gi|00000000|ref|CP001279.1|  Nautilia profundicola AmH, complete genome. 1676444, gc%: 33.51%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

#### region 1 ####
230358..230370                     attL                                                                                 N/A                 AGAATATAAAAAG
complement(230729..231538)         PHAGE_Mycoba_Panchino_NC_031281: hypothetical protein; NAMH_0265; phage(gi100032)     1.05e-19            MKKFLQKEINKFLNFVKKTKSHNTYKTYETVLNEAINFIEIENNIINITPYRLHIAELNKKTIAKKVSALRSFFEFLETEGHKFKIIGDEHIKVPKTLPKPVSMEHIKKALKSATMDEYLAIITIFSLGLRISEAAGITLSDIKGDWIEIRGKGAKTRLLPVHPKLKDFINKYLEIHPKKEYLFEKEGVPLGADKIRYLIQRAFKKHGIHVTPHQLRHSFATYMLQNGARINDVSELLGHEFISTTQIYTKLSNSLKLQNYLKAHPLCS
complement(231510..231908)         conserved hypothetical protein; NAMH_0266                                            N/A                 MLNDSYRLSLEARYYFENGEYNKAYEKAKEAYILDPYNRMAFTVYTQSQIAKEWENFLIDANKYFKKIEQIANKKNLTDKERQKVKIMLEILLDEYKNLKPSLLISKDLKEKAKKEYEKAKEIYEKVFAKRN
complement(231962..233230)         tRNA-I(6)A37 thiotransferase enzyme MiaB; NAMH_0267                                  N/A                 MKKLYIETFGCQMNVKDSEHIIAELSDEYETTQNPEDAELILLNTCSVREKPVQKLFSELGALKKKNPNAKFGVCGCTASHMGKEIIKRAPFVSFVLGARNVSRIKEALNTPKAVITDINYDDTTYIFKNTRKNPYKDFVNIMVGCDKKCSFCIVPKTRGKELSIPMDLIIKQIEKLAKEGVKEITLLGQNVNNYGKRFSVEHPKVDFTDLLKEVSKIDGIERIRFTSPHPLHADDRFLDEFANNPKICKHIHFPLQSGSSEILKAMRRGYTKEWFLNRCEIIRQIPDVSITTDIIVGFPGESEEDFEHTMDVLEKVRFEQIFSFVYSPRPLTEAAEMPNQVDKNIAKERLYRLQSRHGEILDEIAKNQIGKIYKVLIDEPGSGKSDNFFTVKIPETNKYLGEIVDVKITEANKHTLKGEVI
complement(233239..233469)         conserved hypothetical protein; NAMH_0268                                            N/A                 MTLKLISTDNNIIEKTYEEFLKEIKPNSFFYFHKDTSYKDLKDLIDKLENDGYSVYFREVKFGLDEGAYMYELHII
233622..234695                     transcription termination factor NusA; NAMH_0269                                     N/A                 MEKVLDLLSLVANEKGLDFDEVKEAFKRSIIKTAKKVLGDIDVEVDIENGELKIYQIFEVRNDDVALEEPEKYFYLDEAREFDPNAQIGDKLKVELDLGKLGRSGAMALQREFEREITRLLENEIYRKLISKLNTIVSGEVVKVDSEENTWVELEGVKGVLPMRNRIKGEKFEVGDVMKALLKYVHFDTNRGITIELSRTNPKFLEKLIESAVPEVRDGIIKIHTSARIPGVRSKVAVSSLNPKVEPIGTIIGKNGVRINSVSNELNGENIDVIEYSPKPEIFIARALSPAIVKNVQVDEDKALAVVEVDPDQKAKAIGKNGINITLAGMLTKYKIELKDAEEKSKDTSKLENLFKI
234704..235660                     PHAGE_Caulob_CcrColossus_NC_019406: DUF475 protein; NAMH_0271; phage(gi414088276)     2.66e-71            MRYFYVSFIIAAIGLILSFFIDGWSAVYLTSILAILEVSLSFDNAVVNAKILKDMDKIWEKRFLTWGMVIAVFGMRFIFPILIVAVAANLGVVETLNIAINHPEQYHEVLLKSENLIYAFGGAFLWLVFTDFLFEHKEIRWIKPVERYAEKLGRVNNISLIVATVIGIIVIYDSKSYEIGIAYLLGMLTYSLLNGINEAFAVEGAKNGLMGFLYLEILDASFSFDGVIGAFAITGNIFIIMIGLGIGAMFVRSLTIWMVEKGVLSEYKYLEHGAHYAIGVLAVIMLLKIFMHIGEVLTGTIGLGLLAIAFLHSKYENQ
complement(235654..236427)         UDP-N-acetylenolpyruvoylglucosamine reductase; NAMH_0270                             N/A                 MGYKTIDLSKLSSIKIGPKTSVKLINENNYDGEFLIGRATNTLISPNADNLGVLDDKYKFIEIKNGYLYVGAKTNNQVFYNFCKKNNIGGFEFLSKLPGTIGGSVKMNAGVKEYEISNRLLALKTLNGLKEKKEFEFNYRYSDINEPIFEAVFELKEGFDFELDLKLKKLRQNQPKDPSLGSVFKNPQNDYAGRLIEAVGMKGMIKGGMKVSEIHANFFVNIGEGTFDDMICLIKEAKKRVYENFGINLQEEIKIIY
complement(236431..236697)         flagellar biosynthetic protein FliQ; NAMH_0272                                       N/A                 MQSEIIALAVQTLKLALLLALPALLVGMIVGLLISIFQATTQINEMTLSFVPKILAIAVILIFTMPWMLNEMIDFTTYVFKLIPTFLR
complement(236687..237163)         hypothetical protein; NAMH_0273                                                      N/A                 MKHENFVEWLKRNELSLKCKPRTQRASYTEFFEGEFKGEKVPEFKRGEIYFAKLTNSAKTRPFLIYQNDYLNKACTEDIYHTVVVLPLSGQILGGDYRIFIKKRDLMSKDSEIVATAIGIISTGKIIFSKGLVTKLTENEMKKVDEAVMKVLGVNIAI
complement(237180..238073)         protein of unknown function; NAMH_0274                                               N/A                 MKDFTIAHSPDADDIFMYYAIKFGWVTNGNGLPNSKQKKKYNFKNIAEDIETLNQKTIKNIYDVSAISFGAYPFIKDEYALLRTAISFGYGYGPKLVKLKDKKLKPNFKVALSGEYTTNALIFKIAYPKARIVYKNFLEIEDAVLNGEVDAGLLIHESILTYDERLEVEKELWDVWCELAGEIPLPLGGMAIRRSIPLLDAIEIEEILTKAVDIANKHKSLLAKMLMERNLVRVNDKVLDKYLSLYANDKSITLDDEQINAINKLYEIGNKAGLLPTMKDIREYMIPKRYKELRMKS
238188..240551                     PHAGE_Bacill_SP_15_NC_031245: hypothetical protein; NAMH_0275; phage(gi100150)       1.39e-06            MRGAELFKKKIIKINFFSIFSVIILFAILSFSIVYLIVQASLQRDIEYTKNEYINTKKTIIKNQVDNLINYINEISIRENQKYLYKLQESVSFLTNILKKESPKNFEYILKQFAKKHPEFIVAMSDLDGNKIYANFKEYNKTKRKQFINEMQKGLIKSDNYFTFKTSKGLLYITGTIFTNKNNNKQYFVTNAILKSAIDNSIKRAVINMVDNARFVFNNGYVAIIEIINIDKDLGKFVAMPIRPDWEGKYINELIKNPVQLKHIRKCLMMLREKGEGFFDCFNENLNTQFDKKISFLKYYEPFNWALIGNIYINEVNNLIAKKQKQIKKELQSIFFLYIVISLVFLVIVYFLTKYENNLLSSIIDKYENKIQAKNKKLQTLNDNLQKEVDRKTNELIQHFLVDPLTGLPNREKLISDMKNYKYVAILNIDYFKEINDFYGMDIGDDVLKTVSSILSEISDTYKLPADEFAFVENDIEMLEEKVKKAIKKIESHKLIVDDGSEVEISISAGIGKNLIEAEMALKLVKSDKTIKMAVYNDNLPIVKEFENNIKWKNILKKVIKEKRVIPYIHPIVNSDTFEIKKYECLMRIEHEGKIYTPENFLEISKKTGQYFDLQKIMIEKCFEKFSKLDYKFSINLSAFELSNEQFRKFLIDKIDEYNIAEKLIIEILEDEELHNEELMGYLIFLHNLDVQFAIDDFGSGHSNLAYLVTKLPVSILKIDGSLIRNIENNANNYKLVKALTNMAKIFNLSVVAEYVENEKIAEMLKELGIEYLQGYFFSKPINLNEL
240630..241682                     PROPHAGE_Escher_MG1655: DNA strand exchange and recombination protein with protease and nuclease activity; NAMH_0276; phage(gi16130606)     3.48e-148           MDANKQKALELAMKQIDKQFGKGSLVKLSDKDIEPIAAIPTGSFGLDLALGIGGIPKGRITEIYGPESSGKTTLALSIIAQAQKDGGVAAFIDAEHALDVIYAKHIGVDVDNLLVSQPDYGEQALEIVETLARSGAVDIIVIDSVAALTPKAEIEGNMGDAQVGVQARLMSQALRKLTAAIHKMNTTVVFINQIRMKIGMMGYGSPETTTGGNALKFYSSVRLDVRRIATLKQADKEVGNRVKVKVVKNKVAPPFRIAEFDIMFGKGISREGELLDYGVKLDIIDKSGAWFSYGATRLGQGKENAKEYLKSHPELAQEIEQKIKDALGVELSHMIEAIEKDEDELNLKGE
241683..242948                     PHAGE_Strept_20617_NC_023503: enolase; NAMH_0277; phage(gi588295080)                 1.93e-154           MIFIEDIFADEVLDSRGNPTVRATVTLSDGSRASAIVPSGASTGVNEALELRDGGERYLGKGVLKACENVNTLIANELIGMSPYDQAEIDNIMLELDGTENKSKLGANAILGVSMAVARAAANSLDLPLFRYLGGANALVLPTPMLNIINGGAHADNDVDLQEYMIMPTGFDDFAEALRASSEVYHTLKKLLVADGHNTALGDEGGFAPNFKNNEEPIEYIIKAIEKAGYKPGEEITIALDAASSEFYKDGKYVLAGENKTLSAEELVDYYAYLCGKYPIVSIEDGVAEEDWEGWKILTDKLGDKIQLVGDDLFVTNKKILQKGIELGVANAILIKPNQIGTVSETMQTVRLAQRNNYKTVMSHRSGESEDAFIADFAVALNCGEIKTGAPARGERNAKYNRLLEIARSIAGAEYIGKDLF
242986..243234                     PHAGE_Pseudo_NP1_NC_031058: hypothetical protein; NAMH_0278; phage(gi100003)         3.98e-05            MIDFDDLQQPKKIDYKIIIVVIVAFLFAFYVYDLLFGSRSYTRLLDLQNEYKSLQTHVGSLKKKNEKLQKEYFELKELQGGE
243231..243806                     conserved hypothetical protein; NAMH_0279                                            N/A                 MKKLLFILITTFLFARINPFEPVVKPQNTIIINPTYFKETKVTLPSDARILKKIVFVYQSVSGDIKQKEVVINKHVDFHKPIYITHEPKKFPMKELNFLNLFTMYIKDKKIFIQTKDKLLRSFFLVKPFRIVLDFKKDADFLTIKKFLKDSFVKKVIVGNHKGYYRVVIYFDAKYMYKITKTSEGIKIEIQ
243793..244296                     shikimate kinase; NAMH_0280                                                          N/A                 MKSNNIILTGFMGSGKSTIGRILAKEFNTYFLDTDVLIESFENKTISDIFKNEGEEAFRKMEKKCFEWIKNSVTNTIISVGGGLPVYVPEIKEAGRVIYLRVEFEDILKRMNDEEIKKRPLFQDVKKAKELFKKRDKIYAELADIIIENNDLNKTVRLIKDYYAGDK
244280..244465                     hypothetical protein; NAMH_0281                                                      N/A                 MQVTNNTNLNAAIQVDVQKKAQDVVKNVLGDILEKTFENTKKIQEMAAASTGKGMNLNIKA
244632..245219                     PHAGE_Bacill_SPO1_NC_011421: gp31; NAMH_0282; phage(gi209972970)                     1.05e-07            MDWKEKLYNFYKSRREYIKTHLNENIDFTDVYDPYIIEKRSNPIMIIGEAPGANEVRLKQPFVGKAGENLAYLIETSGFDRAKDFLITNAFPFRTFEGNKNRTPKAGELKTGAKLLEREIEIVKPRLILLLGNSAIKAFSYIPWAKDVKNLQKCGIYDINGYKVGLCFHPSPLAFNRKDIRESLENFFKGLKTLI
245280..245570                     hypothetical protein; NAMH_0283                                                      N/A                 MAREINEQVLSFGEIQEPHESFTIAYGSVRVEQNRLYKDVLPTDAVKQVIIMLQEQAAEMEADGVKNITVTITPATNEKGEAVMDYYGMGTLIKLK
complement(245571..246086)         PHAGE_Synech_S_SKS1_NC_020851: cyanobacterial phosphoribosylglycinamide formyltransferase; NAMH_0284; phage(gi472340960)     2.57e-29            MKRIAVFFGKGGSNFLNLLKHQTNYQISLGITNIQNSEALNASSLPPILVSKDHKVILKALKELNPDLIVLAGYMRIVPEYIINEFKGKIINLHPSILPHFKGLNADKLSFEAKKACGITIHYADVELDSGDIILQYHINPNKFKTFEEYHKEMKKAEHKFLPAVVEMLCE
248359..248371                     attR                                                                                 N/A                 AGAATATAAAAAG

#### region 2 ####
complement(1560639..1561817)       PHAGE_Synech_S_SKS1_NC_020851: GDP-D-mannose 4,6-dehydratase; NAMH_1668; phage(gi472340900)     3.71e-159           MSKKVALITGITGQDGSYLAEFLLEKGYEVHGIKRRTSLFNTKRIDHLYKDPHEEDVNFFLHYGDMTDSMNLTSIIKQVQPDEIYNLAAQSHVAVSFEEPEYTANADGIGTLRILEAVRLLGLTDKTKIYQASTSELFGKVQEIPQKETTPFYPRSPYAVAKMYAYWITVNYREAYNMFAVNGILFNHESPRRGETFVTRKITRGMARILLGLDKKLYLGNLSAKRDWGHAKDYVEMMWMILQYEKPEDWVIATGRTTEIREFVRLAGKYLGLNIKFEGEGIDEKGVVESIDEEKLLKVLKDANVAHSESIIEQAKSLIGKDIINVDPKYFRPTEVDLLLGDASKAREKLGWEPKITLEEMTKEMVESDLKENYQELVLKECGFEVPKSCGV
complement(1561810..1562259)       GDP-mannose mannosyl hydrolase; NAMH_1669                                            N/A                 MLREDVFTCIVKNTPLISIDFIIENKGKILLGKRVNEPAKGYWFTIGGRIYKNEKISEAQKRILKDELGYLGDFNPEFVGVFEHFYDTGFNGIPTHYVNLAYKVNLDKISLNIPFEQHSEYIWLEADEIMKRKNVHSYVKDYFKGSKYV
complement(1562259..1563686)       mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; NAMH_1670     N/A                 MKNIILCGGSGTRLWPLSRKLMPKQFLKLFDGKSLFQKTVERNSKISDKLEVITNLDHYFIALDHLEEIDSKFTIQNTKFLLEEIGRNTAPAIAFAALESDKNEILFVTPSDHLIKDMDKYNEAVNRAKELAEEGYLVTFGINPTEPNTGYGYIECSIEDLGFSSSVFNVKTFHEKPDLAIAEKYLENNSKISDLKPKSYYLWNSGMFMFKAGVFLEELQKHSPKVYEEVLKSYEKRQIVNENQFRLKEMQNIPDISIDYAVMEKSDKIKAVKSEFDWNDVGSFDSLVDEIDSNEAIEINSKNNFYYTETKNKVIAAIGLEDFIVVDTKDALLITKKGQTQKVKDIVNTLKNNSQFSILNSPLIVHRPWGTFETLITDNGYKIKRIIVKPGKRLSLQKHFHRSEHWVVVKGTAEVQVGDKKFLVRANESTYIKMEEIHRLSNPGKVPVVLIEAQVGEYTGEDDIVRIEDDYKRYL
complement(1563696..1564739)       PHAGE_Synech_ACG_2014f_NC_026927: rIII lysis inhibition protein; NAMH_1671; phage(gi100233)     7.94e-34            MKILITGTAGFIGFHLAKRLIERGDEVIGLDNINDYYDVNLKYGRLEETGIKREEIEYNKLITSNKYTNYRFIKLNLEDKAGIDKLFKEEKFDKVCHLAAQAGVRYSLENPDAYIQSNIVGHMNILEAVRHNDVKALSYASSSSVYGLNKKQPFSTDDNVDHPISLYAATKKADELMSHTYSYLYNIPTTGLRFFTVYGPWGRPDMALFKFVKNILEDKPIDVYNYGEMQRDFTYIDDIIEGVVRVIDNPPKSNPEWDGRASESIAPYKVYNIGNGSPVKLMDFIEAIEESLGKEAKKNLLPMQPGDVPSTWADTTDLEKDLGYKPYTDVKEGIKNFVEWYKGFYKI
complement(1564736..1565029)       conserved hypothetical protein; NAMH_1672                                            N/A                 MNTQIRLNPEEIKIIKNMINKIFGKSDIYIFGSRTDLSKKGGDVDIFVIPQNYENIYEKRIKAKINLKDALFRNVDIVIHKDFNNLIEKEALKGIKI
complement(1564992..1565465)       conserved hypothetical protein; NAMH_1673                                            N/A                 MIEFHIKVLNDSLEILKNIRDEFNEKYGNIDVSKYEDIKSYDIKSLDTLAYRFSKIQSLLGEKVFKEILEKLEYDLTDKSYIDILQYIEKEGIINSIYEWKKLREIRNSLSHDYSEEIESVVNAINEMLDSIEIFEKIVKKVEEKYEYANQVKSGRN
complement(1565485..1566123)       PHAGE_Bacill_SP_15_NC_031245: hypothetical protein; NAMH_1674; phage(gi100146)       1.36e-12            MFTNNTEAEAVKLFANTYLAMRVSFFNELDTFAEMKGLNTKDIIEGVCLDPRIGNHYNNPSFGYGGYCLPKDTKQLLANYTIENIPQKLMEAIVDSNTTRKEFIAKRVLDKLSTINNQPSTGTVGVYRLIMKAGSDNFRSSAIFDVMEMLKPFVKLVVYEPMAKGDEVEGVEFVSDFEEFAKKSDVILANRIDENLQRVKDKVYTRDIYSRD
complement(1566297..1566677)       PHAGE_Bacill_SP_15_NC_031245: hypothetical protein; NAMH_1675; phage(gi100146)       6.16e-05            MKIAIAGTGYVGLSNAVLLAQNNEVVALDIIPEKVEMINKRISPIEDKEITEFFQTKNLNLKATTNKKEAYEGAEYVVVATPTDYDPVTNYFNTKSIESVIKDVIEINPKATIVIRSTIQSDILKE
complement(1566674..1567096)       PHAGE_Bacill_BalMu_1_NC_030945: hypothetical protein; NAMH_1676; phage(gi100051)     2.85e-07            MRNWKDLKIWQNSHQLVLEIYRILNNFPKTEEYGIISQLKRAVVSVPINIVEGHSRNSNKDFLRFVYISRGSLEEVKYLMLLSKELGYIKHQEYANIENKLSEISYMINSFIKFLKNNSKNHNNLTNQNNPNNFNTKDLH
complement(1567228..1567464)       conserved domain protein; NAMH_1677                                                  N/A                 MKKFLILFLFVISLFAKININTATMQELHSLKGIGHTKALAIMEYRKKHPFQKIEDIMKVKGIGVKTFEKIKDEIEVK
complement(1567490..1568494)       PHAGE_Synech_ACG_2014f_NC_026927: rIII lysis inhibition protein; NAMH_1678; phage(gi100233)     2.00e-32            MNILVTGGAGYIGSHVVKLLLENTSYSVTVIDSLVTGFESTIGELKKIRNFDFIKADLSKWNEIEKIFKANKFDAIIHFAASLIVPESVEKPLKYYLNNTANTANLVKLANEYGVNKFIFSSTAAVYGEPDISEIGSGIKEDFPANPINPYGQSKLFSEKIIQDTAKANSQFKYVIFRYFNVAGAAPDLSIGQKTKNATHLIKVASECAVGKRDGMYIFGTDYPTPDGTCIRDYIHVMDLADAHIKAVDYLDENESDVFNIGYGKGASVKEVIDTVKKVSGVDFKVETAPRRAGDPAMLIADSSKIKEKMKWQPKYDDLETICKTAYEWEKKLI
complement(1568491..1568910)       putative lipoprotein; NAMH_1679                                                      N/A                 MRIVKKVTLFTLYFTLYILVAGCSTKTTPIYAVIKTPKFKVADQGFLEKGFGYKKLIIYKAANAPVEITLKNSYICMNGKCMDKEKFIKEYMPQGYPVDFFDKILSKECIDGFYCKKEKKKILFKDKKNNILIMIKELN
complement(1568934..1569374)       conserved hypothetical protein; NAMH_1680                                            N/A                 MNPNKVYLTQTDTTVGFLSQDKKKLNKIKNRPLNQPVLREVDSLETLKRFVRVPGKYKKMLRRAKKTTFIFPNGESYRVVKDERHLEFLKKFKWMYSTSANLHKKRFDEVWAREQADIIVEDKRGLFEGEPSSIFKLSKNKIKRIR
complement(1569361..1569783)       conserved hypothetical protein; NAMH_1681                                            N/A                 MKTKFDSVVKVKKQKVDAIERNLQKINVSIQNLNTKIEELTKTLLSFTFPKEGNFALLNQIKHQQHIIRDEIQNLKNQIMVLESRKKELLEELKKANIDYEKMKYLQAEEIKKMIKEKKLKESRDLDEIAILLRKNGESE
complement(1569780..1571021)       PHAGE_Mycoba_Cali_NC_011271: gp254; NAMH_1682; phage(gi204305879)                    6.70e-27            MVDLIVGLQWGDEGKGKIVDLVAKNYDIVIRSQGGHNAGHTVVVDGKKYALHLLPSGVLNPNATNVIGNGVVVYPKQLIKEIRSFEHNIKEKLLISDKAHMILDHHIAIDQAREKLRGKNAIGTTGRGIGPAYADKIARVGVRMGELRNIPKLIEKLVHYYEMNKGYFDYLGIEIPSISKLEEELKEYKQELGSLITNTTQYLWDNMDKNMLLEGAQATLLDIDHGTYPYVTSSNTIASGALTGSGIAPKNLNKVIGIAKAYATRVGNGPFPTEDDGKAGDKIREQGGEYGTTTGRPRRCGWFDVVAARYAVTLNGCDEVAVMKLDVLDGFDKVKVCVGYEIDGEKIDYFPSELDDVKPVYVELDGWDGSVHVTKWEDLPKNAQKYIEFIEEKIGTKIKYVSTGAERNATVIR
