIAYHPHSRAFAVAAHNARAATQGQSKVFVLYCDGVVLAFLFDRSTPIVDLMAMVSRAGTVRKVVLR
complement(1236172..1236630)       PHAGE_Cronob_phiES15_NC_018454: putative transcriptional repressor DicA; Lferr_1274; phage(gi401817574)     1.61e-11            MLDHMDDIGDRIKEIRKRLGLTQAELGKHAGGLSKSAVHQWENGGTKPAWDALTALRKNLGINPDWVMQGEGAMLQELGTPNAATLIESGADGLPFDGRGLTPMQRAMLGIFDRLTSSQQDEVMRELEETKRKNEEIIEELTRRKTNHANES
complement(1236681..1236812)       hypothetical protein; Lferr_1275                                                     N/A                 MGQLFGPLVNGLATDPKRIANGFHGAAEDPYRFLLCSDGAHDQ
1237205..1238113                   PHAGE_Pseudo_phi297_NC_016762: putative DNA replication protein O; Lferr_1276; phage(gi374531278)     4.78e-26            MKLDLSRLHSSDFIHLASNEEFGAAVKLWTESMRQVPAGSLPNDDKILACLAGYRGSPRRWMKVKTIALHGFSLCSDGRLYHPVLAEMVLDAWGNKTQQPTSSPSDPRAKDRERLRRWRAAQRARQENGQHIRTEEAHSTQTDETIETFQGRFTETFPETAETFHRKEGEGEKRERRNVNNVSETAGETFQETPPTEPSPLPTATREGTLCKKLRGLGVRAAPHMVVVQEMCARHTDEHILAAAEIALEKKGSGIHVGYIAAMLKDAGKSSGKGGKNKPAAGPPNRSLLPPVAVAESHYVRL
1238124..1238978                   PHAGE_Vibrio_X29_NC_024369: IstB-like ATP binding protein; Lferr_1277; phage(gi658311189)     5.95e-49            MEKKSDINHQPSVHAGDAARDLLARWGFDPTNEAILPDRHPQYRECARHGRYPISMVDERDVIRYLSPVCPVCAAEHASRRLMESAAIPKRYIDCGFDNYVVEVHGQQAAIDVCRDYADHFEEHAQKGSCLILCGNPGTGKNHLASAIAHVVLAKGHSVLQVTAYDIIARIRQTWQRGIGNSTELEVIRGFAEVGLLIIDEVGKTFGSDGERVHLFEVIDHRYRDLKPTLILSNENMEGVEKCLGPAAFDRLCQNGGLLLFDWQSHRRGRGCTSDTALCLRGES
1238975..1240171                   hypothetical protein; Lferr_1278                                                     N/A                 MNRNHEQQLLIEPLSEGHPMLSTHPVRSACARSATRDMASYLIDLGPFFSEPKQFLEDLRASDFAPKGYDCSAQVAIRLMRWSQSIQLTPRQNHVMNQIISEAIRRGATIIESKIRTAEWSIPDHRDDHHDLAVTAATKALQHFTEKHDLATVPHPNIATFVDVHTRFASRDAMEDFIYRKRLDAESVLPHEPTFSKASLERVIRQRRSELKHLSGEKRQKKMRELERMEATLHGARTEVRLEYALEERGDHEARGSSERLSLEDQVSIAVGGIDLEEEDASYEMPADQREFLDLLIQVGKQQIAARQLIPYLAEAREYRAILGLLQVLKKTDEISLEAASLRELLGNRNLADIRKKVLRVGRADNREVVSLFESCKAYLRGENGECEVLAALQVASV
1240168..1241058                   PHAGE_Rhizob_vB_RleM_PPF1_NC_025427: putative adenine-specific methyltransferase; Lferr_1279; phage(gi712912781)     1.46e-38            MSVHPPFPWLGGKGKLADQILARLPEPSRELTYVEPFFGGGAVFFARRPSGIEVINDANGEIVTFFRVLRDRTDELIRYLQNTPYSRQLFYEWRAIPDPASLSDLERAARFFYIARSAFAAESTRKNPAWAFAKVFDNKARSMAAVIDSELRLVRDRLRYALIENDDAIAVVRRFDSPSAVIYCDPPYLQATRRDGQYADEMSDQDHENLLRVLCACDAYVAISGYPSDLYSDHLESGQGWSFVDFAHSCHANRSGRAGEDIDRDRTERIWMNPRLTQWYERHAPRQCSLLDLCAV
1241108..1241602                   PHAGE_Vibrio_VvAW1_NC_020488: single-stranded DNA-binding protein; Lferr_1280; phage(gi460042909)     5.77e-50            MAGVNKVILLGHLGRDPEMRYMPDGTAVANMTIATSESYKDRDGNRQERTEWHRVALFARTAEVAGEYLRKGSRAYIEGRIRTRKWTDKDGQERYSTEIVGDRLQLIGGRRDGADGGNPAPQHGGGGGGDMGAAPMEEFDDDIPFITKAETICQPRWRLPRVRF
1244191..1244202                   attR                                                                                 N/A                 CAAATAAATCAA

#### region 4 ####
1465668..1465691                   attL                                                                                 N/A                 TCACTAGGTCGGCAGTTCGAGCCT
complement(1468320..1469270)       PHAGE_Cyanop_KBS_S_2A_NC_020854: RNA polymerase sigma factor RpoD; Lferr_1508; phage(gi472341467)     7.59e-44            MLTEDADGDVPDALEEIAEVGQDEACLWPETPEFDAIADPAWEAGASDHFDAIKLYLQEIGHNPLLTAEEEVSLGLSAQQGDITARNRLVECNLRLVVRIARRYQRQHTLPLLDLIEEGNLGLIRAAELFDPTRGFRFSTYATWWIRQNIDRGIMQQSRVVRLPTHIIKNLSAVLRSSRQIAQTMQGDPRVEDVAQVMGKSVAYVEDCLQQDRRVVSLDAPSRWEGSPSLAQTLVDADQADLGASLEEQDLQRQIHRALLGLDVRHRTILIRRFGIDGQDGASLSAIGKELGVSHERVRQLQEEALDLLRQHTELQ
complement(1469292..1469648)       hypothetical protein; Lferr_1509                                                     N/A                 MEPKTISSHQLHHALPDVIRGTPSAAVTPPDDVTLDFTTHAGNHLILHIPRSLFDALCIRLGNAYKAGCWVAARCREVDGLSQQSIERYVNIMTCDKFGLERGSSNNPHITVSSSTAV
1470002..1471321                   PROPHAGE_Shewan_MR-1: transposase, putative; Lferr_1510; phage(gi24373689)           5.81e-13            MEASTLTSHQQASLHRIEVRPILPTERERWNTLMQAHHYRGFRTMAGRTLRYVATLDDRWVALLGWQAAAYQCQAREQWIGWSWVLRRQRLHLIANNARFLILPRESFPNLASRILSLNLRRLSADWQSVYGHPIVLAETFVESPRFTGACYRAANWVDVGWTKGFARRPGAGYVYHGQPKRLLLYPLHPQARIWLAQPQPQSEWTKTPMQTVTLSDAQMEGLRQIFFRLPDARSRLGKQHPLPAILTIAVAAVLTQAQSYIAMAEWAARLTQAQLKRIRARFNPRTQRYVAPSEPTLRRVLQGANVTALDAAIGAWLLGIAGFEAVAVDGKVLKGAVREDGSQVHLLSAFMHGQGATIAQKEIARKTNEIPELRSLLKDVDIQDKVVTADALHTQRKTARFLVEDKKADYLFTAVKGNQRKLRNSLICLPWGDFPPQR
1471443..1471757                   PROPHAGE_Shewan_MR-1: transposase, putative; Lferr_1511; phage(gi24373689)           7.30e-05            MKDGTLREDCAFGLTSLTKDRTTPENLLGIARGHWEIENRNHHVRDTTYHEDLSQIRTENGPHMMATLRGLAMSILRLIGVKNIAQAGRDFAASARKTLRQFGY
1472062..1473381                   PROPHAGE_Shewan_MR-1: transposase, putative; Lferr_1512; phage(gi24373689)           5.81e-13            MEASTLTSHQQASLHRIEVRPILPTERERWNTLMQAHHYRGFRTMAGRTLRYVATLDDRWVALLGWQAAAYQCQAREQWIGWSWVLRRQRLHLIANNARFLILPRESFPNLASRILSLNLRRLSADWQSVYGHPIVLAETFVESPRFTGACYRAANWVDVGWTKGFARRPGAGYVYHGQPKRLLLYPLHPQARIWLAQPQPQSEWTKTPMQTVTLSDAQMEGLRQIFFRLPDARSRLGKQHPLPAILTIAVAAVLTQAQSYIAMAEWAARLTQAQLKRIRARFNPRTQRYVAPSEPTLRRVLQGANVTALDAAIGAWLLGIAGFEAVAVDGKVLKGAVREDGSQVHLLSAFMHGQGATIAQKEIARKTNEIPELRSLLKDVDIQDKVVTADALHTQRKTARFLVEDKKADYLFTAVKGNQRKLRNSLICLPWGDFPPQR
complement(1474400..1474804)       hypothetical protein; Lferr_1514                                                     N/A                 MYNLRPEGFGGSNRHVQISSENLSPAQAQAMVQHSLWQMQAMQVSMDRQITRMQRLMRVSFGPFALPSFRLPVPVTLLSSPPEMPFSGAIPRDPLSLGAGANAAPSLPMTPLPGHRTLQVRWDRPKAPSPKIPL
complement(1474906..1475733)       PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposition protein; Lferr_1515; phage(gi557307613)     2.16e-43            MNPSTLARLPMMLTDLRLPTMKQAWQGLATKSNQEDWPAERFLATLLEQEILGREARRLERRRQESNLPPDKRLGNYDFTVVPTLSKAHVQALAEADGWIQEGANLLLFGPPGVGKSHLVAAVGHALVERGCRVYFTRTSDLVQQLQSARKELRLPATLAKLDRFDLLILDDFSYVRRDQAETSVLFELISERYERKSLAITANQPFSAWDQVFPEAAMTVAAVDRLVHRSTILELHAESYRRRTAKNRANVTVTTKEVKRDLEETDSQDGVVSQ
complement(1475730..1477214)       Integrase catalytic region; Lferr_1516                                               N/A                 MPGKWLGDIQVNKYKELRRQYQQETAANKMGISVRTARRLERREAALPSQRGPRTWRTRKDPFAAYWQSEILPLLRQAPGLLATTLLEEMQRLHPGEVEPGHLRTLQRRIRDWRALEGPDREIYFPQAHDPGRQCLSDYTDATELCVTIDGQILVHKLYQFVMAYSGWRHVEVVLGGESFISLSAGLQNALWRLGGVPQEHRTDHLTAAYNNQSEHEELTRRYAALCRDYDLRATTNNQGESQENGSVEARQRTLKQALNQALMLRGYRDFSDLAAYQAFVEEVATHMNRRVQKRLAEERPLLQPLPERRSSDYVETTVRVSSNGVFRVSHTTYSAPSRLRGHPLQVRIYTQHIEAYYGSTLVVRAEKGLRDEAVIDYRHVLPILRRKPGALMRWVYRDALFPRQAYRDTWERLQERCPERDACRIMVGLLELAADACEAELALRLDQILAAGELPGLETLRMALHPAQTVPTDPIISVPSLEQYDQLLMEVTA
1478331..1478354                   attR                                                                                 N/A                 TCACTAGGTCGGCAGTTCGAGCCT

#### region 5 ####
2026070..2026081                   attL                                                                                 N/A                 GAAGGTCTGTAC
2026815..2027165                   integrase, catalytic region; Lferr_2024                                              N/A                 MVKADARTTVERPAPSNKLSEAEVQEVLDACHRPDTAHLPPTQIVPRLADEGVYLASESTFYRILKAEGMDARRGRAHPPRKEKLPTTHTATAVNTVWSWDITYCTPSQRSPPFWG
2027629..2027640                   attR                                                                                 N/A                 GAAGGTCTGTAC
2029689..2030582                   PHAGE_Gordon_GRU3_NC_030935: hypothetical protein; Lferr_2026; phage(gi100017)       3.27e-05            MMEVLIKRPTTLARYLGAPLAEERDNFLKHCAQVGYSPSMLKKISWVIWAVAEYIGIDHGKVTMQDIRIAVDHRTRFKRQSTQTKESKSTRQMFIHFATEWARHMGCLGQAAKPQDSFAVQIGIFARHMREERGLSPVTIATRCERLGWFFAGLNPPRGTLDAITICDLDAFVELKGQQGWTRASLGSLASSLRSFFAFAEARGWCAKGLTATIESPRLYTREGIPEGPGWEDVQRLLVSTAGDHPVDIRDRAILMLLALYGLRRGEVAALQLEHLDWDGDKICVVRPKQRARRQLS
complement(2030631..2031458)       PROPHAGE_Escher_CFT073: transposase/IS protein; Lferr_2027; phage(gi26248359)        6.10e-41            MNPSTLARLPMMLTDLRLPTMKQAWQGLATKSNQEDWPAERFLATLLEQEILGREARRLERRRQESNLPPDKRLGNYDFTVVPTLSKAHVQALAEADGWIQEGANLLLFGPPGVGKSHLVAAVGHALVERGCRVYFTRTSDLVQQLQSARKELRLPATLAKLDRFDLLILDDFSYVRRDQAETSVLFELISERYERKSLAITANQPFSAWDQVFPEAAMTVAAVDRLVHRSTILELHAESYRRRTAKNRANVTVTTKEVKRDLEETDSQDGVVSQ
complement(2031455..2032939)       Integrase catalytic region; Lferr_2028                                               N/A                 MPGKWLGDIQVNKYKELRRQYQQETAANKMGISVRTARRLERREAALPSQRGPRTWRTRKDPFAAYWQSEILPLLRQAPGLLATTLLEEMQRLHPGEVEPGHLRTLQRRIRDWRALEGPDREIYFPQAHDPGRQCLSDYTDATELCVTIDGQILVHKLYQFVMAYSGWRHVEVVLGGESFISLSAGLQNALWRLGGVPQEHRTDHLTAAYNNQSEHEELTRRYAALCRDYDLRATTNNQGESQENGSVEARQRTLKQALNQALMLRGYRDFSDLAAYQAFVEEVATHMNRRVQKRLAEERPLLQPLPERRSSDYVETTVRVSSNGVFRVSHTTYSAPSRLRGHPLQVRIYTQHIEAYYGSTLVVRAEKGLRDEAVIDYRHVLPILRRKPGALMRWVYRDALFPRQAYRDTWERLQERCPERDACRIMVGLLELAADACEAELALRLDQILAAGELPGLETLRMALHPAQTVPTDPIISVPSLEQYDQLLMEVTA
2033439..2034380                   PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; Lferr_2030; phage(gi100026)       3.48e-08            MNLSELISLYIAHKRALGYRFLTEDHLLRSFCRAVGDRPIETIGADAVSIFLNGKGSVTAYWYKKYHVLTGCYRFALARGMVTAIPLPRSVPKQDGPIFVPYIYSHAELKRLIDVLPALCAGRSRIDDYVFKALLLLMYGAGLRISEALSLHIHDVDLQQTILYVRETKFYKTRIVPLGKDLTQILNEYIAKRNNRYSAATDAPFFCFRDGTPLSRSAAHGLFRRVRAKADVLKEGGPRHQPRLHDLRHSAAVHRLIAWYRCGADLRDLLPKLATYLGHVDLSATQRYLTMTPELLHEASLRFAHYALEKDHD
2034373..2035371                   PHAGE_Brevib_Jenst_NC_028805: putative recombinase XerD; Lferr_2031; phage(gi971744895)     1.62e-21            MTDVTLLGPWIRRFLLEYLVRERNLSINTQRSYRDMLSLFLPHVSKQLNKSVDRLTVSDLSADLIRQFLSDIEESRHCLAATRNQRLGGLHALARFIGENSPEHIEWCSQIRLIPFKKTAYPGITYLEKPEMDALLESPDRQTPQGQRDYALLLFLYNTGARASEAADLRIVDVDWHAQCAHIIGKGNKRRTCPLWPTTLDQLRALATQRGLDQRVFLNRNGQPITRFGIHTMVERHAARACVQVPSMSTKQVSPHVIRHSTATHLLRAGVDINTVRAWLGHVSLTTTNIYAETDLETKTRALATCAPPTAEGMATKHWRQQPDLMAFLHGL
complement(2035446..2036309)       integrase, catalytic region; Lferr_2032                                              N/A                 MMKTRIDSPQRDRWALLRFAIIGPLLAAPPAPGELAPALEALAARIWRHPLTGEPVQFGFSTLERWYYRVRAAENPVLPLRNRLRSNVGQFPSLTPLAIETLTIQYREHPGWTAQLHYDNLKAALQGQDVTLPSYPTIRRYLQAQGLFRQSRPKRATAGAIAARDRLERLEVRSYEVEHTAALWHLDFHHGSRQVLTRAGAWETPMLLGIIDDHSRLLCHLQWYLDETAESLIHGLCQAFMKRGLPRALMTDNGAAMVAEETTNGLALLGVLHQATLPYSPYHYVAL
