gi|294474377|ref|CP001312.1|  Rhodobacter capsulatus SB 1003, complete genome. [asmbl_id: NC_000000].3738958, gc%: 66.56%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

#### region 1 ####
1040378..1040389                   attL                                                                                 N/A                 CAGCGCCGCCCG
1053810..1054994                   PROPHAGE_Escher_CFT073: transposase; RCAP_rcc00960; phage(gi26248352)                1e-09               MAKVEHTSDARVLVGIDISKHRHEVLIAVPGKTRRRRMTVLNTAEDYRRLIAALLDYGLPVTIGFEATGNYHRALMFALGAAGFDLKLVSSVALARTREALHNSWDKNDPKDAQVILRMLEIGAVQVFHDPLVVGTCDIQELSKTYEMVARSKTELWHRILTHYLPLYFPEADRFHRSSRGDWFLALLEAFPSPYMITAMDKDAFIEAAWPVIGRRVAKAALLADIYETSKTSVGLPVAPDSDAIRMFRLVLAQGRSLVQQRNAIEDRATELLADHPDYQLLRTIPGIGPVNALAVLAEAGDLRRFRHHRQFLKFCGMDLATVQSGVFRGRSKISKYGNARLRRTLWLASQAAVLKPANSFRDKFERYIAQDRHNPDLRRKAYTVARDQLPDGR
complement(1055082..1056062)       PHAGE_Rhodob_RcapMu_NC_016165: putative tail fiber protein; RCAP_rcc00961; phage(gi356870896)     0.0                 MTGLPGCGMGGGGVAPLAGYAVGGVMPVLLHDFVAGLALGSPWALTRASPATYVGADGLIRSAPADQPRYDYSTGKRALLLEASATNLLPNSAQFEAASWGKTRASVLANAALAPDGTMTADKLVEDTSNNSHFVARTGTQIAAGTSVTASIFVKAAERRWFALVTADSANAFRTSYFDLQTGTLGVVSQGYAGHVAQIVAAGNGWYRCSVTQTQAAASGNFNVYPSVVSANGATSYLGDGASGLYLWGAQLETGAAVSSVIPTEAAAVTRAADLASVAVAAGSYDLRRVDAAGTTVTKGVAHPGGALTIGAGSLYLLSLYPAGAL
complement(1056062..1056328)       PHAGE_Rhodob_RcapMu_NC_016165: hypothetical protein; RCAP_rcc00962; phage(gi356870895)     2e-47               MNDYFKGESIDLTGPALSSFAVTPNDAADLPAPVRAVTIGERGGVVKYSAARGGAVCTTGYLPVGQHPIWASRIWATGTTAEGMTGWV
complement(1056359..1057690)       PHAGE_Rhodob_RcapMu_NC_016165: putative tail spike protein; RCAP_rcc00963; phage(gi356870894)     0.0                 MSGVNSPNLVSAALLDSVLGNRNGTTVKTSINDLAAQLAGTGALADRLDDLDAALTGEPLVLFVAGQSNAARRASYASFDPPPNLYMWSYSGTALTASAATTTIGTFQTGAAIAGQANWGMFVGARAAIENPTRPVFVINISRGGVPIARWDASSPDPNMWAATVANVPAALTEIAALTGKTVDRVDAAFWWQGEADASNAAAYPGLLDALITRFRALSWFGETTPVICSGLSRFWDTNLAAIMNKAIRRTVAMDAARRRFVPTSLLPQYFWDSADNYIHMTGAGYWEASKLAWDAFANGGGWSGAGWQYDWDDTGNFIFGDDLPDPGYFGSFAKDLVGQLIFAVRNKSTDPTARAKLVARVAEKVAQLECDPGLGGRLVATDDYWGLIAAGMIIASFTSPKGDNQTSATLLTQIGGVTVAKKVRVGAADSGGTGYRMLRVEN
complement(1057717..1061145)       PHAGE_Rhodob_RcapMu_NC_016165: putative tail fiber protein; RCAP_rcc00964; phage(gi356870893)     0.0                 MRDLRPVSAPIHVLAAPQFDPGRGRITLDVPHGLTLAEIVARALPAATEADLARARVALVTERGTQIVPRELWALARPRPGVRVVIRITPGKGALRSILSIIVSVAAVALTGFLFPGFAVGSWQWGLAVAGFTIVGQLLINALIPPVKPDSEAKTTYAISGWRNRLEPGAAVPVVLGTMRYAPPFAATPYTEIVGDQQYMRAVFCLGEGEVAIDGMRLGETSLSEYDEVETEIRYGVAGELPLSLYPRQVVEEQIGVELTRPYPRDDAGNITQVSEEYEARRRVSDGDGGWIWETYTATRMVNAPTTATPVVRTTGPDAAGASIILAWTGGLFKYDDDGKRQPHGVSIRIEQRLIEAEEWQLVTQLDIVTTKAESFFRQHSWSFPSRGRWQVRLTMLQDEATDSKISQRTTWAALQTIRPEYPLAYPRPLALVALRIKATHQISGSIDNFNCLVSRICRDWDAASGVWVRRASENPAAAYLEVLTHASNPKAVADSGLDLDLLADWAEWCAAEGLTYNAVLEDQGTTLRDVLTEIAAAGRATPRHDGIRWGVVIDRPLVNTLIVDHINPRNSWGFKWSRAYRNPPHAFVVKFKDAGNDFKETERVVRWPGYTGEITMTEQLALPGKVHAAEVWREARRRQLEVLHRPDTYEVTQDGAVRTATRGDAIALSHDVLNRVQLAARVKSVDGAAVEIDDVVSMAAGETYAVRFRFFEAEDDTVGISVVRPVRTLPGETQILTLTGSGPMPIVGDLVHVGPARVESYTQIVTRIEATQDMCAIVRTVDAAPQIDTILAATPIPAWSSRVGAEIDDNLLQPSAPRFVALTSGLAATGLANRISYAVAPGTGSVPTIEIGLDHRISGAESWSSTTIPVANGGGTIDSYTPGQSVDLRARGIGATGVAGPWSATITIVVGSADAALPAALDASSISITTLLGGALIQFATGDDTATARVQIYRSITSLLDRETDAVGAPIAVEPGQSYATTLGDTTRTDLIVGGGLEAVGSWTLDAGWTISGGVATHAAGTASTLSQTVALTSGKYYRVSYDVIAVSGSTVQARLTGSTIRSGTAVSAAGAVFDRIQAVSGGTGIGIRAEASTIATIDNIRAYLETDACLAQGTHHIWIEPQNAAGVPGPVAGPFTIIVT
complement(1061142..1061582)       PHAGE_Rhodob_RcapMu_NC_016165: putative tail assembly protein; RCAP_rcc00965; phage(gi356870891)     4e-85               MSWSNRYVGIPHLDHGRSAEGADCWGLACVIYREELGITLPEYLGYGSVEEHGEIAALIEGAKTSPLWVPVTGPALAFDLAVFRRGRLSTHLGIVIRHGLMIHIGQTHAVLEDYRRGPWAHRFTGHWRHVQSPFERHVQIISEAAR
complement(1061585..1062112)       PHAGE_Rhodob_RcapMu_NC_016165: hypothetical protein; RCAP_rcc00966; phage(gi356870890)     3e-95               MSRRVSLNARQAQIDPVSAEIDVVLIEITHPELAAPIRLSTDNTERISDEPRIYGTRSTWRGADPATDPYLWIIASAVLPDDAEDAPAQAQIVLENLDAQLTEVLRSYTDLATVAVAVVEAATPNLIESEWHGMLLSTADGTSAEITLSLSRDEIELEHFPAGRMTRQKFPGLWR
complement(1062109..1062531)       PHAGE_Rhodob_RcapMu_NC_016165: hypothetical protein; RCAP_rcc00967; phage(gi356870889)     1e-80               MSYPVWPSDLPRPERSSYQLQPQDARRKRGFEAGPPGYRRRFSAVAKLVSLSLILTANQRAVFDNFYGDDCAQGAALFWMPDATRDGQPLLTHDGQPLLTHDGTPILLASRWLCAWGDTPPIETIQGIEFRKQFQVVVMP
complement(1062528..1065611)       PHAGE_Rhodob_RcapMu_NC_016165: tape measure protein; RCAP_rcc00968; phage(gi356870888)     0.0                 MSGPFVYELIFRGNASSATAAAKEVLAATDALAAETQGAAAVTGQDTAATIQNAAAKRDAAQASREAAAAAETEARAREALRKATTSIDSFTAPLPTPVPTPPPVPTPAPPVVPPVPNPVPASPAAGSGSGAAAAYSANLMYQWNDIAMMAMAGQNPMMLMMQQGTQVTQTFAGLRASGLSVGTALRASFMGMLNPMSLATMAVIGFGTAAVQWFMDSGEKAQTLDETLGDLEKSTSAVNRAMKEAKKGTSELSEDFGVGAKKAREMNLAMLGIAQMQAAKDLKDAIGSISDTIDDMASWGVVDLRTLEKQFNLTSYGAAQVGAAIQKYQFASTDAERAAAAQEIAKAIKKAQYNADGASEAALTFGANVAKVALEALRVKGTSEQIDALLKSVSKADIGAPYKTAAEKAKELKDLTGDVMKALKDTRAPYDLSDDLEMTKKIAEATAQYGADSLEVKRLQIEAERQDFEAKLRDMTQLTEAHKQQLRDLWESSKGLSSADPFGLVAAGRELYRSQAQTVGQLQLELSLVGQSETVRRRVLAIYQAEMDIRTAGIDRDSDRARQILQQADLSSDLQAQLDRVADAWDTVQKAGENAIDGIFDALKEGDLGGAFENLASELGSMFEELAITNPLKNAIFGTDYATMGDVGGLQGIWDRFTGKGPQVDPSQAAAAAMRTVASMNVTAATVIIGGAGVGGLAGGISAGGGMGGLQGSADVQKQVWSFFSSKGLKPHQVAAIMGNVQGESSFNPLAGGDDKNGVPTSFGLFQHHGPRADGLLAALGGRQNLGNVQGQLDYAWRELNTTHSGALAALKAAPDVSSATNAWMRQFERPSDEAMQKSWANRLGAAEQAMAKFGTTTTLATGQLGTMGTGFDKFGQALGSAVQGGGGGGFWGTLFSSVMSGLGIPGFAGGGQHGGGLRIVGENGPELEYTGPSTIVPADLTRRILSGGAPANSAQAPVVMLQPQIINNSSRQVDIEVQEVTDSRGQRQPRYVLSDAVGDGLITPGGRGRRAMREFYGVTPTGIAR
complement(1065613..1065828)       PHAGE_Rhodob_RcapMu_NC_016165: hypothetical protein; RCAP_rcc00969; phage(gi356870887)     2e-36               MIEIWQCHARTVAAFFDIQTQWRVTEVHGALWLGLDYSGVDVALRRGGYDDVDFADLQLMERAAIDAFVGR
complement(1065962..1066339)       PHAGE_Rhodob_RcapMu_NC_016165: hypothetical protein; RCAP_rcc00970; phage(gi356870886)     9e-71               MTKFVMTDKHLYWWPVTVRVPDPDNAGTFVEQSFEMQFEAQPREVLLACQERHAAATTDRERIEADKEQMRMCCRSWRGIVDERGADVPFSAERLDGLVGLPWGRAGIMTALAEANFGQEAKRGN
complement(1066472..1067398)       PHAGE_Rhodob_RcapMu_NC_016165: hypothetical protein; RCAP_rcc00971; phage(gi356870885)     2e-173              MASRRWPTLAMLHKIETTQGVDATPAAANALIATNITFTPIEATEVSRDLMLPYMGNQGAILTAMYGKLEFEIEIAGGGAAGTAPKYGSILRVCGLSETVTAATKVEYAIVEAAQESGTLYFNSDGVQHIFLGGRANVSMNFVPKQIPKFKFSFMGMLGTVTDVALPAVTMTGWTTPVPVSKANDVFSLHGYTGGAESLSLDLGNTVTPRFLIGSEEMKITDRKASGTAVVVADTIATKDWFTLAKASTRGALSIVHGTTAGNIVEITAPAVEIGKPAQGQTDNVANYSLPLRFCPVSGRDEIKIIVR
complement(1067401..1067598)       PHAGE_Rhodob_RcapMu_NC_016165: hypothetical protein; RCAP_rcc00972; phage(gi356870884)     8e-32               MDQPTEGGRYLRDPETGALTRVEEDDAPASETPPSAAGEDQGDLSTDAAADTIPAAPAAQTRKGR
complement(1067601..1068032)       PHAGE_Rhodob_RcapMu_NC_016165: hypothetical protein; RCAP_rcc00973; phage(gi356870883)     1e-78               MLADLLSHLTSHLSDPRWAGVDVAENIDALADRAGQVKSGTAIIMPWTETGRPQTLMGGGFRQWVEVQFVVGIVVRLYDGVMGGERAMAFDAYRSDIEAALAGVVIPGFVEPCELVGGETSPISTGVSIYAQTWATARFLTGA
complement(1068032..1068457)       PHAGE_Rhodob_RcapMu_NC_016165: conserved phage protein; RCAP_rcc00974; phage(gi356870882)     1e-75               MSYATLDDLIDRAGEAELRQIADRDRDGVIDADVVASALATADAAIDGYVGAKYALPLPSVPSIVRGWAVSIARYTLHRNGAPDHVGQDYKDAILALKDVSRGLITLPVAAGETAAAVSGGTVMAAHPEPVFTPARLAGWR
complement(1068457..1068747)       PHAGE_Rhodob_RcapMu_NC_016165: hypothetical protein; RCAP_rcc00975; phage(gi356870881)     2e-49               MSTHEGLPVAGYKPQSGEALAVVNGNKWLEELLLRRLDVLAADPAIDKIWLQIGRTAIEQGFMAVNRAVFQPGRAEIEVDPAAVFTELGKLFGEVA
complement(1068818..1069306)       PHAGE_Rhodob_RcapMu_NC_016165: hypothetical protein; RCAP_rcc00976; phage(gi356870892)     1e-86               MEDKIEVVLIGPAKIRDAVKRPGDKVRVTDAEREQLRAAGVLAEDAAGLIENADVAADLNAVIVDWQARALSAEAQLKLLEARVIELQGGPLPVAEDADGTWPIENESAPVAPVDPNTRPVSGTEDSLEPVQAEEQAEVQPVEEDPEAAKTTPKAGRGKAKG
complement(1069371..1070324)       PHAGE_Rhodob_RcapMu_NC_016165: major capsid protein; RCAP_rcc00977; phage(gi356870880)     0.0                 MAPPVNVRTAAVVDPILSTHARGYRNSEFISHLLFPRVTIPNRSMRVLKFGKEAFRMLNTRRAPGADKKRVQYGYASDPVALVQDALEGVVPIEHQQEAESIPGVDLGAGAVNMVLNVIDLGHEYAAAQLARTAANYDANHKLALTGTARWTSDLSNPKADVDAGKEAIRRSIGRYPNTITLGPTAANAAKNHPKIKEQFKYTSKDSITLDMLAAYFEVKRVLLGAAVWLPENATDDTMASDVWGDDVILSYVPDTGDNFQVPAYGYTYELAGYPQVQQPYFERSCDSWIYPTTVERRPYLVGAEGGFLLQNAGAAA
complement(1070335..1070679)       PHAGE_Rhodob_RcapMu_NC_016165: hypothetical protein; RCAP_rcc00978; phage(gi356870879)     2e-57               MIRSYHAILTLTASVTAICSAGDLIGFDDAPITAANAAVKGVAQYPATEVGMPIAITAAGTETVTAKATIAKGDPLCSAAGGGVRKAVVGTDANIFATALTAAAAGELVQILIR
complement(1070692..1071804)       PHAGE_Rhodob_RcapMu_NC_016165: putative protease; RCAP_rcc00979; phage(gi356870877)     0.0                 MTETSPAPLTARIEVFRPGTFTPMEGAAITYSAGDLRAIADAYDPETAPAPIVVGHPDTDAPAYGWIKSFHYDAKTERLFADLHEIEPQFADLVKGGRFKKVSMAFFSPGQPHNPVPGTWYPKHVGFLGAAAPAVSGLRNVKFSGRADTVFTSAFGERGFEETASILRGLRDFFIEKFGLEEADKVLPSYRLEWLSEIEIHPKPEPMFSGEQHPKKEPAVTQPDPAFAAREAEIAAREAAVAAREAAARHDENVAFAEGLIADGKLLPAVKDQTVAVLDALPLGATVAFAEGGAQVDLAKALRDILSAQPKVVTFGETDLGKDPGTATPVQFAADGKAVDAEALSRHEKALAHQRAHPGTDYLDAVRAVS
complement(1072072..1072626)       PHAGE_Rhodob_RcapMu_NC_016165: virion morphogenesis protein; RCAP_rcc00980; phage(gi356870876)     2e-100              MTGISISVELQEATARQALRDLLARMENPRGFYKGVGELLLASTSTRFKTETGPDGKPWTPLKPATIRARTKAGQLPLTILRSNTKGKSGSSLAGSINYIASDDELRIGSPVAYAAIHQLGGTIEKQAGSRYMVGRRFAKRDKEGGKDVAIKAHTITIPARPYIGISAADQEGILEQAQDWLEG
complement(1072719..1074200)       PHAGE_Rhodob_RcapMu_NC_016165: head morphogenesis protein; RCAP_rcc00981; phage(gi356870875)     0.0                 MAAVRKAIETAEDFDAAARAVLEIGATWTPDALAALFSQAMQLAALEGREAVFADWEDVSFADVDLTRQEFREQIDFLTQKRGKPTTAWTDAMQGDHDRAFVVAGVTDMAMLEEFQQAIIEGARTYDIKAFADEFDRLVEKYGWSYNGGREWRIRTIFETNIRTSYMAGRLRQMRDPDVVKVRPYWQYRHGETRVPLNPRPEHTSWHNLVLFWNDPWWDAHFPPNDWVCSCGVRTLSRGDLRRMGKDGPDKAPETSMVKHIDRATGAVIELPEGIGYGWDYMPGDLWERGLVPSALLNDGGAILTGDLKGHHVVSIDKAEPMADLLAASVPFTAERMPEGLPEPDYLRAFLEPFGADVGKAALWEDKSGATIVISEQLFLEHSGASKLMKRGRGEYAALLAEAIMNPDEIWMGVRAVPVDAVSGYFPAYEELMVTRRYIKVDQTTSLQVLFEVGRKAWGAVTGYASFNRAKPDYSHIDKQRVGKLLWKRKRPG
complement(1074296..1075672)       PHAGE_Rhodob_RcapMu_NC_016165: putative portal protein; RCAP_rcc00982; phage(gi356870874)     0.0                 MSRRHRKPRPTAFAEQPRKNLPAAATALIANARNDITIPFFSGVLQNSDDTLLSQGGGKGLKIYDEIERDTHAGAMLEKRKGALISREWKVEAGGDRPIDKAAAELVREMIGALPFDQVCKGLLDATLKGYAVSEVVWGRDGARIKPVKIKSIDQRRFVFDTEWRPRLLTWTAMSEGIELPERKFIVHRVGVKGENPYGLGLGSRLFWPVLFKREGITFWLHFLEKFAGPTIVGKSPIGSLPEEQRKLLTTLQGAVTSSAIVVPMGTDAEFLEASRSGSVTYEQFLNYWDRQISIATTGETLTTQVGESGGNRALGEVHMEMLDMLADGDGDLLSGTLTEQLLQWIVDYNLPGAAVPKIWRERPKNAQAEAATKKSQAEASEATARAIRTVVSEAARFEDDDVAREYILSFDITQSLSDKTIDALVEARRTFGTAPAAPDPFVTDDPTFAASWLKKKA
complement(1075669..1075893)       PHAGE_Rhodob_RcapMu_NC_016165: hypothetical protein; RCAP_rcc00983; phage(gi356870873)     2e-40               MIRIDQDRHINPAFVASMEWDHRHYMNGSDSVLIITMWDGKVHRVKHQPWYLNGPDAHKVEREILAAMEKGDAP
complement(1075890..1076180)       PHAGE_Rhodob_RcapMu_NC_016165: hypothetical protein; RCAP_rcc00984; phage(gi356870872)     5e-57               MFRCPGCGEPHMVTVGEGAGPRWGWNGSGDAPTFTPSILVTWSDPSDVPEEFDDTSKDIKRVCHSFITDGCIQFLGDCTHSLAGQTVDLPDWKDAE
complement(1076377..1078035)       PHAGE_Rhodob_RcapMu_NC_016165: large terminase; RCAP_rcc00985; phage(gi356870870)     0.0                 MTRRPKLKAAVSSKDFREKIAEMASEFARHIELSVEAFAPDPAAKKERLRRVAEADGFQFFMETYLPHYVKGEHSLFHQHIFARVPEILASEKGVRDLFVAPRGASKSTHLSLGFALYCIMRGLKRYIIEVCDVYEQAALLIEAIKAELTTNVRLQCDFPDAFGQGRLWREGEIVTRNNIRVEGLGAAKKIRGRRHGPYRPDLLFLDDIENDEQVRSPEQRTKLWNWIYRAALKVGPPDGSMDVIWVGTVLHFDAVIVRAAKAPGWRVTEFQAVVKFPDRMDLWDRFEEVYHNDGEDAAKAFYEARKAEMDQGAVVNWPSVQSLLFLMLERAADKAAFQTEYQNQPISEGNPFGDLTYWVQPLREWIFFGAIDPSLGKAGKGRDPSAILIGGFDRLAGKLDVVEASIRKRLPDLIIADTIALQREYRALMWFVETVQFQEFLRTELMTRAARDGVGISAVPITPSADKDLRIERLQPPVAAGLIRFSTAHRTLIDQLQQWPNGDHDDGPDALDMLWQNTLFYAGKGGGGGVMLTSGASSSSEKLGGYRLRRG
complement(1078032..1078535)       PHAGE_Rhodob_RcapMu_NC_016165: putative DNA-binding protein; RCAP_rcc00986; phage(gi356870869)     3e-89               MARNNEDVRRKARSDYVFRRFTAATIAAAYGISEATVGRWKKAAKEQGDDWDKARTAHVIAGEGVEAVVSTVVEDFMIQAQEILEEIKSGSHTTQEKVSMLVSLSDAMTKMAASAKKFAPKISELGVAQHVMREMLDFVREHFPHHSAAILEIIEPFSERLAEIYTS
complement(1078522..1078788)       PHAGE_Rhodob_RcapMu_NC_016165: hypothetical protein; RCAP_rcc00987; phage(gi356870868)     8e-45               MTALPSHPAVPPHVAESIERAHKRIDRHEERIQRIELDGATMAEWRKNTTETLKSIRSGITWLITLILGGLLAAVIKFVISGGLNGAQ
complement(1078785..1079297)       PHAGE_Rhodob_RcapMu_NC_016165: hypothetical protein; RCAP_rcc00988; phage(gi356870867)     2e-91               MSALVALAGSAGLKVVEKIVARKFGDGAGQLAGDILGAIADQVGVPVDQLDQAAEDQPAVVTQALRTVEERSPELIALYASGLELQKAQLAAEASEPLWMRAWRPAGMYLLAALWLWSVIVLHVVNAAFGTAMPQMSVDQLLTLSGIYMGLYMGGHTAKDMVAKWAGAQK
complement(1079297..1080226)       PHAGE_Rhodob_RcapMu_NC_016165: lysozyme; RCAP_rcc00989; phage(gi356870866)           2e-175              MQTSDKGVEALELEEGNVLRAYRCPAGKWTIGPGLTAASGVITPKAGMVITAQQSRDLTKKALAAKYEPRVALVMTGAKQHEFDAGVLFDWNTGAIQKASWVPLWARKAGKAAISEKFRLWNKGGGKVLPGLVKRRDRELRILFDAEYPVLLEIGRPSVSLARWVLKLNFDEKLNAMTAFGKLGYKVGLDSLAIPAAEIRRFQADHGLTIDGKIGRATLSTLQRRLDAAEKAKPVALASVSTTATGVSATAPTGMSDITDWIAAQPWAIGAAAAVIGLWGLWLAWAYRDVIAAKIQGRAPRLAATLRSF
complement(1080298..1080666)       PHAGE_Rhodob_RcapMu_NC_016165: putative transcriptional regulator; RCAP_rcc00990; phage(gi356870865)     2e-65               MTLSPDVPESLVDVAETFGLGVALSLMQHFGGQEVEFPRRKPSAELVKVLGEGVAAQLCHFLSGQRLYVPHGRSRMRRLDVQRLADTGRGRREIAATLGISQRHVRRLANRPPDQLPLFPDD
complement(1080715..1081392)       PHAGE_Rhodob_RcapMu_NC_016165: conserved transposable phage protein; RCAP_rcc00991; phage(gi356870864)     2e-123              MADDVKRRIAALLGMTKARGCSEAEAMAAAEKAAQLMQEHGLTEADVLFGKASAKSKTNGNGARDPLWGTLARNTNTALIYEFGRATFVGAGPGPEIAAYLFVVLGRAIDGAIAEYKGSQNYKRRRSIDSKRRAVQDFTHAMVRRLQMKLEALFEGVRSSEARSLAMSARDQMFPGGTPVRGPAPAKLRNGKALLAGLAAGERVELSHGVAGAKNCLSLSVNEPD
complement(1081392..1081499)       PHAGE_Rhodob_RcapMu_NC_016165: hypothetical protein; RCAP_rcc00992; phage(gi356870862)     2e-14               MMTFVLDYLRAHYWLTVAAPGAMIVVTAAVFWGLR
complement(1081496..1081942)       PHAGE_Rhodob_RcapMu_NC_016165: GemA-like protein; RCAP_rcc00993; phage(gi356870863)     6e-82               MNLNTVINIAKGQIGMAEDDYRAMLERVTGKASLKLMTDRQKTAVLDEMKRMGFQKTGGKRAPAARRDVRYCHVLWGLLHKAGVANVAGAKGLNAFIRSRYGAAWGAVPIDIDRMTDAKQISTVIEALQAWCKRHNIPTELPREGDRK
complement(1081939..1082154)       PHAGE_Rhodob_RcapMu_NC_016165: hypothetical protein; RCAP_rcc00994; phage(gi356870861)     4e-36               MMISTDFGVHINPQFVAAMEWVTGPTPKPSGFRALRVTMCTGAVFHIEAAQTNFGADDIEVAILKAHAGLK
complement(1082151..1083035)       PHAGE_Rhodob_RcapMu_NC_016165: hypothetical protein; RCAP_rcc00995; phage(gi356870860)     9e-165              MYYTNQLEDGRVELYALRPVTVAVFYDAALAETVADGLNDLESLRVGEPDQPDELLENDSAPDFHGVTIEIEEHPAVADDYDTEFEPLGTEDADKLLEAIIASKPAEVADDAVDIAVEEVAPPVEAAVAEVAAPRGEPSDADWADAFLAVEGGSNMAEVAATLGVSMPKLRGRYVAWSGAKKKAATQSVAAFVAPIAPLPDVSAQKDEPKPLWWRELTEFLGKLGYRGGWSAGLDLALVEGLASGKQMAVVADEIGKEVGEAKARFIALTPNGVTIERQTQLLQVLRARAGVLK
complement(1083112..1083387)       PHAGE_Rhodob_RcapMu_NC_016165: DNA-binding protein HU; RCAP_rcc00996; phage(gi356870859)     2e-45               MGKTFSKSDLVDAVAAQTGFAKTNVKDMLDATLGVITAQTEAGSKVTLMGFGSFEQRQKKARMGRNPATGEQVEIPASAHLAFKPAKPKKS
complement(1083480..1083686)       PHAGE_Rhodob_RcapMu_NC_016165: hypothetical protein; RCAP_rcc00997; phage(gi356870858)     2e-33               MLEAVIVGLDGAPDESLLNVFQGYGGSVRFSSGTYTARLCRITASCTEGDRAAVKAWLRKAKEIDRHH
complement(1083713..1084255)       PHAGE_Rhodob_RcapMu_NC_016165: host-nuclease inhibitor Gam; RCAP_rcc00998; phage(gi356870857)     7e-96               MTVSNRSKKTKTKASALPIPQDDSEARSAIREIGDLNRKIARAEADLNDEIAALQEKYGTLVEPLRAEIEAKTEGLKMFCEVNRDRLTRGNKVKFARFTTGEISWKLRPAKVTIRKVDEVLATIKKLGLAAQFIRTKEELNKEAMLANRQLAKTIAGVTIGSDGEDFIVEPFETELPEGV
complement(1084242..1084607)       PHAGE_Rhodob_RcapMu_NC_016165: LacI-like regulatory protein; RCAP_rcc00999; phage(gi356870856)     4e-67               MSLISLPNPEWIELLKAEAAKGKPIAQIAREVGMKRPSVSMLINGTYPAKSLDLVTRKHGAAVMQLYRSQMMCPHLRRGISADDCRAFATAPMSTSNPEKLKHWGACRACPINPTKGNDGV
complement(1084598..1085185)       PHAGE_Rhodob_RcapMu_NC_016165: TroR domain transcriptional regulator; RCAP_rcc01000; phage(gi356870855)     2e-102              MASFGPGELQMKVLQHLALPLTAPTIQIALALEVSPKRVSKAAASLVDRGYISRDRPGIYKITFRGLQAIADGKVITSGPVDASSNVLSRPETNGFRDRVWRSMRLRGTFTISDVVCDAVDGERDAMTNAGSYIRVLKSSGYVSELPGRRKGTKPGSNGLKRFRLDRNTGPRAPLHRSKLGIVHDFNTGEDIPCR
complement(1085185..1085958)       PHAGE_Rhodob_RcapMu_NC_016165: transposition protein B; RCAP_rcc01001; phage(gi356870854)     5e-144              MRNVFVETSNVREFYASLKKLNERGAEEACMVVVDGKPGLGKTTTLNRWVTQTGSVYLRAQKGWDYGWFIQELLAELSVDPKSIRGKRDRFARVLSELQDRADRAALRDRTFGIVIDECDLVSSRGEIMEAIRGISDLKFLPTILVGMGTLRDNLRRFPQIESRAPNKVAFTPATIDDARAIIRERCEVPVAEELIQYVWRASKGFNREILDAIAHIERFGLRAEIDDDGVTLADMAGQPIMTDRTNGKEIIVTVAA
1085638..1085649                   attR                                                                                 N/A                 CAGCGCCGCCCG
complement(1085991..1088291)       PHAGE_Rhodob_RcapMu_NC_016165: transposase A; RCAP_rcc01002; phage(gi356870853)      0.0                 MKDLVTTSAPQTFFTARELAEISKARGLTCFPQAERGARDYAARNGWNELGKNLARKRPGKVGGGGMEYHISLMPEPLRLAYEGSLITAGLKARLEAEHSADDRRIAALKASTLPARARNVMEARAEILKAIEGYAISQGMGRAWGVAQFLNAQAAMVVRQEIEARRDCGEILTDREIASLARPLLLKTGFMIDPERIVVANDRRGKPSVGRSAIYDWFKTRDEKGVVALAPAATKEEMPIPPAFADFLRHYAMPSKPSIADAYREYLKEAAAKDGVQLMTLTLSQVEYILRVRMNNIEKHVGREGMLTLRSRLPYVTRTTDDMWPTTVYTADGKTFDAEIEDPVSHNAIRPEITTVMDLVTRKVVGISLGRSENQKSVAEALRRSCVSHGICAIFYVDRGPGYRNEAMDADVSGLMGRLGITKAHAAPYGSQAKGRIERIQHTIWDRLAKRLPTYIGTDMDKEAGDKIHKLTRREIREYGRSRNLPTWAEFVKLCEDMVAEYNAKPHSSLPQIRDPETGKLRHMSPNECWEAHVVRGFEPVTVDPAEADDLFRPYEIRTTRRGEVLWNTNQYFDHALAPYHEPKVMVGYDYHQADRVWVREFDKETGQPGKLICVARFMANAERYFPVSYEQQAIENRAKGQLKRLERKVAAVEAERAGQQLVDLRAQNIPAGMFDAPAAEMVTITAPSTVSIAPVEAASAPAAKRRTFASDEALAAWALEHPEELKPNQIAVLRGCLNSSTARELFRMSGIDLEALRNLLRAVA
complement(1088288..1088755)       PHAGE_Rhodob_RcapMu_NC_016165: conserved transposable prophage protein; RCAP_rcc01003; phage(gi356870852)     5e-84               MPPRHRDPLTKDLFEWQPKKVAVGYSADVIGRGRLDSKIARIIAHALRDARDSGQSRAQIARDMAEFLGRPVSEAILNKWCSEGSEEHRIPLDAFIALVKVTGARDLLGFVPGEFGLTVIEDEYAALIEERLLEEHIEEMQARRAALAARRRVNR
complement(1088757..1089608)       PHAGE_Rhodob_RcapMu_NC_016165: ParB-like nuclease; RCAP_rcc01004; phage(gi356870851)     5e-157              MDTGMTTEVFTDIALDAIRVPEDRARSFDADGAAALAGLIEVQGLMHPITVKPHFASTDDHPIYVLIAGLHRLRAFELLGRAAIPARVLSERSTDEARMDEVLENLGRNELTALDRAQHLYELKVVWDRMHPDFANGGGKTFPTGDEKVQIFGFATEVAEKIGMSKRAINIAVKIWTGLTPDSRRRLVGTKTASNQSEIKALSEQSPARQERIMDMLLSDPPIAASVADALVLIEAGSRPSEVEKRYQAVHRAIEALDDHTLDRVVLAHEGRVIASLRRQGKI
complement(1089618..1089809)       PHAGE_Rhodob_RcapMu_NC_016165: hypothetical protein; RCAP_rcc01005; phage(gi356870850)     9e-28               MVGIVAMNAHEVADLVAMHLRLVSAVDAIAAEAASKPETKDIGLQLQLAAGMARTKRRAAAVC
complement(1089809..1090099)       PHAGE_Rhodob_RcapMu_NC_016165: hypothetical protein; RCAP_rcc01006; phage(gi356870849)     6e-54               MTQHRPHIVSTSAGFSVAGVGGKAPKFDSRKKAEAWLEGHFETIPEKKRPQSRSCMCCRKPFLSLGFHNRLCDRCRGAGGALRDEVRPQLPKGRGR
complement(1090096..1090221)       PHAGE_Rhodob_RcapMu_NC_016165: hypothetical protein; RCAP_rcc01007; phage(gi356870848)     6e-16               MTRRKRLDDLLQLLTVLIVIVALPIGTALWGLGIYAVVVQQ
complement(1090221..1090355)       PHAGE_Rhodob_RcapMu_NC_016165: hypothetical protein; RCAP_rcc01008; phage(gi356870847)     3e-19               MGGEDRFGLVEMIEDVIGAASIVLTIWVGCFLAGGLGGIAGVAP
complement(1090345..1090662)       PHAGE_Rhodob_RcapMu_NC_016165: hypothetical protein; RCAP_rcc01009; phage(gi356870846)     4e-53               MSPISSKPTPVLDGSAAGFRRAAGDLGEAIAVLSGGLPPDQWTRSRLAQALREIQSFLVAEAHEQDGRAAVSEDLLLRAAVASMMTHPVSVAMPVALVTEAGHGR
complement(1090659..1090952)       PHAGE_Rhodob_RcapMu_NC_016165: ner-like transcriptional regulator; RCAP_rcc01010; phage(gi356870845)     5e-50               MSKIWTKAQIKCALEEKGMTLTGLAILNDMNPSQMRSVWSRPVRSAEKVLADFLGVPPAELFPTRYPMRKSSLLSAENEARIARKKAGLDPDKGVAA
1091202..1091813                   PHAGE_Rhodob_RcapMu_NC_016165: c-repressor; RCAP_rcc01011; phage(gi356870844)        1e-116              MNPETLGGYERGDTSPDMQFLARYKQDFAVNLDWLITGDGEMFQSSAGSSQGLPAPIMDFSQPDFVRLPVYNDVHASAGSGMVPASEQADGVVAFTRRFLANQGARPDHCSVIWARGTSMKPTIPDGALLVVDHSQREVEHGCIYVFNVSDRLLVKRARWRLDGRLELVSDNADEGYPVETFGAESVDQLRVVGRVVYFGRTP
1091975..1092355                   PHAGE_Rhodob_RcapMu_NC_016165: hypothetical protein; RCAP_rcc01012; phage(gi356870843)     5e-69               MTNRATCRIIETLGSPTTDAAIGCLIGLGHHELADKLAAAEYDRDFWQRSLDKLPRNSELAGADDNDNADPFWAFKYKDVAAGDLAFSNLTAAQKEVNRLSAEVEEIRQQMILQLPLGTYEDHLGL
1092367..1092843                   PHAGE_Rhodob_RcapMu_NC_016165: hypothetical protein; RCAP_rcc01013; phage(gi356870842)     3e-89               MRPYGAAPPDDQEMLMAQYDIKYACGHTATKQLYGKDADRQRYIAWAGLNASCPACTAANAATALADLEAEYGLPPLDGSLKQIDWSRQIRADKIREFVVLMDKQRAAVREDKLELFDVQNAVVITAMCGVTAAKWWIDHRDDGAFSVARQLFAQAKG
1092846..1093535                   PHAGE_Rhodob_RcapMu_NC_016165: hypothetical protein; RCAP_rcc01014; phage(gi356870841)     5e-138              MLIRDSLRITINSLHGGAAVQFPKDTTLISSFKARFPRARWGSGTRSWHIPGKLAAARAQIWAEEQSDYLGRLEMAARDAEWADQSKPSPRPAIRSIMWHAIPGQPSRRATAAPPSGDIERAVRAVEDLAQDTVRRVLWGFLSPPFGVWQIYPAGWETGYGDSTYMGFSTWHKLTGGTGTVHWRWQAVCGGDTWQTDGWMPDALWSNQALAGHRAKLWAAINPKLGIVI
1093532..1093732                   PHAGE_Rhodob_RcapMu_NC_016165: hypothetical protein; RCAP_rcc01015; phage(gi356870840)     9e-33               MTELTISPINDPRPFSDVLRTWLDARQITAYAAAPILGTTQQSIGRWLSGQPCAHERAYRALLSIS

#### region 2 ####
1818942..1820309                   PHAGE_Strept_mu1_6_NC_007967: terminase large subunit; RCAP_rcc01683; phage(gi93007440)     1e-64               MTWTPPGLRSGAAWLACATPQEVDAFLGGLGNNALLALPWIFEFWALPHQLPPVGAWKSWVIMGGRGAGKTRAGAEWVRMQVEGAGPADAGPAHRVALVGETFDQVRDVMIFGESGILACSPPDRRPEWEATKRRLVWANGATAQAYSAQEPEALRGPQFDAAWVDELAKWRRAEETWDMLQFALRLGKHPQQVITTTPRNVGVLKAILNNPSTVVTHAPTEANRAYLAESFLAEVQARYAGTRLGRQELEGVLLEDVEGALWTTAQLEGLRLASPPAMDRVVVALDPAVTGGAGSDECGIVVAGAVTRGPVQDWRAFVLEDASVRGRPTDWARAAIAAMERWGAEKLVAEVNQGGEMVESVLRQIDPLVPFKALRASRGKSARAEPVAALYEQGRVKHCRDGRLGALEDQMCRMTVRGYAGKGSPDRVDALVWAMTELMIEPAAHWRRPQVRGL
1820495..1821685                   PHAGE_Geobac_GBK2_NC_023612: portal protein; RCAP_rcc01684; phage(gi589893765)       6e-64               MGLNFFRKAAPEVRTEPVAERKASVTGRIVAMASGAGRPVWGPRDTVSLMRTGFAGNPVGFRSVKLIAEATAAVPLICQDAERRYEIHPVLDLLRRPNAGQGRAELFEALIGQILLSGNGYLEAVCPEPGVPRELHVLRSDRMAVVPGADGWPVGYDYTVGGRKHRFDMTGHPDPICHIKSFHPTDDHYGLSPMQAAAVALDVHNAASAWSKALLDNAARPSGAIIYKGADGQGVLAPEQYERLIFEMETHHQGARNAGRPMLLEGGLDWKPMGFSPSDMEFHETKAAAAREIALAFGVPPMLIGIPGDATYANYAEANRAFYRLTVLPLLTRVSAALAWWLSGYLGAQIELKPDLDQVPALAVERDQLWARIGAAGFLSNSEKRVLLGLPPTAEG
1821689..1821922                   conserved hypothetical protein; RCAP_rcc01685                                        N/A                 MVVGGSRFLKEPFEVHEQRFEATERIMELQFTQVERRLERIEVMIERLEKRLFMTVYGVIAVILTQAVQGILDYAPK
1821933..1822487                   PHAGE_Shigel_SfIV_NC_022749: prohead protease; RCAP_rcc01686; phage(gi557307530)     1e-26               MKRGESGLERKFCGAQPVQLQDGARIEGYASLFGLPDQGGDVVAKGAYAKSLAAIAARGGSVKMLWQHDPAQPIGVWDEIREDARGLWVKGRLLPEVARAREALALIAAGAIDGLSIGYRTIAAEKDAKGQRLLAELELWEVSLVTFPMLREARVAAKGEAPEAAIWRDLARALSAATAELAAR
1822519..1823715                   PHAGE_Azospi_Cd_NC_010355: Phage major capsid protein; RCAP_rcc01687; phage(gi168495136)     4e-68               MKTETKARAGTGMPEGADPVAEVKTALAGFLKEVKGFQDDVKTRLQQQEERVTMLQTKTYAGRHALAAAATEEAPHQKAFAAYLRTGDDDGLRGLSLEGKALNSAVAAEGGYLVDPQTSETIRGVLRSTASLRQIASVVNVEATSFDVLVDKTDMGSGWASETAALSETATPQIDRITIPLHELAAMPKASQRLLDDSAFDIETWLANRIADKFARAEAAAFISGDGVDKPTGFLTKTKVANGAWAWGSLGYVATGAAGDFAAVNASDAVVDLVYALGAEYRANASFVMNSKTAGAVRKMKDADGRFLWADSLAAGEPARLMGYPVLIAEDMPDIAANAYAIAFGDFGNGYTIAERPDLRVLRDPFSAKPHVLFYASKRVGGDVSDFAAIKLLKFAAS
1823888..1824481                   phage conserved hypothetical protein; RCAP_rcc01688                                  N/A                 MMLNEVTAVPGTALPVAEFRDHLRLGTGFADLGAEDAALLSYLRAAIAAIEGRTAKALISRGFRLALTAWRWGDMQTLPIAPVATVTALRLVDAAGVETPVAAGWRLVPDMARPRIEALGAMLPMIPTGGRVEIDFTAGFGASWSALPVDLAQAVFLLAAQYYELRHDGAAEGGAMPFGVMALIERWRTVRVLGGRP
1824478..1824816                   phage conserved hypothetical protein; RCAP_rcc01689                                  N/A                 MSRPRLNRLLVLEEAVRVADGAGGHRLDWQAKGEVWAEVTAGSGSERAGEFVTLASVPFTIVVRAAPVGAARRPRPEQRFREGARIFRILAVAERDREGHYLSCFAREEVVA
1824813..1825220                   PHAGE_Strept_phiSASD1_NC_014229: gp33; RCAP_rcc01690; phage(gi298103498)             7e-06               MSYAVAGALQAAVYQQLRADAVLAALVGTAVYDAVPPGPLAGTYVSLGPEDVADASDKTGAGAVHDFVISVITDAAGFATAKAAAAAVSDALVGADLVLSRGRLVGLWFLRAKARRVEKADMRRIDLVFRARVEG
1825261..1825674                   PHAGE_Rhodob_RcapNL_NC_020489: gene transfer aget (GTA) orfg9-like phage major tail protein; RCAP_rcc01691; phage(gi461474972)     9e-18               MAAQNGKDLLIKLDLTGSGQFETIAGLRATRISFNAETVDVTSLESQGGWRELLGGAGVRSASISGAGVFKDADTDERARQIFFDGEVPEFQVIIPDFGIVQGPFMITSIDYAGSHNGEASYELAMASAGALSFTAI
1825682..1826008                   conserved hypothetical protein; RCAP_rcc01692                                        N/A                 MANPWAGEVEIWLGAERRVAKLTLGALAELEVGLGEASLLDLVRRFETGAFSSRDVLALIVAGLRGGGWEGRTEDLRTVEIGGGPVGAARIAAELLARAFTVPGQGGS
1826005..1826232                   phage conserved hypothetical protein; RCAP_rcc01693                                  N/A                 MSGGLDWPGLLRVGLRGLGLRPGEFWRLTPAELAVMLGEAAGAPPLTRDRLSELAARFPDTPRGGDLKGGGDGRG
1826219..1826878                   PHAGE_Edward_eiAU_183_NC_023555: putative bacteriotail tape measure protein; RCAP_rcc01694; phage(gi589889263)     8e-15               MVEVDGLDGLGRQAAELERALGGAEGVAASFSDELGRMRESLTYTGREVGTLSSSFGRSLRRAFDGVVFDGMKLSDALKTLAEGMSQAAYSVAMKPVQEAVGGALASTVNGLLGSVFGFAQGGAFSQGRVMPFAKGGVVSSPTSFPMRGATGLMGEAGPEAILPLARAADGRLGVQAGGGRVVNVVMNVTTPDAAGFARSQGQIAAQVNRRLARGSRNA
1826889..1827521                   PHAGE_Paraco_vB_PmaS_IMEP1_NC_026608: N/A; RCAP_rcc01695; phage(gi764162043)         9e-58               MAFHEVRFPANLSFGSVGGPERRTEIVTLSSGHEERNSPWAHSRRHYDAGVGLRSLDDVERLIAFFEARGGQLHGFRWKDWADFKSCPASRAVAHEDQLIGMGDGVTTAFQLVKTYVSGGQSYLRPIVKPVEGTVKLGIAGDHQAEAVNFAVDHATGIVSFNEPPPQGARVTAGFEFDVPVRFDTDRIAVSVQSFQAGDLPQVPVVEVRI
1827521..1828411                   PHAGE_Paraco_vB_PmaS_IMEP1_NC_026608: N/A; RCAP_rcc01696; phage(gi764162044)         5e-52               MAYPESLKAHLQGGVTTLARAWALARADGRVLGFTDHDVVLRFDGISFEPGSGMTAKAVLQGTGLSVDNTESYGALSSEAITEADLLAGRYDGAAVTVWLVNWADPAMRAVIFRGHLGEVSRGAGAFTAELRGLTAALGQEQGRIYHPRCAAVLGDGRCRFDLTKDGYALEAALGGVDEAVVLRLAEGAGFEDRWFEKGRLVVLDGAAAGLIGVVKNDRLQADGSRLIELWQRLGANPVAGDRVRIEPGCDKRAGTCRLKFDNFLNFRGFPHIPGEDWMVSYPVQSGTNDGGSLFR
1828408..1828860                   PHAGE_Paraco_vB_PmaS_IMEP1_NC_026608: N/A; RCAP_rcc01697; phage(gi764162045)         9e-22               MSAVGLRAVAIARDWIGTPYRHQVSVRGAGTDCLGLLRGVWRALYGAEPELVPPYTADWSEPAREEVLWRAAARHLVALPVGAGPERPGEVLLFRMRHGAVAKHLGIAAEIGAGASFVHAYTGHGVVESPLSEPWARRIVARFQFPEGGR
1828861..1832775                   PHAGE_Paraco_vB_PmaS_IMEP1_NC_026608: N/A; RCAP_rcc01698; phage(gi764162046)         0.0                 MATILLSAAGAAIGGGFGGTVLGLSGAVIGRAVGATLGRVIDQRLLGSGSQSVETGRVDRLRLSSASEGEAVGRLWGRMRVAGQVIWATRFFESASVEKSGKGVPRATVTSYSYSLSLALALCEGEILRVGRVWADGSEIEVSGLNMRVYRGGEDQLPDPKIAAVEGAEAAPAYRGIAYVVLEDLQLAPFGNRVPQFTFEVVRAAQGALAEAEPDLTRGLRAVALIPGTGEYALATTPVYLATGSGVTATQGVANQNAPGGQTDLVAALERLDEELPNCGAVSLVVSWFGDDLRCGACDVKPKVASVAEEGANMPWRVAGLERAGAEEVPRLSGQSVYGGTPADAAVIEAIAALRAAGKAVTFYPFILMAQLAGNGLPDPWNPGSAQPALPWRGRITLSVAPGRAGSPDGTAAAEAQVAGFFGAASPGDSAIAGGEVVYSGPEEWSMRRFILHYAHLCQLAGGVDAFCIGTEMVALTQIRGPSNSFPAVAAFRQLAGEVKAILGPGCKIGYAADWSEYWGYAPGNGERFFHLDPLWADENIDFIGIDNYLPLSDWRDGADHADAGWGSIHALDYLRSNIEGGEYYDWFYAAPEHRAAQIRTPITDGDHDEPWIWRAKDLRNWWLNDHHERVGGLRSEVATAWVPQSKPIWFTEMGCAAIDKGTNQPNKFLDPKSSESGLPHHSDGRRDELIQMQYLRAMTGYWGEAARNPVSAVYGGPMLDMSRAHVWAWDARPWPQFPLNTALWSDGENYARGHWISGRAVAQPLASVVAEICGAAGITEIDVSGLYGLVRGYTMTGDQTGRAGLQALMLAYGFEALERDGQLVFRMRDGRVAADLAAADLALGEGEAVVETVRAAEAEIAGRVRLAYVEAEGDFEVKAVEAVFPDAAAGAAAGSELSLALTRAQAQGIVGRWLAEARVARDTARFALPPSRGHLGTGDVVRLDLPEGKRRYRIDRVEQAGLIQVEAVRVEPGIYAPADEVEDPASLRPFAAPVPVTAVFLDLPLMKGDEDPVAPHLAVTATPWPGTVAVWSSDEDAGYALNASLGTRAVIGQTLTPLFRARPGVWDRGAALRVRLASGALDSATAAKVLNGANAMAIGDGSSENWEVFQFAEAALVEGKIWDISLRLRGQLGTDALMPEVWPEGSVVVALNGAPEQILLPSAARGLARHYRIGAAVRSYDDPSFVHRIEAFAGAGLRPFSPCHLRAEPGASGWAFRWVRRTRIDGDSWQGYEVPLGETAELYLVRVLEGTAVKREVTVGEASWSYPAALQAADGIAGAFTLEVAQVSDVYGPGLAARITVGA
1832779..1833195                   conserved hypothetical protein; RCAP_rcc01699                                        N/A                 MRPILIDDLLIAARAVAALSAPERPARLAQWLREAHWADLYRKRLARAHPLWGNGSLMGRALREAGGRGVRPDRAEIDDLAEVIAAVRIWRARGLCSAGERLYLRGQACVRLTQSQGESHVQNPCEGRCHRSGVDADL
1833137..1833955                   serine O-acetyltransferase-1; RCAP_rcc01700                                          N/A                 MSKTRAKVAAIDPVWMRICEEAHDAVGQEPLLGALIHAGLLHHATMEKALAYRFSLKLASGEMSEQLLREIADDAYGSDPDLGQAARADLVAVFDRDPACHRFLQPILFFKGYQALQSYRVAHWLWRQGRKDMAYFVQMRTSEAFGVDIHPAARIGRGVMIDHAHSIVIGETAVVGDNVSMLHSVTLGGTGKEEQDRHPKIGNGVLIGAGAKVLGNIHVGDNSRIAAGSVVLADVPRCKTVAGVPAKIVGEAGCAQPSVNMDQQLRGCDCEG
1833964..1834623                   phospholipid/glycerol acyltransferase; RCAP_rcc01701                                 N/A                 MAGLTRIKALPYRIVTKLAGDAISLFARILTAPRAIWSGSEPRPGPRVYYSNHTSNADFVLIWTVLPPVLRSRTRPVAALDYWLASPLRAFAGRDVFRAVLIDRRPEARTEDPVTQMVTALDAGSALILFPEGRRNTSEAPLLPFKSGLFHLARQRPGVDLIPVWISNLNHVMPRGQVIPVPLICTVTFGAPIRIAPDEAKERFLTRAAAALAELGAAR
1834620..1835558                   phosphatidate cytidylyltransferase-2; RCAP_rcc01702                                  N/A                 MTGLAPALVGLGGILLLAAILGQLLREAIAPDGLHPLIETMNARIAAWWAFAVLMALALLAGKAGVIGLFLLVSFSALREFLTLTKKSVADHWTLAASFFLVLPAQYLFVATGWQSLAALFVPVHVFLILPVISALQGRPEQFLARVAETQWAVMICIYCISAIPALLWLPIPGFEGRNPLLIAFLILVVQTSDIAQFAISRGVGRRRIAPALSASKTWEGTAGGMAVAVLVGGALSWLTPFTPVQAMGVGLVLALMGGVGDLVMTAIKRDKGTRDWGHLIAPHGGFLDRLDSVIFAAPIFYQLVRVFWASP
complement(1835612..1836868)       PHAGE_Macaci_herpesvirus_1_NC_004812: large tegument protein; RCAP_rcc01703; phage(gi30984464)     2e-06               MAVEILMPALSPTMEEGTLAKWLVKEGDAVKSGQIIAEIETDKATMEFEAVDEGVIGKLLVAEGTSGVKVNAAIAVLIEEGGSAEVAPVAKAAAPAPVAAPAVATPAAPVVPKAAGARIFASPLARRIAADKGLDLAAISGSGPHGRIVKADVEGAVAKPAPAAAPVLVAAPAPAPVSAATVAKLYEGRAYTEIPLDGMRRVIAARLTEAKQTIPHFYLRREVRLDALLSFREELNRQLSARGVKLSVNDFIIKASALALQAIPAANAVWAGDRVLQMQASDVAVAVAIEGGLFTPVLQDADTKSLSQLSAQMKDLAKRARDRKLAPHEYQGGSFAISNLGMMGIESFDAVINPPHGAILAVGAGVKKPVVSASGTIEVATMMALTLSVDHRVIDGALGAELLAAIVSNLENPMAMLA

#### region 3 ####
2134380..2134395                   attL                                                                                 N/A                 GATGACGCGCCGCAGC
2139077..2139988                   PHAGE_Rhodob_RcapNL_NC_020489: hypothetical protein; RCAP_rcc01981; phage(gi461474958)     4e-36               MSLMTFPGGRVVPATVLADLAVRHLTGTADPAAIRALGARDRAQFRFWVEVLDWALTTKAVARSELWARRGGAGGPLDVVLSVTRMQALAQACVMARAAAPQSCGPEIAAAPARGAALRFQPVAMVPKGAEGFAAEPAGYRGRDAVRRADLFDKMDRAAQRRGQAAPFAPGQVLAGRSYAALAEFVSAGGVKCSSLEGRLGGGGAGGLDWIERHAQAAARLARMQARIGPGAALSVRRVRPSKRAEEGGARTIADRALVDGFCLQGQSLGDVLLAHGWAKSGQNIEVLRKALAAALERMRLCT
2140111..2140485                   PHAGE_Bacill_phi105_NC_004167: hypothetical protein phi105_50; RCAP_rcc01982; phage(gi22855043)     9e-20               MAIRKLCSAPGCEALALPGGSRCPEHLARDRERKAKAARSAEATRWHALYHDPRWRRAAAAFLAAHPLCADCAELGVIEAAREVDHITRHRGDARAFWDRTNWQPLCKRCHSRKTAREIWHGAD
2140608..2141048                   PHAGE_Mycoba_Porky_NC_011055: gp5; RCAP_rcc01983; phage(gi194303301)                 7e-06               MRGAKGTLRIVTPMKGEDEAIPAPPDFMSADAREVWLRLAPQLVRLKRLEPHYHELFAGYCEEVAVYIAMTRDIGANGVTYETGAGRNGNQKRTRPEVHLRKFALEGMIRLGALFGLSPIDEKRLGAASQGDLFEDLMRAVNAPSA
2141032..2142705                   PHAGE_Burkho_KS9_NC_013055: terminase gp2; RCAP_rcc01984; phage(gi255033734)         3e-89               MRHPLDHPVSRYATDVMEGRIVAGELVRLACARHLRDLDTGAERGLYFDCAAADRIINFARMLQHTVGPMAGKPLELQPWQVFRHGSVFGWKREGSGVRRFRSTYHQVGKKNGKTTDTAVPMLFTQLLDGEAAPQGFCAATTRDQAGLLFKEVGRIVKRSPVLCRMMQTMRHEIVTPRVDGVIKCLSRDGDSSDGINPSFLARDEMHRWTDRELAETIVESMIARAQPIDWVITTAGHDRHSLCGELRGYAEGVLRGAITDDAFFGFVAEPPADCDPLDPAFWPMGNPNLGVSKPIGKMHEAASKAAAIAASMPNFKRFHCNLWTEGEQMWIARESWDQGAADAPFDPRMLYGRDAWVGVDLSNKIDTTAIVVAVPLDGLIYLIAYTFLPAGPKGFIVRAQKEKREYVAWRDQGWLEVHTGGAIDEAQIEARIGWIAKTFAVQEIAYDPWGMKYMADRLAKRRLPMVEHRQGFASMSNPMKRVEELVAQNRLRHGGNPVLAWQVGNVHRDEDAAENIKPNKKRSTGRIDAAVAMIMAVGRAAAGERRRKQARGVETL
2142702..2143982                   PHAGE_Rhodob_RcapNL_NC_020489: HK97 family portal protein; RCAP_rcc01985; phage(gi461474962)     9e-26               MNLRGLLGLGARATLPAAARIEPALSGMAAAGAAALPVSQDAGWREFGIAGASRVRSLPRVTPDLAQKHATVVAACTVIAGDLAKLPLGVFQRAGSGREIRLRDHPLDHLLNAEAAPGVPAHVMRFAIGYAFTLRGRGFAFAPRDGAGEVTLIEAIRPDHCTVLRAGRERYYEFEDGAQVLRRVSGRVMAHLRYMAEDGWTGRSPIEVAAETLGIALARQEAAARLAGGKGFKAVAKLEDFGADDETWQRARARLKAAMAEDADEGVLIIGQSDDIKSLGLSAADLELLASQKFDREQIAALYRVPPAKLQMLEYGVKANGEQQALDYKAECLTHWGRFLESGLGQGLLSAAERRAGLFLRHQYDALLMATTKERYEAITKAVGGPILTPNEGRAIEGKDPIAGGDVLYPPPNMTRKDGGATDKEG
2143986..2144897                   PHAGE_Rhodob_RcapNL_NC_020489: peptidase S49; RCAP_rcc01986; phage(gi461474963)      7e-24               MGRTVREVLAAGGGLMALDTARAAELLATAWPAAAAAAEPQASAGDLTRYTREPGLAVMPVRGLLTPNSALLERYLGWATYRGIAEACADLAADDAVSAVVVEFDTPGGYTLGIEDAVTALRDLAAVKPVHALAAPLAASAGYWLASQARELVMTPRAAVGSIGVAVTAAANVAPGAASGVQLFDFTSRHARAKWPDPATEDGKAEIRRGLDRTEARFHAAVAEGRGIAPEDLAARLSVSDDPEDGGAVFEAAEALARGLADRIETRAAFYARLRAAHAPAPRKGLARGARALAAAARAKARL
2145033..2146376                   PHAGE_Rhodob_RcapNL_NC_020489: HK97 family major capsid protein; RCAP_rcc01987; phage(gi461474964)     4e-61               MTIDDLRRARKAAADSMSERAEALAALEAAETPDAAAISAAETAFETAQGAFEAADKQVKRAEAVEAAKAAAAGPGDTDPGATPGANLGAGAAAGAGAAAVPKDPAHKGIEVGLIVGALAAQKGDLGRAVAQLDRAGFGQVAAALNATDATAGGVTVPRPLAADLIEMLRPRVVMRRAGARVVPMPAGQLRKARQAGSASAGYGGETVAPRASAPGFDAVDQSFKKLRALVPISNSLLSYSSLQMGALVRDDLLKVMGAREDLAFLRGDGTNEAPKGARNWIPAGHWLGAVAGTDALAIDKALRKLVSLVEDANILMVTPGWIMRPGAKNFLAALKDLHGNALYPSIDARGELMGFPIHTTTQLPNNLGAGANETEVMFADFSYLVIGESGLLRIAQSTEAAYLDANGEMQSAFANDQTLMRAIAEHDFAPEHEVAIAGLQGIGWAL
2146431..2146991                   PHAGE_Ralsto_RSL1_NC_010811: unnamed protein product; RCAP_rcc01988; phage(gi189427106)     4e-08               MARLVTVRFLRGSAPYNTGEIAGFEAQVARALIASGAAEAVKAAPLAPDPAAGAGTRQRVVLTFLAAAPPYHAGDVAGFDPLEAAALVARGKAVPLTTRTGAGEEPGEDEACDTEEPGDNPAADPGDDPGADCPDDGIDDDAAEPDFLLVDHDDDGNDHDHDDDGAAEDLDDDGEDGAPPVQGRAG
2146991..2147923                   PHAGE_Rhodob_RcapNL_NC_020489: phage head-tail adapter protein; RCAP_rcc01989; phage(gi461474968)     5e-13               MRVLGPVPGAVSVAEFKRATHMDEGTEDDAALAACLAAAQSLVEQATNRPLGPREVEITLEAVPGLRRWWFPCAPVLSVAQVVVETETGAQAFDPARWRLRLAHDEPQIDFAAGALPSSAAPCPVSITATVGADPESPALLPLRQAIVLIARDWHAAGITIAGEAASPGALSFGARAMLRARPLSAPARDGVRAFGGLRMGERLDTRVTILRPRIGDDGLSRCFTGWEELATLWASLRETAGDEAAAAGQIETRGGARLRLRASRRARQITAADRVRARGQLWEIRGICAPAAGLIELSLAAIMIGKAAG
2147920..2148423                   PHAGE_Tetras_SI1_NC_020861: hypothetical protein; RCAP_rcc01990; phage(gi472342243)     7e-16               MTGTVKLEGLRDLEQALAQIEKTATAKAVMRRALKTAARPVADLAAALAPEGPTGKLKRSISISTKLSKRQQQANRKLQAEGKAAVEMFLGPDYKQAGNHAHLVEFGTKPHRNRGQFAGTQHPGTAPRPFLRPAWEAEGRPTLDRLGKTLWGEIEKAARRAAAKEKG
2148423..2148572                   conserved hypothetical protein; RCAP_rcc01991                                        N/A                 MEQEKAHPDDVVKLLADLAAQHGYRLVGVELVARKPLGAALPRHSYRIF
2148576..2148944                   conserved hypothetical protein; RCAP_rcc01992                                        N/A                 MEESFRAALLASGAVTALTGDRIDFGANPQDTACPRLVLWTISDTGGLLLSGPDGISRGRVQVDCYGESYGAAKRLSRAVRAVLDGYSGGGFQGVFHAGTRDSQDSEAPFRVSLDFITVFTS
2148955..2149395                   PHAGE_Strept_phiSASD1_NC_014229: gp14; RCAP_rcc01993; phage(gi298103499)             9e-06               MANSQIIAYGATVERSTDGVAWTAIPGCKGIAIPAPSTDYIDATSLDSPNGFKEYIRGMRDAGEISVPCGYTAAGYEQQIADSLRDEPVYYRTTLKPAPGQKTGDVFQFRGFPTPQVEGNDVTGLIAMTISIRATGNVTWTKGTKA
2149401..2149757                   conserved hypothetical protein; RCAP_rcc01994                                        N/A                 MTSLRGAVPFAGERYFRLSTNALVRYQDAAGETLLEAMAALEQSPGDTRRIRRMVWAALSHEGLTEEAAGDLMDEIGQTEAARLLGEAIRAAFPQAGAPGAEAADAGGNGASRKKRIP
2149835..2150071                   conserved hypothetical protein; RCAP_rcc01995                                        N/A                 MILRGAAAQRRAEIETARALNHQLAGLVAFAVHDPQHLPEFRPDDTAAATAATAQGAREVDHERVRGALIAMALRPGP
2150122..2153001                   PHAGE_Pseudo_vB_PaeS_PMG1_NC_016765: tail tape measure protein; RCAP_rcc01996; phage(gi374531664)     3e-56               MSASAVIGALRVNLGLDSASFQKGVARSTASLGTLKGAAMAASAAVSAIGAAIGGPALAAIVTAAARSAREITRLSQVAGASAQELQHWSFGARTVGIEQEKLADILKDVNDKVGDYLSTGGGAMADFFEKIAPRVGVTAQAFRDLSGPQALQLYVSSLEKAGLSQAEMTFYMEAIASDSTLLLPLLRANGAEMARLGESASSFGAVLGTDAITALRAAERALDDISVVLEATRNRIAADLAPAVEAMARAFVNAMREGGFLRGVIDGLMAALPHLTAYAAAFTAGLIAWQAAAIAARLATMALSVSMAGLRAAIAATGVGVLVVAMGELGLAILDAVRKAGGFAAAWYKLKAKFFEVLRDMAGGWVEFTWALADGMNDLFGTRLMGADAGITQTLRDLQIGAEDAAAAAQEVATAATEAEVTLTGLGSAGSGAGKKLKKGLTEAQKAAQEFADALRDGFRSSVEGAVDWMLDGFQGGFKGLVSLARDALKQVVALFLKNRITLSLGLGVSGGAATGAAAGAAVSGAAAGGFAGPLGLLGTAGSFLGAIGSGAAGLGTALFGAGGGLGAAGTYLSSVVGSATSSLGPFGAAIGAALPILAGVGVVFSFFKKKVTQLDAGLRLTVTDMDTLVETFSKTKTSRFWGLSKKTRETFTEAGAAIADPIEAAVAGIVGGVADMADTLGIAGRDALKGFSTQIKISTHGLSDSEAQEAIRAGFTQLSDELARMILAAGEGVSGNLSAFTSAFARRGESASETLTRLSSALATANAWLDRLGKTAYDTSLAGADAASKWAGAFGGLEAMSEAVGSYYAGFYSPAERLAQAREELSQALAGLGIDALPGSRQAFRQLIDAAFASGDSDLAAKLIQLAPAMAEITDQAQALTAALKDLDTQSLYRSGAEALYAATSEGHRRRLTGADATVQGLLAEVVRAIREGDINNARLTARLLAVQERMSLDPAR
2152998..2153936                   PHAGE_Salico_CGphi29_NC_020844: hypothetical protein; RCAP_rcc01997; phage(gi472340191)     5e-15               MKILTPIAVTDATLISCSIPETDFPRWNAQTTYPRGAFVISPATHTVYRALQGDNTGHDPDLEQAALADPLIDDPDPVFWQVIGATNRWRLFDGKPSVLARAAEIIRVTLAPGVAVGGVAGFGISAAEIRVTMTDAGAVVYRRAIAMQDETVVSDGLGYYVEPITELSEFVLTDLPPYAAAQITIEAIRRGGQVSVGQIVLGPVWALGRPVIGGTGFQGVDFSYVKQDDYGDLTTVRRAATRLSTFETCLPNARLLGFDTRMRSLRGGTAAVWIGSDDPRKAAINYGFYRSYRAAYQTDAWSLISIEVQGIV
2153936..2154880                   conserved hypothetical protein; RCAP_rcc01998                                        N/A                 MAKPAKPTVPPPPLRSNPETFSARMEASLLFWKTFAEYLDALGDHAETQADAALAAALAAGAGTGLALRGNGGKLMAVNAGATALEFLTASGAGKAILANASAAGLALASDADAAAQRATLGLGTVTALAEAVTDLSAITRSGWNRFAAAQTANTPFATGAGMVLTIFYDGSAAVQLVWGHNKGESDTGQWIRWRAASTWGGWVRLHGSQTEINGLIGALALGVAQSWQDVTAARLAGTNYQNTTGRPIAVSITTGGTTANTALYLGVATPANILIAATGTGSTLRIMSHQAIVPAGHYYRFEGAAPATWAELR
2154880..2155374                   PHAGE_Pectob_ZF40_NC_019522: putative tail-fiber protein; RCAP_rcc01999; phage(gi422936706)     3e-10               MEHGFFHPAHGYWQTTGTPTPEIRAAYPEGTVEVPLRPGADHLWTGEGWEPAPARLSVDQALANLKAARDAAIARGIEVDGLRLQTDDLSQSRLTAAALAAQLDPTLTLRWKLATGEFVALSAPQIIALALAVRAHVQACFDREADLAAQIRAAADPAAVALTF
2155436..2155756                   PHAGE_Rhodob_RcapNL_NC_020489: hypothetical protein; RCAP_rcc02000; phage(gi461474983)     2e-43               MSDARGLVELVDAIWGGAVTTMAAALAGRLMWHSTEVRARKRRFLSRELLWELPVAVGMAIIGEAVAAYFELGRTVTTGVVATLAYLGPRGAQVALTRVFFHNKES
2155758..2156432                   PHAGE_Rhodob_RcapNL_NC_020489: peptidoglycan-binding protein; RCAP_rcc02001; phage(gi461474984)     1e-15               MTTDWRAAQLRLRALGFEPGPIDGLCGPKTKAAITAFGRSRGLSAEPGFGPVIAALMGADAPCPDLPWMAEALRLKGLHERRDTTRLRAWLDPAAGAIDPRAMPWCGAFVASCLRAALPGVILPDTPLAARAWSRFGDPVAPVFGAVLVFWRGAPSGWQGHVGFCRGEDAGAYHVLGGNQSDAVTVTRIAKTRLLAARWPAGVPVTGRPVRLTTKGLALSSNEA
2156451..2156798                   conserved hypothetical protein; RCAP_rcc02002                                        N/A                 MTDTLLATILAQIVLPILATITTALIGWAAAKLRARWGIEIEAAQREALHQALMTGAQLALTRRGRRDDGRDLDLLARDAVAYAQTSVPDAIQALAPRDGVLKNLAAAKIAALSR
2156979..2157368                   PHAGE_Rhizob_RR1_B_NC_021557: adenine specific DNA methyltransferase; RCAP_rcc02003; phage(gi514231187)     2e-34               MIPVAPVAPAAPWLGGKRNLAKRICTILDETPCRTYCEPFVGMGGIFLRRRARPRAEVINDAGRDIANLFRILQRHYPQFLEILRFQLTVRSEFERLLATRPDTLTDLERRIQDRLQRFGDCPMNYAVP
complement(2157353..2157628)       conserved domain protein; RCAP_rcc02004                                              N/A                 MDLFFKATEYETLQASWLKVQQNGGAAGGDGVTIATFAQGATASLRDLALALRAGGWQQGPCRRVDIPKRKGGTRRLMIPPIADRIIHGTA
2158410..2162267                   hypothetical protein; RCAP_rcc02005                                                  N/A                 MQIGKVQGRTISEFGDPAGGLKRKISTDGKNRKELPAHLSSDPKALIGQWISGIDKIYRKPDSRKSDGKAIHSPTPSKMQFDARDDLGEAFWKLVSEAGLAQDSDYDQFKRRLHPYGDKFQPADSGAKLKFEADPPEPQAFHGRWYGAMSKRGNDAKELAAALYEHLHVDEKRIDGQPKRNPKTDKFAPGLVVARALGIESSVLPRGMARLARNWGEEEIQTYFVVDVAASVKEVAKAAVSAAQAFDPPRQVSGRSLSPKVGFALAEHLERVTGSKRCSFDPAAGPSVLALHDEVKKTYKRLCARGKNAARAFPADKTELLALMRHTHENRVRNQMVRMGRVSEYRGQQAGDLAQSHYWTSAGQTEIKESEIFVRLWVGAFALAGRSMKAWIDPMGKIVNTEKNDRDLTAAVNIRQVISNKEMVAEAMARRGIYFGETPELDRLGAEGNEGFVFALLRYLRGCRNQTFHLGARAGFLKEIRKELEKTRWGKAKEAEHVVLTDKTVAAIRAIIDNDAKALGARLLADLSGAFVAHYASKEHFSTLYSEIVKAVKDAPEVSSGLPRLKLLLKRADGVRGYVHGLRDTRKHAFATKLPPPPAPRELDDPATKARYIALLRLYDGPFRAYASGITGTALAGPAARAKEAATALAQSVNVTKAYSDVMEGRTSRLRPPNDGETLREYLSALTGETATEFRVQIGYESDSENARKQAEFIENYRRDMLAFMFEDYIRAKGFDWILKIEPGATAMTRAPVLPEPIDTRGQYEHWQAALYLVMHFVPASDVSNLLHQLRKWEALQGKYELVQDGDATDQADARREALDLVKRFRDVLVLFLKTGEARFEGRAAPFDLKPFRALFANPATFDRLFMATPTTARPAEDDPEGDGASEPELRVARTLRGLRQIARYNHMAVLSDLFAKHKVRDEEVARLAEIEDETQEKSQIVAAQELRTDLHDKVMKCHPKTISPEERQSYAAAIKTIEEHRFLVGRVYLGDHLRLHRLMMDVIGRLIDYAGAYERDTGTFLINASKQLGAGADWAVTIAGAANTDARTQTRKDLAHFNVLDRADGTPDLTALVNRAREMMAYDRKRKNAVPRSILDMLARLGLTLKWQMKDHLLQDATITQAAIKHLDKVRLTVGGPAAVTEARFSQDYLQMVAAVFNGSVQNPKPRRRDDGDAWHKPPKPATAQSQPDQKPPNKAPSAGSRLPPPQVGEVYEGVVVKVIDTGSLGFLAVEGVAGNIGLHISRLRRIREDAIIVGRRYRFRVEIYVPPKSNTSKLNAADLVRID
2162724..2164274                   hypothetical protein; RCAP_rcc02006                                                  N/A                 MLSPQIASHPVAEHSLCVFYELDGIDPAGWTGPRFGNLTRNPGQGIPADQKAALQGRYAEDALWEADETLSAGDDFHAHLQELLSGARPDLVRFHRLTERGHRFLSTACLYEKTTPPADRIAKRLRLSLTSAAKERIAAAGVVPGELGLEVESLSLALFMTAQGLALCRFVVDREDGAPLSAVELLEATVALSRLNEVRWIDKKAKTPIEAPAFSMAALIGQMVFGSRSQAEVSRRLSSHAMVRFDAILPITDRDRYALMLARHYTTDYQLSPDIGRVEWVRDFETVRHAIALEGAATVIGPTEGAPTLTEFLRNFRTSTFDRHYLPIAILALHERAFLVARTAASIMSAAEMLDAQKSLRRLAELREAALVLRLCYRFSEQSHISMHNAVNLAWRKVLRLDEMLAELDDSIRDIADHLERIHRRAQERKFAGVAIMGGAIIAGFSTFSIVKDLYDLFKASQTYGWIGVCVGGIALIGVAAFAHRKSAVFGALDQDCSKNYTVHAMLEKMTRRSKD
2164250..2164265                   attR                                                                                 N/A                 GATGACGCGCCGCAGC
complement(2164487..2165695)       PHAGE_Sulfit_pCB2047_C_NC_020856: integrase; RCAP_rcc02007; phage(gi472341771)       2e-93               MGARDKLTAVKIRAAAPGRYGDGAGLYLDRTEDGGKWLYRYTIAGRRRDMGLGSLDAVTLAQARRERDRWAAVLASGRDPISERAREREAAATREDPSLSDLVDTVFGAIKHTLKGEGEAGRWMSPLRVHVLPKIGARPASSLRTADFVRVLQPIWRMKPTVAEKAYSRLNLCFKKGKRIGYAVDPDTLAAARELLGDLHIEPEHIAATRWQDAPVLFTRLAGDTSGLMCLRLLLLTAVRGDAARGARFNEIDGSLWIVPKERVKGRLKAATDFRVPLSSQALAIVAEARRLSNDPETGLLFPGDRGEPISPNALLKAVNKIGEAGRPHGFRTTFRTWVQDTLDGSHDLAAEAALGHVIGNKVRRAYARSDYLDQRAALMQRWADYVTGESVQVVQLRPSAG

#### region 4 ####
2499136..2499152                   attL                                                                                 N/A                 TGGTCGGGGCGGCGAGA
2499272..2501080                   PROPHAGE_Escher_Sakai: putative integrase; RCAP_rcc02326; phage(gi15834496)          2e-25               MARISHLIRRGSAYSARIRVPLDLVETLGKRELVKALGTNDEAEAKRRLYPVLSNWQREFDDLRTRKALVPADRDHAVWDHYTTTLARDEADRAALPSPAQIEAEKTKLVEKAQRGEIKDAEPLTILDATLDLQVMQRAGEVSAHAREAKLKDMRKHLIEGNTALIAHEVNAYLHNNRLLVEPGTPDWISLARHMMRAEIEALQRTLERDRGDYTGHPSDPIVKPPTGGRREFAKPGETIMEVFETFASENPNRVTPDRLNQIRRDIGIFVEVVGAGFPVHAIDKMAVRDWKALLVKYPIRATEVKDFKGMTIRQIVKANEKLGRPKLSDRTVNRYLSSLGAFCNWLVENGYLAQNPVSRMALKKEKNSKTFTFTSDQLNTLFKSPLFTGAQSDKEGEWRYISRPGKVLIRDHRYWVPLIMLFSGARNGEIGQLATSDVRELHGHWIFHITTEGEQTEQGKSVKTEGSMRVLPIHPELIRLGFLQYHAERVKAGDKQLFPGAKRNERGQMMAEFSREFGKYLTRIGLKNGRGLSLYSFRHGATDALRRAGYLDSQFGFILGHTEASMTGRYGQMPQGMLQQRVELVNSIAYPGLSLDHLIPQ
2501158..2502363                   PHAGE_Burkho_phiE125_NC_003309: putative portal protein; RCAP_rcc02327; phage(gi17975165)     1e-43               MFQKFLSAFQKKAVGVSTPAALPLFGLAPTLTGKTVTTESALRVPAVACAVALIAETVGSLPAKLFEKDGRASVTDHAAFSLIHDEANPWTSAEALRVQLTTDALLRGHGFALVVRNATGAPVELHRLEPHMVQVETDDFGEPAYLVQLADGRHRYPFTDILHVSAFGGASPITLGREAIGLALAFEEHIAKLFANGGKPGGILKTEKTLGDEAKAKLATSWTAAHGAGRSGGTAILDEGMSYEAVTMTLADTQFAENRLEQIREIARAFRVPPTMLFELTRGTWSNTEEMARQFLQVTLKPWLASWSWAYARCLLSPEERRRLYVEFVTDDLTTTDTAARAAAYGQYRSMGAMTANEVRAGLNLPPRADGDTLQNPYTTTGAAPAVDPVADPAPEDAPHD
2502356..2502676                   conserved hypothetical protein; RCAP_rcc02328                                        N/A                 MTDRITLRAFFGDAERAFTLTDPMLTELERLTGLGTGALYAQLVNMAFPVQVLAQVIRLGLIGAGMTPEEAKHLCAAYAENRPLAEVFPLAFAILDARWSGVEVKP
2502673..2504184                   PHAGE_Azospi_Cd_NC_010355: Phage major capsid protein; RCAP_rcc02329; phage(gi168495136)     2e-48               MTDRLEIKAQLAVTEAGEITGIAWPFGSADRVGDVIVKGAFTAPAALPMLFAHDQAQVIGVWDRIAETEAGLTVKGRLLIDDVERAREVRAMVKAGAVSGLSIGFVTKDAKREGRGRRITALELHEISIVAVPAHPGAQITSFKSTHCNSEFTQMEQEDIAAQAPQIDTKAFDEIKARLDKLEAKTNRPSLAVTGVQSPIMAADEVKGFVHYLRTGDKSETKSLAYGAPSTGGILAPETVSTAIIEKIAEQSPVRGLASVISMSGPLLQLPRLVNEVQPAHVTETAARPESEPTFEQIDLKPHEMAVIVPVTRVLLEDAQVDLNGYLSAHIARRFGQLEAQWFVKGNGTTAAEGVLTATEVQELDAPTLTADTLLDLFYAVKTPYAQNGAWMMNRKTMASIRKLADLDGQLLWQSGLAAGQPSLLLGRPVYEAPDMDDATTGKTPIVFGDFASGYTIADHTGFSVMRDDYTGATNGIVKLHARRRVGGRVTPGEALVKLKLAA
2504188..2504826                   conserved hypothetical protein; RCAP_rcc02330                                        N/A                 MTPLARNEEVTLHHGGWAVVLRPSLRAAMTLERLHDGWPGLLLGLGQFRLQTVQAIIRASAVERNAAEALLASFAAAPISAVKEAVTAPLGALLTLFLAPMTETAETAETATPAAPKPWADAYSELYRFGTGWLGWSPAETWAATPTEIAQALDGKLAHLIALNGDEGNAGPSGPAGPGPDAYTPARLREIEELGFDPAFDREGLRRLKAMT
2504829..2505173                   PHAGE_Xantho_phiL7_NC_012742: P58; RCAP_rcc02331; phage(gi238695645)                 2e-18               MPRPPHICACGRLVPHGERCTCQKDADRARKRRHDAKRPSARERGYTTDWEKERAAFLEAHPCCAICGAVASVVDHITPHKGNKALFWDRYNWQALCKPCHDRVKQRQERAGDV
2505166..2505432                   phage conserved hypothetical protein; RCAP_rcc02332                                  N/A                 MFEAPSRWNPERNLWLEVLYRTVEDATKGPRHVPKPADKALIMREARDYLTRPSRDLAMVCALAGVDMGAVIDHIGRKLAGGRSAAPR
2505815..2506408                   conserved hypothetical protein; RCAP_rcc02333                                        N/A                 MVAKSQRLYSIGHGMAIDQKTTQERVSNIENDSENRMSQFHAWLGIASAGGIVSLSSFAGGSPDPDYTFAQLVPSYICFLFGIIAAAAVVYSLSLSRSKFAEHIACSSNREIANEAIQSIPVIMSYPRSMTEGANGSRDELISKSQRFHDLAERSWSAHRRWSIVSSMSVAISALAFVLGFLWPIYVVVFTEKGLIP
2506600..2506884                   PHAGE_Entero_mEp235_NC_019708: head-tail connector II; RCAP_rcc02334; phage(gi428781817)     3e-06               MPFVTVPELKAQLNLDHDLDDALLSHQIDAAEAHVASFIGAPLTDPLPAAIRQAVLMLAAYWYETRETAQAGGAPFAVPFGVHDILQPHRVWVV
2506886..2507365                   PHAGE_Strept_mu1_6_NC_007967: tail component protein; RCAP_rcc02335; phage(gi93007447)     4e-06               MAELDLNAQAARLARRLEAIPATVLEALRPAVVQAAEDLAATARSLAPEAEGDLKASIVVTPPGAETPAYAEGGGRRVAGANQALVTVGNPEQRHGHLVEFGTKPHVNAGQFAGTQHPGTAAQPFLLPAARLTEDRARRRIARAIGQAVRKAAQGGGHA
2507358..2507780                   conserved hypothetical protein; RCAP_rcc02336                                        N/A                 MLDPALAFQTAVRAALIDAPEVLAHVQPANIRAGSIRPERLPSVVLGDARTEFLGCAAGSQRLARVFLTLHIWAQEDGADTARQIGAAIYGALEFGPKDTAEISLDDWAQPRMVWLRDPQPELTLTHGAMALEAVVRWRV
2507783..2508094                   PHAGE_Entero_mEp235_NC_019708: hypothetical protein; RCAP_rcc02337; phage(gi428781819)     1e-05               MQAGKLQNRIALQRLTETVAASGAVTTTWATYAQGRAELRQAGVSEFLTAATEATTKNAVFLLRWLPGVSVADRILHDGTAWNIVAIAEIGRRRGLELRAVAA
2508091..2508732                   PHAGE_Azospi_Cd_NC_010355: hypothetical protein APCd_gp13; RCAP_rcc02338; phage(gi168495116)     2e-35               MKPAAIFLYELSGKSAEPFAAAGWDCYCIDIQHPGNRTEGNVHFVQADARRWKPTRDMVERCRFFAAFPPCDDLATSGARWFKGKGLHALADAIELFAIAAEWAEFFEVPYLIENPRSTISTYWRKPDHSFDPCDYSRLAPSEHYTKKTCLWTGGGFVMPAKTPLPGPAQANVIRDMKGKGRARANARSVTPTGFMRAAFEANFGATAQAVAA
complement(2508738..2509142)       hypothetical protein; RCAP_rcc02339                                                  N/A                 MRNCLIVFLVLTNAATGYALFQGIDEYERVRTQFVEARQKIAEMESTKTTDFERENYGQECVKWLREEGTKDGKRDGEFYLGRSWKKYGQMVFEVIVPKDQIGRKTGNFLCTFDAQSGMMYSLEGPAQERWMFY
2509205..2509600                   PHAGE_Burkho_phiE125_NC_003309: putative terminase (small subunit); RCAP_rcc02340; phage(gi17975162)     8e-08               MSAIALRGVKPALKPDAEALTKVPPAPAYLSLHAKAEWKRIFPQLIARRIVTRADLAGVEAYCSAVGICRQIEADRTAAGGVIDKTAFGIWNRAAQTARQLASEYGLTPTSRARIGSAAPEDAEDDDPLSV
2509604..2511217                   PHAGE_Entero_mEp235_NC_019708: terminase large subunit; RCAP_rcc02341; phage(gi428781812)     1e-45               MTSQSTYPTWVFDGSPIDDPQGAGERAVQFLRRLRHPASTAPKRAFQLAPWQERIVRRIYGPRDAQGARVVKMVFLMIPRGNRKTSLAAALALLHLLGPERVPAGQIIFAASDREQAGIGFREAAEIIRQDRRLEAVTRLYDAHNAPKAIKSTRDGSALKAVSSDGRAQHGTTPTFVLADEIHVWQGRELWEALQSGMAKRAGGLTVIATTAGRGNEGLAAELYAYARGVALGQIVNPEFLPILFEPDPGADWEDEALWHRVNPGLAHGFPDLDGLRSLARKAKDSPGERYSFEQFNLNRWLGNSRDPLFDFDTYDARVFDDDEEDLEQLPCWLGVDLSRSGDLTAVVAAFHHPDGQVTLKPAFFVPGEELKARADRDGVPYERWRDEGLIRVCPGPIIDEGMVEDEIRDLCGRYDVQEIAFDPHLATRMMQRLYDDGLPVVEVRQGPLTMGAAGADLERIVNGKLVRHDGHPILRQHFASVVAVRTDSGLVKMHKGQKRDRIDGAIASAMAVYRLSLGQSNASAYNAPASSGLFVF
2511231..2513597                   PHAGE_Rhodob_RcapNL_NC_020489: phage tail-related protein; RCAP_rcc02342; phage(gi461474975)     9e-31               MNDLTLPGLIVPVEARIDKLEKALKRASQAQARAARQMEDRARQSVDRMAKSYDGLGAKMAGALGNLPLPGLGVGIAGLAGAGLGAGLGIAAGQVRATVRSIAEIGNEARRAGVAVEAFQRWQYVADQNRVSLDALTDGFKELNLRADEFVTTGAGAGAEAFQRLGFTATDLATRLKDPSALMLEIIKRLQGMDKAAQIRIADEVFGGTGGERFVEMLGRGEAGIAAMMGRASVLTADQIAKADDLDRRYTALTASLHRGWQQAALGAADFAAQVLNIQTGTDRLAASDLFRNRAQAPQILGPGVDKALKDNGQAVADNAKAIGDLLSLYERFGSEADRLAPILTRFGGELNRMGETGAGQSLQDVALAMQTLTGKLDSGEISAADFERQMGDLIKKAQGAFASLGEIDDARFTKVIERLGGLWSALEALRTKAAEARAALPGGAATLDDTRGAAIAEARSGSYENSSPYVLTTSPRPKQPPPLLGETGPVVGSGQGAGGGGRNAGDFAQAVADLEREKAALDAEAAALVTAAAAGRGYAEAVDFARKRAELLTAAQREGKAITPELSAQVDQLARSYVEAGTRAEKAAAKLKKVEEAGKRGAEALTDTFLSVLNGSKSAEEAVADLLLQLAEVQMKQALMGLFSGAFGGFGTWLGGLFGFASGGYTGRGGTFEPAGIVHRGEFVMSKAATERLGVGNLEALHGAALRGYATGGFVGGSTPNAMQALGGAKAGPVVTINAPVTVNATGGTQEQNADLAYQVAKQTEQMMRNIVTEEIIRNMRPGGILR
2514092..2514538                   phage conserved hypothetical protein; RCAP_rcc02343                                  N/A                 MAYMLRLPDERGAQLRQIAEKKNTTVSELITDYIRSEIKAGTIPSNIPGINVAKAGESIAISAPGFEASVPAHKGQTLADLLRKSAALTPSAFEHKKEWLEGIAALSGIKLKRMGAGVRIVSPITGAEYPLASGVAEDLASEIERAAK
2514605..2515285                   PHAGE_Tetras_TJE1_NC_019930: phage protein; RCAP_rcc02344; phage(gi431810859)        4e-05               MCADTTKAPTLSLTPYAGQSDEEIAAWFRWKYPKGKTDKSSGAYAAALYKSRPGRDDPAAENDWYTRLTEAQRAILDDAKRVKGAAADEKKRIEFRDKYKLSDEESRKYWALRDLPPVGGKRVEWDRARDMLRRRKSAKPRQNEDLSKMTPAEREKHRRKQKTEAKQRERARKKAEEAAAALGAPATAVASTQVAPSDEITALLAVLEAAEAAEIAAEREEMARNS
2515624..2516136                   conserved hypothetical protein; RCAP_rcc02345                                        N/A                 MAKSNAERLRAFKERKKEKEKVASLTLDGVFKTPFFETLPPDYDTESQFADSFEFIGLPTPVFNDDLGIEHHTLYSDESAAELFELNRRSLGRAEMMITALNEAAENLAFYVNKYKRTEIKARLAEIEASDLSDPETKRAALKNAARLNKMLEQLDKQVRLTFPQWKVTG
2516246..2516638                   conserved domain protein; RCAP_rcc02346                                              N/A                 MKAHSTNAAHAANKKASGFQLIEVLLYGIACIQSLPKEQQEREKMLEMCKIARLRDTPTLALTLWGIETLIGREIDLWPAGGGFRFDGAYSDEELDQEAAVRAEIKQRKERFEETGALIDAPPSDVIRFF
complement(2516819..2516895)       tRNA                                                                                 N/A                 CGGGGCGTAGCGCAGCCTGGTAGCGCGTCTGTTTTGGGTACAGAAGGTCGTGAGTTCGAATCTCGCCGCCCCGACCA
2516819..2516835                   attR                                                                                 N/A                 TGGTCGGGGCGGCGAGA
complement(2516943..2517413)       PHAGE_Synech_S_SM2_NC_015279: hypothetical protein; RCAP_rcc02347; phage(gi326781863)     6e-09               MRRGLGLTALALWAGAASGADCDRPGLAAALQEQGPAVLCIAGAKGPVRLSVEIADTEAERERGLMGRRDLPPGTGMIFIYPTPRRVAFWMHDTPLPLDMLFIEAGGGIETLHENARPFDDTPIWSAGPVRYVLEIAGGQAAALGLRPGQRVLPLD
complement(2517410..2517943)       PHAGE_Lactoc_bIL312_NC_002671: Csp; RCAP_rcc02348; phage(gi13095918)                 2e-05               MVDEAGAAREVAGRVKWFDAGKGFGFILDGEGGPDILLHANVLRNFGQSSVADNAGIRVLVQATPRGAQAVEVLEISPPETDNRLAPIEDLGETDPEVIAALPLEPARVKWFDKGKGFGFANVFGRPEDVFIHVEVLRRSGFADLAPGEAVCLRVIEGRRGRMAAQITSWEAALRAR

#### region 5 ####
3091373..3091384                   attL                                                                                 N/A                 GCCCTTGCCGCA
3095260..3095958                   PHAGE_Feldma_species_virus_NC_011183: putative sensor histidine kinase; RCAP_rcc02896; phage(gi197322366)     8e-08               MTNALILIIEDEPEIAEILESYFAREGFRVICAGDGPLGLAHHQRLRPDLVVLDIKLPGLDGYEVLATIRRRGETPVIMVTALAEDLDKLQALRIGADDYVVKPFNPLEIVARARAVLRRTLGRAPETLLRLGPLSVDPQAIRAVVETAAGPVPLDLTPTEFRILAHMAAAPGRAFARADLVDACLPEGEALDRTVDSHVSNLRRKLSAAGAEGLLTGVRGIGYRLEAPHGR
3095948..3097042                   PHAGE_Ectoca_siliculosus_virus_1_NC_002687: EsV-1-65; RCAP_rcc02897; phage(gi13242537)     1e-08               MAGKGANLRSQITRAMIGLTLTAFAVVYFGMMAYFFVIYEWLYPDATADESWRLGDTVMVGLVLGFGLLSAALIGWRLGRRILAPLETVAVAARQIASGDFSARAGLPRGSFGEAGDLVADFNRMAERLQQAEAELAYSNSAIAHELRTPLTILRGRLQGLLDGVFAPGPQLYARLIAHVDDLSAIVEELRTLALGTAGQLDLICAPVDLAAEAEAALDALDAELAGAGLVVTRRLAPAVTRADRARLRQAFVAVLENACRYAPQAGLLVETGVAGETVYFRCTDSGPGLSPEGRARAFERFWRAEASRGRSLGGSGLGLPIVRAIARAHGGEALILPDSPGLTVEIRLPCRKVSLSEQDFDDQ
3097032..3098813                   PHAGE_Bacill_SPBc2_NC_001884: ABC transporter; RCAP_rcc02898; phage(gi9630145)       1e-27               MTNDPDTAETYDTLAARHVSLARVLALFAPYRRRIAGVVALMLLAAAIGLAGPFLLRAVIDVALPGQDLGLLLLLVGGMVTVALAAAAVGAWQVVLTARIGQAILHDLRVRLYAHLQSLSLRFFTGTRTGEVQSRIAGDISGLQAMLTETASELGRALSAVVMTAIAIVILDWRLALFVLVIVPGTVLISHRVARLREALMWQRQARAADLSAAVQETLSVPGIILARTMGRGPHLTRRFARLSDDLARLDARAQTAGEGQWMLIGFALAVLPALTLLAGGLLMRSDDPASIGTLVAMIALQEQLLWPFEQLLEIGRDLRKTRALFARIFEYLDTPVEITERPAPVTLERARMRGAIELDHVSFSYAGAARPAVDDISLNIPAGSHVAIVGPTGSGKTTLGYLLARLYDVDHGAIRFDGIDLRDLSFGTLSQMLGVVSQEPYLLHASVAENLRFARPEASDAELIAAAKVAQIHDHIAALPEGYETRVGEGGFRFSGGEKQRLALARTILRDPPILLLDEATSALDTRTERAMSEALDGLARGRTTITIAHRLSTVRHADRIVVMQAGRVVEEGPHETLRAQGGLYAKLLRGT
complement(3098786..3099637)       PHAGE_Rhodob_RcapMu_NC_016165: putative tail fiber protein; RCAP_rcc02899; phage(gi356870896)     2e-88               MSRISLGQYSSAQFEAASWGKTRASVLANAALAPNGTMTADKLVEDTSNNSHFVARTGTQIAAGTSVTASIFVKAAERRWFALVTADSANAFRTTYFDLQTGTLGVVSQGAAGHVAQIVAAGNGWYRCSVTQTQAASGNFNFYPSIASANGATSYPGDGASELCLWGAQLETGAAVSSVIPTEAAGTTVTKGGRASGRGADDRRRKPLPAQPLSGRGALTGSTGALPRQRRSERVRICVLVKIFVRKLFNVRPEADRAQHGPPDAGTEHRPASRAQVPRSSLA
3099659..3100015                   transposase, IS3 family; RCAP_rcc02900                                               N/A                 MSMTMDDSIKRWTAKRKTALVTEIIQGKTTVAEASRSFDLTPSEIEGRVEDAKRGMENSLRANPLDIREHYEKQLQDLQEAYGEAMLELRARKKLAALMERDGVRGERATGSSAAPNQ
complement(3100567..3101367)       PHAGE_Rhodob_RcapMu_NC_016165: putative tail fiber protein; RCAP_rcc02903; phage(gi356870896)     9e-131              MSAPVDQPRYDYSAGKRALLLEASSTNLLPNSAQFDAASWAKTRASVLANAALAPDGTMTADKLVEDTSNNSHFAARTGTQIAGGTAMVASIFAKAAERRWFALVTADSANLFRTTYFDLQTGMLGVVSQGAAGQTAQIVAAENGWYRCSVTQTQAAAGGNFNFYPSVSSANGTTSYLGDGASGLYLWGAQLEVGAAVSSLIPTEAAAVTRAADLASVAVAAGSYDIRRVDAAGTTVTKGVAHPGGAMAIGAGAIHLLSLYPAGAL
complement(3101412..3101543)       PHAGE_Rhodob_RcapMu_NC_016165: putative tail fiber protein; RCAP_rcc02904; phage(gi356870896)     5e-13               MMGLPGCGMGGGVQPLAGYAVGGVMPVMLHDFVTGLPSGRPGP
complement(3101543..3101806)       PHAGE_Rhodob_RcapMu_NC_016165: hypothetical protein; RCAP_rcc02905; phage(gi356870895)     9e-41               MSDLIYDIPDLTGPALSSFAVTPNDAADLPAPVRAVTIGERGGVVKYTAARGGAVCTTGYLPIGQHPIWASRIWATGTTAEGMTGWV
complement(3101816..3103162)       PHAGE_Pectob_My1_NC_018837: YadA domain-containing protein; RCAP_rcc02906; phage(gi410491156)     7e-05               MATPLPSTATLTTPPSSHAAMRTNLANLRSYLAGLLGADGETATALATLGAVLARYRTEAAATTVAVTDRGTFFSCTGIWALTLPSAAAAGAGWCIVVAASGGASITLTPAGSDLIAGLAAYDITAQRAVIVICTGTGWRILRFLPQTLAAKTILGNNAAAGGEAKELTAADVLAMLPVVTALGAGLAPATGGVAGAFLRSDGTWTADNLVLMDATQTIAGTKRFSASGAFVLQPRAADPASPESGQIWQDGTHLKAYISGAVRVLDGQADIPMLVPPAGQYVMTTLGAGGTALEVAAGIANSIDLYPYVPRADLAVAALAVNCVTAVAGAQGKFVVYWSDANGQPAALAVESGTVDLSSTGVKEAVMTGLNMRAGATYWVGFRHSSTASISRWPVTATPCINGGAPSTAARKILRRTRTFGTAAATTWGFNAAEINAASAPAIWLKL
complement(3103164..3106280)       PHAGE_Pseudo_vB_PaeS_PMG1_NC_016765: putative tail protein; RCAP_rcc02907; phage(gi374531670)     1e-44               MRAVCVIVRNPLDPLRSREVAVLRRRVRIRALAPRDVPVVAILNGRPVLRAEWRRKLAEGDQLVFAVLPAGGGGGSNPLRTLLMIALAAFATPLSGMLFANSTWSVLGLSATQIGAAGILMLGSMAINALFPIPRPSQLPSPSPTYQLDAQGNYARLGAPIPVQYGRLLAYPDLAAQPYTEFAGNEQYLYQLLCLGAGDYDIEEIRIKDTAIDAFAEIETEIIPPGGTVTLFPTAVVMSEEVSGQELAGSRAGTYVRSGTTITVAEAAHGRATGQMVMLMFPYPAPAAGVRAVTPTGPGTITVTAPDGSGSGTVTGSWTDTRGEGDVYRTFSGTWVWSGTTITITGPAAPETSIGHPFLSAGSFVPPIATDVDLTFVSLTGPSEVLQIAAMPDDNSWTVTSSLSIGTSGSVIIRDMLGGAVGFVSAPADTITRHIGVDLVLPYGLFAGASGSLETKSLTVTFEARPIDDQGQPVGEWQVLGTRTITDRTNTPIRRSYRFAVAPGRYAVRAVRDDAKSTSTSDGHVVLWAGLRAYLRQPQNFGPVTLIAVRMRATNNLSMQASRQIAVLATRRLPVWTGTGWTAPVATRSIAWAIADAARNADYGPGMADAEIDLDALLDLDALWEAREDRFDARFDQPGTWWDQIQKIARAGRAACFVQGGVLRTVRDGPASVPTLHFSERNITRGSFAVDYLMPTADTADTILASYFDATSWSEQTVRCRIPGSRAPKAAKVQLFGVTGRDQAVRDGTYLAAANQRRRRIVRFDVELEGRMPMIGELISVQHSMPAWGAQAEALDWDPAARLLTVSEPMTFAPGGTHHLGLRCPDGSLCGPIVVTAGSLPEQIVLAEAPDFEIATGPGMERTKISFGVGTTWAVLAKVADIKAKSLTEYSLQAVVEDPSVHTAEDGTVAPPVVRSQLPSRATRPVVRGLIGRRSTDSLTKAVFAWQPAAGAESYQIEMAEGDDPAADDVTWTRVGDTTSTAYACDILYPNRTMIRVRAIGLTAGPWVTTTLGALIPDFWLADAAPFWLGDATAFWST
complement(3106277..3106663)       PHAGE_Burkho_BcepGomr_NC_009447: BcepGomrgp21; RCAP_rcc02908; phage(gi146329933)     1e-13               MKHWAANYVGAEASDCWAFARQVWAERFGLQVPSMPYDPNDPRLVRRAFGEAPQHGWERVEAPREGDAVLMTKGIRPCHIGIWIEAESRGCLHWVERTGVVFTTRAMLRDLGYGVCGYWRHPALGGRA
complement(3106660..3107187)       PHAGE_Burkho_BcepGomr_NC_009447: BcepGomrgp20; RCAP_rcc02909; phage(gi146329932)     2e-17               MPDPAMSAAIREAYASAPVGQVIWETLEIWHPSWTVPIRVVRDRVALDARIEATAARNPGEVVTFVPWAFDFVAPDLSRAAPPQARLEIDNVSREIGRELDAAIMAGDVTLVIWRTYLSGHQLDGPEHLPPVQMELKTVTQGPLRVTATIGFRDLLNAAFPALEYEAETFPGLVP
complement(3107180..3108079)       PHAGE_Pseudo_vB_PaeS_PMG1_NC_016765: hypothetical protein; RCAP_rcc02910; phage(gi374531665)     4e-07               MRRWPDVLPTPSFPGFGLTPYDAVLRTDFDVGAARVRRTTLARADKISCAWIFSDAEMAAFRAWFDDLPVSVAGDSDDLRGWDASAATLTIAPLTGPDGCLATRITQTSAVASHGASKGFPALARDSVGVVVWLSIASAATGHARIRWTDRAGLSIDVTLDLASGAVTDAAAVVSAVTARGAGFWRLRLDLSTGIGAADPRLALIVMASAATEEFGGAGRSIDVCEVMVRERTGFDLFVRSGADGRALGAAGGSAWAEMPIATGGGFSFVETRFVGPWSAQGGAGLEWSVTATVESRNA
complement(3108082..3110400)       PHAGE_Cronob_ENT39118_NC_019934: phage tail tape measure protein; RCAP_rcc02911; phage(gi431811045)     1e-29               MTDMVAAFEIRAKADQAKAEMSQVRGEIEKTGAAAEQASTKGKQLGPALVEPLRNLSPALAPVAPGIRQIGEELDNLPPKVLPLQQEFSNLGTAAGTAGTNVSYMARQLAFQFNQMMQMGSVTGNYVQAIAVQIPDIASSFGFLGTIIGGIAGVSLPLLVNMFTGTSTSGKELEKTVSETNEAFDAYARYAEIAAMQTLEVQQKFHGFASEVQGFSEYMKGVETSEALDGLSASIDPLKGQLLGIQQTFAELTKAQAALENAQSNPMASSEQVLLYADNVRMLQEEADAAAAKLGMSAEEARQLADAMDDVGASTSFVDIAASAGEALAIIQQIYPDSQAMTKPLRQAAEALADMQRRASEASDSLTVAQTMGDALMTALDSAAGAASMLGASVPGAGWLDGAISGASRLASQLWDAAKARAAATATTDPTGLTAMDDERGSQRPQVHSGTGYTRDRLRAEARRGAAGGGGGARSVDRDSFDAVTKAAEEALAAMDLAIAAIHEKVALGLMSTAEGEEAISRAKDRAAASIAELIPKMQAANDVSGDQAAKAVEKWRLEVRGLADDYDDVNDKISESAKKAAQSSLYDWIRSAKGGKDAISDFGQHVLDTFARIASQRIADAVFNPIIDSLVGAVFGPTAVAANAKGGVYSGAGISAYSGTIVDRPTLFAFAKGTGLMGEAGPEAILPLDRDSTGKLGVRASGGAGAPVTVNVYNNAPGTKAETVERQEGGDRIIDVMIDQIRGVIAEDIATGRGPLPAVMAGTYGLGRVGR
complement(3110410..3110550)       hypothetical protein; RCAP_rcc02912                                                  N/A                 MRGHRAVDEIEHRNLVAAIHAAFADTQPRAAAPRPGAPIDGDIRFL
complement(3110574..3111011)       conserved hypothetical protein; RCAP_rcc02913                                        N/A                 MSNSEDLEALFPGQRHITIAGVAVALGPLKVRQFGAFSKAAEPFAGFVIAGDYLAAVVQHPAAVIAALEIATGQPAAVFEDMTSDQVMQVLAEVMEINLRFFAERLLPVRDQLRERMQAITKASIGQPPSPASSAGDTTLPPSES
complement(3111016..3111981)       PHAGE_Rhodob_RcapMu_NC_016165: hypothetical protein; RCAP_rcc02914; phage(gi356870885)     5e-34               MSDRLTRRAAVMAKVEAVYGTAETTFAATDAVLLVNPPSFAIEPDNVPRNLALPWLGNSEELPATRRARLKFDVELVGSGTPGTPPAWGKFLRGCGFAETIVAGNRVEYTPVNTGFEGLTFRFFRDGVRYVARGGRGTVKLNLAAYAVPTASFEFQAFDTLAVPAGVPAIDLSAFIAPEVVTDAASGDIRLGATLATGTISGGQVLASKGLTIDIGNKVSHRKILSGEQIRIGDRSVSGQMAVDLTAEDEITWRSDINAVALTSVAFQHGTAAGKRIALFGGRVQRTNPQAIDDDGSVLIQSDLRFLPGQTGAPEITIIAR
complement(3111981..3112184)       conserved hypothetical protein; RCAP_rcc02915                                        N/A                 MSKSKTTPAPSVQPYPDRGGSFVLDEGSMTLTPVPKPGETADDTPVQGPVETDVETGPEPTPEQEPQ
complement(3112181..3112618)       PHAGE_Rhodov_RS1_NC_020866: hypothetical protein; RCAP_rcc02916; phage(gi472342919)     1e-19               MAEVDDITARLKERVPGLGGRAWGAAEFGALTATGQLPQVTPAAHVIPTGIKGGPQASRTGAYVQSIERLYSVVLTVKAGDVSGARALPVIGELIAAIIAALAGWDWGGRVGVMVFRGCTLSRAVAGFVYDISFSITDQLRFTPT
complement(3112618..3113046)       PHAGE_Rhodob_RcapMu_NC_016165: conserved phage protein; RCAP_rcc02917; phage(gi356870882)     1e-16               MTYATQQQMIDRYGASALVMLTDRAEIATGAIDAAMITRALADADATIDGYLARHYALPLATVPPQLPPIAQVLAFWSLHLTEPDAKTKADYDTAQRMLRDIADGRVKLAVAGAEPQTTAASGVRMTDRPRPLSASTMTGFI
complement(3113166..3113405)       conserved hypothetical protein; RCAP_rcc02918                                        N/A                 MAKKPEPTPEPDTVTAQVIDALDHDRTVYGPGDTVDLPRPEALKLRGLGVVTFDAAATVPEAPAEEDGATDPAPPAEAT
complement(3113468..3114442)       PHAGE_Pseudo_B3_NC_006548: capsid protein; RCAP_rcc02919; phage(gi56692607)          9e-70               MATSRPFIVDATLTAVAIGFKNGSAMRIADKVLPRLPVSAEKFKYTVYPISEAFNTPDARVGRKGAVKQLEFSGTETTSDVADYGLDSPIPQSDINAANAAKAEGRTIYDPEAHAAEMLTETIENIRELRVANMVFNAASYAASRRITLSGTSQFSDYANSDPIGVIAAGMDATLVYRPNTVVMGRAVWSKLSSHPKIVNAVKGNVSNQGRISIEQFKELLAGDGITEVLVGDAWANTAKPGQNPALARTWGNHLALLHLNPLASVEQGGITFGFTAQFGDRLAGRIEDPDIGLEGGFRIRVGERVRELISAQDVGYFIQNVIA
complement(3114466..3114849)       PHAGE_Pseudo_B3_NC_006548: hypothetical protein B3ORF37; RCAP_rcc02920; phage(gi56692606)     4e-13               MIPTLIRAYEASAAIGPYKIAKFSDAAASTKIGPAAANTDPVLGVTGQFGGAAGDMVDVTQSGIGQVTLGGTVTAGAELTADANGNAIAAVPTAGVFMSVVGKAQAPGVAGDVIEILVGPRAFYRGA
complement(3114846..3115946)       PHAGE_Rhodov_RS1_NC_020866: I protein; RCAP_rcc02921; phage(gi472342914)             1e-59               MTHKPSTSLALCAAQPLPEGDAPEWVHLLPSAGGTIGTHDGRGPYRVTDPVAIIAASLQADARDAGGLIIDENHAADLAAPLGLPSPARGRIVAMEARPDGVWGQVEWSPAGVALLAERAYRGISPVIIYAADGTVRRIARASLVNYPNLRGLVALNSESDMDLTKLARALGLAETATLEEIIAAVEALTGAKGKAEEDVALQSELGTILGVDGNREALIAATRLAVSGKDTLIALQAQVTAQAAELKGIRDAATRATAEAFVDGEIARKRVGLNAANRDEFVSLHMSQPETARKLIEGMPIAGETHTAQLPSAIKTGGEFLSLNAERQGRVLHDKAKAFQTEQAGKGLSISMIDAIQHVKKEMRL
complement(3116052..3116507)       PHAGE_Rhodob_RcapMu_NC_016165: virion morphogenesis protein; RCAP_rcc02922; phage(gi356870876)     4e-16               MITIEFRDGEILAGIDRLQDQLGDMTTFMSDLGELLVASTKARFPAGTAPDGTAWAPNSPVTLARKTDSRPLFGTSGSLNSQIFSAAGADYVQIGSDRVYAAMMQFGGTKEQWPHLWGDIPARPYLGLSDEDKENILAETRDWLSGAFTGD
complement(3116504..3116740)       conserved hypothetical protein; RCAP_rcc02923                                        N/A                 MVVDPAHEAYVRSILTDLSAHPDEPAHFAWQQSYPAPDPMHVPKSMAWQLMAIGWTLEGELAKYPPPEADPLPDGALS
complement(3116844..3117140)       phage conserved hypothetical protein; RCAP_rcc02924                                  N/A                 MCPDLDLLFQDLHRQRTKGEPLVQIRRGEWARKDHYYNAYQGREYAFAKPNPALEMLTMALQPVLGADIKSIRMLRDLMKVDPEMLEMALGVLFYWKV
complement(3116969..3117376)       hypothetical protein; RCAP_rcc02925                                                  N/A                 MDGLFEATELVVSAGDEPRMSAALLADRLGIARRQTMMRLIERNDAALRRFGEYLATVAKYSGRGRGQPEKDYLTTCRRCVLTLICCSRICTGNAPKASRWSRSAGASGREKTIITTPIKAANMLSPNQTRRWKC
complement(3117360..3117695)       conserved domain protein; RCAP_rcc02926                                              N/A                 MGLEALIKAHLCGEFEAARAAGDIGALNQMMTDLTSFLGYAIACATMGVADKAGGLCRCVEDQLEAEVEVWAQEVRAMNGTDQSNIIRPSAFGQSAAMPVFSMEATDGRTV
complement(3117695..3117952)       conserved hypothetical protein; RCAP_rcc02927                                        N/A                 MADKVKSIQPGPIFYDVFLVYLRVIGTNLKDWCAPHGVTATNAKSAATGGWNGTKARALRQKMIDEVGEETFLRLYTERLRREAA
3118048..3118797                   PHAGE_Rhodob_RcapMu_NC_016165: c-repressor; RCAP_rcc02928; phage(gi356870844)        3e-18               MNAEYGLRLSSWRKEQKLSQRALGSVLGVSQGYISDIESGRSEPSRNFLQALTERFGVSADWILYGVGLPQTERSGGFEARKPGKRIEPPDLGRPLSGDFRFADEDFFLIERMDLDVSAGHGIVPIPGAETERIALPRSMFLRSRLTPDFTVLVRVKGDSMAPTIPDGALILLDCSVRRVDRAGIFAFSLDGQSYVKRLVPSGTMADGRPQMLMLVSDNPAFPPVALAGPEMDRLLIAGRVRASIGQFD
complement(3120394..3122220)       conserved domain protein; RCAP_rcc02929                                              N/A                 MTIISKPVFLDFLNREAGRAANCDRPEDDDIAIIRILVVSLAHGFSANISQVAEYCNSRPKLFSQVIKLMQRGVIDATSSNATLSEFIEDRRARYSHVPERYPFYFSDQGGLVDLQLGTRNPFSMTGDLSRLILAYDQSKFDFDLVRLSPSDRAVFESGLNVIQSKVFKREDLAITRDLLVSNIAGGEMSARQIEAATRAISALYMKNYADRRSLATCTGIPQFSYRDVVENFPAFDFPLLKRALQALGALRQVSLWSIDDIIEHYGSLPHRHFSYHLQIFLDALAISARNKVNDSSDMSSIRLHIDRVFIQYLDIDYVKKFGNPEEFYRFGIERLIQCAARISQLDPIFNSTWSSQVSHQNNDVIAVTTATDSEDDALIQKLKESGFTSSRPVRVGNGFATEYTRGTSQHVYHLRTSAGSLGVNSAGLILPAALKELGATHLISVGICFGLLPEKNGEPYQKCGDVLVSTEIQDYETARIGTEKTINRGEKLPAGTGLLQAARLVRPNFAEADFKIYFGQIISGQKLVDSKEFVENLRTEFPGAIGGEMEGNAVSASGQFNGKEWVMIKGICDWGMGKTDNWQDVAALNACDVAMKMIVTFFDAQSR
complement(3122350..3123186)       conserved domain protein; RCAP_rcc02930                                              N/A                 MSACEEISATMSAGSQYLNLAEKIIDARGIPLTGAEIISFAENYNALPYENYETIVKTLQARIAEEILSNRGHSRFIRTGVGKYFLRNLHRQSHPWIRERNFNYLGRRAKPEHPYRILIIPRSLASKVDAIVDWASASALFAEASYSYQSEIPEGSVPVVTAPMLKWNELFFSFSVGAHTHFNPIISKRTALLRKFLDEYDLDLFEVDGSGATSSTARAVLPVLLNGRRHRLEHGKLMPEEKIYFYQVADLLSNRFAFYSAETDAFVMVSLLDISKYS
complement(3123527..3123787)       membrane protein, putative; RCAP_rcc02931                                            N/A                 MLRKLITLYRIVFFAWCGLFLAVALIVGLGFFIAGDTPKARETGLMMALGGLFCSIVFAGNMALALENHELLKRIAKGQGGADRRG
complement(3123824..3124375)       PHAGE_Entero_Fels_2_NC_010463: DNA-invertase; RCAP_rcc02932; phage(gi169936026)      4e-30               MLIGYARTSTLDQIAGFVAQRKALQALGCEKLFEEQVSSVGQRDALSAALEFVREGDTLVVTKLDRLARSVRHLGEIVEALERKKVGLRVLDLGLDTANATGKLMLNVLGAVAQFEREMMLERQREGIAKAKADGKYKGRKPTAQFKQAEALALLAAGTPKREIARKLGISERSVYRVISAAA
complement(3125000..3126358)       conserved hypothetical protein; RCAP_rcc02933                                        N/A                 MNDMNTDTLRVTALGHSRDHLEAARMAEFVFVPKTDAARALVAHLTAITLDHEAKVKPRNRKRQAEAQRSFTGAVSAFAADLIHHARFQEAEGFFYRSYDKEALGQTFVSVRCFEQLLQFWAEMGLMEVTRFFRVRETWEGEDTGTGFGRARRFRATAELLSLAEGFGITPDTLKDHFQKETGRLSPVTVRSEVANRHGTGVTSANMRFAGPKYEAEVQRVKEINAILGQGGFDLAETPRVYRLFSRGNFHNFDFNMGGRLYCCSEDDWQQRPKEDRALITCRGEPTVELDVGSSHLFILYALHDLELDTDDDPYFLPGVEREVVKGLFAAMTGKGSRLTRFPKKLSEDYMKPTGRKISTVYKLGKVLDALIAKHPILNKLKKGSMDWARLQYEESECFMECLTRLGHDHGVAALPVFDSLIVAKQHRDVALTCLVEAYGNRFGCLPEVRCK
3126240..3126251                   attR                                                                                 N/A                 GCCCTTGCCGCA
complement(3126440..3127831)       phage integrase; RCAP_rcc02934                                                       N/A                 MIVMFAAGALRVMCMHLLLKGNTYYYRRRIPEDVRSLYKVPGKRAREQLMFSLKTADKAEACRLADAQTRRLDALWKAHREGSKAGADPHAALAMLEARHLKPGDALRHRGHPAIEAYIDNLVGPGREEEAIALLSPTEQLSLDYLYSPSVPKLLSDAREKHFDLGKGPKAKVAVDQFERAWGHLLEITGDIPLDHLSRDHANEFVQKLIKRGLSAETVRRYLAQVRPVIQTGLLEFEMSKVNPFEKLAIPNRDEGPRKPRDTFTIEELMAIQAACREKDDERRWLIAMLSDTMTRLAELQQIMKEDVRLHDPVPHVRLRVTDVRNLKTGSSARSVPLVGAALWAAQRAMTTEGKFLFPSIAKDVPKDEFHSGAASAALNKWLKENKLARTGQTLHSFRHTMRDRLRNVEAPPDLIDRIGGWAGKGVGETYGKGHSLELMQRYMLKTVLPLPGEGPAEQASAA
