gi|00000000|ref|CP001668.1|  Mycoplasma mycoides subsp. capri str. GM12 transgenic clone 1084586, gc%: 23.92%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(909435..910733)         PHAGE_Mycoba_LinStu_NC_023714: gp260; MMCAP2_0766; phage(gi593776966)                5.67e-22            MycoplasmamycoidessubspcapristrGM12MKNNYKSLVIVGSQWGDEGKGKITDYFSQKADVVVRFAGGDNAGHMIEFNNKRHKVTIIPSGVFNPKVKNIIGNGTVINLKSLVSEIKRLNESNISTDNVFISDRAHLIFDWHTLIDQLQEENRKENKIGTTKRGIGPTYADKAARYGIRICDFQNPNFKDILKENLDYHNQIITKVYNHEPLDFDVIYNELMTNYQFIKNNIIDSGYEVSNLINENKFVLFEGAQGVLLDIDHGTYPFVTSSNCSANNASIGTGIHNKQINKVLGIVKAYNTRVGSGAMVSEIKTELAHKLRERGREYGSNTGKPRRIGWLDLVALKYAIRVGGIDQLFLTLFDVLDTEAKIKICTHYKLDGKIIDWFPASDYELKKCEPLYEELDGWNQDITKVTSFEELPINAQKYIKRIEEIVKVPFLGFSVGPDRKQTILIKGEFDD
complement(910954..911106)         ribonucleoside-diphosphate reductase subunit alpha; MMCAP2_0767                      N/A                 MycoplasmamycoidessubspcapristrGM12MKNYRNNHKFKQGCSSIYYVRIRQDVLEDSENYECDALKFKTFIYLITYI
complement(911087..911602)         GANTC--recognizing Type II restriction modification system (MmyCIV) endonuclease subunit; MMCAP2_0768     N/A                 MycoplasmamycoidessubspcapristrGM12MVKDAKELNSILQKEFDDSWDVIIVPKKVIKNSSIKNSMEPDFLIIQKSSETLNIIELKDGWVFDTKKVAGEYQQLINFQNEISKSISFITKIWICSFNNDSKEEIFLGLKSKVPIKHIMTGEEFCDLLNISKQEIQKERQRDSEKNLNFFVTELLKIDDVRNRIIEELSK
complement(911764..912483)         PHAGE_Bacter_Sitara_NC_028854: DNA methyltransferase; MMCAP2_0769; phage(gi971749745)     2.92e-18            MycoplasmamycoidessubspcapristrGM12MKLSPSVFSNKRTKISELGKDIFKNERMEFNHKYGLDGLVILNNIKDNAIPVVFFDPQYRGVLDKLSYGNEGKRQIKRSELQQMTEEKIVHFIREMDRVLIPTGHLFLWVDKFHLCQGISDWIKDTSLSIVDMIVWDKEKMGMGYRTRRQCEYLIVLQKKPIRAKNVWRLRNIRDVWKEKIVGKVHPHQKPIELQKILIQAVSNPGDVIMDVAAGSFSVLTSCIETGRLFIGTDIKEKQ
complement(912544..913389)         PHAGE_Pseudo_OBP_NC_016571: hypothetical protein; MMCAP2_0770; phage(gi371671514)     8.12e-40            MycoplasmamycoidessubspcapristrGM12MYKKNKKPKYNKEKTICKEIGYFLNKNNEYQIHPFPSTVNKVPKKLPEFITNLTLAFWNNENEIICNLDKWNLKNVTSLNRMFKDAKSFDQDISNWNTSNVVDMQLLFDGAENFNQNLNKWDTSNVLNMEAMFRSAYLFNIDLNKWNTSKVQNMRSMFYEARSFNGDISTWDVSSVKHMEYMFYGVLKFNQDISSWNTKNVINTRSMFKNAIGFNQNISYWNTSNIKEMSWMFHNARNFNQDISSWNVSKVNLFNSFSNNSKIDKNKKYLPKKFISKISKT
complement(913495..915657)         PHAGE_Lactoc_phiL47_NC_023574: ribonucleotide-diphosphate reductase subunit alpha; MMCAP2_0771; phage(gi589890883)     0.0                 MycoplasmamycoidessubspcapristrGM12MKENKNTIVLDDVDDEYIKLNARSKIFSKDQDNFQLDVKAAELYLKNYIEPRMKKFSSLKERLDYLLENKYYDSEILNKYSFDQISQLNDYAYSFNHHFPSFMGALKFFNAYGLKTFDTTMYLETYTDRVLMNALFLGNGNFTKAKNLLKDMMLGRFQPATPTFLNAAKKHRGEYVSCYLLRTEDNMESICRTISTSLQLSKRGGGVAICLTNLRETGSPIKNISGLSSGPIPVMKILEDSFTYADQLGQRQGAGAVYISAHHPDIISVLDTKRENADEKIRIKSLSLGLVIPDITFELARDNKDMALFSPYDVQKVYNKPLSDISITEKYYEMLENPNIKKTYISARKFFLTVAELHFESGYPYILFEDTVNRRNAHDKKGRIIMSNLCSEIVQVSTASEYSSDLSFVKTGEDICCNLGSLNIDKMMKSGKEFSDSIYNAISALDIVSRNSDLSAAPSIQKGNAQNHAVGLGAMNLHGFLATNKIMYDSPEAVDFTNMFFYTVAYNAFKASNKLAQEFEKFASFDESRFADGSWFDKYTKCEFDKWTPQTNRVKELFKDYDVQIPSQTDWIQLVEEIKKTGLANSHLMAVAPTGSISYLSSCTPSLQPVVSTVEVRKEGKLGRVYVPAYQINFDNMGYYAMGAYELGADPIINIVAAAQQHVDQAISLTLFMTDKATTRDLNRAYVNAFKQGCSSIYYVRIRQDVLENSENYECDACKI
complement(915644..916117)         PHAGE_Bacill_SPG24_NC_030903: hypothetical protein; MMCAP2_0772; phage(gi100023)     3.44e-14            MycoplasmamycoidessubspcapristrGM12MHSNVKKVTDKDVIKPVGIPFVVYFSSISNNTHRFIQKLEIENIRIPYELDQSISVNRDYVLVTPTYSGGGEYVEGAVPKQVIKFLNNKENRSFCRGVISSGNTNFGDTFGIAGPIISKKLNVPFLYQFELLGTQYDVSQIKQILLKFWEDGNNERK
complement(916126..917145)         PHAGE_Mycoba_Bongo_NC_041970: baseplate wedge subunit; MMCAP2_0773; phage(gi100108)     7.77e-122           MycoplasmamycoidessubspcapristrGM12MAKEQKYYHESVSPIEFVKNNFKGNLRSVNWNVINDEKDLEVWNRITQNFWLPEKIPVSNDLSSWRSLSSEWQQLVTRTFTGLTLLDTVQATVGDVAQIEHSLTDHEQVIYSNFAFMVGVHARSYGTIFSTLCSSEQIEEAHEWVVKTETLQKRAKALIPYYTGTDPLKSKVAAALMPGFLLYGGFYLPFYLSARGKLPNTSDIIRLILRDKVIHNYYSGYKYQKKVAKLPVEKQAEMKEFVFKLLYELIDLETAYLKELYAGFDIVDDAIRFSVYNAGKFLQNLGYDSPFSEEETRIEPEIFNQLSARADENHDFFSGNGSSYVMGVSVETEDEDWEF
917444..917728                     preprotein translocase, SecG subunit; MMCAP2_0774                                    N/A                 MycoplasmamycoidessubspcapristrGM12MINLLASTTKLAQQLILGFEIFIFIIAFIMIAIGLLQNKQSQTGLSALNGGNEELFSNSKERGLDKTLSIWMLVLGIIFFIIALTISIITNTML
917764..919878                     PHAGE_Lactoc_Q54_NC_008364: putative ribonuclease; MMCAP2_0775; phage(gi115304286)     7.69e-73            MycoplasmamycoidessubspcapristrGM12MESKIIEILKKNHHKISLNKLLTYFKALDYSLVKNYLDQLEKNNNIAISLENNIYLLDEIYKKGTIKLNPKGFGFINDVNDLTTEDHFIAGVDLNNSIHQDEVVYILKQEEDNRLKAIVIDLIKRNKVYLIGEINRSFDKRFLDFIPNDKSFDSFRFVIVNKNEFKYEEFNIIKAKIISCKERKIFIRLIKIIGNSKKASDRILAIAEEFDIKTSFDKQTLDNAKQINLSTDKLEKEFLKRQNNSLVNKTIVTIDGIDSKDLDDAICVEKLENNNYKLFVAIADVSYFVRYKTSLDKEALLRGNSTYLANKVIPMLPNILSDDLCSLNPNTKKLVFVCEMEFDNNANMLNKKVYESVIISKARLNYDEVNNYFKTKTWTHDDKTKKMLDIAYELYKKLEDLKAKKGTISFDVREPKIILDKNLNVIDIKTKTADQAEKLIEQFMVSCNEAVAELIYQKDLPFLYRNHNKPDEDELINWYKSLKTFGINPKLTNKQVLDPIFINHTLSQIKEQIKDETEVELLNISLLRYMDKAKYGLENIGHFGLASDCYTHFTSPIRRYSDLLVHRYLKQYLITKDLEKTSLENNTNYVNKVSNIINDTETKSVECEREVIKACMCEYMLNKVNNTYTATISAVLKFGIFIQLDNLVEGLVHISNMNSDLVYDETNRILIKPDNTYYRMGQKVKVKLINVDIKKRTIDFVLIE
919888..920334                     PHAGE_Staphy_StauST398_5_NC_023500: SsrA-binding protein; MMCAP2_0776; phage(gi588498309)     8.89e-30            MycoplasmamycoidessubspcapristrGM12MSEHLIVKNKKAYFNYEIIQTYQAGIVLNGPEIKSIRNHDVSINEAFVLIRKKEIYILNMNVKKYQFANYIKGLEETRTRKLLLHKKEIIKILNKIKQENLTIIPVKLYFKNDYVKLEIALAKGKKLHDKRQTIKKRDTERKELKDYK
