gi|00000000|ref|CP001621.1|  Mycoplasma mycoides subsp. capri str. GM12 transgenic clone 1089202, gc%: 23.92%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

#### region 1 ####
complement(903166..904464)         PHAGE_Mycoba_LinStu_NC_023714: gp260; MMCAP1_0766; phage(gi593776966)                5.67e-22            MycoplasmamycoidessubspcapristrGM12MKNNYKSLVIVGSQWGDEGKGKITDYFSQKADVVVRFAGGDNAGHMIEFNNKRHKVTIIPSGVFNPKVKNIIGNGTVINLKSLVSEIKRLNESNISTDNVFISDRAHLIFDWHTLIDQLQEENRKENKIGTTKRGIGPTYADKAARYGIRICDFQNPNFKDILKENLDYHNQIITKVYNHEPLDFDVIYNELMTNYQFIKNNIIDSGYEVSNLINENKFVLFEGAQGVLLDIDHGTYPFVTSSNCSANNASIGTGIHNKQINKVLGIVKAYNTRVGSGAMVSEIKTELAHKLRERGREYGSNTGKPRRIGWLDLVALKYAIRVGGIDQLFLTLFDVLDTEAKIKICTHYKLDGKIIDWFPASDYELKKCEPLYEELDGWNQDITKVTSFEELPINAQKYIKRIEEIVKVPFLGFSVGPDRKQTILIKGEFDD
complement(904685..904837)         ribonucleoside-diphosphate reductase subunit alpha; MMCAP1_0767                      N/A                 MycoplasmamycoidessubspcapristrGM12MKNYRNNHKFKQGCSSIYYVRIRQDVLEDSENYECDALKFKTFIYLITYI
complement(904818..905333)         GANTC--recognizing Type II restriction modification system (MmyCIV) endonuclease subunit; MMCAP1_0768     N/A                 MycoplasmamycoidessubspcapristrGM12MVKDAKELNSILQKEFDDSWDVIIVPKKVIKNSSIKNSMEPDFLIIQKSSETLNIIELKDGWVFDTKKVAGEYQQLINFQNEISKSISFITKIWICSFNNDSKEEIFLGLKSKVPIKHIMTGEEFCDLLNISKQEIQKERQRDSEKNLNFFVTELLKIDDVRNRIIEELSK
complement(905495..906214)         PHAGE_Bacter_Sitara_NC_028854: DNA methyltransferase; MMCAP1_0769; phage(gi971749745)     2.92e-18            MycoplasmamycoidessubspcapristrGM12MKLSPSVFSNKRTKISELGKDIFKNERMEFNHKYGLDGLVILNNIKDNAIPVVFFDPQYRGVLDKLSYGNEGKRQIKRSELQQMTEEKIVHFIREMDRVLIPTGHLFLWVDKFHLCQGISDWIKDTSLSIVDMIVWDKEKMGMGYRTRRQCEYLIVLQKKPIRAKNVWRLRNIRDVWKEKIVGKVHPHQKPIELQKILIQAVSNPGDVIMDVAAGSFSVLTSCIETGRLFIGTDIKEKQ
complement(906275..907120)         PHAGE_Pseudo_OBP_NC_016571: hypothetical protein; MMCAP1_0770; phage(gi371671514)     8.12e-40            MycoplasmamycoidessubspcapristrGM12MYKKNKKPKYNKEKTICKEIGYFLNKNNEYQIHPFPSTVNKVPKKLPEFITNLTLAFWNNENEIICNLDKWNLKNVTSLNRMFKDAKSFDQDISNWNTSNVVDMQLLFDGAENFNQNLNKWDTSNVLNMEAMFRSAYLFNIDLNKWNTSKVQNMRSMFYEARSFNGDISTWDVSSVKHMEYMFYGVLKFNQDISSWNTKNVINTRSMFKNAIGFNQNISYWNTSNIKEMSWMFHNARNFNQDISSWNVSKVNLFNSFSNNSKIDKNKKYLPKKFISKISKT
complement(907226..909388)         PHAGE_Lactoc_phiL47_NC_023574: ribonucleotide-diphosphate reductase subunit alpha; MMCAP1_0771; phage(gi589890883)     0.0                 MycoplasmamycoidessubspcapristrGM12MKENKNTIVLDDVDDEYIKLNARSKIFSKDQDNFQLDVKAAELYLKNYIEPRMKKFSSLKERLDYLLENKYYDSEILNKYSFDQISQLNDYAYSFNHHFPSFMGALKFFNAYGLKTFDTTMYLETYTDRVLMNALFLGNGNFTKAKNLLKDMMLGRFQPATPTFLNAAKKHRGEYVSCYLLRTEDNMESICRTISTSLQLSKRGGGVAICLTNLRETGSPIKNISGLSSGPIPVMKILEDSFTYADQLGQRQGAGAVYISAHHPDIISVLDTKRENADEKIRIKSLSLGLVIPDITFELARDNKDMALFSPYDVQKVYNKPLSDISITEKYYEMLENPNIKKTYISARKFFLTVAELHFESGYPYILFEDTVNRRNAHDKKGRIIMSNLCSEIVQVSTASEYSSDLSFVKTGEDICCNLGSLNIDKMMKSGKEFSDSIYNAISALDIVSRNSDLSAAPSIQKGNAQNHAVGLGAMNLHGFLATNKIMYDSPEAVDFTNMFFYTVAYNAFKASNKLAQEFEKFASFDESRFADGSWFDKYTKCEFDKWTPQTNRVKELFKDYDVQIPSQTDWIQLVEEIKKTGLANSHLMAVAPTGSISYLSSCTPSLQPVVSTVEVRKEGKLGRVYVPAYQINFDNMGYYAMGAYELGADPIINIVAAAQQHVDQAISLTLFMTDKATTRDLNRAYVNAFKQGCSSIYYVRIRQDVLENSENYECDACKI
complement(909375..909848)         PHAGE_Bacill_SPG24_NC_030903: hypothetical protein; MMCAP1_0772; phage(gi100023)     3.44e-14            MycoplasmamycoidessubspcapristrGM12MHSNVKKVTDKDVIKPVGIPFVVYFSSISNNTHRFIQKLEIENIRIPYELDQSISVNRDYVLVTPTYSGGGEYVEGAVPKQVIKFLNNKENRSFCRGVISSGNTNFGDTFGIAGPIISKKLNVPFLYQFELLGTQYDVSQIKQILLKFWEDGNNERK
complement(909857..910876)         PHAGE_Mycoba_Bongo_NC_041970: baseplate wedge subunit; MMCAP1_0773; phage(gi100108)     7.77e-122           MycoplasmamycoidessubspcapristrGM12MAKEQKYYHESVSPIEFVKNNFKGNLRSVNWNVINDEKDLEVWNRITQNFWLPEKIPVSNDLSSWRSLSSEWQQLVTRTFTGLTLLDTVQATVGDVAQIEHSLTDHEQVIYSNFAFMVGVHARSYGTIFSTLCSSEQIEEAHEWVVKTETLQKRAKALIPYYTGTDPLKSKVAAALMPGFLLYGGFYLPFYLSARGKLPNTSDIIRLILRDKVIHNYYSGYKYQKKVAKLPVEKQAEMKEFVFKLLYELIDLETAYLKELYAGFDIVDDAIRFSVYNAGKFLQNLGYDSPFSEEETRIEPEIFNQLSARADENHDFFSGNGSSYVMGVSVETEDEDWEF
911175..911459                     preprotein translocase, SecG subunit; MMCAP1_0774                                    N/A                 MycoplasmamycoidessubspcapristrGM12MINLLASTTKLAQQLILGFEIFIFIIAFIMIAIGLLQNKQSQTGLSALNGGNEELFSNSKERGLDKTLSIWMLVLGIIFFIIALTISIITNTML
911495..913609                     PHAGE_Lactoc_Q54_NC_008364: putative ribonuclease; MMCAP1_0775; phage(gi115304286)     7.69e-73            MycoplasmamycoidessubspcapristrGM12MESKIIEILKKNHHKISLNKLLTYFKALDYSLVKNYLDQLEKNNNIAISLENNIYLLDEIYKKGTIKLNPKGFGFINDVNDLTTEDHFIAGVDLNNSIHQDEVVYILKQEEDNRLKAIVIDLIKRNKVYLIGEINRSFDKRFLDFIPNDKSFDSFRFVIVNKNEFKYEEFNIIKAKIISCKERKIFIRLIKIIGNSKKASDRILAIAEEFDIKTSFDKQTLDNAKQINLSTDKLEKEFLKRQNNSLVNKTIVTIDGIDSKDLDDAICVEKLENNNYKLFVAIADVSYFVRYKTSLDKEALLRGNSTYLANKVIPMLPNILSDDLCSLNPNTKKLVFVCEMEFDNNANMLNKKVYESVIISKARLNYDEVNNYFKTKTWTHDDKTKKMLDIAYELYKKLEDLKAKKGTISFDVREPKIILDKNLNVIDIKTKTADQAEKLIEQFMVSCNEAVAELIYQKDLPFLYRNHNKPDEDELINWYKSLKTFGINPKLTNKQVLDPIFINHTLSQIKEQIKDETEVELLNISLLRYMDKAKYGLENIGHFGLASDCYTHFTSPIRRYSDLLVHRYLKQYLITKDLEKTSLENNTNYVNKVSNIINDTETKSVECEREVIKACMCEYMLNKVNNTYTATISAVLKFGIFIQLDNLVEGLVHISNMNSDLVYDETNRILIKPDNTYYRMGQKVKVKLINVDIKKRTIDFVLIE
913619..914065                     PHAGE_Staphy_StauST398_5_NC_023500: SsrA-binding protein; MMCAP1_0776; phage(gi588498309)     8.89e-30            MycoplasmamycoidessubspcapristrGM12MSEHLIVKNKKAYFNYEIIQTYQAGIVLNGPEIKSIRNHDVSINEAFVLIRKKEIYILNMNVKKYQFANYIKGLEETRTRKLLLHKKEIIKILNKIKQENLTIIPVKLYFKNDYVKLEIALAKGKKLHDKRQTIKKRDTERKELKDYK
