gi|00000000|ref||  Isosphaera pallida ATCC 43644, complete genome. [asmbl_id: NC_000000].5472964, gc%: 62.44%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
3529146..3529157                   attL                                                                                 N/A                 CGAAGGCGACCT
complement(3540758..3542254)       PHAGE_Synech_S_CBS1_NC_016164: lambda-like phage portal protein; Isop_2435; phage(gi356870797)     4.36e-30            MLNWLTNLFAQRSRRAPRRAVRAIRARYDAAVTNDDNRRHWANADGLSANAANSAEVRRVLRNRARYEVANNSYARGIVLTLANDVIGTGPRLQMLTDDAEANRRIEQAFAAWAKAVSLADKLRTMRMARAHDGEAFAVLTSNPKLPTPVQLDLRLLEADQVCTPDLAATGANAIDGIVFDAAGNPVEYHVLKEHPGETSRRTFLDYDRVPAASVIHWFRADRPGQARGVPDITPALPLFAQLRRFTLAVLAAAETAADFAGILYTDAPAGGEAEAAEPFEPIELEQRALVTMPGGWKMSQLQAEQPATTYAEFKKEILNEIARCLNMPFNVAAGNSSGYNYASGRLDHQTYFKAIRVEQAHLECVVLDRVLAAWFDEAALIPDLLPAGLGLIADWPHQWFWDGHEHVDPTKEASAQATRLGNHTTTLAHEYAKQGRDWEEALRQRAKELALMQELGLTTPAAQPTPADEEQPDDEQGPDGEEEPTDDDEAELEEQAA
complement(3542257..3542454)       hypothetical protein; Isop_2436                                                      N/A                 MADDLEDKIRENAQGPSKASGDAGSVEQHPLPDQIEADRYLTSKEAVKSKKRGLRFNKLVPPGTE
3542781..3543110                   hypothetical protein; Isop_2437                                                      N/A                 MQTPSSKSSLSPARQRLVELMQDLNFGHIERLEILDSQPVFDPPPRVVREIKFGARNGPRPEAALRDFVLKAQLVEFFACLDTLGDGVIERLEVQHGLPFRVALEEAAA
3543307..3543882                   RNA polymerase sigma factor, sigma-70 family; Isop_2438                              N/A                 MQELFDDLAMKLIKERVKQMIGRNGFTPSDREDLKQEFALHLLECLRRLKEPPQDRQAFLRRVISRFAISLIRRREAQKRDHRRVSSLSKRVVDCDGQRVEMARTIPEDHTHTRLGIAPRSRLEDVELGHDVATVLAMLPPDLRDLCERLKDHSIAEVARQVGVPRTTLHDAISRLRQHFEDAGLRAYLSR
3543946..3544797                   PHAGE_Cyanop_KBS_S_2A_NC_020854: exonuclease; Isop_2439; phage(gi472341475)          3.34e-20            MMLASPWARRNGCSGAPALGRLDFLLREPAEVYHAKSKEYLTSHALADFRENPLLYRKRQLGLVVEEDRPAFQIGRAAHTLILEGRDAYRRQYAFGGPTNPATGKLFDSRSKAYQEWAERQAKPVLTDRQAALVEELAGAVQRHPVAGELLAEGLPESVLRCDYRGVPCQARLDWLNPAKGLVDLKTCDHLKYLEADARSFGYLHQLAFYRALLALAGGEQVPVYLIAVEKREPFRCGVWRIDPNVLAACERDNEAALERLVRCRQLDHWPTGYEELRVFDHI
3544813..3545583                   PHAGE_Entero_EFC_1_NC_025453: hypothetical protein; Isop_2440; phage(gi725950526)     1.27e-34            MSLLAQVQSGKRPAPRRVLLYGTHGIGKSTFGAQSDRPVFVQTEDGLGEIDCDKFPLALSYADALKALEALYTEPHPYRTVVVDSLDWLERLIWAEVCRQRSVENIEDIGYGKGYAFALTPWREFLTGLDALRNDRGMTVVLIAHSRIERFENPETDSYDRYVPRLHKLASQVIQEWCDEVLFATYKVYTKQTDEGFSRKKTKGIGTGERVLYTSERPSHVAKNRLGLPDELPLDWHAYASFFHQPHTTQNGGTNG
3545576..3546031                   PHAGE_Vibrio_VpKK5_NC_026610: hypothetical protein; Isop_2441; phage(gi764162207)     2.29e-37            MADLHGFNANEVDPTTDLEPIPAGKYLAMITDSEMKPTKSGDGRYLQLTFQILEGPYKNRFVWARLNLHNANETAVKIARAELSAICRAVGVLTPRDSCELHNLPLVITVKLKKREDTGELQNEVRGYAKKEAASGQPQQAATNAPPWRRG
3546149..3546598                   PHAGE_Pseudo_PS_1_NC_029066: endodeoxyribonuclease RusA; Isop_2442; phage(gi985757683)     2.01e-28            MLTLELPFPPSLNHYYRHLGHVTLISRRGRAYREAVMALLAAQKIEPMSGPLDLAVELFPPDRRKRDADNFHKCLSDALQHAGVFHDDSQVVRLEISKHEPVKGGKVVVRIQERSTDGRLEDLKSARRYLSRVIEQIEGAVGATPTLPT
3546573..3548318                   PHAGE_Pseudo_NP1_NC_031058: hypothetical protein; Isop_2443; phage(gi100044)         1.19e-110           MQLRPYQREAVEAVYAYLRTHDDNPVVVIPTAGGKTPVMATICKDAVTRWNGRVLILAHVKELLEQAADKLRQVCPEVHFGVYSAGLKRRDTGRAVILAGIQSVYQRAVELGTFDLVLVDEAHLIPPEGDGMYRQFLADAKGINPHLRVVGLTATPYRLKSGLICSPDHFLNAICFEVGVRELIVQGYLCPLVTKAGRARADTSGLHVRGGEYVAVEVEDLMDQDALVRAACAEIVEYTRDRQTVLIFASGIKHGQHVVHVLKEQHGIECGFVSGETPDGERDRLIARFRDQEWARQLQIDFGANAAEPLKYLCNVNVLTTGFDAPNVDCVALLRPTLSPGLYYQMVGRGFRLHPGKQNCLVLDFGGNVLRHGPVDQVRVKEVGGQGSGQAPAKECPQCQSVIAAGYARCPDCGYEFPPPERGKHDAKASSAGILSGQVTTTRYIVQDVFYSVHQKRGAPEDAPRTMRVDYKVGWHEYKSEWVCFEHTGYARQKAVAWWKQRSQEPVPETAEEAVALAQHGRLAPTREITVRSVTGEDFDRIIGYELGDIPPQPDGKDLPEDALDFPFGANAVAAEEEIPW
3548315..3550204                   PHAGE_Entero_EFC_1_NC_025453: primase2; Isop_2444; phage(gi725950538)                1.31e-24            MTPGELLTAALRYAELGYRVFPCAPGNSTPLTDHGFLDATTEVEQIERWWGQHPTANVAIATAGLLVVDLDPAEGNAANPWLKDDPDKRLDLAAAPTAMTPRGGRHHVFRKPAGKGWRCTASRLAPKVDTRTDGGYIIVPPSWRPDGAYSWVPGLELDGPPDRLPEPPPWLVALLDSLAQETPTLAHVAAGGGQANPIPEGQRNATLARLGGNMRRVGMTLAEIAAALLQTNKDRCFPPLSPREVERIAASVARYEPDQIATAMAEGHWDQLMQVQAPQLAPVSLADLTARYPDLRRPVIHGLLRQGETMNVISAPKIGKSWLVTDLALAVATGRPWLDTFACEAGDVLIIDNELHGETSANRIPKVAAARQIGLGDVGGHVFVQNLRGHWQDIFSLGPYFRALEPGRFRVIILDAMYRFMPREMDENDNGTMANVYNAIDRYADLLGCCFVLIHHTSKGNQSGKAITDVGAGAGSQSRATDTHLVLRPHEEDDVVVLEAAVRSWPPVLPRCLRWAFPVWTPADDLDPTLLRSERPRRARRAEADADEAEQPEPSWDAERFAAAFVTGTPKTRDAILAEANAAGLSDWKAERLLRRAEGLGLVHRWASGRNRPSAYANVPQPASEDADQ
3550504..3551844                   PHAGE_Strept_EJ_1_NC_005294: transferase; Isop_2445; phage(gi39653711)               4.96e-90            MKIELRKLSEIKPYPNNPRLNDDAVEAVAASIREFGFRQPIVVDAEGVIVVGHTRYKAALKLGLEMVPVHVATDLTPEQIKAYRIADNKSAELSDWDYDLLPVELGELQGMNYDLGLLGFDQDELARLLDPGVKDGLTDPDEVPAPPDEATTRPGDLWLLGDHRLLCGDSGKPEDVDRLLNGAVIHLVNTDPPYNVRVEPRSNNAIAAGLSSFEVTHHQKMDVVRHPEKAKPTGKKLRAKDRPLANDFVSDEVFEKMLHAWFGNLARVLESGRAFYIWGGYANCANYPPVLKATGLYFSQAIIWVKEHPVLTRKDFMGNHEWCFYGWREGAAHVFLGPNNAVDVWSVKKVNPQSMIHLTEKPVELAVRAIQYSSRPGENVLDLFGGSGSTLIGAEQTGRKAYLMELDPLYCDVICERWCKFTGKEAFRVDPQGNQTPRSELLAGRA
3551786..3552265                   PHAGE_Erwini_Ea35_70_NC_023557: hypothetical protein; Isop_2446; phage(gi589889651)     1.24e-08            MLILKEIKPRAPSCSPGERKVGGNRRPRSWTICPVCLGIFPLPHLRRRFCSYPCKVTAQATGRQTVRRTIAKARTAQSLLRYHVQAGNIVRPDACEECGATDRRIEAAHFNYDEPLRVRWLCVPCHRRWDKSEPKHATVIIQRREKFTGRKAERGNGHA
3552258..3552647                   PHAGE_Caulob_Cr30_NC_025422: hypothetical protein; Isop_2447; phage(gi725949290)     2.29e-17            MRDYSLHDSGERQQFATGAVRDRQAGKGRFDLLPPLAMNRLARHFEKGAAKYGDRNWERGIPLSRFLDSALRHLFAYLAGRDDEDHLVAAAWNLLAALETDARAAGGRLPPELVDIGPQRPDGTKEAEA
3552644..3553087                   PHAGE_Caulob_karma_NC_019410: DUF1937 protein; Isop_2448; phage(gi414089497)         1.41e-08            MIYLASPYSHPDPAVREQRFRAACRAAVALLCAGQVVFSPITHSHPLAQHGLPGSWQFWEQYDRKFLERCDEVVVLMLDGWEESVGVQAEIRIARELGKPVRYLAPELAPVSPTLAHVASGSPEADPTPIGADRPPTLAHVASEVPG
complement(3553157..3553336)       hypothetical protein; Isop_2449                                                      N/A                 MTTNNHPIEPDGYDRVAPGFACPSCGEDDIDSLVWIDDDKVRCDSCGTVYDPNQPDAEA
complement(3553351..3553686)       restriction endonuclease; Isop_2450                                                  N/A                 MAKKKTPKTEAPADAGKKAPKAKPAKAKPEAEAKPKKVGCLDAAAKVLGETGQAMTCQEMIDAMAAKGYWTSPNGKMPAATLYAAILREITTKAKESRFTKTERGKFALAK
3553827..3554051                   hypothetical protein; Isop_2451                                                      N/A                 MMAEDREHSPTGGLNPNALSVADAARLLTRIGGRPVTAEMLQADIGAGAPTNADGTINLVHYAAWLLKETGRGD
3554041..3556308                   PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766: terminase large subunit; Isop_2452; phage(gi971741528)     2.02e-27            MAIDPRKLRPSELCRLLNSTPLGEVINERQLHRHRSRAGLRIGDARHMDLLRYVAWLVQLRHAPRPEPDGDPYEKLKGRARARNIALSLAGRDIGELPAVVNPGRKAQAESNFRFFCESYFPLTFHLPWSKDHLKVIARIEQAVLRGGLFALAMPRGSGKSTICECACIWAVLYGHREFVCLIGSDEGHAMDMLDSIKMELDGNDLLLEDFPEVVYPIQCLDGIANRCKGQLYKGERTHIGWTAREIVLPTVPESKASGAIIKVAGITGRIRGMKYKRADGKTVRPSLVVLDDPQTDESARSLSQCATRESILAGAVLGLAGPGKKISGIMPCTVIRPGDMADNILDRDKHPEWNGERTKMVYSFPANEKLWQQYAELRAESMRQGNAGEEATEFYRQNREAMDAGAVVAWPERFNHDELSAVQHAMNLKLQDEAAFFAEYQNEPLPEEVAGDDELTADQIAGKLNRMKRGEVPIGCNHLTTFIDVQANLLFYVVAAWEDDFTGYVIDYGTFPDQKRPYFTLRDARLTLAGVTGAAGLEGAIYAGLEKLTANLLGRAWRRDDGAELRIERCLIDANWGSATDVVYQFCRQSAHAGIVLPSHGRFVGASSQPFSEYKRRPGDRVGHNWRIPNVHGKRAVRHGVFDTNYWKSFVHARLAVPMGDRGCLSLFGDKPEMHRLFAEHLTAEYRVKTEGRGRTVDEWKPRPERGDNHWLDCLVGCAVAASMQGVVLPGTDGQAPAKRERLSFAKMQKTKRR
3556383..3556589                   hypothetical protein; Isop_2453                                                      N/A                 MRPFDDSDLTPPDRFREIAALLAVGVLRLRARADAADPGQHSAPENPEKTGNSCLELSEKTVLSVHTG
3556622..3557119                   putative bacteriophage related protein; Isop_2454                                    N/A                 MDTNVGKELAALQRLTVKELRTRYAEVFGEATNANNRAWLVKRLAWRLQALAEGDLSERARRRAAELASDADLRLNPPKALPAVPASERTTAHVLAFRPDDRLPPPGTVLTRRYKGEVLQVKVLPHGFEYEGEVYGSLSAVAKAITGSHCNGYLFFRLGDKGGDA
3556777..3556788                   attR                                                                                 N/A                 CGAAGGCGACCT
3557116..3558708                   PHAGE_Entero_EFC_1_NC_025453: site-specific integrase; Isop_2455; phage(gi725950572)     4.89e-47            MNRNIKNPKPATLPVVRCAVYTRKSTEEGLEQEFNSLDAQREAGEAFVASQRQEGWTCLPERYDDGGFTGGNMERPALQRLLADIEAGKIDCVVVYKVDRLSRSLLDFAQMMQTFDKHRVSFVSVTQQFNTATSMGRLVLNVLLSFAQFEREIISERTRDKIAATRRKGKWAGGHPLLGYDVDPRGFRLVVNEAEAVRVRAIFNLYLEHEALLPVVQELERRGWVNKRWTTRKGRERGGQPFERTSLYRLLTNVAYVGKVRYKDEVHDGEHPGIVDPADFQRVQTLLQRNGQTRGAPVRNKFGALLKGIIRCVPCDCAMTPSHTTRNGSKRYRYYVCSSAQKRGWNTCPSKSIPAAQIEEFVVGQIKCIGQDRALLAEVLAQARQQDGARTSELEAEQRSLEKDLTRWHAELRKLSCQLRPGDDNGSIISRLADLQERIGLVEGRMRKVREQIQTVQQQLLDEEETAVAMSVFDPVWEALTPREQARVIGLLVERVDYDGASGKVSITFHPTGIKALAQQLADQRREKTA
