gi|00000000|ref|CP001719.1|  Methanobrevibacter ruminantium M1, complete genome. 2937203, gc%: 32.64%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
417460..418080                     PHAGE_Lister_B054_NC_009813: gp77; mru_0280; phage(gi157325361)                      9.21e-22            MethanobrevibacterruminantiumM1MTMIEISTIKITDIKPAEYNPRIMSQLEHTKLRNSMETFGVVDPIIINLKNNHIIGGHQRYEVLLDKSMEDNEFIKELHLIRLGDVGWAFPESDLEVEDDDHEKALNLALNNIEGEWDLPKLEPILTDLKDVGFDIELTGFSDIELTELNLENNLVFAEEFEPDESEEDVDLEDIYDEPVKEMLQCPACDHVDVVKRFKRVDSQGD
418083..418283                     hypothetical protein; mru_0281                                                       N/A                 MethanobrevibacterruminantiumM1MKIYLAAADTMSEDIIRLLPVAKRLHWNLFSYYYLLTLKKMEDYDIIRKASKKRPYRQRSAQLPEG
418369..418827                     PHAGE_Bacill_BCD7_NC_019515: hypothetical protein; mru_0282; phage(gi422935976)      4.23e-16            MethanobrevibacterruminantiumM1MDVDNLLGYDKVLELRSLLEEVTDKVIPVWHKNRGIKDFKQMCQDYNFVSISGWRNEDVKDDQFIHFVRHAHRNGCRIHGLGLTRRKVLDRVPFDSVDSSSWLQTILYARLGQKQLDSKFATERRGDLAVLSYIKWMKTQEEYYKKWRHYHD
418820..419476                     PHAGE_Halovi_HCTV_1_NC_021330: hypothetical protein; mru_0283; phage(gi509140748)     1.52e-14            MethanobrevibacterruminantiumM1MINERIRPYLNFSFNDKKVIFVTLFVVSNLISNLLAIKVFNLGFWGLTTDCGNLLFPLGYLMADVITEVYGERTARRVILLGLFANILLIVATTLTVYMPYPSYWTGQGAYAYMFGFTPRIVLAGFIAYLVGQFVNARLMVLIKKWTNSKYLFMRTIGSTLGGELCDSCICSSIAYYGIVPNSGILLFILMQYVVKVTWEVVMQPLTYKSIAWARKDG
419480..420070                     phage-related protein; mru_0284                                                      N/A                 MethanobrevibacterruminantiumM1MAMPEPWERQRDENGKLEPIKAFEYFTEYLTMDKPRSMRVLCERLGKKDGYIRQLHAYSSTWNWVERAEAYDEHIILKKRLRKEKFYDELVESELPNLRKRLEYYNKNMNDIETDMTTKPTSKAHAYDKNSKAHSTTLNEILLMIGKPTEIKETSLEADIESDNKIDLENRVEVDITSDEFMESELEYMRKMIEEK
420081..421556                     PHAGE_Lactoc_98201_NC_031064: hypothetical protein; mru_0285; phage(gi100031)        2.87e-36            MethanobrevibacterruminantiumM1MTAASRVNAHGTMGLGRWSIYINNGFWKPRDFDVLIIELLQYAIQGRVSGILLGVPSRHGKSTLISKNFCSYFLSYFPNEQVILSSYSQGLASEFGGQVKDIVNHYGYLSPYKPTIRSDSKAKNKFKLNEPYRGQMLSAGAGGSIMGYGAGLLIVDDPIKNVAEAESKVRQAKLKDWWGGTIKSRVQRRSNGLPPIKIVIAQRLHLKDLHGIIKETEPTIPANDAFRILRNGGSIDPNTWVDFNLPAICDSEDDILGRKIGEVLWEEQRDYEWLMAEKRSMGSYLFNSIYQGQPVERDGEIFKREWFQDEVNHKLTCLIDPKDIPKDLPQLRYWDFGASGDAGDGTSAILTSYDGEYLYVLDLVAGKFSSLKVLKTFKRLCKKDGKQTRVMVEQEPGSGSKLLIKKFRREEDLRGYNIRADKVQVSKKVRAFDLEGLAEDRRIKMVPAHWNNKLIDQLVAFTGEDGGEDDIVDTITGSCRFWTRPRRRVKA
complement(421559..422884)         hypothetical protein; mru_0286                                                       N/A                 MethanobrevibacterruminantiumM1MSKKQEMMRIERLKHYAYQTGLIIPIFKNHDLIKKIENGKITNTDEIKIYIEENEKQIKRRREFISIIYDNCKYFKYDSICYKLISKVNNFEIKSLEELMNEIESEKKKNGFRKNIEEKELIKENENKGRLKEYVRIVRREYGLDFTSVKKLKLKIDNNKIRSKEELNEEIIEEKKKTELRRIVYDSDLNWDLKWELESKIRHNEITTKEELIKEIRRIEFINIIYDNNRDFKLDYVTIQKLVSKIGSNEITTKEELIKEMTEEKKKGIERRTEYKKIVNEAHALDNTSQWKLELKINNDEIRNKEELMNEIESEKKKTELRRIVNDSDLNDTSQRKLLSKIDEDIEVITKEKLKKEIQKEERIIEYKKIVNEAHALDNTSQWKLELKINNDEIRNKEELMNEIESEKKKTELRRKSEEIIRRKKERSDSYHPNANKPWKF
422996..424654                     PHAGE_Methan_psiM2_NC_001902: portal protein; mru_0287; phage(gi9630535)             2.41e-38            MethanobrevibacterruminantiumM1MSKNAKADAFVVTTEDGSYDIVDADVLERYAIKSESDETGSKQLKTDGWEYDDTLLEPLYDPLQLCELLEINTYHENCVDVVARDSAGIGYDIVPVTGEKEKELNKPKLTNFLENIEPNINELLYQMNYDRRATGYGALELIRKDKSKSEPVNLSHISSYTLRRTSDGKRVKQRVGTKTVWFVIYGKNYDKEGNLCDVHSETGEFHPYNSLSKEERANELLWTMEYTTKSKYYGLPKIVGAIPAIYSDISRSKYNTSFFKNYGMPSFAVLVSGDFVDYGQEEFLEDGTKNPEYDVTKTLKWKISQQLKQAIKNPHSAVTILVPSEGEEGNVEIELKPLSVETKEASFRLFRQDNRDEVIHAHRVPPYKVGINETGSLGGSNIEGATINYKNDVVLPIRFNDEFLINQVIKNDFKIKDWRFKITEHDTRDYTTDIAIIKELFLMASITPRQIIENIGERFGLTASDNPFLDEYYLNNVPLENVWNGGDVPMEAETVLDSLENDLMKDAGVMDEQLREKRQTRDDGAQGASFKEADSEYQERIQKAFDTRRAVQ

#### region 2 ####
435879..436922                     PHAGE_Methan_psiM2_NC_001902: structural protein; mru_0307; phage(gi9630537)         9.70e-19            MethanobrevibacterruminantiumM1MINILEVVTKSRDSLLITAPVLIPGERDCEFDYGEEPLTEGQIRQIAHEYLANYSLVDKNHEFFETREVIGVPVESYITNEPISLKGLDGTVNEYPKGTWIATTRITDEEEMEKALNGEYTGYSITTVSKKFADKQIQLPRRVLMKDIKDPVGFTISLVRKPCVRGAKFCSMKEDIENGDVVSENIDDKLEEETKGFVQSIKGIFNKEDKDEDKNPEDEDIELDIKAIVDEVTKDFVNTDDFETFKNELEKALSDKFETLGAELFKSLKKSLEKDKAEEAKNQEDDESDEDDDEEEAKDNGEAQNVQSSKSIPNHDIKDNQKVAKTGAARVYEIMGRDNTGSAVRKL
436963..438000                     PHAGE_Methan_psiM2_NC_001902: structural protein; mru_0308; phage(gi9630538)         2.37e-41            MethanobrevibacterruminantiumM1MGNEATLNQLVNEQEKAVFKSMRTDMETGKAVLNVEQLGYFLREATLDNTILRDADFKLMKSFKKHLNRVGINGRVLTNGYDVNGETDPEIPAADVDFGANELDVKKLKAMCEIEDDEKEDNMTQAQFEQTLLQMMGERIGEDLEYWALFADSEVARSDDPLLNTNDGWLKKCANHISSRSIAPSNGMFDIEDGPEAMFDAMIKALPPRFRKNRRMLKFYVPFEVEDAYRNILINRGTGLGDSAQIGFNALSYKGIPIEHCSTLDDEDGRGMLGNRVCSMLTNPKNLAYGIWKNLSVEPERIAKNELTRYWFRIRGDVDYYFRNGAVVSVMNSSDAEALPELSRA
438005..438409                     hypothetical protein; mru_0309                                                       N/A                 MethanobrevibacterruminantiumM1MISHIIVLLICFIGLVEAILMALVDWEDLAISVRKSPRKLYNVLKDELGLPEWNELSVIERRSMKKRYAVIRDSFPELPPWEELSVIDRRSHKRLYKLIKSVYDGDYDDSPSLEGPPAAVGPQKEIPLEEAEYP
438426..438839                     phage-related protein; mru_0310                                                      N/A                 MethanobrevibacterruminantiumM1MTWIGTEDVIEFTGVKPQTFRFEKGDTSSLETLLEKWILQAEGLIISYCNYDFNDLEEIPPAVVNVCLRLTANMVALAQARKDTPVIQVKEWNVQTVSSNIFSNDLKRDLTPFVHERKSYKGDEIDFFVITGDDDSW
438836..439279                     PHAGE_Staphy_B236_NC_028915: putative tail-component; mru_0311; phage(gi971755335)     1.19e-06            MethanobrevibacterruminantiumM1MKLQIDVEELKPLEPRFKKVAKRTVVLTANELQRNLKKLSPVDHGRLQGSWVIFQTGELERTVKSSAKYAIFVNDGTGLYGPLGHKIRPKNGKFLAFTPNKGKFKGKLVVVPWTRGQKPQRFVERSMEMTERRVQEFMIRAMMEMDS
439276..439785                     hypothetical protein; mru_0312                                                       N/A                 MethanobrevibacterruminantiumM1MRFVNTASLVPQTVKAYLEREICEGGLLEDVETLIPSVNSDVPVDPPAIWIVQHPTTRWSGSQPNLSNKIAMSVPFEFVCVEYSDDLEEAEILGISLASRVGSSLMKNFNKVKVDDSMPNRFFHKLEFETLYPVGEVTVVGKSERIPATSIIFNFVYVVDWLKCNRRYD
439797..441077                     phage-related protein; mru_0313                                                      N/A                 MethanobrevibacterruminantiumM1MGIRVVGMKEEARYGVAESAPDFHQEVSKAKASLNSTPNTKSSGSRMKKKARAGVYKPTANIEGEVDLKRIGHYLKAFLDNYHFTDGGSNPNVHEFWGGENNKLSSFTLWVTFDIFEKTIVGSLLDNFKMEVSDEYMKFTADFVYKTEESDEIENIELYKVKLLDGDWALMFYDVSVEIDENAPPGIVSSFSFDGKNNINVDKTIGLGSRGPQRKAAAQGRDISISFVSTLERETLELIQKAEYGEVGTEPSECKLCKIPLKLICNVCEDTTDRLEITFPECIFAVDYELSEADEIEVTFNLDAMGTGYATKLDGTRVLTDMYCRLVNDQPEIKSGEGVTSATVRLTVKDDNNQPVASNAVTIVNRVTDESYEATTGSAGGCSFNDVEPGRYDVIVEGYDVVAGSIISVNDDEESFDITVEEIEED
441083..441523                     hypothetical protein; mru_0314                                                       N/A                 MethanobrevibacterruminantiumM1MVVVKKSDILKGVKKIEKVKIEALDGDEMYLRPLSQAEINEVDEIEAKAMGIFETNETAHRGRRQKPKSVVESKGKINLELQQKAQHQAKTKAIFLSLDNEKNVGEEAWSETEIEQMPHKLFEELFNHVKRLSGIELDEDDVDTFH
441704..445003                     PHAGE_Lactob_c5_NC_019449: putative tape measure protein; mru_0315; phage(gi418488166)     5.90e-33            MethanobrevibacterruminantiumM1MPSSNVMNIIVKAEDMASSVAQKVENSFRKLGNTIDSTFTTSLSNTKFNQELTSFGTDLDKVTQRLKQVGVNGQSSFNQLTNAERRTLEKLSEFDPVSAQVLQHLSRIGITGQQTFNQLSVSEQKSLMNMKSTAQQLEEVNSKLRVVGIGAAQAANMLNQMKLDPSVGSNLDRAKLKVSEMGYSLDSTKGKILVLGTAIQTSLGNKWDSIKTKVQTTATNIRTALGNALTSVKSKVQNLGNAFSGLGGIISSAIGAIGMASISQLTVGLAMNRERMTALTNATMGGAKAGDQLLNGFTGVNKVFKDLNGNSTNYFMGLDEMTNHSLVSLDDLGQAMSTIKMSTGMSNEELMMFSSTVNDVGQRAILMGKSGEEAISLMQAAGRGLNGEFDMLKTNFGITKDTLTDLGWSGAADDVKGYQEALDKALEKGGDMDGMLDTTTGHLETLKKNFRVAGRHVGEMFTPYIDMAVQKLNGLKETCPGLFENLVMIAGAVSGFATVAPSIAPMISVFGDVGSAIKRTAGFLGLMEVAEDAVTLKSTFLTIAQIAGADAAVLQTAANSGLTASFWAMAAAILANPLTWVAVALIAIAVAVYEVGKSFGWWSDIGSMIGAVWAGIQRLWSAFINNPNVQGFLKDLSNAWNDICEALAPVIDWARKAWAELFPPSATGSFDIVRAIIDVFGQLGDFLGKVVNAVKSAWNALGGFAGFLPMLLGPVGMVVMALRMIVCILLGCSPGIVPALQKTQSVFMSVFGAIAEFIGGAVSNVVAILTRIISALTGIFTRVSSIVSTYLAKMISSVISWASSIVSKAKSASSKFLTNVVNYFSKLPSKVWNHLKNIIQKVTSWATSIVSKGKNAASKFLTAVVNHFSKLPGKVGTYVSNTASRISSGANKWVSNARSKASSTVSAVTGPISKLPGKVYNEFMGIGSRMLSAGSALVSKARQIGSNIVSGLLNAMNIHSPGTIQQKVVAEFENTLSRVGSMDSTALDVGQSVGNSIVRGFTDFGLDTGSFNADYSTDYNLNRKNDDNLDVNIKQELEFVFDFKNLPNDVDEDKLLEMLKEMVTDKSVIQALVSNPDFQSMDTKVKNSIIAKVKRARGV

#### region 3 ####
complement(1904044..1905168)       PHAGE_Ralsto_RP12_NC_041911: hypothetical protein; mru_1453; phage(gi100076)         4.63e-06            MethanobrevibacterruminantiumM1MIIPTLGCPSNCSYCWGSEDNAELMDIDVIKQIVEWLADFRDEPVHFTFHGGEPLLAGYDFYKEALPLLNDAETHETEGFSLQSNLWLLDEEMVELFSKYNIAISTSIDGPKEINDYQRGEGYYDKTMKSVKLATDHNIQINFVCTFTSYSKDFSDEIYDFFKANGLNLKIHAALPSLRGNNADPWALPQDEHGKLLIDWLDKYLYDLDKFVIMDLDHIAKSSLRRVGTLCTFNDCMGTTLAVGHDGSIYPCYRFVGMDEYIMGNVYDKPSMETLEQSEAWEKLMEFKNFVDEDCADCKFIKFCRGGCPYNGIVATQSPRAVDPQCEAYKMIFGEVSRRANEDFKKNAMAAFGGAPRVRKEGDPFSIMDLMTKM
complement(1905407..1905625)       hypothetical protein; mru_1454                                                       N/A                 MethanobrevibacterruminantiumM1MKFEDLMAKCPKCGSQDKTAVRRFIDNHHAHAELKEFKCDNCGFVYETGKDYEDNEDETIKKGLIKELNKTM
complement(1905820..1906866)       PHAGE_Serrat_BF_NC_041917: hypothetical protein; mru_1455; phage(gi100349)           4.77e-35            MethanobrevibacterruminantiumM1MDYSIKSGIFGLVVADALGVPYEFKDKHYCDMNPMTDMIGHGTYNQEAGTWSDDSSIALATLDGLTDYEFGEDDVEGMRIKNFAEIIDYDSIAHKFADWLINKKYTPHGDVFDVGNTTSHAIYSFYAGKVDALHASGAGKKDAGNGSLMRILPVSFLIYFLSLKYDFDEEGEMEAIHNLSSITHRTLRCQMACGIYIKIAIELLKNYFDSEDDSNLLELVNNGINSAKEYYETKEEFAHELSIYEDVFSLEIQDFDRDDIKGSGYVVEALKAALWCLLNNDDYKDTALAAVNLGHDTDTTAAIAGGLAGIYYGYDNIPSNWLDKIAKSDYIGELCNNLSDYLFEILED
1907206..1907985                   polysaccharide/polyol phosphate ABC transporter permease protein; mru_1456           N/A                 MethanobrevibacterruminantiumM1MSLEILKKGTSENFLLKQIIRKNFTSKYKDSVLGILWSFFNPLITMALLTAIFSSVFARNIENFPVYFLTGRCVIDFFNSGTKIAMTSLKKNSGILNKIFVPRYVFALGGIFSEFINFLMSMIVLIVIMIVTRAPFHLYAIFSVIPIAILFILILGVGLTLSILCTKFTDIEYLYKIFTSLLVYACAIFYPIDIVPQPIRQYMELNPIYGIIAQFREFVMYGRFPSTKLMLITFLTSIVIFIIGVIIFKKYQNRITLEL
1908167..1909396                   PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; mru_1457; phage(gi371496158)         1.15e-06            MethanobrevibacterruminantiumM1MDNKNENSNKIKTQLIPSIHNTVSLQAHLTTKDGEPIVGEEVVYKLYSIDKSFLTQYSRITNEEGLVHLTLNIKHKVYIEICYEGSEKYESNNVMTFRTKPSDDEKNVKTKHPLQVQREEKLEQKKIEEKKKNLLDFQQKQKDLESVDEDNIAIELKNVNLSFTIGSDKIDNLKEYVIRTIKRTKEKKTIFKATDDVSFKIYKGEKVGLIGFNGAGKSTLLKIISGVYTPDDGEVIVNGKIAPLLSLGAGFDKNYTGRENIFLNGAILGYNEEFLNSKYDEILEFSELGQFINLPVKNYSSGMLSKLGFSIATIVEPDILILDEVLGVGDVNFKRKSREKLNSLIESNITVLLVSHTISEIRNICEKAIWLENGKIREIGEVNDICDKYLEEAKKVSDDKTKKLKPKRF
complement(1909600..1910280)       PHAGE_Oenoco_phiS13_NC_023560: Bactoprenol glucosyl transferase; mru_1458; phage(gi589286273)     3.27e-06            MethanobrevibacterruminantiumM1MASIVAIIPAYNEEEALADVIAKTSKYVDRVIIVNDGSADRTADVAIEAGAELINHPTNLGKGEALKSGFEAITDDSIIVTIDGDGQHNPDEIPIILKPIIEDGVDLVNGSRYLYGHEENTPAYRRVGQRVLDIATNISAGIKVTDSQSGFRAFSPKARNCFRFKDTGFGIESEMLVDAAEAGLKIVEVPITVRYDVDGSTKDPVTHGVGVLLKIMKDKAVRTFKK
complement(1910366..1911337)       PHAGE_Stenot_vB_SmaS_DLP_5_NC_042082: base plate hub; mru_1459; phage(gi100103)      1.69e-17            MethanobrevibacterruminantiumM1METQRIMVTGGSGFIGTNLVNELRSRGHEVLSVDLLHHEDEADLYSDSYSDYVRGDIRNYRQMERIFDDNDKFDYVYNLAAEYGRWNGEGYYENLWETNVIGLKNMIRLQEKLGFRMISFSSAEVYGDYEGIMSEDVMENRPIKDTYQMNDYAISKWAGELMCMNSATMFGTETVRVRPVNCYGPHEAYSPYKGFIPIFIYKALHGLPYSVHKGHKRIIDYVEDTANTFANIVDNFIPGEVYNVGSKQEWEMTIEEYSDLVLEAVGIDDSLVTYTPAEDFTTKVKTIDFSKAIRDLKHDPKVSPKEGIKRTVEWMKWYYRIED
complement(1911464..1912006)       hypothetical protein; mru_1460                                                       N/A                 MethanobrevibacterruminantiumM1MTNKSPEEEIEELKAQLSKYRKENRILKERCASYEDRIEHFAIERKELSRAITQFESLELELRQYDLEELIQNTRKLNHRIDILRRYLQTEREDNEKLNELINKLTKELDDANYEISRLTTEFHKLRVRKNQRTYFLENRLDIAYTKLAQLKYTLNEFEELGFWDRLRGKKPESYDDIDI
complement(1912123..1912968)       PHAGE_Bacill_SP_15_NC_031245: hypothetical protein; mru_1461; phage(gi100148)        1.12e-94            MethanobrevibacterruminantiumM1MKAVIPAAGLGTRFLPATKAQPKEMLPVYDKPTIQYVIEESVNSGVDDILIVTGKGKRSIEDHFDRSFELEHHLKTKGKEDFLKEIEYISDLADIHFIRQKKQKGLGDAIYCAKKHVGNDPFVVMLGDTITKDTVPCTKQLIDIYEKYEKSVIALEEVPDEKVERYGIIGGEEIEDSIYKIDKLVEKPPLRVAPSNLAIMGRYVLTPDIFDCIENVEPGYGGEIQLTDALSKLDEIYGQVFKGESYDIGNRIDWLKTSLRFALEDDSARDDILEFIKEEII
