gi|00000000|ref|CP001299.1|  Methylobacterium extorquens CM4 plasmid pCMU01, complete sequence. 380207, gc%: 66.34%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
243536..244596                     PROPHAGE_Shewan_MR-1: putative transposase; Mchl_5622; phage(gi28275189)             2.27e-20            MSKAVDLREDFDADGLRRLARRSCDAGQSRRLLALAAIYEGASRMQAARIGAVGLQTVRDWVLAFNAAGPDGLIERKKPGPRFKLDDAQRQALAAVVEEGPDLERHGVVRWRLKDLAAWLFERFGVSLDESSVGREVKRMGYAKLSARPRHHRQDPKALTAFKKNLPARLRAIRARLPTGTPLELWWQDEARVGQKNTAPRRWARKGSRPAAPKDQRTASAYIFGAICPEKGKGAGLVLPRCATPAMNAHLTEISRAVDPGAHAVLILDGAGWHVAADLVVPDNITLLTLPAHAPELNPVENVWQFLRENWLGDRIFDSYEDILDQCCDAWNKLVAQPWTIMSLGLRQWAHRL
244853..244864                     attL                                                                                 N/A                 CGCCGGATCGGC
245135..246649                     Integrase catalytic region; Mchl_5624                                                N/A                 MPGRHVTDHQMRLFMQFRQSDSVAAAAAKAAFSPATGHRISADPRLPSVKKAPRGRRRPDPLAEVFEAEIVPLLEAAPGLRPVAVFEEILRRHPDLGEGIRRTLERRIRAWRAVHGADQDVIFRQTHEPGRMGLSDFTDMADLGVTIAGLRLDHRLYHFRLAYSGFEHAHVVLGGESFVALAEGLQNALWSLGGVPREHRTDSLSAAFRNLDEAAQEDLTRRYEALCAHYGMTPTRNNTGVAHENGSVEGPHGHLKRAIADALLLRTSTDFPNLTAYRTFVDELVGRRNTRQVKRIDSERAALGRLPERRSCDYEQVSVRVSSAGGFRLRKVFYTVPSRLIGHSLRVRLYDDRLDVFVGGSHLFTLPRGRAHPGGRHDQVVDYHHVIHALRRKPMALLNLVYRDRLFPRPPYRHAFEALRAALPERQACRIAVDLLALAHDRGCEAELAECLAVELAAKRLPDLAALRARFAPDPAAIPHVTVALGSLASYESLLDAATTGEAA
246646..247470                     PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposition protein; Mchl_5625; phage(gi557307613)     3.18e-45            MKAPARTTTAVDTARLGIMLGELRLPTIKTVWPRFAEQADKEGWPAARFLAALAEHELAERDRRRIERHLAEARLPPGKTLDGFDFAAVPMLSKAQVMAVSAGDAWLTQGANLLLFGPPGGGKSHLAAAIGLALVEAGFKVLFTRTTDLVQKLQVARRELGLEAAIGRLDRFDLLILDDLAYVTKDQAETSVLFELISARYERRSLMITANQPFGEWGRIFPDPAMTLAAVDRLVHHATIFEMNVESYRRRTALDRKRGPGRPPTRATIKTADA
247666..248919                     PROPHAGE_Mesorh_MAFF303099: transposase; Mchl_5626; phage(gi13475318)                1.67e-26            MPSASLESTLELWSTTLRQTKQRIRPLFAAPSVAASANAFLDGLLGGERRKTGWMRAEAAGDPGPWRQQAILGRTHWDAEALRDVVRDDVVETLASPDAVLVIDETGFLKQGKASCGVGRQYTGSAGKITNCQIGVFASYVSDQGHAFIDRRLYLPKAWTEDPARLRAAHVPEAVAFATKPRLALAMIERAVRAEVPFAWVAADSIYGVGEIELALRRAYKGYVLGVTGQHRFWSWDANLDLAGTAENIAKGISDQDWLRLSAGAGTKGARLFDWAYLPLATLRADALDAALDQSLWTRGLLVRRSLSDGALAYFTTWCPAGTPVEKLVMVEGRRWAIEDAFETAKTELGLAHNESRSWHGWHRHVSLVMLAFAMLARVRRLANGPPPKTTLIAKLAGAVVHSGDPARGDAAGATAH
249082..249848                     PROPHAGE_Shewan_MR-1: ISSod6, transposase; Mchl_5627; phage(gi24374783)              1.37e-44            MLSDAQWGELEPLIEACRPKAKTPPQELRRTISAILWRHQNGAKWRAIPEELGPWWQAAQVFIRWARAGVWERLLDRVQERGVALGMVFLDGSNVRAHQKAAGAAKKGGSAAERDACEALGRSRGGYGTKACVVADGRGRAVAFRIAPGQAHELPHAIPLLDQLPGVPKWVVGDRGYSSHGFRAHIWTTGARPAIPTKRNEEQLACPDWAYNNRNIVERLWARLKEWRAVATRYEKTAVSFAAVLCLAATLDWLR
249897..250493                     PHAGE_Escher_pro483_NC_028943: DNA invertase; Mchl_5628; phage(gi971758535)          4.99e-36            MPRFGYARVSSTDQDLAIQLAKLKAAGCEVIRSEKLSGKSADDRPELATVMQFLRAGDELVVVRLDRLGRSTRDVLNLVHDLDQRGASLRILDPEMTTGGDVGRIVVTVLGMVAEMERKFILERQRAGIEAAKAAGVYAGKGRPKSVAVEEVRRRHGAGEGPAAIARSLGISRTSVYRALGGSTDDRSSAPPIGSGLP
250577..250867                     protein of unknown function DUF497; Mchl_5629                                        N/A                 MRKAEGTLFQWDDGNSAKCQKHGVTLAEIEAMLTGITRRIAPDVAHSAEEQRFLAVGRTPTGRPIFVVFTLRGALIRPLSARYMHAKEAQRYEESS
250851..251105                     conserved hypothetical protein; Mchl_5630                                            N/A                 MKRVPEMKTDAEAEVLLDQDLSDLDFSQFKPVRFEFERKAARLNMRVPEGLLNAVKVRAKERGVPFTRYVRELIERDLAPTRKP
252372..252383                     attR                                                                                 N/A                 CGCCGGATCGGC
252845..253650                     PROPHAGE_Shewan_MR-1: ISSod6, transposase; Mchl_5632; phage(gi24374783)              3.79e-15            MDALVPDDLWAVVEPLLPPEPEKPKGGRPRASDRSALAGIILVLRTGMQWKHLPHSEVGCSGKTSWRRLGAWQAAGVWAALHRAMLEQLQDAGALDWSRAALDSASLPAKKRGAATGPNPTDRGKPGTKRHLVVDARGTPLGLTLTGANCHDSRMLAATLDAVPGVRTGRRGRPRRRPDKLHADKGYDHHRCRCECRARRITPRIARRGIESSERLGRYRWIVERTLAWLARFRRLAIRYERRADLHLAFTTLACALICQAQAKRFCP
