gi|00000000|ref|CP002223.2|  Lactobacillus plantarum subsp. plantarum ST-III plasmid pST-III, 53560, gc%: 38.69%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(1553..2482)             PHAGE_Staphy_StauST398_4_NC_023499: putative transposase; LPST_P0025; phage(gi588498272)     5.26e-57            MSSITYSERIKIETFCELGLSNIQMGVRLNRSPSTISYELSRCQPYQAELAQTDAEYKRSRCGRKTKLSDELKQKILNHLRLSWSPGMIAHEFKLATKSIYNWLNQGRIGFSLNDLPEHGVRQRRNVDQRSKYNQSLGRSIEQRPMMINQRKRIGDFELDTVVGPRGHSKAVLLTLIDRKSRFLWAYRLKDRTTATVNEALTKFLTTFNGPVHSFTVDRGTEFSGLVSLESQYGIKTYYCHAYTPAERGSNERFNRNLRYFYPKGTRFEHISAQDLTTTLLQINQRPLKILDWQTPYQVILTNLSKNSD
2743..3597                         PHAGE_Staphy_StauST398_4_NC_023499: putative transposase; LPST_P0026; phage(gi588498272)     2.09e-27            MFRIYRFLDAGGTIIDYQCHYRKHKQHCGRKPIQLRPDELAYIQAKTQAGWQPDTIINRQERAFSCGVRTLYRLFKRGVLGLSTKDLPMHGKRHPNGYIERRGKAGQLGRDLKNRYQDYPNFNQEFGHLEGDTVQGKNHQGAVTTLVERQTKVAIVLNSHTKSAHDVNRSLAGWLSKLPRHLFKSITFDNGKEFADWRTIANQFDLNIYFAAVGAPNQRGLNENTNGLLRKDGLRHNLIMDQLSDGFVQAVASRRNHIPRKSLGYQTPLEAFISQITDEQLKNF
3604..3723                         hypothetical protein; LPST_P0027                                                     N/A                 MTIREIKNTAFGFRNWENFVNRIKIQRQWLHPARQTVTV
complement(3843..4760)             glycine/betaine/carnitine ABC transporter, substrate-binding lipoprotein precursor(ProX); LPST_P0028     N/A                 MISLKKRILRYLQMATVIICLTAIVSACAKPAEYDSHKKLGPQINYTITGIEAGAGVMANTQTLLSKYKLKQANWQIMPSSTAAMISTLSKAVKNKQPIVVTGWQPHWMVAKYSLKFLKDPKHVYGNGESMRTITRKGLEKDNPGATKLLKNFHWTISMSNPVMLNINGGMNKQKAVNQFIKNHPKQVKAWTAGVPNGHGKKIKLVYTPYDYEIATTTLVTTLLKQKGYKATMQQLDVGVMWNSIANGSSDASVTAELPVTHGLYAKKYKGKYVQLRKNLKGAQTGLAVPKYMKNINTVDDLKNK
complement(4768..5607)             PHAGE_Bacill_G_NC_023719: gp243; LPST_P0029; phage(gi593777699)                      3.67e-06            MNIGQIPLADWINSGVDWLSQFTGFFNSVTIFFQVIIDGIQWAFDFLPQWVFILVVLALTYWVKRGQKKISFMVFEVLGLLLIWNLGYWRDMTQTLTLVLSSSLIAIVVGIPLGIWMAKSSRAEIVIKPILDFMQTLPAFVYLIPAVSFFGIGMVPGVLASVIFATPPTVRMTNLGIRQVPSDLIEVADSFGSTSWQKLIKLQLPLAKTTIMSGINQTMMLGLSMVVIASMIGALGLGTQVYFAVGRNDAGAGFAAGIAVVIVAIILDRITQSFNKTSK
complement(5607..6803)             PHAGE_Bacill_G_NC_023719: gp245; LPST_P0030; phage(gi593777701)                      1.64e-35            MLVEKVKVKNVTKIFGKQISLAKKLLREGKSKAEILSQTGCTVGVNQASFAVNEGELFVIMGLSGSGKSTIIRMINRLINSTDGDIEIDEQGVMGLSKEELRHLRQDKIGMVFQNFALFPHKSVLQNAAYGLELKKFPLDVRNRKAHEALTLVGLTGYDDQYPDQLSGGMQQRVGLARALANDAEILLMDEAFSALDPLYRKEMQDLLLQIQEKMHKTIIFIGHDLNEALKLGDRIMIMRDGHIEQIDNPEDILTHPANDYVERFIEGVDRTKVLTASSVMTQAQVVNIGKAGPRVALRRMRANDISSIYVVDNDNKFVGFADAHDVSDLIKKGSEDLKSVLRTDVPKTSVDMPINALINDISKAAIPYVVLDDDDHLLGIILRSSVLAAIAGEEVSA
7220..8206                         PHAGE_Staphy_StauST398_4_NC_023499: putative transposase; LPST_P0031; phage(gi588498272)     2.21e-56            MSYKHLTIKEREILMFLRTKGLSIRAVALRLGRNPSTISRELKRCAGNYSPSKADNDYHQKRQNCHKKRLLDSHPQLRRQIVHYILDLHWSPEQITALFNKEHQWCVSYNTIYRHIYQHNLGEKYSSRGDTGIQRHLRHKHRTRHSKNTRRHREVQTDYISIHERPGFINQRQRIGDWEIDTVIGRTGHSILLTVVDRLSRLTLIKKVVQKDLQEINKGLVELLGAIPKEFVHSITPDHGTEFLHLDEISERLGVTVYWPDPYSPEQRGTNENTNGLIREYFPKRTDIDNYTEQDVEHCQKQLNQRPRKVLNYETPYEVFFDKPLHLV
8588..9304                         PHAGE_Entero_EFLK1_NC_029026: peptidoglycan-binding LysM; LPST_P0032; phage(gi971766958)     4.58e-41            MKIKNLVLSSTAALALFAISTTVANADTYTVKAGDTVSAIAQAHNTSVSAIEKANKLANVNLIFIGDKLEVNGTTTTTTTSAATSAAPQSATSQATSSAASTTSTTSTQTTQQTTTTQSSAQTSQTQAQPSQASQTQSSQTQTSKPAAQTMTQTSSSTSNYSNNGSDSAAKAWIAGKESGGSYSARNGQYIGKYQLSASYLNGDNSAANQERVANSYVASRYGSWSNAKSHWLANGWY

#### region 2 ####
10140..10154                       attL                                                                                 N/A                 ATTTTACAATCTACC
complement(17683..18315)           PHAGE_Burkho_KS14_NC_015273: gp6; LPST_P0038; phage(gi327198275)                     3.40e-20            MKIGYARVSSENQNLARQIEALKKSGVEKIFQEKVSGKSVQNRPELQKMLEFIREKDIVTVLDLDRLGRNAQDITDTINLIQQKEATLDVLSLPSFTDIQDVNLRGLLTNLVFEIYKYTAEEERNKIHARQNQGIQLAKERGEYKGRRRQYSPHGSKRHLYKRVVQMLRDGTNIAQIARSTGVQRRQIYRIKEYALKIGDLGTPKREVNS
18612..19241                       PHAGE_Paenib_Xenia_NC_028837: transposase; LPST_P0039; phage(gi971748175)            1.69e-24            MTLKQVKRIMSKLGIRCQVRQKKHSRIKQQEQYLQDNVLNQRFSVNQPNQVWLADSTELTYGVNGQYKVRLSGALDLYGRHLIAHKLSEPETSKAKVQVFQRAFNFAGDVHPVVHTDRGSACTSGTFNNFLAQHEVTRSMSRPGMPYDNAPMERWWNEFKLRWIDRHAKPVTYKELVALVEEVINYFNQLDCSPARNDLTPAEYWNEAV
complement(19369..20097)           PHAGE_Entero_phiEF24C_NC_009904: putative ribonucleotide reductase; LPST_P0040; phage(gi158079504)     4.28e-91            MRPDVRTRKEAAVLNDFLMMESIHAKSYGTILTSLNDQATVDEVFKWMNNNPRMQYKAKRINDIYQTGNNLEKKVASVFLEGILYYTNFFTPLWYRGNNKLANLSEVIKLVIRDESVHGTYLGYKFQLGYNELSATEQKTFKKWMDELLDDLLENEFAFTEEVYAPIGLAEDVKQFVHYNANKALQNMGLESRFPNAEIKDINPIVMNGISTETANHDFFSQVGAGYLMGNAEAMSSGDYDF
complement(20334..21260)           PHAGE_Entero_phiEF24C_NC_009904: putative ribonucleotide reductase; LPST_P0041; phage(gi158079504)     2.59e-48            MDYLYYKAINWDDIKDNFDKYMWERLTTNFWLDIRIPITNDQTAWQQLSDTQQQAITRMLAGTSMLAVYQSEVGAPAIRHDRRTQQEESVLNTITFMKSVHAKSCTTIFRALIPGNGGESFTWADDNANLQAEIDQLAQMSTSDMALQKKALFILTETGLSFGKYWTILQTQALVNTYQMLANILRGSALFSAYIGYKFRLRFEELTVSDQTELQYWINTQFDQLMQTEKDFLEANLDDATEAINLASYGANHALMSLGFNAVYEVQPSSLVAQLKELMIDQNQFLQQVTAANNESDTEKMTDDDYDF
complement(21367..23277)           PHAGE_Entero_phiEF24C_NC_009904: putative ribonucleotide reductase; LPST_P0042; phage(gi158079505)     0.0                 MRDHHFRFRSFLGAYKFYTQYAMKTNDGQQFLEDFVDRVVFNALYLANGDEQLANDIADELISQRYQPATPTFLNAGKKRRGEMVSCFLIDVADSMLSIGRGVNSALQLSRIGGGVGVNLSNLRASGDPIKQISNASSGVVPVMKLLEDSFSYSNQLGQRNGAGVVYLNVFHPDILHFLDTKKENADEKIRVKTLSLGLIVPDKYYELLKTNEPMYLFSPYDVEREYRTPFAYIDITKEYNNMAANPNIKKSVFNARKLEQKISQLQQESGYPYILNIDTANQTNPVDGKIIMSNLCSEILQPQEPSKLDDDLSYKTIGTDISCNLGSTNIMNMIDSPDFGHSVEVAVRALTLVTDTTDVKEVPTVKHGNELYHTIGLGAMGLHTALARHQIEYGSPEALEFTDAYFLALNYYSLVTSNRIARERHETFAKFDQSKYADGSYFDQYLNADFKFKSTKVAKIFKNIKLPSVTDWKALKQAVITGGLYHRNRLAVAPNGSISYVNETSASLHPITQLVEQRQENKVGSIFYPAPYLSNETLPYYTPAYDIDQRKIIDTYAVAQKHIDQGMSLTLFMRSVLKPDLYEWKDNNNLKMTTRDLNRLRNYAWTKGIKSLYYIRTFTEDDEIKTANECESCMI
complement(23542..23979)           PHAGE_Bacill_phiAGATE_NC_020081: putative ribonucleotide reductase class Ib, NrdI; LPST_P0043; phage(gi448260994)     3.67e-07            MSGNTKYFISRLTTYFEKERHVRVSSINVKEHPEFTTLDQPFVTFLPAFLKGGNGVNNGYTEILTTILGDYLAYEGNYQHCYGIIGSGNRNFNKQFALTAKQYAKRFDFPYITDFELRGTAHDIPRIADAILTYRNQFCFQTTKE
24245..24256                       attL                                                                                 N/A                 CACCAAAGGCCT
complement(24768..24965)           HD domain protein; LPST_P0044                                                        N/A                 MKKIKTHDDYRHHRSTTINHFYEKLLKLASSMNTRTGKQEASRRTKYMRDFLSEFQMETGVKDET
25554..26477                       PHAGE_Staphy_StauST398_4_NC_023499: putative transposase; LPST_P0001; phage(gi588498272)     1.99e-68            MSTTILSFQNRVVIETLHNEGRSLRYIANYLGFSKTTIFNELHRLNSEYQAGLAQTDFERKVSQRGRKSSLTKNLKHLIEEKIQVHKWSPEQVAHVVGIAYKTVYNWIDQGWLDIQLPDLPDHGIRRHRAKEKRGTFNHGRSIEERPHKVETRQEFGHFEADTVLSGKRKGQAVATFVERKSRLTIVKRLHGRDSQSMTQAVLELASQLQDKLKTLTVDHGKEFANYQTIERRTGTQVYFAHAYSPHERGSNENRNRVLRRFIPKGQAIEELSDHQLVQINWYLNSRPLKCLNWHTPIEIFLLNLRH
26826..26837                       attR                                                                                 N/A                 CACCAAAGGCCT
28710..28724                       attR                                                                                 N/A                 ATTTTACAATCTACC
