gi|00000000|ref|CP001876.1|  Campylobacter jejuni subsp. jejuni IA3902, complete genome. 1635045, gc%: 30.57%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(182075..182794)         PHAGE_Bacill_CP_51_NC_025423: putative resistance protein; CJSA_0176; phage(gi725949539)     1.38e-13            CampylobacterjejunisubspjejuniIA3902MFEWIFSIDAWITLATLSALEIVLGIDNIIFLAILVSKLPPEHRDKGRILGLAFAMITRILLLLSLFWVMKLVTPLFSVLGNEISGRDLVLLLGGLFLIVKSIKEIKEQISHQEESQSHFKASNKLWIVVAEIAVIDIVFSLDSVITAVGIAQDVTIMIIAVIIAVAVMLFASKPIADFVEKYPSIKILALAFLVLIGVVLVAESFDIHIDKAYIYTAMAFALVVQILNILDQRKEKNG
complement(182866..183432)         PHAGE_Prochl_P_SSM7_NC_015290: PRGA-formyltransferase; CJSA_0177; phage(gi326784531)     4.75e-35            CampylobacterjejunisubspjejuniIA3902MLVKLAVLFSGNGSNLENILEKLHKKTIGENTYEVVLCICNKKDAFGVQRAKKFGLDTVIVDHKAYNTREEFDTILVQKIKESGANLTVLAGFMRILSPVFTKNIKAINLHPSLLPLFKGAHAIKESYESDMKVAGVSVHWVSEELDGGMIIAQKAFEKRNLSFEEFEEKIHSLEHEILPLSVIEIFS
complement(183423..184793)         putative kinase; CJSA_0178                                                           N/A                 CampylobacterjejunisubspjejuniIA3902MKAIIDNIKILEQNAINKGLDELILMENAGLNLAKLIKKEAKKIRIQRKIRKVKILFLLGGGNNASDGLVALRNLKHAKAYKIGFKENTLFKKQEQILQNYAFKFCKKEPNFKKFHIIIDCILGTGSNRCLDEKTSLIIQKVNQSKALKIACDIPTNLGFYPCFKADITFCMGALKEILLEDFAKEFVGRIKIANLGIRSKKFYPNSQAFLLEKKDLKTIDRKINANKGNFGHIYIVANASAGTLAGLGALNFGAGLVSLVAQKSFSPLLMLKEKIENNASAIALGMGLENLDFLKDEILQNTPLILDANCFLSEALLWYLNRKDVVITPHPKEFIKLYKMCFDENLDIETLQKNRFFYARKFSQNYDCVLVLKGANPIIVQKEKLFVVNLGNQALAKGGSGDVLSGMIAAHLGFGFSALEAAKNATLAHGLVAKKYKFNKNSFDALKLIKGLKCL
complement(184777..185475)         conserved hypothetical protein; CJSA_0179                                            N/A                 CampylobacterjejunisubspjejuniIA3902MENKSIAIFIDAENIPAKYAKSIFDIASDYGEVIIKRIYGDWTQKNIQGWREQIAEYSLIAMQQFNFAANKNSSDMYLITEIMSIFYEKNIDIFVIVSSDSDYTSLIQKLRENKKQVIGMGLEKSIKSYVNAFSEFFYLDKDESKKEDILSKDYLRALINITEQLIDEKGRAEYAQIRTNMNRKYSDFHPQNYGFKNFRALIQKFLPKMKKFEEEREKNIYFLVKKDYESYY
complement(185477..186982)         PROPHAGE_Escher_Sakai: putative ATP-dependent protease; CJSA_0180; phage(gi15833954)     2.53e-87            CampylobacterjejunisubspjejuniIA3902MKKLKCISFHEGLDIIEVESTFTRGLPNLSIVGLASTAIKESVERIKATLLSCDFAFPAKKITINLSPSGIPKKGSHFDLAIALLILLQNEELDDFFVVGELGLDGSIKSTNELFSLLLFLSAKIKKAKIVVPKSIAQKASMIPNLEVYGLENLNEAIEFFKEKNYENFRFSHNHPLFANPLQIENEIFLQNMDFKLDFKDIKGQEKAKRACMIAALGMHNILFEGSPGSGKSMCAKRLVYIMPPQSLSEILMQNAYMSLDSKDCEFTKIRAFRHPHHTSTRASIFGGGTKNARIGEVALANGGVLFFDEFPHFNKQIIESLREPLEDHKIHISRVNSKITYETKFSFIAAQNPCPCGNLFSKNLSCVCSENEIKKYKNHISAPIMDRIDLYVAMDEISKDDKTSISSKEMSEKILQAFIFSKKRGQKEFNGKLKDEDLSRFCVLEKDAKDTLDLAISRYNLSLRSLNKILKVSRSIADLEQSLNISKTHILEALSFRARN
complement(186979..187506)         PHAGE_Synech_ACG_2014f_NC_026927: prohead core and protease; CJSA_0181; phage(gi100217)     6.37e-15            CampylobacterjejunisubspjejuniIA3902MVRKIITYPNPRLFLNSEIVNKFDTELHTLLDDMYETMIASNGVGLAAIQVDIPLRVLLVNIFDENDEQKKEDLLEIINPEIIPLDEEMITCTEGCLSVPDFFEEVKRYNHILLKYQDRFGEFKELEAKGFLAVAIQHENDHLNGHLFIEKISFAKRQKFDKEFKKKKKNHKKEK
complement(187542..188126)         PHAGE_Agroba_Atu_ph07_NC_042013: ATP-dependent Clp protease proteolytic subunit; CJSA_0182; phage(gi100676)     3.03e-76            CampylobacterjejunisubspjejuniIA3902MFIPYVIEKSSRGERSYDIYSRLLKDRIIMLSGEIHDELAASIVAQLLFLEAEDPTKDIYLYINSPGGVITSGFSIYDTMNYIKPDVCTICIGQAASMGAFLLSCGAEGKRFALPNSRIMIHQPLGGARGQATDIEIQAKEILRLKTILNDILAKNTKQKVAKIAKDTERDFFMSAQEAKEYGLIDKVLEKSFK
complement(188126..189460)         trigger factor; CJSA_0183                                                            N/A                 CampylobacterjejunisubspjejuniIA3902MEVKAKQLDSVNATASVKIPSGMIKSEVENLAKKASKSVKMDGFRPGKVPVSAVLKRYERELTQDAEQNLFKSAVNSALQELKKENKELVGEPYFEKFDRKDGEIIAELILSFKPEIKLEGYEKLIPEYQTPKVSKKEIDEKKDELLKRFATPEAIKTKRALKEGDFAKFDFEGFVDDKAFEGGKAENYVLEIGSKQFIPGFEDGMVGMKIGEEKDIKVTFPKEYGAAHLAGKDAVFKVKLHEIQELKIPELDDEMLKKLLPGEEKASVEVLDEKLKEQIKNEKLFKLVNDELKGKFADALIEKYNFDLPKGIVEQETDMQMRAAFNTFSEKEIEELKASKEKYQEKRDSFKEEAQKSVKLTFIIDELAKLRKIEVNDQELIQAIYFEAYRYGMNPKEHLENYKKQGALPAVKMALIEEKLFNDIFIPKTEKSEKVSKKEKEDK
189603..190175                     PHAGE_Pseudo_PaMx25_NC_041953: hypothetical protein; CJSA_0184; phage(gi100037)      4.07e-62            CampylobacterjejunisubspjejuniIA3902MQKKFEDCVKTMLEIIGENPNREGLIKTPNRVFKAYEFLTSGYTQNVKEILNDALFESSNNEMVLVRDIEFYSLCEHHLLPFFGRAHVAYIPNKKVVGLSKIPRLVEVFARRLQIQEQLTEQIAQALMENVDAKGVGVVIEARHMCVEMRGVQKANSTTTTSALRGIFLKNEKTREEFFSLINSAKQVRF

#### region 2 ####
complement(1067843..1068829)       PHAGE_Stenot_vB_SmaS_DLP_5_NC_042082: hypothetical protein; CJSA_1073; phage(gi100085)     2.82e-43            CampylobacterjejunisubspjejuniIA3902MKILISGGAGYIGSHTLRQFLKTDHEICVLDNLSKGSKIAIEDLQKIRAFKFFEQDLSDFQGVKALFEREKFDAIVHFAASIEVFESMQNPLKYYMNNTVNTTNLIETCLQTGVNKFIFSSTAATYGEPQTPVVSETSPLAPINPYGRSKLMSEEVLRDASMANPEFKHCILRYFNVAGACMDYTLGQRYPKATLLIKVAAECAAGKRDKLFIFGDDYDTKDGTCIRDFIHVDDISSAHLAALDYLKENESNVFNVGYGHGFSVKEVIEAMKKVSGVDFKVELAPRRAGDPSVLISDASKIRNLTSWQPKYDDLELICKSAFDWEKQC
complement(1068887..1069681)       PHAGE_Brucel_Pr_NC_019447: putative DNA-PolB associated Exonuclease; CJSA_1074; phage(gi418487886)     9.58e-08            CampylobacterjejunisubspjejuniIA3902MAKNEGYICVFDCESVPDVELIRKTLGFEGSDLEVSLKALQWQKEQSGSEFLPLPYHKIISICAVLSDNFGKFIKVNKIDGQNEKEMIANFFNFIENYEPKLVSFNGKNFDMPVLVLRALKYNLKAATYLDTQSDKWNNYKTRFSELKHCDLLESLGSNGRGIKLDTLCSMVGLPGKYDVHGDEVMKLFYENKLEKIHEYCESDVLNTYMLFLKYELIKANVDEEDYVGFLSYMRDFLCAKKSDRSYTEVFAKACESEISKVRS
1069747..1070775                   lipopolysaccharide heptosyltransferase I; CJSA_1075                                  N/A                 CampylobacterjejunisubspjejuniIA3902MKIAIVRLSALGDIIQSAVVLQFIKNFKKDIEIHWFVDEKFEGILKNHPLINKLYALPLKDKKILKSLKILLKARKNNYNAVIDLQGLIKSAIVSRILSRNNFGFDKNSLKESFAHNFYNQKLELDYNENVFVRYLSLTSFMLNTDFNVKNLAFKQDIFSVDENLKQLLNNKLKLDKNEKNILIHVGSSVENKIYPKTKLAILCKLLINEFQQTKIWLAWGNVKEYEFAKEVLNLSGIDETHIELAPKFNLEELMAFTKMMNLIIGNDSGPTHLAFALNKASITIFGATPSYRNAFQTHINKIIDAGKKIQNAKHIDKSDFCITRIEEEDIFKLAKGLLNEK
1070765..1071652                   lipid A biosynthesis lauroyl acyltransferase; CJSA_1076                              N/A                 CampylobacterjejunisubspjejuniIA3902MKNSDRIYLSLYYILKFFVTFMPECILHFLALIVARIAFYLNKKHRKIINTNLQICFPQYTQKERDKLSLKIYENFAQFGIDCLQNQNTTKEKILNKVNFINENFLIDALALNRPIIFTTAHYGNWEILSLAYAAKYGAISIVGKKLKSEIMYEILSQSRTQFDIELIDKKGGIRQMLSALKKGRTLGILTDQDCVENESVRLKFFNKEVNYQMGASLIAQRSNALIIPVYAYKEDGKFCIEFFKVKDSQNASLEELTLYQAQSCEEMIKKRPWEYFFFHRRFASYNKEIYKDAK
1071649..1073196                   PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; CJSA_1077; phage(gi9630147)     5.27e-07            CampylobacterjejunisubspjejuniIA3902MNLKQISAIIIVKNAKQTLLECLNSLKDFDEIILLNNESSDNTLNIANEFKKDFANLHIYHSAFIGFGALKNLALSYAKNDWILSIDADEVLENECIKELKNLELQEDNIIALSRKNLYKGEWIKACGWWPDYVWRIFNKNFTRFNDNLVHESLVLPSNAKKIYLKNGLRHYAFRDISHLIDKMQYYSSLWAKQNIHKKSGVLKANLRAFWTFFRNYFLKNGFLYGYKGFIISVCNALGTFFKYMKLYELQKQKPKTCALIITTYNQKERLKLVLDSVKNLAFLPNEVLIADDGSKEDTARLIEEYQKDFPCPLKHIWQEDEGFRAAKSRNNAIKASKSEYIILIDGDMILEKDFVKNHLEFAKRKVILQGSRVILNKNESEEILKNNNYSLAFNKKGFKNQRSIFLAKCVYKFSKLTKKFFKKSQLVKGSKTCNMSFYKSDFEAIEGFNEKFIGWGREDSEFVARFLFNDGVFKRLKFNALAYHIYHEENSKNMLEINHQIYLETIKNEKTTWR
1073200..1074372                   PHAGE_Staphy_phiN315_NC_004740: probable ss-1,3-N-acetylglucosaminyltransferase; CJSA_1078; phage(gi30043988)     2.41e-06            CampylobacterjejunisubspjejuniIA3902MKKVGVVIPIYNVEKYLKECLDSVINQTYTNLEIILVNDGSTDENSLNIAKEYTLKDKRIILFDKKNGGLSSARNVGIEYFSGEYETQYIEKENELNVFKIIGDNPQNIYKIYKYKNALASDKLEISKIDYIIFLDSDNYWELNCIEECVVRMQNVDVLWFDHACIYDDGIEDKGQKTRMNVFNFTQECTITPRDYAKQAIKVGSRDISFSWGGMIDFSFLKQLKLKFINKIINEDIHFGMVLFASADSIYILPKRLYLCRLRANSISNHDKKVTKANVSEYFKDLYEFFGENAKEAKNYLKAASRMITALELIEFFKDQKNENSQAIKEAFLPFYVKKALMIKKFKKDPLNLKEKLPIIKPFIQTKIPYDLWKIWQKIKGILDKINFAK
complement(1074356..1075351)       PHAGE_Synech_ACG_2014f_NC_026927: hypothetical protein; CJSA_1079; phage(gi100232)     5.78e-13            CampylobacterjejunisubspjejuniIA3902MQIQQNNSLIYNTLTKKLSSFIPIKSTRRKLRNHIQYKLEHPKVTNYLSNNYINPFLEGKIPHFDFEKKHYFKNDKIIWQFWYQGKNQASPMIQQCFNSVQSQMKDDYTIIILDKDNIKDYLDFPPFVIEKLENNFFGEKTITFFSDLLRVCLLATYGGIWCDASIFLSSKIPSELCDKDFFTFERSKIKPSKEKLKKFIKSGYFSYGYFNWNDDFKVKMLSSFMIAKTNNTFIQTLKDILMNYWKNEQSSENHYYFILHIIFELLKEHGFVNDIYKNMSDIECHLLQFSAKEKFNSTLWEEIQKQSFLHKLTHFKSIKKDSMIDKIILQS
1075409..1076578                   PHAGE_Staphy_phiN315_NC_004740: probable ss-1,3-N-acetylglucosaminyltransferase; CJSA_1080; phage(gi30043988)     9.71e-06            CampylobacterjejunisubspjejuniIA3902MKTVGVVIPIYNVEKYLKECLDSVINQTYTNLEIILVNDGSTDENSLNIAKEYTLKDKRIILFDKKNGGLSSARNVGIEYFSGEYKLKNKTQTIKENSLIEFNIEGNNPYEIYTVYKSYKAFNNEQDLTNFTYPIIDYIIFLDSDDYWELNCIEECVPRMDGVDVVWFDSIEYHDIEKSYFKHHSRLKDINIKKECRINPIEWLKLLRQNKIKDFAFAWSGIIDFDYIKDKKMKFKDAIFAEDHLFGILLFSQAKNIYVYPKVFYYYRIRANSLTNQDKKITKDNILPYFKDIFIAFEENATLAKEYFKYVSWVETSLELVRFVENYHDKKISSLLKDTILYFYIKNAFKIKKFDKDPLCIKEKLQLLKPYKISKIRYKVMKFLISLRN

#### region 3 ####
complement(1361320..1362042)       PHAGE_Synech_S_SKS1_NC_020851: 3,4-dihydroxy-2-butanone 4-phosphate synthase; CJSA_1353; phage(gi472340887)     7.40e-22            CampylobacterjejunisubspjejuniIA3902MIIIFPMAGLSSRFAKAGYDKPKYMLDLKGNSVFFHAVNSFKKYFKNFKFIFVYRDIENTSNFIKEECKKLGIKSYESVRLEQETLGQAHTVRLGLERANIKDDESILIFNIDTFRPNFSLPTTLDFCNIDGYLEVFEADGEQWSFVLADENDNVIKTAEKERISSLCSSGLYYFKKTKDFKEIFDRMKTENDFSKGELYIAPMYNYLIKKGLIIKYHIISLDEIIFCGTPDEYEILISI
complement(1362039..1363562)       PHAGE_Synech_S_SKS1_NC_020851: hypothetical protein; CJSA_1354; phage(gi472340886)     1.14e-18            CampylobacterjejunisubspjejuniIA3902MILITSAKYSSSDFTLEFGKIPPSFLPLGNKRLYEYQIELFKNCNQKVFLSLPSDFKLSKFDEKKLKELNVEILFVPNNLSLGESVVYCLNVCCAFDEKLYILHGDTFFKELVFKENSLQVAKVKENYDWAYLDNEFHTPLKTIEDDLILAGAYGFSHPQFLIKCIVESSYSFVDGMKAYSKAYTFDIIKNDTWLDFGFITSYFHSKKAVSTQRNFNNIDISNGYIKKSSSWQEKIKAEINWFDNLPKELFIYTPKVITYEDSYEIEYLCNNTLAELYVFGKLPNYVWKRIFKSLKEFLDKLHSFKSNDKDINFNCKEKTLKRLQEFSMQSGIDLHKNIVINSKSYPSILTLVDKLDFYMNDIDEFSLIHGDFCFSNIMYDFRAGAIKTFDPRGFDFNGKITPYGDKKYDFAKLVHSVFGLYDFIIAGFFECKVNSDNIEFFIEEDVNILDIQKEFLDVFDIDDNIKALTLHLFLSMLPLHNDFKEKQMAFLSNTFMLYDTFFKESK
complement(1363559..1363957)       PHAGE_Synech_S_SKS1_NC_020851: hypothetical protein; CJSA_1355; phage(gi472340885)     2.96e-18            CampylobacterjejunisubspjejuniIA3902MKTLLIDLDGTLTIDEEHVDYIDKKPNIILIKTLKEYKKQGFKINIFTSRNMRTFDGDLEKIKFHTLPTITTWLQKYDVPYDEIIIGKPWCGYDGFYVDDKAIRPSEFISLNYEQIKELLKKENPHKDGGNK
complement(1363997..1365916)       PHAGE_Synech_S_SM2_NC_015279: capsular polysaccharide biosynthesis protein; CJSA_1356; phage(gi326781954)     2.80e-08            CampylobacterjejunisubspjejuniIA3902MLNNADILVKKAIDNWSYEFLDNFLNNENLSDEHLLLMYKLGRYNFFLENIDYIDRLSSFLNTDSKDLYDFILTCLKDKTVNENFLLGNYKNSYMSFLSSHLDVVDFGDFNFFLKILNEVKKSQDLILQSFFLKNSIDFFYINSSDIFFKGGIYFIMLEIIYNNFLNTLGGRLYYDKLRFIAGRYFISKKSYSGSRIALCLNGQLRPGWRDSIKALIDSFSHLGNIDVFIYSWDVESLWPGSGGNGAGWIRRFFYPMLNECPRELIMSNIDFSKKFPNVFGVISREFNKKIFIKDVLVLDNKIKKVILESYSKVVNRLGELKNDSKIYYGIYQVYKAMEEYEKQNNFKYDFIVRVRPDYIIEKNDIKIEDLHLLELNDIYDARYFCGLDGSLQIGRRSAMEIYMKTWVYAKENKENPYFNTYLKHFPQTCMSPGNGFLSHYVLSQWTDFLKLKVVKMNIKFSHLNHFLFDNISFPDVKNELNKDIWHIKKNKIFNEVQIGKIIDFFDLIAKKYKIISKNRNNLAKIKIQNHLAYKLGQAMIDNSKSILGYIKMPFVLFYIRYKHQKELQRRKTNPELVLPPLEDCSDYEEALKIKNYFSYKLGEALIQASKNWYKGGYVKFLFFDLFALNQNKIKSKKK
complement(1365910..1367769)       PHAGE_Synech_S_SKS1_NC_020851: hypothetical protein; CJSA_1357; phage(gi472340890)     1.83e-62            CampylobacterjejunisubspjejuniIA3902MNIVIPMAGLGSRFAKAGFDKPKPFMDVLGKPMVVRVLENLRYKDARYILIARKEHLIKEKKLVDEIKNNFNVEFIAIDKLTQGTACTVLYARKYINNDTPLMIANSDQIVDVNITDFINDGFKRGLDGSILTFIDKEKNSKWSFVRLKGDLVVEVKEKEAISEFATVGIYLFNKGKIFVESAIDMIIENDRVNNEFYTCPVYNYAIKNGAKIGVYNIEDKQMHGIGTPEDLEKYKKYKEIDELSLITRDQCPITYSKNIEIINSRQFPLFCGCIEQDQKKDIICEEQFAVCRDSGVLFLNKLIPLDILYKNGHYAGNIGKIWDEHHKEFAKFIFQIRPKNILEIGGGHGKLSQFFLEMDNVNWTIVEPNIENKFENVNYIDGFFSKDICNNKQYDTIIHSHVLEHVYDPNEFFSEISSFLNNDKGYMIFSIPNMSKWLKNKYSNCLFFEHTILLDENVVDYILGNNNFTIIVKKYFKEHSIFYLAKKDVRSVKITLENKYLENKVDFGNMLRFYKNKVEYINSYIKQTPKKVYLFGAHLFSQNLIYSGLDTLKIVCILDNDLNKQKKRLYGTKFIVRSPKILINDSNALVILNAGIYNDEIEKDIIENINNKIEIIKC
complement(1367766..1368095)       conserved hypothetical protein; CJSA_1358                                            N/A                 CampylobacterjejunisubspjejuniIA3902MKNYKLDEMIRGWFVGNFDPSVFKTNDVEVGVKEYKKGDTEEKHHHKIATEITVIISGKVRMNDKIYSKGDIVMINPGEVTDFEALEDAINVVVKLPGTNNDKYLGECQ
complement(1368098..1368433)       conserved hypothetical protein; CJSA_1359                                            N/A                 CampylobacterjejunisubspjejuniIA3902MLKKLTEKYISAFNKKDINEVANLLNENFVLEDPVVKRIEGKEECLKAIENIFKNCNKLSFSAKNIFQDKNITFIEFILILDDIRLEGVDIIEWHDEKIVELRAYLDIPKG
complement(1368426..1369151)       PHAGE_Synech_S_SKS1_NC_020851: 3,4-dihydroxy-2-butanone 4-phosphate synthase; CJSA_1360; phage(gi472340887)     7.99e-14            CampylobacterjejunisubspjejuniIA3902MLNIVVPIAGKSYFFDNEKDGFPKPFIEICGKTMLEHFVKNYENVKNKRFIFILKEEDVKRYHLDDAINVLTNNQSKIIILKNETQGMVCSVLMAIDEINLNDSLLIVNMDQIFEYDLNEVISELSLNDAGVLSFESVHPRWAYVKCDENNFVLEAFEKKPVSKNAIAGFYYFNKADFFVKSAFDMIKKDVNYEGKYFIASTLNELILQDKKIINISIDKDRYFTFYSHAKINEYERIKNA
complement(1369145..1369783)       PHAGE_Synech_S_CAM9_NC_031922: hypothetical protein; CJSA_1361; phage(gi100182)      1.75e-42            CampylobacterjejunisubspjejuniIA3902MTKIKAIIFDMDGVLIEAKDWHYEALNRALKLFGMEITRYEHLTTFDGLPTKDKLKMLSLERGLPKSLHSFINELKQQYTMEIVYSLCKPRFHHEYALSKLKFEGYKMAVCSNSIRNSIKVMMKKSALENYLDFYISNEDVKKGKPDPEMYIKAIERLKLNPKECMIVEDNENGIKAARASGANVMIVDEVSEVNYENIKNHICKFEEELKC
