gi|00000000|ref|CP002027.1|  Synthetic Mycoplasma mycoides JCVI-syn1.0 clone sMmYCp235-1, 1078809, gc%: 24.00%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(903530..904828)         PHAGE_Mycoba_LinStu_NC_023714: gp260; MMSYN1_0766; phage(gi593776966)                7.85e-22            syntheticMycoplasmamycoidesJCVIsyn10MKNNYKSLVIVGSQWGDEGKGKITDYFSQKADVVVRFAGGDNAGHMIEFNNKRHKVTIIPSGVFNPKVKNIIGNGTVINLKSLVSEIKRLNESNISTDNVFISDRAHLIFDWHTLIDQLQEENRKENKIGTTKRGIGPTYADKAARYGIRICDFQNPNFKDILKENLDYHNQIITKVYNHEPLDFDVIYNELMTNYQFIKNNIIDSGYEVSNLINENKFVLFEGAQGVLLDIDHGTYPFVTSSNCSANNASIGTGIHNKQINKVLGIVKAYNTRVGSGAMVSEIKTELAHKLRERGREYGSNTGKPRRIGWLDLVALKYAIRVGGIDQLFLTLFDVLDTEAKIKICTHYKLDGKIIDWFPASDYELKKCEPLYEELDGWNQDITKVTSFEELPINAQKYIKRIEEIVKVPFLGFSVGPDRKQTILIKGEFDD
complement(905049..905201)         ribonucleoside-diphosphate reductase subunit alpha (Ribonucleotide reductase); MMSYN1_0767     N/A                 syntheticMycoplasmamycoidesJCVIsyn10MKNYRNNHKFKQGCSSIYYVRIRQDVLEDSENYECDALKFKTFIYLITYI
complement(905182..905697)         GANTC--recognizing Type II restriction modification system (MmyCIV) endonuclease subunit; MMSYN1_0768     N/A                 syntheticMycoplasmamycoidesJCVIsyn10MVKDAKELNSILQKEFDDSWDVIIVPKKVIKNSSIKNSMEPDFLIIQKSSETLNIIELKDGWVFDTKKVAGEYQQLINFQNEISKSISFITKIWICSFNNDSKEEIFLGLKSKVPIKHIMTGEEFCDLLNISKQEIQKERQRDSEKNLNFFVTELLKIDDVRNRIIEELSK
complement(905859..906578)         PHAGE_Bacter_Sitara_NC_028854: DNA methyltransferase; MMSYN1_0769; phage(gi971749745)     4.04e-18            syntheticMycoplasmamycoidesJCVIsyn10MKLSPSVFSNKRTKISELGKDIFKNERMEFNHKYGLDGLVILNNIKDNAIPVVFFDPQYRGVLDKLSYGNEGKRQIKRSELQQMTEEKIVHFIREMDRVLIPTGHLFLWVDKFHLCQGISDWIKDTSLSIVDMIVWDKEKMGMGYRTRRQCEYLIVLQKKPIRAKNVWRLRNIRDVWKEKIVGKVHPHQKPIELQKILIQAVSNPGDVIMDVAAGSFSVLTSCIETGRLFIGTDIKEKQ
complement(906639..907484)         PHAGE_Pseudo_OBP_NC_016571: hypothetical protein; MMSYN1_0770; phage(gi371671514)     1.12e-39            syntheticMycoplasmamycoidesJCVIsyn10MYKKNKKPKYNKEKTICKEIGYFLNKNNEYQIHPFPSTVNKVPKKLPEFITNLTLAFWNNENEIICNLDKWNLKNVTSLNRMFKDAKSFDQDISNWNTSNVVDMQLLFDGAENFNQNLNKWDTSNVLNMEAMFRSAYLFNIDLNKWNTSKVQNMRSMFYEARSFNGDISTWDVSSVKHMEYMFYGVLKFNQDISSWNTKNVINTRSMFKNAIGFNQNISYWNTSNIKEMSWMFHNARNFNQDISSWNVSKVNLFNSFSNNSKIDKNKKYLPKKFISKISKT
complement(907590..909752)         PHAGE_Erwini_Hena1_NC_048828: exonuclease; MMSYN1_0771; phage(gi100048)              0.0                 syntheticMycoplasmamycoidesJCVIsyn10MKENKNTIVLDDVDDEYIKLNARSKIFSKDQDNFQLDVKAAELYLKNYIEPRMKKFSSLKERLDYLLENKYYDSEILNKYSFDQISQLNDYAYSFNHHFPSFMGALKFFNAYGLKTFDTTMYLETYTDRVLMNALFLGNGNFTKAKNLLKDMMLGRFQPATPTFLNAAKKHRGEYVSCYLLRTEDNMESICRTISTSLQLSKRGGGVAICLTNLRETGSPIKNISGLSSGPIPVMKILEDSFTYADQLGQRQGAGAVYISAHHPDIISVLDTKRENADEKIRIKSLSLGLVIPDITFELARDNKDMALFSPYDVQKVYNKPLSDISITEKYYEMLENPNIKKTYISARKFFLTVAELHFESGYPYILFEDTVNRRNAHDKKGRIIMSNLCSEIVQVSTASEYSSDLSFVKTGEDICCNLGSLNIDKMMKSGKEFSDSIYNAISALDIVSRNSDLSAAPSIQKGNAQNHAVGLGAMNLHGFLATNKIMYDSPEAVDFTNMFFYTVAYNAFKASNKLAQEFEKFASFDESRFADGSWFDKYTKCEFDKWTPQTNRVKELFKDYDVQIPSQTDWIQLVEEIKKTGLANSHLMAVAPTGSISYLSSCTPSLQPVVSTVEVRKEGKLGRVYVPAYQINFDNMGYYAMGAYELGADPIINIVAAAQQHVDQAISLTLFMTDKATTRDLNRAYVNAFKQGCSSIYYVRIRQDVLENSENYECDACKI
complement(909739..910212)         PHAGE_Erwini_Hena1_NC_048828: recombination protein; MMSYN1_0772; phage(gi100049)     1.06e-28            syntheticMycoplasmamycoidesJCVIsyn10MHSNVKKVTDKDVIKPVGIPFVVYFSSISNNTHRFIQKLEIENIRIPYELDQSISVNRDYVLVTPTYSGGGEYVEGAVPKQVIKFLNNKENRSFCRGVISSGNTNFGDTFGIAGPIISKKLNVPFLYQFELLGTQYDVSQIKQILLKFWEDGNNERK
complement(910221..911240)         PHAGE_Mycoba_Myrna_NC_011273: gp256; MMSYN1_0773; phage(gi203454817)                 9.23e-125           syntheticMycoplasmamycoidesJCVIsyn10MAKEQKYYHESVSPIEFVKNNFKGNLRSVNWNVINDEKDLEVWNRITQNFWLPEKIPVSNDLSSWRSLSSEWQQLVTRTFTGLTLLDTVQATVGDVAQIEHSLTDHEQVIYSNFAFMVGVHARSYGTIFSTLCSSEQIEEAHEWVVKTETLQKRAKALIPYYTGTDPLKSKVAAALMPGFLLYGGFYLPFYLSARGKLPNTSDIIRLILRDKVIHNYYSGYKYQKKVAKLPVEKQAEMKEFVFKLLYELIDLETAYLKELYAGFDIVDDAIRFSVYNAGKFLQNLGYDSPFSEEETRIEPEIFNQLSARADENHDFFSGNGSSYVMGVSVETEDEDWEF
911539..911823                     preprotein translocase, SecG subunit; MMSYN1_0774                                    N/A                 syntheticMycoplasmamycoidesJCVIsyn10MINLLASTTKLAQQLILGFEIFIFIIAFIMIAIGLLQNKQSQTGLSALNGGNEELFSNSKERGLDKTLSIWMLVLGIIFFIIALTISIITNTML
911859..913973                     PHAGE_Lactoc_Q54_NC_008364: putative ribonuclease; MMSYN1_0775; phage(gi115304286)     1.06e-72            syntheticMycoplasmamycoidesJCVIsyn10MESKIIEILKKNHHKISLNKLLTYFKALDYSLVKNYLDQLEKNNNIAISLENNIYLLDEIYKKGTIKLNPKGFGFINDVNDLTTEDHFIAGVDLNNSIHQDEVVYILKQEEDNRLKAIVIDLIKRNKVYLIGEINRSFDKRFLDFIPNDKSFDSFRFVIVNKNEFKYEEFNIIKAKIISCKERKIFIRLIKIIGNSKKASDRILAIAEEFDIKTSFDKQTLDNAKQINLSTDKLEKEFLKRQNNSLVNKTIVTIDGIDSKDLDDAICVEKLENNNYKLFVAIADVSYFVRYKTSLDKEALLRGNSTYLANKVIPMLPNILSDDLCSLNPNTKKLVFVCEMEFDNNANMLNKKVYESVIISKARLNYDEVNNYFKTKTWTHDDKTKKMLDIAYELYKKLEDLKAKKGTISFDVREPKIILDKNLNVIDIKTKTADQAEKLIEQFMVSCNEAVAELIYQKDLPFLYRNHNKPDEDELINWYKSLKTFGINPKLTNKQVLDPIFINHTLSQIKEQIKDETEVELLNISLLRYMDKAKYGLENIGHFGLASDCYTHFTSPIRRYSDLLVHRYLKQYLITKDLEKTSLENNTNYVNKVSNIINDTETKSVECEREVIKACMCEYMLNKVNNTYTATISAVLKFGIFIQLDNLVEGLVHISNMNSDLVYDETNRILIKPDNTYYRMGQKVKVKLINVDIKKRTIDFVLIE
913983..914429                     PHAGE_Escher_500465_1_NC_049342: HNH endonuclease; MMSYN1_0776; phage(gi100046)      1.81e-28            syntheticMycoplasmamycoidesJCVIsyn10MSEHLIVKNKKAYFNYEIIQTYQAGIVLNGPEIKSIRNHDVSINEAFVLIRKKEIYILNMNVKKYQFANYIKGLEETRTRKLLLHKKEIIKILNKIKQENLTIIPVKLYFKNDYVKLEIALAKGKKLHDKRQTIKKRDTERKELKDYK
