gi|00000000|ref|CP001737.1|  Nakamurella multipartita DSM 44233 chromosome, complete genome. 6060298, gc%: 70.92%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
3819084..3819096                   attL                                                                                 N/A                 CCGGCGGGCCGCC
3820047..3820059                   attL                                                                                 N/A                 CTCGGTCAGGCTG
complement(3827691..3829994)       PHAGE_Entero_IME_EFm5_NC_028826: tail length tape-measure protein; Namu_3481; phage(gi971746936)     6.67e-33            MAAFFTDVLVPAGQQAWAWFEENLLPTIQRVGEFISNTFGNLFTVLGGVIDFLAGVFTGDWSRAWDGIKTIFSGIWDQIQNIVSAAWDVVTGIGGRILDWLGQLAPWAWEKISAFGSFLVEKGAQFLQWIWDGITTKAVEVWTWFTALPGSLWEQVQAGAGWLVDRGKDFIQWIWDGITAKFGEVQQWFLNLPSALWGAIQGAWSTATQWGGQLIKYIIDGISGSDPYIAAELSRTLIKAAEAVVPGLGGLIDLTGVDVDKNINDYLSSLSFSRNAANAALSAGLSLVPGRATGGLFGPYDGRTGGQIAVGTHGTADDVLIRGSRNEFMVNEKATAQNLPLLWHINAGGNPADFFGRLPGFANGGLIGSMGMLLGASLVKAILPSLTERVADSTANAAAGSAFIGNGQWGPATDGSSLAANTAAAKAFITQKWGITDIGGVYGGSVPGSDHPIGKALDVMIANYLSAAGIAQGTSVADWFVGNPNAFGTKYVIWRDRINQGGSWAPYQHPSGSNDTLQHRDHVHLSFLTGTGQFSGGAPVAADDKPTGLLGSLASALTSGFMAKVGGITPVTGGSGVERWRSTMLRALGITGQPASYADRGLMQMDSESSGNERAVNTWDRNFPLYGGSKGLMQVIDPTFRQYAIAPWNKDIFDPLSNIIASIRYSLATYGSLDKAWRGVAYDQGGWLQPGGQGVNLLNKPEAVLTPAQSDAYITHAKAVQAGYSGQAPTLVINLDSSDPLQVAVGQMIENSLERATVELEEAGMRR
3830055..3830381                   PROPHAGE_Escher_Sakai: putative transposase; Namu_3482; phage(gi15832212)            2.91e-21            MPGDSTRRYPLELKQRAVRMVAEIAGEHESEWAAMSRVAELLGVGTAETVRKWVRQAEVDTGTRVGTSSEESAELRRLRRENAELKRANAILKAASAFFAAELDRPSH
3830429..3831334                   PHAGE_Burkho_phiE125_NC_003309: putative transposase OrfB; Namu_3483; phage(gi17975200)     1.58e-104           MRWGVEPICKVLSEHLGLRIAPSTYYEHAARPAQTRPAAVRDAALLEQIRRVHTENNHGTYGARKVWLQLNREGVSVARCTVERLMRSAGLVGVRRGKIKRTTVADPGAQRPADLVQRRFGALVPDRLWVADITYVSTWSGWVYVALVTDAYARRILGWRVATTMTTQLVLDALEQAIWTRQRADRTVEHVVAHSDRGSQYTSIRYSERLAEVGIAASVGSVGDSYDNALAETINGLYKAEVIRHRGPWRSIDSVEFATAEWIDWYNHRRLHEYCGDIPPAELEDAFYAHHRAQQTAGLTV
complement(3831362..3832591)       PHAGE_Strept_SF1_NC_028807: hypothetical protein; putative; phage tail length tape measure motif protein; Namu_3484(gi971745080)     1.26e-49            MAYEVGVGVLSIIPSLKGFDAAMDKQLFKPLNKASDQSGSDSGGSFLGGFKGAAMAGIAGIAAAVGAAFVDSYTEALDVRKMQAKAQASLGLTADQAKNLGKSAGNLYAQGYGDSISELTDSVASVQSAFQNLKLPDSQLERLTGKALSFSQAFGGDVETVSQNVNTLLGSGLVKSADEAFDLLTKSSQKVPAALRGDISDASDEYSQFFRTLGFSGDQAFDALVKGADKGTFGIDKTGDAIKEFTIRSTDMSASSVGAFQAIGLDAQTMANKILAGGDDAKGAFDQITDGILAIQDPAAQSQAALALFGTPLEDMNVQDIPEFLKGLKGMSGGMGDAAGAADAMDQAMGSTTSGIELLWRNLKSNLVGFITDQVIPAVSEFTSWLAEKLTPVISEVVAWLGEHLGPVI
complement(3832872..3834308)       PHAGE_Mycoba_PegLeg_NC_021299: terminase; Namu_3485; phage(gi508177873)              6.80e-46            MTVLATDPTFSRVPDGDDTTGREAVELARRYGVGLDEWQAAVICGVLRESGSGWSASQAGLVVGRQNGKGQILLALELAGLLLLRESVLHTAHAVKTSSDAFRRLVAVVDGHDDLTRLVRRRSHQVGQEFLELASGSRVSFTTRSASAGRGLSIDRLVVDEAEDLPAAEVGALAPTVFARPRAQSLYVGTAPGPMHDAEAFTTMRRAAHHGLNPRLAWWEWCAQWGDDIDDQKLWVRVNPAVASGRVPLQAIQDDRSILPPDQFRAERLSMFLPRSSGPVVFDPRRWDELTDEGSAPLRDISIGVDAPPSRDAVTVCIAGRRADDRLHIEWYETASGLGWLPEWVAARLNPQVRAVVVDSRNPCAELDWALAGVRPTLIGTREVVAAAGALFDAVSDGKARHRGQVELTRGILGAVQRPMAGGQGFGWDRKAPGSSALLAASLAVWGVDGEVRKPRRKQPGEPRRVSAGRRGGLGGVQ
complement(3834308..3834511)       hypothetical protein; Namu_3486                                                      N/A                 MSDLSRLEVLRGRLEDVLADPDTSPRDLASVSREYRQTLSAIAELTPAAEGSPLDEITARRRKRGAS
complement(3834789..3835682)       PROPHAGE_Ralsto_GMI1000: ISRSO12-transposase ORFB protein; Namu_3487; phage(gi17546158)     2.78e-07            MHGLLDDEVAAVLALFDEWGETDRSHRKLAHRGSYLGRVWVSPSTVRRVLFLADKHFRPLPKPGRSSKRPFPEWAEYKPNSLWIYDTTHFTRAGMAVLIVEDLVSRKWLSTVVSAEETSTQVQVGFTRALHAEGLLQLVDARHDDGRVDLGVDDEHRPILLAISDNGPQMTSGSTREFMALCAIAQHFGRPGTPTDQAWIESLNGHLKAEYPHLLAIRDPATLRAELDQVRAHYNGVRLHQGIGYVCPNDEHQGRGAQIRKARQAGLETARQRRLTWHREHRNDQHQPPAPEPDDVG
complement(3835877..3836221)       hypothetical protein; Namu_3488                                                      N/A                 MTQPDRGKDRAGRRTKRFLTPSEKYEIWLQLVRQEVTIAEAAEQQQVDRSTIMRIRTVAKEGALAALAASKPGVAAAQRDYEMEAAKAEIARLSEAVKQMAVKLTLVEGKGGWA
complement(3836296..3836448)       hypothetical protein; Namu_3489                                                      N/A                 MPFASSSIRARARRRVAQRVRAGEGCVFCGRPIELSIKYPDPMAFVVFCF
complement(3836455..3837171)       hypothetical protein; Namu_3490                                                      N/A                 MARQKDNPTLDAIKTLLAAGKRSDVRALLAKEDEDAARAYKAIEGNDTLSDIGRRRQLASSYLGRRDRVERELQRLADTCAQQDRSDASSVLGVYGLKGDPASLAISMRDATDRVAEINNAGELNDLLRRADRTGDEVLARAIAARALDIQEPAPLHQFLATRPQLDSAVERLWNANRADTESFDLEMQLAALRPAELLGASLHELERAAEATEPQPAQPTEPTANPYSFTYNSGPIG
complement(3837183..3837575)       DNA binding domain protein, excisionase family; Namu_3491                            N/A                 MIRQFTEFIHGDQVIIPARYAYWLKRSCLDSIRPKVRGADPQLDQILQAISYAGLRWAESGSGTSVAPQAEPMQQSSETVSTATAASILGISDRAVRKAIAEGRLEATQVDGRYRINRNDVERARANRAA
complement(3837572..3837856)       hypothetical protein; Namu_3492                                                      N/A                 MSKQSARNAGIAMGRSLAVLAVNESDPETFTRRIQAALRLVPKDQQVLALDAALVELATKLGQAVGSIDLFAPGFRVEFRDGMNDGLIDSLGLK
complement(3838038..3838253)       hypothetical protein; Namu_3493                                                      N/A                 MTPAELIRASACGPRCLLAATTAKRCTCQCQGHHHGLLLHVHLDALIDARRAGIHHLSDVEIVASTYLEMS
complement(3838250..3839464)       PHAGE_Gordon_Emalyn_NC_031234: hypothetical protein; Namu_3494; phage(gi100057)      3.47e-10            MTKNYWNAAELLATVLPIPKWAVSGVIAEGVTLLAGPPKVGKSWLALNLAVDVASDLGVALGGIDVQQGDVLYLALEDTARRLQGRLRKVLGEHPAPENLHIATEWPGLQDGGADQLDRWLRDHPAARLVVVDVLAKIRGISSANGNQYAEDYAVMNQLKMVADKHGVAVLVVTHVRKMASADFLEQVSGTNGIAGAADCTIVLSRTRGEVHGELDITGRDVEETKYAMIWRPDAGRWDLDGNGLAEAQAAARRAEITIGLGDRSTEIIDFIAQHPDGVRAAAVADHLAIDQDKVRPYLQRLEKSGRILKPSTGLYTPVTGVTTVTAGDNDAGQGPRLGVTPADVGVTPTVTAPPPVSAGHSLGVTPVTPVTGVLKACGHGPLSANGKCGICIADRISAQRTAS
3839725..3840000                   hypothetical protein; Namu_3495                                                      N/A                 MVAPAISYPVGELLAEVGAMGHSVGMERPEDFERIGRNRSVQIIWGEDPEQSIPNVGRGADDGADQLSVIVHKLIRVDRIGRRPAAQQVVV
3840036..3840048                   attR                                                                                 N/A                 CTCGGTCAGGCTG
complement(3840041..3840235)       PHAGE_Mycoba_GUmbie_NC_023746: gp40; Namu_3496; phage(gi609252700)                   5.71e-11            MARHLVTIAAAAEFAAVNPRTIRRRISDGTITAYRVGPRILRVDLNEVENKLLRPIATGGGHAA
complement(3840542..3841423)       PROPHAGE_Escher_CFT073: transposase insF; Namu_3497; phage(gi26249410)               5.92e-39            MAATGAPIRVPVAVTLRVLGLSRAGYYKWLSDPVCQRDYDDAHLIDKLYDLHGDDATLGYRFLTDELEDEHGIQVGENRVHRLCRIAGITASHHKKRSKTGSTGPAPHDDLLAVVDEHGVVRHEFLADAPNKVWLWDISEHPTREGKLYICAIKDVWSNKIVGYSIDSRMKSSLARAAMRNAIALRSPAGTVCHSDRGGQFRAKRTQRLLANNDLVGSMGRSHGAGDNASMESFFSLLQKNVLNTRRWDTRDDLRLAIVTWIETKYNRRRRQRALGKLTPVEFEMIYKAAEAA
complement(3841444..3841731)       PHAGE_Lactob_phiAT3_NC_005893: putative transposase A; Namu_3498; phage(gi48697273)     1.29e-09            MAKPYPKEFRDDVVAVARKGQATLTQIAKDFGISEGSLANWMKQADIKDGRRPGLTDVDRAELRELKKRNRLLEQENEVLRRAAAYLSQANLPGK
complement(3842275..3843381)       PHAGE_Mycoba_Phantastic_NC_024148: integrase; Namu_3499; phage(gi640885298)          1.10e-79            MAKKRGFGQILRLPSKRYRARYTGPDTQLHNAPSTFETREDAEAWLTDERRLIAAGTWAPPAHRTKTIEHRTFGDYATDWLTARPIKPRTRSHYAMLLDKLILPGFESSPLKTITPDQVRAWHTRLGDSTPTLRAHAYSLLRAILTDAVHDGIIPANPAHIRGAGNAKRVHKIKPASLAELGVLVGAMPDAKYQLMTLLAAWCGLRFGELTELRRSDIDAKNGVIHVRRGVVRTDGEVIVGTPKSAAGHRDVNIPPHLLPAVRDYLKANVNGRDGLLFPAADGVSHLAPSSLYRVFYPARKKAGRPDLRWHDLRHTGAVLAAATGASLAELMGRLGHSTPGAALRYQHAAQGRDAEIARRLSQLVEVN
3852652..3852664                   attR                                                                                 N/A                 CCGGCGGGCCGCC
