gi|00000000|ref|CP002487.1|  Salmonella enterica subsp. enterica serovar Typhimurium str. 4878013, gc%: 52.18%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(1056421..1056660)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; STM474_0993; phage(gi169257270)     1.19e-52            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MRLINRSKQSPLGRRACDVALAAHHEKFGDYGRQKHVTNYTVVVDGVKVPVEVVNRATSYVATAMIGVRKLRNLPAQAN
complement(1056703..1057860)       PHAGE_Phage_Gifsy_2_NC_010393: conserved hypothetical bacteriophage protein; STM474_0994; phage(gi169257271)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MCAALKRCAYRHKGKIMENTNIVTTEQQAPNTISASNAIFNVQALGQLTAFANLMADSQVTVPAHLAGKPADCMAIVMQAMQWGMNPYAVAQKTHLVNGVLGYEAQLVNAVIASSSAIHGRFHYRYGGDWERCTRTQEITRDKNGKNGKYTVTERVRGWTDEDEIGLFVQVGAILRGESEITWGEPLYLSGVVTRNSPLWVSNPKQQIAYLGVKYWARLYCPEVILGVYSPDEVEQREEREINPAPVQRMSVQEITSEVSTRTSAQESAANVDAVADDLRERIDTASSVDQAKAIRADIESQKALLGTALFTELKNKAVKRYYQVDAQNKVEAVINSIPNPGEPEAAEMFAKAESTLGAAKRHLGDELHDKYRVTLDDMKPEYIG
complement(1057823..1060708)       PHAGE_Phage_Gifsy_2_NC_010393: putatitive bacteriophage exodeoxyribonuclease VIII; STM474_0995; phage(gi169257272)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MSGTNPVFLVRKAKKSSGQKDAVLWCSDDFEAANATLDYLLIKSGAKLKDYFKAVATNFPVVNELPPEGELSLTFCDYYQLAKDNMTWTQIPGVTLPSSEAAAAARQHIVDGVDTETGEVLEDHTENFGNESNSPAQATAPAPELTVVATMPLRHRVLAQYIGEGEYLYHVDASQKKEILRLEMDTDNSYVQNLLLAAENVEAFKKAIEHDIHKIVNAVKKVFPVDGKTPELATVIQFLKTWFETEHIDRGLLVKEWAKGNRVSAIQRTESGANAGGGNKTDRNPDYEHTLDTLDVEIAMATLPMDFNIYELPGSVYRRAKEIVKKKESPFKEWSAALRATPGILDYSRAAIFALIRSAHPEFYHYPGRLQGYINANLTETDHENPTEEALTAARHTPEKDAVEEANRQLAAARGEYVEGISDPNDPKWVKTGTSQPTTEPELVKNVGNGIFDVSALMQNSSTHGTETNPETTSNVQVQKADSDEKQAGDAVQAGEDDLGTGKEAVTVENQNQAEAQQNVPESQQEEPEAAWPEYFEPGRYEGVPNEVYHAANGISSTQVKDARVSLMYFNARHVEKTIVKERSPVLDMGNLVHALALQPENLEAEFSVEPEIPEGAFTTTATLREFIDAHNASLPALLSADDIKALLEEYNATLPSQMPLGASVDETYASYEQLPEEFQRIENGTKHTATAMKACIKEYNVTLPAPVKTSGSRDALLEQLAIINPDLVAQEAQKSSPLKVSGTKADLIQAVKSVNPAVVFADELLDAWRENTEGKVLVTRQQLSTALNIQKALLEHPTAGKLLTHPSRAVEVSYFGIDEETGLEVRVRPDLELDMGGLRIGADLKTISMWNIKQEGLRAKLHREIIDRDYHLSAAMYCETAALDQFFWIFVNKDENYHWVAIIEASTELLELGMLEYRKTMREIANGFDTGEWSAPITEDYTDELNDFDVRRLEALRVQA
complement(1060835..1061134)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; STM474_0996; phage(gi169257273)     5.83e-52            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MKNSPLIWRGFIHPEFKTGEIMEIVKIEMNLKAVNKSIALFNCENLDGGYVLGKFDSPHCAVKAISLLTVKVSDGEQAGFGNYRSYKLDYSEKFYQTIH
1061436..1061582                   hypothetical protein; STM474_0999                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MPYRRPAERFTPDNDALVVDETNDKTKGSICKAKSATKSSILEHKNST
complement(1061617..1062027)       PHAGE_Phage_Gifsy_2_NC_010393: putative bacteriophage regulatory protein; repressor; Lambda gpCI analog; STM474_1000; phage(gi169257276)     3.23e-96            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MNKNLHPIFAKRIQQVLDENGWSMADLSRRVMLSHTSVRKWASGTSVASGERLKRLSAVTGRPEYWFFMEPGDESEGERAEPKPRVLDEKEETLLSLFNQLPEAEKLRVILHTKAVLQEMDLLKNNVFDLINDLKK
1061983..1062096                   hypothetical protein; STM474_1001                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MLDTLGENGMKIFVHIHILQPSVSLFIGTIRLIFVGT
1062352..1062726                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage transcriptional activator; Lambda gpCII analog; STM474_1002; phage(gi169257278)     3.88e-72            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MAYQAKRHQPNNHRGYLPMENAIARKLDPPEINPIEIESVLLNRLASVGQKSYAEHMGISESTVSRRKAEGYFCNMAKELAFLGIQAAPPEAVLVSRNYLTAVEILADAGLKAERARPDALGWD
1062811..1063794                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA replication protein; Lambda gpo homolog; STM474_1003; phage(gi169257279)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MSMSNTAEIYKFPAPIPTQQECRMADLENGYLRLANQIQDALCIVELSGREFRVLNAIIRLTYGWSKKSDRIANSLIADKTTLKVKHVSEAVLSLAYRNIIILRRIGQTRYIGINTNLDKWAYSKPHCSKCPVSFPDDEIATWIISVPETRDSYPRKGGRASPKTGIVIPENRDSVLPHSAIPENGDSYPRKEGRASPKTGNTKDIIPKTNIKDLTPFNPPKGKVKFDPLSIPVPEWLNAASWNEWVTYRQQSGKPIKTELTVTKAFRLLKECLDEGHDPVNVINTSIANGYQGLFKPKFALNDRRAGRDVNHISAPDKTIPTGFRG
1063797..1064546                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA replication protein; STM474_1004; phage(gi169257280)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MKNVIGTGSALDRLKRIIPASVQPKFSTADEWRAWQEAEGRKRSEELDRMNQKSRTEKIFGRSGIQDLHRSCTFANYEVSGEGQRKAYTMAKSYAQNFGSGFASFVFSGGPGTGKNHLAAAIGNHLLAGGHSVLVVTIPDLMLRVRECYDGGQSEASLLDDLCKVDLLVLDEVGIQRGSSGEKVILNQVIDRRLSSMRPVGVLTNLNHEGLLDSLGARVIDRLQMDGGMWVNFDWESYRKNVSHLRIVK
1064557..1064904                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; STM474_1005; phage(gi169257281)     6.28e-80            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MARPKTQSERMIILERIIGLVKEQGRITTNDVVAIFGVHRTTAEKYLRIALERGGFIRHGRCGIFRDQRAVIDYDLRRYSSSQVTGFSALPVLEKSPVMQVYGASKMSINKGGAQ
1064901..1065212                   PHAGE_Phage_Gifsy_2_NC_010393: conserved hypothetical bacteriophage protein; STM474_1006; phage(gi169257282)     4.88e-70            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MSNIDKRALREVAERATPGNWRRTSSLFNGITVTPFSLCGEEVTLAHTVEKRDAEFIAAANPATVLALLDVLYEFGEDEVAISEYVTNLEDALRVAAAPQQEE
1065287..1065580                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; STM474_1007; phage(gi169257283)     2.20e-59            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MMNYEDKLMYQRMIFEEGKEPRLYSSQHDSKFIPISNNNGKVQKVPVMEFKDTRGDVFYAYNYAYSGKKPSNDEIYKAIDELKPIGEKFEMSKTISD
1065872..1066105                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage damage-inducible protein DinI; STM474_1008; phage(gi169257284)     4.20e-51            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MRIELVISRAKQLPEGAVPALEKELITRLQNQYENCNLTIRRGSQDGLSIVGAADGDKKRIQSILQETWESADDWFY
1066521..1067123                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; STM474_1009; phage(gi169257286)     2.21e-147           SalmonellaentericasubspentericaserovarTyphimuriumstrST474MAHELQLIKQSSGILIPATPETSEILQSKIKLGAVLVAEFRQVRNPAFHRRFFALLNLGFEYWEPTGGTISANERKLVNGYAKFLAAYGGNESALLDAAEQYLEQIANRRVTNGISLCKSFDAYRAWVTVEAGHYDAIQLPDGTLRKHPRSIAFSSMDEVEFQQLYKSALDVLWRWILSRTFRTQREAENAAAQLMSFAG
1067120..1067329                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; STM474_1010; phage(gi169257287)     1.14e-44            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MMAMKYSWFHHHDCTTEQADTLISDYQKRGVRTEKSLNPDFITWTVSAKLPEYAHRVRTPKSLRQKVWG
1067326..1067943                   PHAGE_Phage_Gifsy_2_NC_010393: NinG; STM474_1011; phage(gi169257288)                 1.09e-147           SalmonellaentericasubspentericaserovarTyphimuriumstrST474MNMAKLPRRKCANKECRQWFHPIREGQIVCSYQCASAVGKEQTRKAREAAQRKAQSLQRAAEKKERAAWRQRKAAVKPLKHWIDLTQRAVNDICRETELAEGLGCISCGTKTAFAWHAGHYRSTAAAGHLRFTRFNIHLQCDVYNVYKSGNIEAYRAALVERYGEAAVLALENNNTPHRWTVEELKEIRLAALADLRALKKLEAA
1067940..1068086                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; STM474_1012; phage(gi169257289)     1.09e-26            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MKPELIEILRMRWLRLRIYRYRGSFPVAYRILRNYVRIEAKREHRNES
1068076..1068873                   PHAGE_Phage_Gifsy_2_NC_010393: prophage antitermination protein; late gene regulator; Lamba gpQ homolog; STM474_1013; phage(gi169257290)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MNLESLPKYFSPKSMMPGAVPCGITSDTLTITDVMASLGLLTAKAAVGIELYLAKAGVLSSENIIAYIRQLAEQRAERHGALRKMEKGKRSKFLDTMARYVFRDYSLSAASLVTCSSCHGAKLIDAEVFTNKVTYPDGKPPKWVKDTKGISPSDWEVWKSVREQVRVVCKACDGKGHVKNECRCRGRGEILDKKKSELQGVPVYKKCPRCKGRGYPRLKDTEIFKALGVTEMVWRYNYKLFFDRLVEHCHIEESYAEKVLGNVTR
1068940..1069257                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; STM474_1014; phage(gi169257291)     8.35e-76            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MPVTLQELRTSPRRGFCFFWWYIPLVSNHRGGDMGFYYVFQYKPKGMSSGKHLNVSEEFSDRNEAKRAKSRHMINDPDCVFSGIVQADSPAAVLQEVQAESLNRL
1069431..1069556                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; STM474_1015; phage(gi169257292)     7.66e-23            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MKMHNDPHSMDSQSIFAGSQLLPMEKTSHLALSVGFRSHLA
complement(1069692..1070141)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; STM474_1016; phage(gi169257293)     2.23e-107           SalmonellaentericasubspentericaserovarTyphimuriumstrST474MKNTALGKFIFIVGTALLLGGCSGMVMPPYATHGTSVGIIAPAGGYSEWHTDSRNHTTGDSHSQSQGNCTQSEDSQLNENGLTRTHQSNCNTRSQTHSSSTSKTRSSSVGFSVGGPVGASIGLIKQMESMNRAPANDMSSNEMFKNFGF
complement(1070502..1071188)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage virulence determinant; GtgA; STM474_1017; phage(gi169257294)     3.63e-170           SalmonellaentericasubspentericaserovarTyphimuriumstrST474MPTGIKPIFINNMMSTYGLSHPHDSKVFPDLPEHQDNPSQLRLQHDGLATDDKARLEPMCLAEYLISGPGGMDPDIEIDDDTYDECREVLSRILEDAYTQSGTFRRLMNYAYDQELHDVEQRWLLGAGENFGTTVTDEDLESSEGRKVIALNLDDTDDDSIPEYYESNDGPQQFDTTRSFIHEVVHALTHLQDKEDSNPRGPVVEYTNIILKEMGHTSPPRIAYEFSN
1071545..1071793                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage lysis protein; holin; STM474_1018; phage(gi169257295)     1.79e-52            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MAGLIAYGRLIYDGATRKNKWLEGVLCGALSLCVTSALDVVGLPVSISPFVGGIIGFVGVDKLREIAISALKKRAGVNDENQ
1071765..1072229                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage lysis protein; endolysin; lysozyme; STM474_1019; phage(gi169257296)     2.62e-107           SalmonellaentericasubspentericaserovarTyphimuriumstrST474MQGLMMRISEKGITLIKEFEGCSLTAYPDPGTGGDPWTIGYGWTHSVDGKPVKPGMMIDEATAERLLNTGLVGYENDVSRLVKVKLTQGQFDALVSFAYNLGARTLSSSTLLRKLNAGDYAGAADEFLRWNKAGGKVLNGLTRRREAERALFLS
1072226..1072726                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage lysis protein; Lambda gpRz homolog; STM474_1020; phage(gi169257297)     7.87e-115           SalmonellaentericasubspentericaserovarTyphimuriumstrST474MMFNWKTMFVGLLLVSLIVAGRLANHYRNNAITYKEQRDTVTHRLTLANATITDMTKRQRDVAALDEKYTKELADAKAENDALRDDVAAGRRRLYVNATCPAVPTGKSTSTARMDNAASPRLADSAQRDYFALKERVKTMQKQLEGAQAYIRTQCHGNAGKTSNQW
1072934..1073467                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA packaging protein; terminase, small subunit; STM474_1021; phage(gi169257298)     1.24e-127           SalmonellaentericasubspentericaserovarTyphimuriumstrST474MDQEIKSLELNITQLSAITGAHRQTIASRLKGVKTSGGNGSNLKIYRLVDILTAMMTMPAVTGENDPNKMKPSDRRAWFQSEMTRIELEKEMRTLIPASEVLSVYAVMAKTVVKTLEILPDLLERDAALPPDALEMTQKIIDQLREDLASMTYQACADAINGDDDDNGDEGQEEEQE
1073421..1075562                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA packaging protein; terminase, large subunit; STM474_1022; phage(gi169257299)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MMMTTVTKGKRKSRNSLASAVVAGCDISSMFRPPRRMKISDAVRKYMRVPRDAGNSVAWESTLTPYVVEAMNCLSSRSYDAVVFVAPARTGKTLGLIDGWISYNIVCDPSDMLVVQMTQDKAQEHSKRRLAKMFRHSPAIARRLSPHRNDNNVHDKTFRDGSFLKIGWPSINVFSSSDFKCVALTDYDRFPEDVDGEGDAFSLASKRTTTFMSLGMTLVESSPGREITDTRWKPSSPHEAPPTTGILSLYNRGDRRRWYWPCPHCGEYFQPSMANMTGYRHIADPMEASEAARIQCPHCHKLTEPQQKRELNNRGVWLREGQHIDRDGNITGEARRSRIASFWMEGPAAAYQTWAQLVYKLLTAEEEYERTGSEETLKAVINTDWGLPYQSRRSLEARSGDALMARAEDVSKRTVSDGVRFIVATVDVQGGKKRRFVVQVVGYGAYGERWIIDRYNIRYSLRVNEDGESQPVNPAARPEDWDLLKTDVLEKTYPLAADPEQFMPVLAMAVDSGGEDGVTDNAYAFWRRCKRKGVAGRVYLFKGDSTRREKLITKTYPDNTERSERRAKARGDVPLYLLQTNALKDRVAAALEREEPGANYIHFPDWLGPWFYEELTYEERSADGKWKKPGRGNNEALDLMCYAHALAILRGYERINWEKPPGWARLPEKDAAKTTQPVEVRQQEQHEGGEKAVKARKKKILPAWGGGSGGGWL
1075975..1077309                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage portal protein; STM474_1023; phage(gi169257301)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MVGALDKMEERVIGAKGIIVEPQPLTVAGTLNNALAEQIRARWAEWSVSPDVTGQYTRPVLERLLLRTWLRDGEVFSQMVAGKMPGLEPVAGVPFWLEAMEPDYVPMEQTDSTNNLIQGIYFNDWQRPKSYIVCKSWPGFATAMVATKLIDAENMLHLKFTRRLNQARGVTLLAPVIIRLLDLKEYEDSERLAARISAAFAMFIRRSDAMVQDGDAPDYADKDRDLDIEPGTILKDLLPGEDIGTIKSDRPNANLESFRMGQLRAVAAGVRGSFSSIARNYDGTYSAQRQELVEAQEGYAILQDNFIAAVSRPVYRRWLATAITAGVIDVPTDTDMATLFNAVYSGPVMPWIDPLKEANAWRILIRGGAATESDWVRARGGAPAEVKRRRKAEIDENRKLGLVFDTDPAHDPGEQDNVGSEDNSGGDKNAAGDDSRERTRGGKQ
1077185..1079314                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage Clp protease involved in capsid processing; STM474_1024; phage(gi169257302)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MILIRHMTRGNRIMSEVKTTVAAIKMPPVMTAGNGRGEGSSNSWYSIRAAANNTAEVRIYDEIGGWGISARWFAEELAALGQINRINLHIHSPGGAVLDGIAIYNLLKNHPAQKTVYIDGMACSMASAIAMVGNPIIMPENAMMMIHKPRGVAGGEAEDIREYADLLDKIESVIIPIYTEKTGKTPEDIAAMLAKETWMSGAECVSEGFADKLIQPVKAMACIHSKRVEEFEHMPQSIKGMIIAPQGNAGAQPQPQAKAPESQIQSQAQSLVTVDENAIRARLQEEQRNRITGIQNVFSLSGDRYASLMAKCIADVDCSLEMAKDRLLAEMAKGITPTNQLNGPQNRAEFHAGMYTGNGNITGDAVRAAVMARAGYEEAQKDNPYNCMTLRELARISLVARGTGVSSMNPMQMIGMAFTHSTSDFGNILLDVANKSILQGWQEAPETFDAWTKKGQLSDFRIAHRVGMGGFSSLRQVREGAEYKYVTTGDKQATIALATYGELFSITRQAIINDDMNMLTDVPMKLGRAAKATIADLVYDVLISNQKLSSDNVALFDKTKHANVLEKAVMDVASLDKARQLMRMQKEGDRHLNIRPAFVLVPTAMESVSNQVIKSVSVKGADINAGIINPVKDFATVIAEPRLDDASQSTFYLTAAKGSDTVEVAYLNGVDEPYIDQQEGFTVDGVTTKVRIDAGVAPVDYRGMVKCTV
1079405..1079728                   PHAGE_Phage_Gifsy_2_NC_010393: conserved hypothetical bacteriophage protein; STM474_1025; phage(gi169257303)     7.08e-70            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MAKNYVEDGKTIEIVATTSLKSGDLVQVGDMFAVAVTDIAAGSAGTGIAEGVFSIPKLTTEDIAVGKKVYLKDNVVQTDATGSLPYVGVVWAPAANGDETVPVKING
1079721..1080020                   PHAGE_Phage_Gifsy_2_NC_010393: conserved hypothetical bacteriophage protein; STM474_1026; phage(gi169257304)     2.90e-65            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MADLFDGMKRRMDALIAERFGMKVNINGTDCIVVESDFLAELGPVEGNGKNVVVFSGNVIPRRGDRVVLRGSEFTVTRIRRFNGKPQLTLEENNGGKGA
1080001..1080567                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage morphogenesis protein; Lambda gpZ homolog; STM474_1027; phage(gi169257305)     1.31e-134           SalmonellaentericasubspentericaserovarTyphimuriumstrST474MEVKGLKEAISVLKELDRGYVTRAKIRAINRVAKRVVSVSVRSAAALVVAGDNRRQGIPVRTVRRRARVRLARADKPFANIYVNCDPLTAIRLLSSPPSTPMRGRKGKPLRIGKYRFDRGFIAQAPNGWWQVFERSGAGRYPLNVVKIPVADALRHAFNTQVVLQMKTEMPKELKHEISYELRRFTKK
1080564..1080965                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail shaft stabilization protein; Lambda gpU homolog; STM474_1028; phage(gi169257306)     5.47e-94            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MTRHSAVRQAIIAALKKTDDGSTTFFDGRPVVVEEDELPAVAVYLSDAQYTGPEVDGDIWSAVLHVEVFLKATAPDSALDEQMENRVYPALGSVAGLGDIIRTMSAQGYNYQRDDEMAMWGSADLSYDITYSM
1080920..1081726                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage major tail protein; Lambda gpV homolog; STM474_1029; phage(gi169257307)     4.02e-179           SalmonellaentericasubspentericaserovarTyphimuriumstrST474MGVSRSELRHHLFHVEEKRMTDTTIPNPLAPVKGANTTFWMYNSEGDPFASPLSDNNWLRLANVKDLQPGELTADAEDNNYLDDENADWKSTTQGQKSAGDTSVTLAWKPGEDVQKKLIQLFTTGQKRGFRIKYPNGTVDVLRGWVSSLGKTVQSKDEIARTVKITSVGRPYMAEEDAPEVVSVTGLTVEPTNATVKVGATTAVTFTVKPDNVTDKSLRIATSDPTTATVTQAENIATVKGVKAGTVKIIGMTTDGNFTAIADITVQA
1081772..1082170                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail assembly chaperone; Lambda gpG homolog; STM474_1030; phage(gi169257308)     9.72e-92            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MFLKKETFTRGDASVALFELSGLQRIEYLEFIQKRTAKYDTDMDGTTEADKRVAYMQMALEINAWLVSRSLLNGDSSQDADTLYQSVQAKWSYEALDAGAESVLMLSGLSADKKDNASDSGNESEDMTPEKS
1082140..1082496                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail assembly chapterone - part of G+G' frameshift hybrid protein; Lambda gpT homolog; STM474_1031; phage(gi169257309)     1.77e-81            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MRGHDAGKVLNNELHFVRQLAREFRRPDWRRMLDEMSSTELSEWADFFRENSFSDALLDAEFSTLKAQVFMLVTGKEIDAADFSLLTLPGAVQSMTEQDLLEVAVGIPGGVRFEPESR
1082477..1085563                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tape measure protein; minor tail protein; Lambda gpH homolog; STM474_1032; phage(gi169257310)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MSQKVGDIVINMDVDTAKVAAGLQTASNGLGKLVDSSDLVEKRIKRCMESSARSVAASAKSISAAMAQSQVATRTQSDAMAQLAREANEARERAVDLNQKLRAEAAQAAVVAQAQDAAAAAFYRQIDSVKQLSGGLQELQRIQAQVRQAKGRGDISQGDYLALVSEAAAKTRELTDAEALATQKKAQFIRRLKEQTAVQGLSRTELLRVKAAELGVSSAADVYIRKLDTATKSTHALGLKSAMARREIGVLIGELARGNFGALRGSGITLANRAGWIEQLMSPKGMMLGGLVGGVAAAVYGLGKAYYEGAKESEEFNKQLILTGSYAGKTTGKLNEMAKSLAGNGVTQHDAAGVLTQVVGSGAFTGQAVAMVSRTAARMQENVGQSVDETIRQFKRLQDDPVNAAKELDRALHFLTATQLEQIRVLGEQGRTADAAKIAMSAYSEEMNKRAGDVHDNLGWIEKAWNAVGDAAKWAWDRMLDIGREDTLDEKIATLQEKIARARKTPWTVSSSQTEYDQQQLNELQEQKRQKDLLDAKAQAERNYQKTQKRRNEQNAALNRDNETESLRHQREVARITAMQYADAAVRNAALERENERHKKAMARQKEKPKAYYNDEAGRLLLQYSQQQAQTEGLIAAAKLSTTEKMTEAHKQLLSFQQRIADLSGKKLTADEQSVLAHKDEIALALQKLDISQQDLQHQNAFNELKKKTLTLTSQLADEESRVRQQHALALATMGMGDQQRGRYEEHLKIQQHYQEQLEQLKRDSKAKGTYGSDEYRQAEQELQASLDRRLAEWADYNAKVDAAQGDWTQGASRALDNFLAQGGNVAGMTENVFTNAFNGMADSIANFAVTGKGSFRSLTVSILADLAKMEARIAASKLLGSVLGMFVFGASAGGSTPSGAYSSAALSVIPNADGGVYRSAGLSQYSGSIVNRPTFFAFARGAAVMGEAGPEAILPLRRGTDGKLGVVAAGSGGMAMFAPQYHIAISNTGPELTPQALKAVYDLGKKAAADFVQQQGRDGGRLSGAYR
1085560..1085892                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tip assembly protein; Lambda gpM homolog; STM474_1033; phage(gi169257311)     1.49e-78            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MMKTFHWKVDPDMGVDSEPQVSVVRFGDGYEQRRASGINNDLKKYSVTIRVDREDGPGLEGFLSQHNGVKAFLWTPPYGYRQIKVVCRKWSVKAGLLKTTFTATFEQVIS
1085991..1086488                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage virulence determinant; Lom homolog; STM474_1034; phage(gi169257312)     2.52e-113           SalmonellaentericasubspentericaserovarTyphimuriumstrST474MKKIVVAVLVGLALGSIGVANAAGYKNTVSIGYAYTDLSGWLSGNANGANIKYNWEDLDSGFGAMGSVTYTSADVNNYGYKVGDADYTSLLVGPSYRFNDYLNAYVMIGAANGHIKDNWGNSDNKTAFAYGAGIQLNPVENIAVNASYEHTSFSTDADSDVKAGT
complement(1086605..1087138)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage virulence determinant; superoxide dismutase precursor; STM474_1035; phage(gi169257313)     5.18e-125           SalmonellaentericasubspentericaserovarTyphimuriumstrST474MKYTILSLVAGALISCSAMAENTLTVKMNDALSSGTGENIGEITVSETPYGLLFTPHLNGLTPGIHGFHVHTNPSCMPGMKDGKEVPALMAGGHLDPEKTGKHLGPYNDKGHLGDLPGLVVNADGTATYPLLAPRLKSLSELKGHSLMIHKGGDNYSDKPAPLGGGGARFACGVIEK
1087228..1087923                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tip assembly protein; Lambda gpL homolog; STM474_1036; phage(gi169257314)     6.83e-174           SalmonellaentericasubspentericaserovarTyphimuriumstrST474MQDIPQETLSETTKAEQSAKVDLWEFDLTAIGGERFFFCNEPNEKGEPLTWQGRQYEPYPIQVQDFEMNGKGASPRPNLVVANLFGLVTGMAEDLQSLVGASVVRHQVYSKFLDAVNFSNGNPDADPEQEAVARYNVEQLSELDSSTATIILASPAETDGSVVPGRTMLADSCPWDYRDENCGYDGPPVADEFDKPTSDPKKDKCSHCMKGCEMRNNLVNAGFFASINKLS
1087933..1088670                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tip assembly protein; Lambda gpK homolog; STM474_1037; phage(gi169257315)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MINDDILAHARQCAPAESCGYVVRTAQGERYFPCENLSAEPTMYFRISPEDYLNARNRGDIVALVHSHPDGKPCLSSADRTLQIQSGLDWWLVCDNRIHKFRCVPHLTGRQFEHGVTDCYTLFRDAYHLAGIDMPDFDREDDWWSQGKSLYLDHLEAAGFYRVNPEDAQPGDVLICCFGSPTPNHAAIYCGNGELLHHIPEQLSKREGYNDKWQRRTHSIWRHRQWCESAFTGIYNDLESASASA
1088568..1089272                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tip assembly protein; Lambda gpI homolog; STM474_1038; phage(gi169257316)     1.99e-170           SalmonellaentericasubspentericaserovarTyphimuriumstrST474MATTDTLNMAAPAMVRICLYGDLQRFGKRISLSIKTAAEGIHALAIQLPGFRQRMNEGWYQVRIAGSDMAPDTLTARLNESLPPGAVVHIVPRMAGAKNGIWQVVAGAALIGASFIPGLNAVAAAVLFSAGTSMALGGVAQMLTPVPKTPTVGQADNGKQNTYFSSLENMVAQGNPVPVLYGEMKIGSRVISQMMSTRDESTSGKVVVIGSPLQANTTSRQDGGITRPSVVIRQ
1089344..1092694                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail fiber (host specificity) protein; Lambda gp J homolog; STM474_1039; phage(gi169257317)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MSKGGGKGHTPREAKDDLKSTQQLSVIDALSEGPIVGPVNGLQSVLINNTPVVDADGNSNIHGVTVVYQVGETPQAPLEGFEASGAETVLGVEVKHDNPVTRTVVSENVDRLRFTFGVQMLQETTDKGDRNPSSVNLLIQFQRSGIWNTEFDITINGKITTQYLASVVADNLPPRPFSVRMVRVTPDSTTDRLQNKTLWSSYTEIIDIRQGYPGTAVAGLLVDAEQFGSQQVTRNYHLRGRIFQVPSNYDPDTRTYTGLWDGAFKPAYTNNPAWCTMDKLTHPRYGLGRRIGGADVDKWALYAIAQYCDQPVPDGFGGTEPRMTLNAYITTQRKAYDVLADFCSVMRCMPVWNGRKMTFIQDRPSDKAWTYTNGNVVGGRFKYSFSALKDRHNAVEVRYTDPLNGWQTSTELVEDHASQARYGRNLLKMDAFGCTSRGQAHRTGLWVMMTELLETQTVDFSVGAEGLRHTPGDIIEVCDNDYAGASVGGRITDLDISTRTLTLDREITLPESGATTLNIVGPDGKPFSTEIQSQPAPDRVVTKVLPETVQPYSIWGLKLPSLKRRLFRCVRIKENDDGTYAITALQHVPEKESIVDNGAHFDPLPGTTNSIIPPAVQHLTVSTDNDSTLYQAKAKWGTPRVVKDVRFVVRLTTGSGNEGDPVRLVTTATTSETEYAFHELPLGDYTLTVRAINGYGQQGEPASVAFSIQAPEAPSTIEMTPGYFQITVTPHQTVYDASVQYEFWYSATQLATAADIQSKAQYLGVGSFWIKDGLKPLHDAWFYVRSVNLAGKSVFAEASGRPGDDAKGYLDFFKGLITETYLGTELLKKIDLTENNASKLQQFSKEWQDANDKWSATWGVKIEQTKDGKYYVAGLGLSMEDTPDGKISQFLVAADRIAYINPANGNETPGFVMQGDQIIMNEAFLKYLSAPTITSGGNPPAFSLTPDGKLTAKNADISGHINAVSGSFTGEINATSGKFSGVIEAREFVGDICGSKVMQGVSIRATNDERSTSTRYTDSATYQIGKTITVMANCERNGGTGAITVTININGQVKTAEVMPYTAGIPAMYQTVVFSVYTTSPVVDISVSLRVRGQYTTSASVWPLVMVSRSGSNFTN
1092733..1092975                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; STM474_1040; phage(gi169257319)     6.58e-54            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MTMSRVISLAAGLSLSVLFSTAAVADNGRGSGNSNIENQTRIYTGTDRGQKQHREAKGKTITRSVQCSLPAYLRDPDNQC
1093029..1095236                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber protein; Lambda gpStf (gpN) homolog; STM474_1041; phage(gi169257320)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MPVLISGVLKDGTGTPVQNCTIQLKACRTSTTVVVNTVASENPDDAGRYSMDVEQGQYTVTLLVDGYPPSHAGVITVYDDSKPGTLNDFLGAMTEDDVRPEALRRFEAMVEEVARQASEASRNATAAGQASEQAQTSAGQASESATAAVNAAGAAEASATQAASSAASAESSAGTATTKAGEASASAASADTARTAAAASAAAAKTSETNAATSASTAAASATAASSSASEASTHAAASDTSASLAAQSSTAAGAAATRAEDAAKRAEDIADVISLEDASLTKKGIVKLSSATDSDSEALAATPKAVHAVMDEVQTKAPLDSPALTGTPTAPTPETAAAGIEIATAAFVAAKVAQLVGSAPETLDTLKELADALGNDPNFATTVLNKLAGKQPLDDTLTALSGKSVDGLIEYVGLRETINHAADALLKSQNGGDIPEKPLFVQNIGALPASGTAVAANRLASRGALPALTGATRGSDSGLIMGEVYNNGYPTQYGNILRLTGTGDGEILIGWSGTNGAPAPAYIRSHRDTADAEWSEWAMLYTSLNPPPNSYPVGAAIAWPSDATPAGYALMQGQSFDKSAYPLLAIAYPSGIIPDMRGWTIKGKPISGRAVLSQEMDGNKSHSHSARAQDTDLGTKSTSSFDYGTKSTNTTGNHTHQFGGYINSYWGDSNHTSFQPGGGAWTQAAGDHAHTVYIGGHEHTMYIGPHGHVVIVDADGNAETTVKNIAFNYIVRLA
1095236..1095817                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber assembly protein; Lambda gpTfa analog; STM474_1042; phage(gi169257321)     7.23e-143           SalmonellaentericasubspentericaserovarTyphimuriumstrST474MTFKMSEQAQTIKIFNLRSDTNEFIGAGDAYIPPHTGLPANCTDIAPPDIPASHIAIFDAETQTWSLHEDHRGEMVYDTTTGNQVYISAPGPLPENVTSVSPGGEYQKWDGKAKVWVKDEAAEKAAQLRQAEETKSRLLQMASEKIAPLQDAVDLGIATDDEKARLDEWKKYRVLVNRMDTAAPDWPERPASQ
1096293..1097261                   PHAGE_Phage_Gifsy_2_NC_010393: prophage virulence determinant; secreted effector protein; STM474_1043; phage(gi169257322)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MPFHIGSGCLPAIISNRRIYRIAWSDTPPEMSSWEKMKEFFCSTHQAEALECIWTICHPPAGTTREDVVSRFELLRTLAYDGWEENIHSGLHGENYFCILDEDSQEILSVTLDDVGNYTVNCQGYSETHHLTMATEPGVERTDITYNLTSDIDAAAYLEELKQNPIINNKIMNPVGQCESLMTPVSNFMNEKGFDNIRYRGIFIWDKPTEEIPTNHFAVVGNKEGKDYVFDVSAHQFENRGMSNLNGPLILSADEWVCKYRMATRRKLIYYTDFSNSSIAANAYDALPRELESESMAGKVFVTSPRWFNTFKKQKYSLIGKM
complement(1097909..1098535)       PHAGE_Pseudo_F116_NC_006552: hypothetical protein; STM474_1044; phage(gi56692976)     3.20e-36            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MCGRFAQAQTREEYLAYLADEADRNIAYDPQPIGRYNVAPGTKVLLLSERDEQLHLDPVIWGYAPGWWDKAPLINARVATAASSRMFKPLWQHGRAICFADRWFEWKKEGDKKQPYFIHRKDGKPIFMAAIGSTPFERGDEAEGFLIVTSAADKGLVDIHDRRPLALTPETARVWMRQFLEPHSKSITYRVIPALTRPMMRKDTNPCQ
1098511..1098666                   hypothetical protein; STM474_1045                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MLVQSVHTYETASRQAESIGQGENVARSGNDLQGIYTVIRNENLCIDEFRN
complement(1098604..1098903)       Gifsy-2 prophage protein; STM474_1046                                                N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MYHFMIVNLYQDNYSGYRQHGGAEVQILSCRPKFPLKTSLSGLFFLWLNFLRGSYGVKLGNKAVEIRRNLRLIHQFAHCSVSEFINTQIFISNYCINSL
complement(1098888..1099574)       Gifsy-2 prophage protein; STM474_1047                                                N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MLRHIQNSLGSVYRSNTATPQGQIIHHRNFQSQFDTTGNTLYNNCWVCSLNVIKSRDGNNYSALEDITSDNQAFNNILEGIDIIECENLLKEMNVQKIPESSLFTNIKEALQAEVFNSTVEDDFESFISYELQNHGPLMLIRPSLGSECLHAECIVGYDSEVKKVLIYDSMNTSPEWQSNIDVYDKLTLAFNDKYKNEDCSICGLYYDGVYEPKPLHSSSWKDWCTIL
complement(1099845..1100036)       PHAGE_Entero_mEp390_NC_019721: DinI-like family protein; STM474_1048; phage(gi428782688)     5.05e-34            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MFVELVYDKRNVEGLEGASEIILAELTKQVHQIFPDAEVRVKPMQANCLNSDTNKSDRENLNR

#### region 2 ####
1915442..1915771                   PHAGE_Entero_HK022_NC_002166: integrase; STM474_1887; phage(gi9634144)               9.81e-20            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MGLRLSTVIERCRLVSRSEYLISAGIRKNSPNGSIHPNSLTKKFVAARKLTGINFSENPPPFHEIRSLSGRLYKDAYGEGFAQKLLGHTSENTTKLYLDERDNKAYVML
1915906..1915928                   attL                                                                                 N/A                 AAAAAGAGACCGAATACGATTCC
1917075..1917989                   integral membrane protein; STM474_1888                                               N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MRKVSISILFMLVSLTWGTTWLAMRIAVETIPPVFATGMRFMFAAPFLIIIAWLRKKTLLFPPGQRLFQFVICIFYFCIPFSLMIYGETYVNSGLAAIIFANMPVAVLIASVLFLNEKAKLMQIAGLTIAITALTGILLEETNTSTESHWQGITALISAVLIHAIIYTQCKKRSCTVSVITFNALPCLLAGLILSATGWFFERPQVSTFSVHSILATLYLGAFAGVFGILCYFALQQKANAFQASLVFLIFPLIAVSLEDYIYGYAISTHSMLLIIPLVIGIFLTLVARNLPVTSRCRDNSSQK
1918122..1918280                   putative inner membrane protein; STM474_1889                                         N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MFMFLPFLLALSVAMGAINRKDKVSYILWAVLLIVTILSFIHHMTNSLTLSF
1918290..1918904                   putative inner membrane protein; STM474_1890                                         N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MKTHHHPTTFVHLINQVGLLGICVALVVAFYYQLVRHELPCPICLLQRAGLIIAGFGFLFNLCFGLRGIHYGMVIIGSILTGVMASRQICLHIMPGDTGYGSAFFGLHFYTWTLITSILIIIAVAVILAISSMNVAFRSLNINPDLFSIVGWVFLLLITANLISTVLECGGGECAANPVTYKLLSKQDIAFLKTGLLTRTVLRL
1919392..1919538                   hypothetical protein; STM474_1891                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MAHWVLKQWPQLALDAISQITFQMDNKHSSYPVCIGIVKPDVDHLHQG
complement(1919657..1919839)       PagM; STM474_1892                                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MFSLIKSRKVLFITTLLLLSSAAQPAFALGCIGDGGSTADCAKVCSLAAGLGPLGFLICF
complement(1920052..1920177)       arsenical pump membrane protein; STM474_1893                                         N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MFANADSELILTPIIIAVLLAPGFSKSTTLAILHFFFRREK
1920747..1920947                   PHAGE_Phage_Gifsy_1_NC_010392: PagK-like protein; STM474_1894; phage(gi169257211)     3.39e-42            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MKHVKSVFLAMVLILPSSLYPALTIAADSQDHKKEETIKPMPQKWCNLWPAGIPFPEDWFKMCRGY
complement(1921044..1921925)       PHAGE_Salmon_Fels_1_NC_010391: putative bacteriophage tail assembly protein; STM474_1895; phage(gi169257205)     8.93e-90            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MYIGPHGHVVIVDADGNAETFGLMDGGVDAAITAYFGSQLQERVQQNIIREYLGEQPVGTAFVIETGNSKHPWLVPAPTMRVPLIIDGTDAVYNATRAALLAIFQHNKSAGEDRKITSVALPAMGAGCGQVPPGQRRPANCTDIAPPDIPSSHIAVFDAETQTWSLQEDHRGETVYDTTTGNQVYISDLGPLPENVTSVSPGGGYKKWDSKAQVWMNDEAAEAAARLREAEGTKNRLLQIASEKIAPLQDAVDLDEATNKEKASLLAWRKYRVQVNRVDTLKPVWPEKPASSL
complement(1922080..1922343)       PHAGE_Salmon_Fels_1_NC_010391: bacteriophage terminase, small subunit; STM474_1896; phage(gi169257184)     8.76e-57            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MDGELKNLKCNISQLAAITGLHRQTVVSRLSGVPLALGSNEKNKLYLLTDVIRVLMETPVSQAAEHQDPNKMTPKERKNWFDSEKGR
1922464..1922586                   hypothetical protein; STM474_1897                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MMMMHEKSKMRQIPRRCRPVAGRPAGSTFLKCEQLSTTTT
1922651..1922818                   lytic enzyme; STM474_1898                                                            N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MKNIITIIVAIIIVFYAGMWSQKFLMEDECLDSGGSYNENGICNIAGSHQDVPPK
1922971..1923090                   hypothetical protein; STM474_1899                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MSTYQFHLVKNLFLFIWFHLMICSHFFTAILQGEFQCLL
complement(1923075..1923608)       PROPHAGE_Salmon_LT2: phage-tail assembly-like protein; STM474_1900; phage(gi16765210)     1.20e-124           SalmonellaentericasubspentericaserovarTyphimuriumstrST474MNLLSALLKRYWLQLVFILLMAGAFIAGNVWSDRGWQKKWADRDSAESSQEVNAQTAARIIEQGRVIARDEAVKDAQAQAAKSAATAAGLSATVSQLRTEAKKLATRLDAAKHTANLAAAVRSKTTNADARMLANMLGDIAEAAKHYAGIADERYRAGMTCERVYDSVRESNNYRRH
complement(1923662..1923949)       PHAGE_Salmon_Fels_1_NC_010391: putative bacteriophage endolysin; STM474_1901; phage(gi169257182)     1.67e-37            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MGCWGVIRHIFVPVRIANAMNGKKAFAPRSAKIRITGLENYTRCGVALKLDLVANPGQLELERHAARSAAWLFVTKGCLKYSGDLVRVTQIINGG
1923923..1924576                   PHAGE_Shigel_Stx_NC_029120: exodeoxyribonuclease VIII; STM474_1902; phage(gi985761253)     5.65e-27            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MPDNTPTTHEENAARLSQAGKCLRDIEAGRFQCDEEKQQPTGELADEPATPEAVEQDTTEHHPDPQPLENEPPVSQTEAGYQKIRAELHEARKNIPPKNPVDVGKQLAAARGEYVEDISDPNDPRWVHNNYSASNQGEKEEVVPEGKQPAAEPEAVTRNADGTFDVSALFLPPSNQTEKTEARTERDGETPKESNQQETAGDTGQEITTDGGSGTTS
1924594..1925490                   PHAGE_Entero_HK022_NC_002166: integrase; STM474_1903; phage(gi9634144)               5.02e-84            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MALIEKLKGTDSFTVSAWIDRYEVLLQRRNLSVNTYKIRSNQLATVREKMGEIILAEVTTRHIAKFLESWITEGKNTMAGAMRSVLSDMFREAIVEGHIVKNPVEATRIPEIKVARERLQLETYNATRAAAEHMPAWFPLAMDLALVTGQRREDIVNMKFSDVFDNRLYVTQIKTGMKIAIPLSLTLRATGLRLGTVIDRCRLVSRTDFMISAGIRKNSPTGNIHPDGLTKTFVKARKASGVNFSNNPPTFHEIRSLAGRLYKNEHGEVFAQKLLGHTSENTTKLYLDERDNKAYVML
1925621..1925643                   attR                                                                                 N/A                 AAAAAGAGACCGAATACGATTCC
complement(1925687..1925806)       putative cytoplasmic protein; STM474_1904                                            N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MITDKTPGFFNHLRRKLENLASSSILKGQGDLACINANF
complement(1925864..1926217)       PHAGE_Salmon_SEN1_NC_029003: hypothetical protein; STM474_1905; phage(gi971764937)     8.26e-12            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MKKILLPALLLATSGVALAAPQVITVSRFEVGKDKWAFNREEVMLTCRPGQALYVINPSTLVQYPLNAIAEQQVAEGKTRAQPIAVIQIDNPAKPGEKMSLAPFIERAQKLCDPSNS
complement(1926234..1927109)       putative inner membrane protein; STM474_1906                                         N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MMLTFVWITLRFIHFASVMLVYGCALYGAWLAPASIRRLMTRRFLHLQQHAAAWSVISAAFMLAVQGGLMGGGWPDVFFVSVWGAVLQTRFGAVWIWQIILALVTLAVVVIAPVKMQRRLLILTVAQFILLAGVGHATMRDGVAGTLQQINHALHLLCAAAWFGGLLPVVYCMRMAQGRWRQHAISAMMRFSRYGHFFVAGVLLTGIGNTLFITGFTAIWQTTYGQLLLLKCALVVLMVAIALTNRYVLVPRMRQENPRTDLWFVRMTQIEWGVGGIVLAIVSLFATLEPF
complement(1927110..1927490)       hypothetical protein; STM474_1907                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MNMASSAPSRRLALLLLASTFATPAAWAHAHLTHQYPAANAAVTASPQALTLNFSEGIEPGFSGATITGPQQELIKTRPAKRNEQDKTQLIIPLEQPLKSGAYTVDWHVVSVDGHKTKGKYTFSVK
1927622..1927852                   PHAGE_Pectob_ZF40_NC_019522: putative DNA polymerase; STM474_1908; phage(gi422936677)     7.33e-23            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MKTNLAQLEQAEMDKVNVDLAAAGVAFKERYNMPVVAEAVEREQPEHLRAWFRERLIAHRLASVSLSRLPYEPKVK
1927960..1928616                   putative amidohydrolase; STM474_1909                                                 N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MSSWKIAAAQYAPLNASPAEHVAHHLEYIELAARQQCELLVFPSLSLLGCDERNKSLPAPPDEALLQPLTHAADTHHMTIIVGMPVEHNCRFVKGIAIFAPWLTSPLMFHKSHGACIARQRSAINVVDEQPEGGDIDPSFTLFTTSQCLNEPELHASTSRLQRFSHKYALAVLMANACGSSALWNESGQLIVRADCGSLLLTGLRTTEGWQGDIIPLR
1928640..1929338                   PHAGE_Pseudo_H101_NC_029094: exodeoxyribonuclease X; STM474_1910; phage(gi985760125)     7.36e-19            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MLRIIDTETCGLQGGIVEIASVDVIDGNIVNPMSHLIRPDRPITPQAMAIHRITEAMVADKPWIEDVIPLYYGSEWYVAHNASFDRRVLPELPGEWICTMKLSRRLWPGIKYSNMALYKSRKLSVQTPPGLHHHRALYDCYITAALLIDIMRTTGWTAEEMVNITGRPALLTTFPFGKYRGKAVSEVAKRDPGYLRWLFNNLDNMSPELRLTLKHYLEDVQAGEQRSNGTPQ

#### region 3 ####
complement(2037460..2038728)       PHAGE_Salmon_vB_SosS_Oslo_NC_018279: error-prone lesion bypass DNA polymerase V; STM474_2029; phage(gi399528790)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MFALCDVNSFYASCETVFRPDLCGRPVVVLSNNDGCVIACSAEAKQLGIAPGEPYFKQKERFRRSGVVCFSSNYELYADMSNRVMTTLEEMVPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLKRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTDGVVDLSNIDRQRRLLALIPVEDVWGVGRRISKKLNALGIKTALDLSEQSTWIIRKHFNVVLERTVRELRGEPCLELEEFAPAKQEIVCSRSFGERVTDYEEMRQAVYSYAARAAEKLRGEHQYCRFISTFVKTSPFALNEPYYGNSAAVTLLTPTQDSRDIINAAVKCLDKIWRDGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRAGSAKLMEVLDHLNAKDGKGTLYFAGQGMSQQWAMKREMLSPRYTTRYSDLLRVK
complement(2038731..2039150)       PHAGE_Salmon_vB_SosS_Oslo_NC_018279: errror-prone repair protein UmuD; STM474_2030; phage(gi399528789)     2.11e-40            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MEFFRPTELREIIPLPFFSYLVPCGFPSPAADYIEQRIDLNELLVSHPSSTYFVKASGDSMIEAGISDGDLLVVDSSRNADHGDIVIAAIEGEFTVKRLQLRPTVQLIPMNGAYRPIPVGSEDTLDIFGVVTFIIKAVS
complement(2039277..2039438)       putative cytoplasmic protein; STM474_2031                                            N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MGAGQKINCCEGNALARGDNLRCGTVDAVQKIWPPGWLKYAHMTIQPENLQNP
2040485..2040496                   attL                                                                                 N/A                 TAGCGTAAGGGT
2040503..2041510                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; STM474_2032; phage(gi23505470)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MFSRVRGFLSCQNYSHTATPAITLPSSGSANFAGVEYPLLPLDQHTPLLFQWFERNPSRFGENQIPIINTQQNPYLNNIINAAIIEKERTIGVLVDGNFSAGQKKALAKLEKQYENIKVIYNSDLDYSMYDKKLSDIYLENIAKIEAQPANVRDEYLLGEIKKSLNEVLKNNPEESLVSSHDKRLGHVRFDFYRNLFLLKGSNAFLEAGKHGCHHLQPGGGCIYLDADMLLTGKLGTLYLPDGIAVHVSRKGNSMSLENGIIAVNRSEHPALKKGLEIMHSKPYGDPYIDGVCGGLRHYFNCSIRHNYEEFCNFIEFKHEHIFMDTSSLTISSWR
complement(2041795..2042121)       PHAGE_Salmon_ST64B_NC_004313: Probable tail fiber assembly protein; STM474_2033; phage(gi23505469)     8.15e-73            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MLWPVNMSVAEIDAADCPDDCRGDGTWLYQDGKVVQRGYSPEELRKKAEAEKVRRLAEAESAIAPLARAVKLKIATDEEIKRLEAWELYSVMVNRVDTSAPDWPDIPR
complement(2042364..2043926)       PHAGE_Salmon_ST64B_NC_004313: tail protein; STM474_2034; phage(gi23505468)           0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MHRIDTPTAQKDKFGQGKNGFTNGDPATGRRATDLNSDMWDAVQEEVCTVIEAAGIPLSKGEHTQLHAAIGRLIDEQVKTRLEKNQNGADIPNKPLFLQNVGLGETINLAAGALQKSQNGGDIPDKKQFARTIGAVTSTTITLGESGWFKIATVVMPQATSTAVIKLYGGAGFNAGSPEQAAISELVLRAGNGSPVGITATLWRRSPSAANEVAWVNTSGDTYDIYINIGQYAYWLIAQYDYTGNANVTLHSTPEYSSVQPGNSTSGQTYTLFNSLMKPTAGDVEALSVNGGRLNGPLGIGTDNALGGNSIVFGDNDTGFKWHSDGVLGIYANNALVGYIDNSGLHMSVDVLTNGAVRAGNAKKLSLTSNNNSTMTATFNLWGDANRPTVIELDDDQGWHLYSQRNPDGSIVFTVNGDITANTLRAGGAIYQNNGDIFGSLWGDGWLSTWINNNLVLDVQLGAGTSVTTWNNAGSWPNTPGYVVTSVWKDYQGENIDGINYAPLQKRVGSQWYTVQGGTV
complement(2043913..2044500)       PHAGE_Salmon_ST64B_NC_004313: putative tail protein; STM474_2035; phage(gi23505467)     6.61e-145           SalmonellaentericasubspentericaserovarTyphimuriumstrST474MALQDEYTQLLYHLLPEGPAWDGENPLIEGLAPSLNRVHQRADELMAEIDPARTTELIDRYEQLYGLPDSCAPEGVQTLQQRQQRLDAKANVAGGINERFYREQLDALGYTAATIEQFQNLDSTPDPEWGEFWRYYWRVNIPADANISWQTCTSTCDSAIRTWGDTVAECVIDKLCPSHTVVVFAYPEGKENAQN
2045447..2045458                   attL                                                                                 N/A                 GCAGCCTGTACC
complement(2045576..2045989)       PHAGE_Salmon_ST64B_NC_004313: putative tail protein; STM474_2038; phage(gi23505464)     3.33e-96            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MILYVNGIRKDATASLDFLTRAVVISLFTWRRAERDDRTPQPYGWWGDTWPAVQNDRIGSRLYLLKRRKLTNKTPQDAREYMQQALAWMTDDGVAARIDVTSERTGTDTLAAGVTIYQRDGVIHNITFDDIWSKLNG
complement(2045994..2046527)       PHAGE_Salmon_ST64B_NC_004313: putative base plate assembly protein; STM474_2039; phage(gi23505463)     2.05e-129           SalmonellaentericasubspentericaserovarTyphimuriumstrST474MANHPLQNMITRAVITAIDTVRKCQTAGLKLIAGEKKENVEHLEPYGFTSAAQNGAEAVVLFPGGDRSHGVAVVVADRRFRLKGLARGEVALYDDQGQSVTLTRAGIVVNGGGKPVIFTNATKARFEMPIESTGDIRDNCDSSGKTMAEMRTTYNGHTHKENGDGGGITDKPGQPMS
complement(2046527..2047585)       PHAGE_Salmon_ST64B_NC_004313: Tail protein; STM474_2040; phage(gi23505462)           0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MNNTVFLRVNGRDWGGWTSVRISAGIDRIARDFNVSITRQWPGGEDVPPVKNGDSVEVLIGDDLVITGWVEALPLRYDAQTIMTGIVGRSKTADLIDCSASPAQHNGENLFLIASALARPFGVDVVDAGAPAAAVIEAQPEHGETVVDCLNRLLGQAQALAYDDERGRLVLGRPGSMKAATALVLGENILSCDTERSVRERFSSYLVTGQRPGTDDDFGEATIAAIRQSTGDAGVTRYRPHTIQQSGTATTDSCKSRCEFEARQRAAKTLETTYTVQGWRQGNGELWKPNQAVVVYDPLNGFDNETLVIAEVTYSQDNNGTLTEIRVGPADAYLPEPFRPKAKKKVSEEADF
complement(2047582..2048922)       PHAGE_Salmon_ST64B_NC_004313: tail/DNA circulation protein; STM474_2041; phage(gi23505461)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MAFFSSTGWRGRLRDASFRGVPFSVEDDESTFGRRVQVHEYPNRDKPWTEDLGRATRRLTINAYLVGDDYADRRDRLIGAIETAGPGTLVHPQYGEMQGSIDGQVRITHSSTEGRMCRVSFQFVESGELSFPVAGMATAKRLETSGGLFDDAIDSMFSTFSLSGISDFIQNDVIADAASMLGDVADAFRMVDSGVSAAMRLLQGDLSVILMPPGAASDFVNALQKAWRSGDRLRGSTSDLVTMIKTMSGITLDPGLSPRGTWPTDSGSAAKQKMQRNMIAAAIRTTAISTAVHAVTTLKQPRDVPGVRGVNQPAGTGRDSDIITVMHPALDGVQTVSNGSSPPNYEDLKAIRTALNAAIDQEQLRIRDDVLFQQISVMRTDLNRDISARLAQVERTALRTPDDVLPALVLAAAWYDDAGRESDILTRNPVPHPGFIPVEPLRVPVR
complement(2048956..2050884)       PHAGE_Salmon_ST64B_NC_004313: tail protein; STM474_2042; phage(gi23505460)           0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MADSFQLKAIITAVDQLSGPLKGMQRELKGFQKEMAGLAIGAAAAGTAVLGALALPVNAAIGFESKMADIRKVVDGLDDKKAFAQMSDDILTLSTQLPMAAEGIAEIVAAGGQAGIARGDLMQFANDAVKMGVAFDTTAEESGQMMAQWRTAFRLTQEDVVVLADKINYLGNTGPANAKKISDIVTRIGPLGGVAGVASGEIAAMGATIAGMGVESEIASTGIKNFMLSLTAGNSATKAQKQAMAFLKLNPRKLAEDMQKDSRGAMLKVLDSLAKVPKAKQAAVMNALFGKESLSAIAPLLTNLDLLRTNFDRVADAQEYGGSMQKEYASRAATTENQLVLLKNSVNAISVTLGDTFLPAINEAAEAVMPYLEQLRTFVRANPELVQSAAKFGAALLAVGVSIGSLSRAVKILNSVINLSPAKVAIAALVAGAMLIIENWDDVAPVIKAVWQEVDNVAQEMGGWETVIEGVGLVMAGSFTVRTIGALQQSVLLAGRLSGLLGKIGRMGAMTLTIGVAVSLFKELKDLEQGAKDAGMDAGAFAVQKLQTKERERGYNGFIPRLKELLGMDTPIPQGRYQPYVPLTRRSGVLERAVPPSTQRSELKVTFENAPQGMRVTDIPKSGNPLMNISHDVGYSPFRTSR
complement(2050969..2051295)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; STM474_2043; phage(gi23505501)     1.76e-73            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MIKELVLKKPIMAHNEKLHVLELREPSYDEIEAIGFPFTVSGDGGVRLDSSVALKYIPVLAGIPRSSAAQLAKLDIFKACMLILNFFTRSETEEDSESGSTTPHTSGE
complement(2051292..2051570)       PHAGE_Salmon_ST64B_NC_004313: Tail tube protein; STM474_2044; phage(gi23505459)      1.41e-63            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MNTKVRDDVIGLDGSVDYKETSRAPYTKVTAKVPKNFPVDKITSSDVMTITSELANGQVYVLSNAWLHGEANHNPEEGTVDLEFHGEEGFYQ
complement(2051648..2053144)       PHAGE_Salmon_ST64B_NC_004313: Tail Sheath protein; STM474_2045; phage(gi23505458)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MAISFNSIPSDTRVPLFYAEMDNSAANTARDSGASLLIGHASNDASIAVNSLVLVSSVDYARQICGAGSQLARMVGAYRKTDPFGELYVIAVPESTGAAATVALTVTGEATETGTVNVYTGRTRVQAPVTSGDDAAAVAVSIKDAVNANPDLPFTATSEAGVVTLTARHKGLYGNEIPVTLNYYGFGGGEVLPAGVNITVASGVKGAGAPALNDAVAAMGDEPFDYIGLPFNDTASVNSMATEMNDSSGRWSYVRQLYGHVYTAKTGTLSELVAAGDQFNLQHITLAGYEKDTQTPADELAASRTARAAVFIRNDPARPTQTGELVDMLPAPKGKRFTTTEQQTLLSHGVATAYVESGVLRIQRDITTYRKNAYGVADNSYLDSETLHTSAYVLRRLKSVITSKYGRHKLANDGTRFGSGQAIVTPAVIRGELGSTYRQMEREGIVENFDLFQQHLIVERNANDSNRLDVLFPPDYVNQLRVFAVLNQFRLQYSEEAA
complement(2053302..2053802)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; STM474_2046; phage(gi23505456)     5.06e-119           SalmonellaentericasubspentericaserovarTyphimuriumstrST474MGGAAQFKAIPEAGKLRLPAAYVVPAEDVTGEQKSQTDYWQDLTEGFSVIVVLSNERDEKGQWASYDAVHDVRQEIWKALLGWEPDSQVHEIQYAGGMLLDLNRHELYYQFDFTVKYEITETDTRQQDDLDGLPDLKTLSIDVDFIEPGTGPDGDIEHHTEITFQE
complement(2053859..2054371)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; STM474_2047; phage(gi23505455)     4.05e-121           SalmonellaentericasubspentericaserovarTyphimuriumstrST474MPQKAYLHVDFVQPEELVFNRARMRRAFVKIGQVHMRDARRLVMKRGRSKPGENPSYRTGQLARSIGYYVPRASKKRPGLMVKIAPNQKNGEGNRHINGAFYPAFLFYGVRRGAKRKKGHHRGASGGSGWRVEPRNNYMTEVLDKRRSWTRYVLSRELRKSLRPQRRKKK
complement(2054343..2054747)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; STM474_2048; phage(gi23505454)     7.96e-96            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MKIRQAQTSATYLLPDPGELDQRIVIRRRVDVPADDFGVTPTYPEQIRTWAKKAQPGAAAYQGSVQIENRVTHYFTIRFRRGITADHEVLHDDISYRVKRVRDLNGKRRFLLIECEALGTDNGSDYAAESIFTR
complement(2054744..2055067)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; STM474_2049; phage(gi23505453)     2.52e-73            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MLLSVEEIKAQLRLDEDFEADERYLQLLARAVQKRTETYLNRKLYAPDETIPDSDPDGLLLQDDIRLGMLMLISHFYENRSSVTEVEKLDMPQSFGWLVGPYRYFPQ
complement(2055070..2055270)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; STM474_2050; phage(gi23505452)     8.57e-42            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MILKQDLKWSPDGLRVEIIRAGEHDDRILPARVQEIALQTGLAECETSAKSNKAVKEKKSTTSQEG
complement(2055321..2056526)       PHAGE_Salmon_ST64B_NC_004313: Major capsid protein precursor; STM474_2051; phage(gi23505451)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MAVDIKDVEQVAQELQQKFDDFKAKNDKRVEAIEQEKGKLAGQVETLNGKLSELENLKSDLEKELLELKRPARGAQNKVAAEHKDAFVGFLRKGREDGLRDLERKALQVGTDEDGGYAVPEELDRSILSLLKDEVVMRQEATVITVGGSDYKKLVNLGGTASGWVGETDTRSQTATSRLGLIEPFMGEIYGNPQATQKMLDDAFFNVEAWINSELATEFAEQEEIAFTTGDGTKKPKGFLAYESTEESDKARAFGKLQHIVSGEATAVTADAIIKLIYTLRKAHRTGAKFMMNNNSLFAIRLLKDTEGNYLWRPGLELGQPSSLAGYGIAENEQMPDIAADAKAIAFGNFKRGYTIVDRIGTRILRDPYTNKPFVGFYTTKRTGGMLVDSQAIKLLKIAAA
complement(2056541..2057227)       PHAGE_Salmon_ST64B_NC_004313: Pro-head protease; STM474_2052; phage(gi23505450)      8.09e-166           SalmonellaentericasubspentericaserovarTyphimuriumstrST474MAVKPVSRRITPMQTKQRLDVPLSLKSVSDSGEFEGYGSVFGVKDSHDDVVMSGAFAASLREWSDRKALPALLWQHRMDEPIGVYTEMKEDDVGLYVKGRLLIDDDPLAKRAHAHMKAGSLTGLSIGYVLKDWEYDRSKEAFLLKEIDLWEVSLVTFPSNDEARISDVKNALARGEIPEQKKIERVLRDVGLSRTQAKAFMAGGYGALSLRDAEDVGSALNVLKNLNF
complement(2057169..2058413)       PHAGE_Salmon_ST64B_NC_004313: Portal Protein; STM474_2053; phage(gi23505449)         0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MVFFSGLFQRKSDAPVTTPAELADAIGLSYDTYTGKQISSQRAMRLTAVFSCVRVLAESVGMLPCNLYHLNGSLKQRATGERLHKLISTHPNGYMTPQEFWELVVTCLCLRGNFYAYKVKAFGEVAELLPVDPGCVVPKLNSSWEPVYQVTFPDGSTDVLSQEDIWHVRTLTLDGLVGLNPIAYAREAISLAAATEEHGARLFSNGAVTSGVLRTEQTLSDQAYERLKKDFEERHTGLGNAHRPMILEMGLDWKSMALNAEDSQFLETRKFQLEEICRLFRVPLHMVQNTDRATFNNIEELGLGFINYSLVPYLTRIEQRINTGLVRKSKQGVFYAKFNAGALLRGDMKSRFEAYATGINWGIYSPNDCRDLEDMNPRPGGDVYLTPMNMTTKPSDGSKAGKQKDNANADETTS
complement(2058410..2058592)       PHAGE_Salmon_ST64B_NC_004313: putative integral membrane protein; STM474_2054; phage(gi23505448)     4.20e-35            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MIMLILAPLVGVLGALLLAYGAWLIYPPAGFVVAGALCMFWSWLVARYLDRTQQSVGGGK
complement(2058604..2060337)       PHAGE_Salmon_ST64B_NC_004313: Terminase large subunit; STM474_2055; phage(gi23505447)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MSRKSYPNVNAANQYARNVVRGKITACQYVIQACQRHIDDMAAEKSKRFRYRFDKDMAEKAAKFIQLLPHTKGEWAFKRMLITLEPWQLFIVCCAFGWVQKGTKLRRFREVYTEIPRKNGKSAISAGVALYCFTCDNEFGAEVYSGATTEKQAWEVFRPARLMCKRTPLLVEAFGIEVNASNLNRPEDGARFEPLIGNPGDGASPHCAIVDEYHEHPTDALYTTMLTGMGARRQPLMWAITTAGYNIEGPCYDKRREVIEMLNGSVPNNELFGVIYTVDEGDDWTDPKVLEKANPNIGVSVYRDFLLSQQQRAINNARHAGVFKTKHLNVWVAARTAFFNLVSWQNCEDKTLTLELFEGQPCVLAFDLARKLDMNSMARLFTREIDGKTHFYSVAPRFWVPYDTVYSVEKNEDRRTAERFQKWVEMGFLTVTDGAEVDYRYILEEAKAANKLNPVSESPIDPFGATGLSHDLADENLNPVTIIQNYTNMSDPMKELEAAIESGRFHHDGNPIMTWCIGNVVGKTIPGNDDVVKPIKEQAENKIDGAVALIMAVGRAMLYEKEDTLSDHIESYGIRSL
complement(2060334..2060828)       PHAGE_Salmon_ST64B_NC_004313: terminase small subunit; STM474_2056; phage(gi23505446)     1.14e-117           SalmonellaentericasubspentericaserovarTyphimuriumstrST474MAGTAGRSGRRPKPTARKELAGNPGKRALNKEEPVFTPINGVSPPDWFNEEDMPLASVMWELTTKELCGQGLLCVTDLAVLERWCVAYEFWRRAVKNIAKEGNTITGAMGGKIKNPELTAKKEQESEMSSTGSMLGLDPSSRQRLIGLAGQKKTSNPFLKMINS
complement(2060954..2061304)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; STM474_2057; phage(gi23505500)     2.64e-81            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MPPRTPKACRVRGCRSTTTDPSGYCESHRSEGWKQYKPGQSRHQRGYGTKWDVIRARVLKRDKGLCQLCLRSGVVREAKTVDHIIPKAHGGTDTDSNLQSLCWPCHKAKTARERLK
complement(2061887..2062306)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; STM474_2058; phage(gi23505498)     5.69e-98            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MKYPTVIVNGVSVRVDEDGRYNLNDLHAAAVANGEATESQRPSNFLRSAQIKRFISALKAKAQKRALKEIQPLKVIKGGVDSGVWGVELLAIRYAAWIKPEFEIEVYEVFKTVVRLGVGAMSRLNRIDHIINTETKAIS
complement(2062519..2063004)       PHAGE_Salmon_ST64B_NC_004313: lysis protein; STM474_2059; phage(gi23505497)          5.50e-114           SalmonellaentericasubspentericaserovarTyphimuriumstrST474MNLLPVLLKKYWLQLSVTLLIAVLAWTTDHYRDNAIQYKSQRDTASHSLTLANETISDMEVRQRDVAALDARYTKELADAKAENDALRDDVAAGRRRLLVNATCPAVSTGKSTSAARVDNAARPRLADSAQRDYFTLKERVTTMQKQLEGAQDYIRTQCLK
complement(2063001..2063615)       PHAGE_Salmon_ST64B_NC_004313: lytic enzyme (putative glycohydrolase); STM474_2060; phage(gi23505496)     1.23e-151           SalmonellaentericasubspentericaserovarTyphimuriumstrST474MNESQFQQAAGISAGLSARWYPHITAAMSEFGITAPLDQAMFIAQVGHESAGFTSLVESFNYSVDGLMKTFGKRLTPYQCEMLGRVDGKQVAHQPQIANLVYGGRMGNKDAGDGWKYRGRGLIQITGLENYTRCGVALKLDLVANPGQLELDRHAARSAAWFFVTRGCLKYSGDLVRVTQIINGGQNGIGDRRERFEKAKSVLV
complement(2063618..2063962)       PHAGE_Salmon_ST64B_NC_004313: lysis protein (holin); STM474_2061; phage(gi23505495)     1.23e-56            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MKMHFDPHSWDSWIELFQSWWRGDVPIGGVVMAIVVAFFRMVYNGSSWKETLFEGLLCGSLTLTAVSALDYFDVPKSLTIAIGGTIGFIGVKKISTIISTYFSNRFGGGNPPQV
2064003..2064131                   hypothetical protein; STM474_2062                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MSGKRKGRQTAACEWLPRGGGVFPGLILLIRQKHNVKRGKNE
2064124..2064558                   PHAGE_Shigel_SfIV_NC_022749: hypothetical protein; STM474_2063; phage(gi557307562)     5.08e-08            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MSNYSDLFQIIKIRVCQNNDFPTYSLAGTNNYRASQVWYRIGQIFTLECVLAEYRRCCSSDYYLLDNEKALHHLIFQITKWKLEDIRGLSLNDSLFIISDRLKPDYMPAEAAQFLRSLKLPVNHYSVDDFSEADWDPRENSVFL
complement(2064878..2065198)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; STM474_2064; phage(gi23505493)     1.16e-72            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MARQILWPKQSIADLLNKEMRIEESDFVERCILSALSKDDPVFVVGIDFYARRKRVSDIGRYLQEIAPWLTRKQAEDRVRWCVNHFNCAVFLAFRDAMRKQNEKIS
complement(2065512..2066507)       PHAGE_Salmon_118970_sal3_NC_031940: site-specific RNA endonuclease; STM474_2065; phage(gi100127)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MIVRALLTPEIAPRMGVVLFRPGAELMPLFMQGRVLLEPEPEQYSSFACGAVPAVSQPLADDPAVRDVFRNESVIYRAGGLDSLESWLLRGNGCQWPHSDWHSEQMTTMRHAPGAIRLCWHCDNLLREQFTERLKSIAVENTTKWVLSVVCRDLGFDDMHAVTLPELCWWMVRNDLAEVLPESAARKALRMPKAIVQSATRESEIVPSVPATSIVQDKAKKVLALRVDPESPESFMLRPKRRRWVNERYTRWVKSQPCACCGKQADDPHHLIGHGQGGMGTKAHDLFVLPLCRTHHNELHADTVAFEEKYGSQLELIFRFIDRALAIGVLS
complement(2066509..2067369)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; STM474_2066; phage(gi23505490)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MNNLMVIDGIEVRRDVHGRYCLNDLHRAAGGEQKYRPKYWLDNKQTRELIEQLFTEGGIPPSEQNQSVSFFQGGSDTQNLGIAPVNTVRGGAEQGTYVCKELVFAYAMWISPSFHLKVIRTFDRITSAPQTSSGMAADKMQAGVILLGFMRKELNLSNSSVLGACQKLQEAVGLPNLAPQYAIDAPAGALDGSSRPTLALSALLKQHGIRMTANQAYQQLAKLGVVEHRERYSRSAINGIKKFWSLTAKGCMFGKNITSPANPRETQPHFFESKFPELLKLLDTVH
complement(2067772..2068665)       PHAGE_Salmon_ST64B_NC_004313: putative DNA methyltransferase; STM474_2068; phage(gi23505488)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MSNKYCQALAELRNKSAHELKEVGDQWRTPDLLFWGINAMFGPLTLDLFADDDNAKCPVWYTADDNALVQDWAEMLESIGGAAFGNPPYSRSQYHEKQAITGMTHIMDHTMEMREKGGRYVFLVKAATSETWWPEDADHIMFIRGRIGFDLPVWFVPADDKQKTTGAFFAGAIAIFDKSWRGERFSYISRTELEEKGKAFMSLVEFAAGKVQPPATTAPEQEEPIIAPAVLPYVDSRIWPLEVGLVFNQVEGADSLDASQQNKLKANINQLWLERMPTSEIITTAGGLVSSMRREVA
complement(2069149..2069967)       PHAGE_Salmon_ST64B_NC_004313: putative replication protein; STM474_2069; phage(gi23505486)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MSMELMVKAMKIRVGNPLRKLVLIKLADNASDQGECWPSYQHIADQCEISKRSVMNHIAALCESGLVKKVTRKGEKGNSSNIYLLHLDGAGDSLGGSANNSLPGAANSLGSAGVAPGGSEGDSPRTSHSFEPVKEPVNESKTIGASAYASSSVCFARQEYSPEFEQAWLAYPKRAGGNSKSAAYKAWKARLKEGVNAETMLEGVKRYAGWVSATGNSGTQFVKQATTFFGPDRHFGELWAVPAAPSPGREDPMFKSSYGNVDYSQIPTGFRG
complement(2070185..2071342)       PHAGE_Salmon_ST64B_NC_004313: putative antirepressor; STM474_2070; phage(gi23505485)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MNSLTVNNRLSQQPGMYEYRPLRHECRLPNSLVVRNHREHSLTVGDESCRNLTAGFGMEGDFMSMSFAGNQKLSALSICARAIRMSVLALCGNSGVILLSVKRQEHIDSAIPGRYTVQAPHKAGAGRGNPEFNIEHNRAHAVFSCHEHCYAQIMVGRAGPVSAGPGSMLTGISTPVRLTTYKVVESLGGEFIEFNIEAATMATVPTLAQPEIRIINGQAVTSSLAVADYFIKRHADVIRKIESLECSTLFRQRNFAFTSISINQPNGGTRKLPCYQITRDGFAFLAMGFTGKRAAQFKEAYINAFNQMEKQLSIPSVLSDAAHNASVLYSYISSIHQVWLQQLYPMLEKAESPLAVSLYDRINDAVALASLINMTLNRSEVRGRK
complement(2071339..2071893)       PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; STM474_2071; phage(gi100118)     4.16e-135           SalmonellaentericasubspentericaserovarTyphimuriumstrST474MGHEPEWKVEKQPRWLVAAIKKTISSLHGGYEEAAEWLDVTKDALFNRLRTGGDQIFPIGWALVLQRAGGTYHLAHSVARASGGVFVPLADMEEVDNADINQRLLEAIEQITSYSQQIRVAIEDGVIEPHEKAVIDEELYQAIAKLQQHSTLVYRVFCAPEKGDARECAAPGAVASNFMEKTNA
2072244..2072939                   PHAGE_Salmon_ST64B_NC_004313: regulatory protein; STM474_2072; phage(gi23505482)     4.14e-170           SalmonellaentericasubspentericaserovarTyphimuriumstrST474MNIGNRVRQLRRAKNMKIAELAEAIGVDAANISRLETGKQKQFTEQTLSRLADCLGVDIAELFTSDPKGNTVCKHSDMRKDSANVKDLFRIEILDVSASAGNGLIQGGDVIDVIHAIEYNKDKALAMFGGRPAAELKVINVRGDSMAPTIEPGDLIFVDISINQFDGDGIYVFGFDDKIYVKRLQMIPDKLLVISDNTNYREWSITKDNECRFGVFGKVLISQTQSLKRHN
2073754..2074125                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; STM474_2073; phage(gi23505481)     6.06e-86            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MNDDRMTVVPDFLGELDAGVFMNKIAAALNTVGLGVLNNGNKGKVVLTFDFERMGNSVEEKRVKIKHKLQYSTPTPRGKASEEDTTETPMWVNKGGKLTILQEDQGQLFSIKGTTDGKLKAAQ
2074183..2075010                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; STM474_2074; phage(gi23505480)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MSQLDSGTFQQVKDLVLSGYHLNDIQGLACPTALLPAGTGVESLERFALERFRFRGAMTTTSIEDFVRYSKGYASTTEKARCFIDADHMTARSVFNIGTLDNPGHADNVASVTLKQTAPFRALLQINGERLKQKQIAEWLEDWSDYLLAFDSDGKTMQISQAAQAVRRITIQQATQQDHEDGDFSGKKSLMQSIEASSKDVMPVAFEFKCVPYEGLGERAFSLRNSLLTGDEPRFVLRIVQLEAQEEAIANEFRDLLISKFDGESVETFIGNFKA
2075147..2075686                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; STM474_2075; phage(gi23505479)     2.21e-129           SalmonellaentericasubspentericaserovarTyphimuriumstrST474MSFIQTLSGKQFDYLSATIDDIDIEDIAVALSNICRFSGHLPEFYSVAQHSVLCSQLVSPEFAFEALMHDAAEAYCQDIPAPLKALLPDYREIEKRTDQLIRFKFGLPLEEASVVKYADLTMLATERRDLDIDDSIPWVILEGIPPTDLFEIYPLRPGQAFGLFMARFNELMELRQCAA
2076496..2077113                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; STM474_2076; phage(gi23505476)     1.65e-152           SalmonellaentericasubspentericaserovarTyphimuriumstrST474MSNIDKQALRERYSPKPAPECHICGAEMTIQRMSASRITYGCTGATYDDKGCHYAEGRSIADDHYEQSRVTVVDVSDPNVLALLDELDSANGYVSAYEAEKWHYHGLAESEGERADRAEKRVAELEYIATDYGVKFQKTQDALKHQALLHKSQMEAAEKQVEELTMWVKRLANSLRNTKPNSKLYGAAMDYLSRKGLISVEDVLR
2077110..2077943                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; STM474_2077; phage(gi23505475)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MTTITKEWLQQTIAEFENTRDDIPFGLDDDDAKILLVLKRALASLDAEPVRYLNKFSGTCVTLEQQSNAADDVAVYIPLYTAPPAPVVPEEAYSDDCPDLYASQPEAWAAGWNACRAALLHGAEPVSQTYELPQTQFEQVADLYEMQFDDGRTCAFHTDGAKAAQWLLACDGNKVQEYVRLERYHEALIGNSPVIPDDWVMVPKKLTAENGAKSLLSGEFLETTFISFPECLADEECESCDGSGRIKIEVPVRWTTIKAIWNKGVEHFRSSTATGDN
2078019..2078516                   PHAGE_Salmon_ST64B_NC_004313: Endodeoxyribonuclease; STM474_2078; phage(gi23505474)     9.84e-122           SalmonellaentericasubspentericaserovarTyphimuriumstrST474MFFDPQSGEIGPEFYTAVSLESAMEQGAVPDGDTILWWLRQSPEARAAICADAVSVTTALIEFNDFITCHADDLKYLKVWGNGANFDNVILRGAFERASLPCLWNYRNDHDVRTMVTLGRAIGFDPKRDMPFEGDMHNALADARHQAKYVSAIWQKLIPPTSNNI
2078785..2079774                   PHAGE_Salmon_ST64B_NC_004313: Integrase protein; STM474_2079; phage(gi23505472)      0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MGRKRAPGNEWMPKGVFFRPSGYYWKPGGSTENIAPADATKAEVWVAYEKKVEGRKNRITFTQLWRKFLASADYADLAPRTQKDYLAHEKYILAVFGDAEAKAIKPEHIRRYMDARGQKSRVQANHEHSSMSRVFRWSYQRGYVPGNPCVGVDKFPKPQRDRYITDEEYRAIYNNATPAVRAAMEIAYLCAARVSDVLKMNWNQILEKGIFIQQGKTGVKQIKSWTDRLRDAVEICREWGEEGPVIRTMYGERYSYKGFNEAWRKARKAAGDDLGRPLDCTFHDLKAKGISDYEGTAKDKQKYSGHKTESQVLVYDRKVKMSPTLDRKR
complement(2079888..2079977)       tRNA                                                                                 N/A                 GGAGAGATGCCGGAGCGGCTGAACGGACCGGTCTCGAAAACCGTTGCGGGGGTAACTCCGCCGAGGGTTCGAATCCCTCTCTCTCCGCCA
2080066..2080863                   putative inner membrane protein; STM474_2081                                         N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MIKWPWKAQEITQNEDWPWDDALAIPLLVNLTAQEQARLIALAERFLQQKRLVALQGFELDSLKSARIALIFCLPILELGIEWLDGFHEVLIYPAPFVVDDEWEDDIGLVHSQRVVQSGQSWQQGPIILNWLDIQDSFDASGFNLIIHEVAHKLDMRNGDRASGIPFIPLRDVAGWEHDLHAAMNNIQDEIDLVGESAASIDAYAATDPAECFAVLSEYFFSAPELFAPRFPALWQRFCQFYRQDPSQRLRVSAAEGDYGEESEH
2080964..2081039                   tRNA                                                                                 N/A                 TCCTCTGTAGTTCAGTCGGTAGAACGGCGGACTGTTAATCCGTATGTCACTGGTTCGAGTCCAGTCAGAGGAGCCA
2081934..2082009                   tRNA                                                                                 N/A                 TCCTCTGTAGTTCAGTCGGTAGAACGGCGGACTGTTAATCCGTATGTCACTGGTTCGAGTCCAGTCAGAGGAGCCA
2082173..2082646                   PHAGE_Escher_phiV10_NC_007804: putative protease; STM474_2084; phage(gi89152430)     7.84e-53            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MALTDTAGGTQTDPGTGKPSENPPAAPNKPTPPKEETPPGAPEKYAFTAPEGQELDTSALAQFEPVARELNLTQEQAQKLVDVYPKVLAGVQQQQAESWQKQTEDWAAAVKADKDIGGDKLASNLGAAQRAIDTFGTKELKEYLDGTCARSLVNAAP
complement(2082744..2082878)       hypothetical protein; STM474_2085                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MNAGTPKTGAWRGVVVVRHFVALRDESDAPVECRARKIADSGAD
2082985..2082996                   attR                                                                                 N/A                 GCAGCCTGTACC
2083094..2083819                   PROPHAGE_Salmon_LT2: integrase; STM474_2086; phage(gi16766072)                       5.31e-45            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MFSKSQEKCMGKLGGEMKALAKHCGGSHKTVNDCIHIVQRFDHHLRALNVHIQRVAQIKVRHIESYIHERLAQGIGKRTLQNEMASLRAVLQQAGRKQVAEHEWLTNKSLGLAGASRSGTRQAITPEHYHHVLETARMKAPGLAAALELARLMGLRSQEAVQSVQWIWGMGTGVGGMWRRCMGKFDSWLRASSGWSRLPPFTVSERLGGGGKYQAALPSPLQSKPESDRTNVEINERTCPE
2090551..2090562                   attR                                                                                 N/A                 TAGCGTAAGGGT

#### region 4 ####
complement(2328677..2329147)       PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; STM474_2323; phage(gi100082)      1.37e-66            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MTTFRDVSTQEGETYLSAVQSKRRTIAMGFPSPASDYVETRISLDQQLISQPAATYFMRASRSHFREGIIQGALLVVDASLSACDGSLLICAIDGEFRIKRYRTHPQPHLINLENGRKEALPEDGDGYNSSHAIFGVITYIINDARNAEFDDCPVM
2329208..2329498                   PHAGE_Klebsi_phiKO2_NC_005857: Gp22; STM474_2325; phage(gi46402108)                  2.87e-34            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MLDKPLCGDGLPAIRFLLYRSIPGYFNIDGLPGAKDIILGELTKRVHRIFPDADVRVKPMMTLPAINTDASKHEKEQISRTVQEMFEEAEFWLVSE
2329846..2331675                   PHAGE_Salmon_g341c_NC_013059: O-polysaccharide acetyltransferase protein; STM474_2326; phage(gi255252697)     2.73e-71            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MIYKKFRLDINGLRAFALISVVLYHFGVPYVSGGFIGVDVFFVISGFLMTGIVLERVDHKGVLDFYIARFLRIVPALVFAILLLMIFGLFTLSTNEYEALSKNAISSLLFYSNNYYAIHSSYFDSSSEFNFLLHTWSLSVEWQFYILYPLLVIIVKKLRFPVGLSLSVILAMSLAITLMRVTGTKEDIFYLIPTRAWEMLAGGLVYIASVRYKMPEWIKHCEVYGIVLIVVAVVILHSNGYWPSYSALAPVLGASMVILANKQNSLFTSNRIAQWVGKISYSVYLWHWPVIVAMKHYDIEFSAINIFFGVIVSFALGDISYRTIENTLRKRVKLQFNIVLFSSTLALCLFVMFTKGVSFRFSDTLKQVVEYRMDNSPWRPDICFLNPDQDYSAFSKCQDKMTEKSFVVWGDSHAAHLMPGLKSVFGNSLNITQRTASLCPPIIGLQKDDRPYCKDINDMVAKEISDNKPTTVLMSALWPVYPMRDYLPETIKFLKDNKVKNIIIVGPFPVWKKTMIDTIEDMGINSGRTVPWSMTDETRNLRDNDKYLRELAKEHSLTYISPLETMCTESYCKAIIGNRIAYPIQYDNAHLTPEGSGWFIEEVKKQISK
complement(2331729..2332172)       PHAGE_Escher_pro483_NC_028943: tail fiber assembly protein; STM474_2327; phage(gi971758532)     2.08e-37            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MSIICFSSTSNTYFSEENIPAYKASGLWSNDFYALTDEEVDKYYMKTPPKGMYLGSSNGRIAWVCIPPPTQDDLISAANQEKKKRIDQANEHMNSRRWPGKAALGRLTGDELAQYNLWLDYLDALKAVDTSVAQNIACPIRKAIHIK
complement(2332550..2333077)       PHAGE_Sodali_phiSG1_NC_007902: putative phage tail fiber assembly protein; STM474_2328; phage(gi89886004)     9.44e-15            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MRHFKNFTKTTELTLVQQKLSENCSIQFIQDESGVDWYVLQKLFQPDTLKIQYDKTGLIIAADKDATKLFPLNCSVVEFADTDIPDGFQPGNFTYSNGVIAPVQIDYVALATAERDRRMTSVTAKINQLVEAQDDGDITAAELSELTALREYRTKLRRLALDVAPDINWPEYLNK
complement(2333080..2334381)       PHAGE_Salmon_ST64B_NC_004313: tail protein; STM474_2329; phage(gi23505468)           5.36e-63            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MISFVRHIRLLFLLIRKEKRMHRIDTPTAQKDKFGQGKNGFTNGDPATGRRATDLNSDMWDAVQEEVCTVIEAAGIPLSKGEHTQLHAAIGRLIYEQVKTRLEKNQNGADIPNKPLFLQNVGLVDVLFKGDGRFLAGTFVSDAIDRTSIGARAATGCQFMRAHQAPDAPDQVSFWQIITLSEVVSPTTVVDVLAVSGNNVLFGHGTGTGITSWRQVAMLEGGAFTGGISAPNMRGDTLVTVGDGTGGMAKGDVDGAGFNGNNLNIKSWNGIGFQNSEDLAIRAYISTRLGVIAAAENLQAGSAIFNKNGDVYGDIWGGGSGPGWLSAFVASKPARQYITMVGVYQNDKTKPFMLHDDGSGVFLATTDMLSGYVQSIRFGAVEHGNLYRSPGFADQLGYVITGVENGDSNDTPDRIQRRLLQLKVNGQWYTVGA
complement(2334382..2334900)       PHAGE_Entero_SfV_NC_003444: capsid protease; STM474_2330; phage(gi19548994)          1.94e-97            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MSEREIRCYSGEVRAETHDSEPSRIIGYGSVFDSRSELIFGSFREIIRPGAFDEVLNDDVRALFNHDPNFILGRRSAGTLALTVDERGLRYDITAPETQTIRDLVLAPMQRGDINQSSFAFRVARDGEEWYQDEDGVVIREITRFSRLLDGRPVQAPAILRSERGAILLLNV
complement(2334914..2335243)       PHAGE_Shigel_SfIV_NC_022749: holin; STM474_2331; phage(gi557307576)                  3.55e-42            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MPHNPNTWPDLLELLQSWWRGDTPLGAVIMSIVMAGLRIAYFGSGGGWKRKMLEILLCGALTLTFASALEYVGWMSRNEARAFEDMNPKDGLDEMLVSVNASRPAKTTI
2335540..2336871                   KAP P-loop domain-containing protein; STM474_2332                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MLETLSFTERDEFQRRNIAENIIKLLKPEADISPLVIDGAWGTGKSEFSIKLKNLIIEQETESKVVYVDAFKGDHAESPLLLITSAIASILPEEEKQNFIKRSLPAIRFGLKTVLKAGAGWFLRQEASEVAEEFQDAMKKASNAAIDGTIENILEDHMESEKNINSLKSCIEDISNKQKIVIIIDELDRCKPSFSTNIIETIKHIFDINNVFFILVTNTEQLKASINHIYGYSINSQKYLDKFIKYTITLPDTCLINGHNVCKTSVIYWDHLVGETTLLNKINSLVGSFICDLIQRTNLSLRETQTFSRNLNIFRLLNDNECKSNDPFINMIVVVAVFIHCFGDKEKLKQEITAESISYLADLLNIKEIPYSYERRSQIPEISIIFFGIIKDSITLNERFAPKSDEELKKFTNVYTDYEHLKFWSTTPRELMIKYINQMSFIQ
complement(2336900..2337268)       PHAGE_Shigel_SfIV_NC_022749: antitermination Q; STM474_2333; phage(gi557307572)      6.55e-60            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MMRDIQMVLERWGAWAASDSSGVDYSPIAAGFKGLLPYTCKTRVACSDNDALIVEGCLARLKQKRPDEHSLLVAHYLYRISKRKIAKVRGKDEKLVRIEIQLAEGFIDGCLSMLDLTLDMDV
complement(2337283..2338278)       PHAGE_Shigel_SfIV_NC_022749: hypothetical protein; STM474_2334; phage(gi557307571)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MIVRALLTPEIAPRMGVVLFRPGSELMPLFMQGRVLLEPEPEQFSSFASGAVPAVSQPLADDPAVRDVFCNESVIYRAGGLDSLESWLLRGNGCQWPHSDWHSEQMTTMRHAPGAIRLCWHCDNLLREQFTERLKSIAVENTTKWVLSVVCRDLGFDDMHAVTLPELCWWMVRNNLAEVLPESAARKALRMPKAIVQSATRESEIVPSVLATSIVQDKAKKVLALRVDPESPESFMLRPKRRRWVNERYTRWVKSQPCTCCGKQADDPHHLIGYGQGGMGTKAHDLFVLPLCRTHHNELHADTVAFEEKYGSQLELIFRFIDRALAIGVLA
complement(2338280..2338510)       PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; STM474_2335; phage(gi100063)     1.79e-50            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MTANQAYQQLAKLGVVEHRERYSRSAINGIKKFWSLTAKGCMFGKNITSPANPRETQPHFFESKFPELLKLLDTVH
complement(2338601..2340967)       PHAGE_Phage_Gifsy_2_NC_010393: prophage virulence determinant; secreted effector protein; STM474_2336; phage(gi169257322)     1.86e-86            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MPFHIGSGCLPATISNRRIYRIAWSDTPPEMSSWEKMKEFFCSTHQTEALECIWTICHPPAGTTREDVINRFELLRTLAYAGWEESIHSGQHGENYFCILDEDSQEILSVTLDDAGNYTVNCQGYSETHRLTLDTAQGEEGTGHAEGASGTFRTSFLPATTAPQTPAEYDAVWSAWRRAAPAEESRGRAAVVQKMRACLNNGNAVLNVGESGLTTLPDCLPAHITTLVIPDNNLTSLPALPPELRTLEVSGNQLTSLPVLPPGLLELSIFSNPLTHLPALPSGLCKLWIFGNQLTSLPVLPPGLQELSVSDNQLASLPALPSELCKLWAYNNQLTSLPMLPSGLQELSVSDNQLASLPTLPSELYKLWAYNNRLTSLPALPSGLKELIVSGNRLTSLPVLPSELKELMVSGNRLTSLPMLPSGLLSLSVYRNQLTRLPESLIHLSSETTVNLEGNPLSERTLQALREITSAPGYSGPIIRFDMAGASAPRETRALHLAAADWLVPAREGEPAPADRWHMFGQEDNADAFSLFLDRLSETENFIKDAGFKAQISSWLAQLAEDEALRANTFAMATEATSSCEDRVTFFLHQMKNVQLVHNAEKGQYDNDLAALVATGREMFRLGKLEQIAREKVRTLALVDEIEVWLAYQNKLKKSLGLTSVTSEMRFFDVSGVTVTDLQDAELQVKAAEKSEFREWILQWGPLHRVLERKAPERVNALREKQISDYEETYRMLSDTELRPSGLVGNTDAERTIGARAMESAKKTFLDGLRPLVEEMLGSYLNVQWRRN
complement(2341136..2341339)       bacteriophage tail fiber assembly protein; STM474_2337                               N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MPDTDENRRADIHAAGSLKTVKSFKGFIRRKSCAGRQNRKLNARALIPDDLVIVESDPEKIDTLAVK
complement(2341285..2341404)       hypothetical protein; STM474_2338                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MLLRVLRVMFPGCGLLARALQSCLIRMKTVALIFMLLAV
complement(2341636..2342427)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber protein; Lambda gpStf (gpN) homolog; STM474_2339; phage(gi169257320)     2.99e-83            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MISLEDASLTKKGIVKLSSATDSDSEALAATPKAVKTVMGEVRTKAPLDSPAFTGTPTTPTPPGDAKGLQTTNAEFVRKLIAALVGSVLEPLDTLQELADALGNDPNFATTVLNKLAGKQPLDETLTALSGKSVDGLIEYVGLRETISRAADALQKSQNGGDIPDKDLFVRRIGAARAFDGAVIIGCDDNPWTTAEFIVWLESQGAFNHPYWMCRGSWSYAYNKIITDTGCGNICLAGAVIEVMGVRGAMTIRVTTSHSVSGW
2342616..2342933                   PHAGE_Entero_HK225_NC_019717: DNA damage-inducible protein; STM474_2340; phage(gi428782403)     7.09e-07            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MPPRLLWSPYLRCSPQMLRMKLPTKIPLENQPVRAGFFMPTIKKLADARDVILHELILHELIGHLSCAVVTVKSMQATNVNHVCTKTEKAHLHPILEKMFAVAGK

#### region 5 ####
2726693..2728186                   PHAGE_Phage_Gifsy_1_NC_010392: leucine-rich repeat protein; STM474_2689; phage(gi169257209)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MTYRLKKRMKIGFQPAILQYAYTSNEATSNLELLNKWRIESPDIEKEERNSIYDKIIEANHTGSLSITAHHVTSIPVFPDNLSELNLSSCYTLESIPNLPDGLKSLTISGNQTIKISYFPDSLESLSIDMQAYEENYTFPALPYGLKSFTACYGKFLPPLPPHLSSLSLQNFSEILCAELPYKLDKLDLQNCPFLPLMKMLPEELKELSIELIRTVPGTVIDDILPDKLKKLSINFCDNIKLPVKLPVNLKSINLSSRTPIAWEIPTCNLPAHIDISTDGYVKLNPEFLTRSDITFSNKPAGDVLSFQPGDVVYGLCKARDRVNTLVNSLYYFSKKDIIIQNTLTDAVWDRKNRAVFNKDEKIAERLNDVQRGIFFREFLSQHKKYNITEDKYSDLSNEECWIKTSKAGLEFQTRLRERSVIFVIDNLVDAISDIANKTGKHGNSITAHELRWVYRNRHDDLVKQNVKFFLNGEAISHEDVFSLVGWDKYKPKNRNR
complement(2728390..2728518)       hypothetical protein; STM474_2690                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MSENLIKEKIISIDIFLFLQVFNACPNKRAQMVKNLVGHKKV
2729043..2729588                   PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; STM474_2691; phage(gi169257210)     4.27e-133           SalmonellaentericasubspentericaserovarTyphimuriumstrST474MMRFVYIYILVIYGSYLWFSLGGNMFTINSTNRVASTIAPYACVSDVNLEDKATFLDEHTSIHANDSSLQCFVLNDQHVPQNTLATDVEGYNRGLQERISLEYQPLESIVFLLGTPAVLETKESLSLPVSPDALTQKLLSISSNDECKLSGSTSCTTPASHNPPSGYIAQYRHSAEVFPDE
complement(2729509..2729628)       PROPHAGE_Xantho_33913: ISxcd1 transposase; STM474_2692; phage(gi21231544)            5.54e-07            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MIYYSAQLFITLCFIHPGKPLQNACIERYNRTVGYDWLG
2729773..2729784                   attL                                                                                 N/A                 ACAAAAACCATG
2730727..2730927                   PHAGE_Phage_Gifsy_1_NC_010392: PagK-like protein; STM474_2693; phage(gi169257211)     2.55e-43            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MKHVKSVFLAMILILPSSLYSALTIAADSQDHKKEETIKPMPQKWCNLWPAGIPFPEDWFKMCRGY
complement(2731024..2731602)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage side tail fiber assembly factor & structural component; Lambda gpTfa homolog; STM474_2694; phage(gi169257212)     4.99e-141           SalmonellaentericasubspentericaserovarTyphimuriumstrST474MTFKMSDTPQTIKIFNLRSDTNEFIGAGDAYIPPHTGLPANCTDIAPPDIPASHIAIFDAETGTWSLHEDHRGETVYDTTTGNQVYISAPGPLPENVTSVSPDGEYQKWDGKAWVKDEAAETAARLREAEGTKSRLLQMASEKIAPLQDAVDLDEATDKEKASLLAWRKYRVQVNRVDTLKPVWPEKPASSL
complement(2731592..2732416)       PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical protein; contains pfam01661, Macro, Macro domain; STM474_2695; phage(gi169257213)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MIKLILSAPVPAMAVAFEHSFQNTENVEIIPGPFETIPEFDCMVSAANSFGLMDGGVDAAITAYFGPQLQERVQQHILREYLGEQPVGTAFVIETGNSKYPWLVHAPTMRVPLIIDGTDAVYNATRAALLAIFQHNKSAGEDRKIKSVVFPAMGAGCGQVSPGSVARQMKLAWDGFINCTTEINWQYASARQNAVFSTTAYCPSKALCPNARTEYIGFGDYRTYCKKSGNTCISPRHQVDDIYIGAHSHAVFLSPNSHGKHLKPEYLSGVKNDV
complement(2732413..2734785)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage side tail fiber protein; Lambda gpSft (gpN) homolog; STM474_2696; phage(gi169257214)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MPVLISGVLKDGTGTPVQNCTIQLKACRTSTTVVVNTVASENPDDAGRYSMDVEQGQYTVTLLVEGYPPSHAGVITVYDDSKPGTLNDFLGAMTEDDVRPEALRRFEAMVEEVARQASEASRNATAAGQASEQAQTSAGQAAESATAAVNAAGAAEASATQAASSAASAESSAGTATTKAGEASASAASADTARTAAAASAAAAKTSEANADVSRTAAGDSAAAAAASATAAQTSAARAGASETAAKTSETQAASSAGDAGASATAAAASEKAAAASAAAAKISETNAATSASTAAASATAASSSASEASTHAAASDTSASLAAQSSTAAGAAATRAEDAAKRAEDIADVISLEDASLTKKGIVKLSSATDSDSEALAATPKAVHAVMDEVQTKAPLDSPVFTGTPTTPTPPDDAKGLQTANAEFVRKLIAALVGSVPESLDTLQELADALGNDPNFATTITNMIAGKQPLDDTLTALSGKSIEGLIEYVGLRSTIDKAAGALPAGGTAVAANRLASRGALPALTGTTRGSDGGLIMGEVYNNGYPTQYGNILRLTGTGDGEILIGWSGTNGAPAPAYIRSHRDTADAEWSEWAMLYTTLNPPPDSHPVGAAIAWPSDATPAGYALMQGQSFDKSAYPLLAIAYPSGVIPDMRGWTIKGKPISGRAVLSQEMDGNKSHSHTARAQDTDLGTKSTSSFDYGTKSTNTTGNHTHQFGGYINSYWGDSNHTSFQPGGGAWTQAAGDHAHTVYIGGHEHTMYIGPHGHVVIVDADGNAETTVKNIAFNYIVRLA
complement(2734839..2735081)       PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; STM474_2697; phage(gi169257215)     1.13e-53            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MTMSRVISLAAGVSLSVLFSTAAVADNGRGSGNSNIENQTRIYTGTDRGQKQHREAKGQIITRSVQCSLPAYLRDPDNQC
complement(2735120..2738482)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage host specificity protein; tail fiber; Lambda gpJ homolog; STM474_2698; phage(gi169257216)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MGKGGGKGHTPREAPDNLKSTQLLSVIDAISEGPIEGPVNGLQSVLVNQTPVVDRDGNTNIHGVKVVYRVGEQEQTPLEGFESSGAETVLGVQVKYDNPVTRTITAANIDRLRFTFGVQSLVEANSKGDRNPTSVRLQIHLERYGQWVVEKEITITGKTTTQYLASVIVDNLPPRPFGIRMVRVTADSTTDQLQNNTVWSSYTEIIDVRQRYPNTAVIGLQVESEQFGSQQVTRNYHFFGRIIHVPSNYDPVARTYSGIWDGTFKPAYSNNPAWCLWDVLTHPRYGMGQRIGAADVDRWALYAIGQYCDQMVPDGFGGTEPRMTFNAYLAQQRKAWDVLTDFCSAMRCMPVWNGQMMTFVQDRPSDTVWTYTRSNVVMPDEGTPFRYSFSARKDRHNAVEVNWIDPDNGWQTSTELVEDTVAISHYGRNLVKMDAFGCTSRGQAHRAGLWLIKTELLETQTVDFSVGAEGLRHVPGDVIEVCDEDYAGISLGGRILSVDRARRILTLDREITLPSSGTTLISLMDGEGLPVSVDVQSVTDGVQVQVSRIPDGVAEYSVWGLKLPSLRQRLFRCVAVRENDDGTYAITAVQHVPEKESIVDNGASFDPQPGTIHGTVPPAIQHLTTEILAEEGQYQVLARWDTPRVVKGASFSLRLNVAAEDGSDRLVSSAGTPDTQYRFRGLTPGRYTLSVRAVNSQGQQGDPASTQFSISAPAAPSFIELTPGYFQITATPRQAVYDPTVQYEFWFSDAQITDIHQVENAARYLGTALYWIAASVNIRPGRDYYFYIRAVNQVGKSAFVEATGQASNDAAGYLDFFKGQITESHLGKELLEKVELTEDNASKLQQFSKEWQDANDKWNAMWGVKIEQTKDGKYYVAGLGLSMEDMPDGKISQFLVAADRIAYINPANGNETPGFVMQGDQIIMNEAFLKYLSAPTITSGGNPPAFSLTPDGKLTAKNADISGHINAVSGSFTGEINATSGKFSGVIEAREFVGDICGSKVMQGVSIRETNDERSTSTRYTDSATYQIGKTITVMANCERNGGSGAITVTININGQVKTAEVIPYTAGLPAMYQTVVFSVYTTSPVVDISVSLRVRGQYTTSASVWPLVMVSRSGNNFTN
complement(2738544..2739191)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tip assembly protein; Lambda gpI homolog; STM474_2699; phage(gi169257217)     5.57e-156           SalmonellaentericasubspentericaserovarTyphimuriumstrST474MATTHALHLATPGMARICLYGDLQRFCRRVSLQVASGAEAVRALAVQLPGLRQKLNDGWYQVRIAGDDVTADTLTTSLHDPLPPGAVIHIVPRLGGAKSGGVFQAVLGAALIAVAWWNPAGWLGAAAVSGMYMTGASMVLGGVAQMLAPKPKMSEMRQTDNGRQNTYFSSLDNMVANGNTLPVLYGEMQVGSRVISQEVSTADEGDGGQVVVIGR
complement(2739089..2739724)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tip assembly protein; Lambda gpK homolog; STM474_2700; phage(gi169257218)     6.79e-148           SalmonellaentericasubspentericaserovarTyphimuriumstrST474MNISAAPEDYFRMAPEDWLRAETQGDIVALVHSHPGGQPYLSDVDRRLQVQSDLPWWLVCAGQVHKFRCVPHLTGRHYKHGVFDCYTLFRDAYHLAGIDMPDFHRDDDWWRHGENLYLDNLETTGFYRVSAASAQPGDVLICCFGSSVPNHAAIYCGDGELLHHIPEQLSKRERYTDKWQRRTHSIWRHRAWRASAFTGICNDFAAASACR
complement(2739833..2740534)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tip assembly protein; Lambda gpL homolog; STM474_2701; phage(gi169257219)     2.51e-174           SalmonellaentericasubspentericaserovarTyphimuriumstrST474MMQDISQDTLNESAKLAQSARITLWEIDLTQSGGDRYFFCNEANEKGEAVTWQGRKYDVYPVDGCGFEMNGKGAAARPSLKVSNLYGMVTGMVEDLHSLVGATVIRRIVYARFLDAVNFQNGNQEADPEQESVSRWVIEQCSDLTAVSATFVLATPTETDGCVFPGRIMLANTCTWIYRSDECGYTGPAVADEFDNPTADPAKDACSRCARGCALRNNTGNFGGFLSINKLSQ
complement(2740541..2740870)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tip assembly protein; Lambda gpM homolog; STM474_2702; phage(gi169257220)     5.72e-77            SalmonellaentericasubspentericaserovarTyphimuriumstrST474METFNWKIRPDMTVESEPKVTSIKLGDGYEQRRPAGLNNHLAKYNVTVRIRKGEHQNLEAFLSRHGGVKSFLWTPPYTWTQIRVICRKWSINVGSLWVTVTTTFEQVVI
complement(2740873..2743968)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tape measure protein; minor tail protein; Lambda gpH homolog; STM474_2703; phage(gi169257221)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MDQIANLVIDLSIDSAEFRNEVPRIKKLLNDAAGDSERSAARMQRFLDKQTEATRRTSASLDQVTASSTAYSSAVEKSAAASTRLAADVDQTRQRVEALGRKLREEQAQSAAVAAAQDRTSAAFYRQIDSVKQLSGGLQELQRIQAQVRQAKGRGDISQGDYLALVSETARKTRELTDAEALATQKKAQFIRRLKEQTTVQGLSRTELLRVKAAELGVSSAADIYIRKLERTGTATHTLGLKSAAARRELGVLAGELARGNFGALRGSGITLANRAGWIEQLMSPKGMMLGGLAGGVAAAVYGLGKAYYEGAKESETFNKQLILTGSYAGKTTGQLNAMAKSLAGNGVTQHDAAGVLAQVVGSGAFTGQAMAMVSRTATRMQENVGQSVDETIRQFKRLRDDPVNAAKELDRTLHFLTATQLEQIRVLGEQGRVADAAKIAMSAYSEEMNKRMGDVHDNLGWIERAWNAVGDAAKWAWDRMLDIGREDTLDEKIATLQEKIARDRKTPWTVSSSQTEYDQQQLNELQEQKRQKDLLDAKAQAERNYQETQKRRNEQNAALNRDNETESLRHQREVARITAMQYADAAVRNAALERENERHKKALSQQAKKPKTYHNDEARRLLLQYSQQQAQTEGQIAAAKLSTTEKMTEAHKQLLSFQQRIADLSGKKLTADEQSVLAHKDEIALALQKLDISQQDLQHQNALNELKKKTLTLTSQLADEESRVRQQHAMALATMGMGDQQRGRYEERLKIQQHYQEQLEQLKRDSKAKGTYGSDEYRQAEQALKGSLDRRLAEWADYNAKVDAAQGDWTLGASRALDNFLAQGGNVAGMTENVFTNAFNGMADSIANFAVTGKGSFRSLTVSILADLAKMEARIAASKLLGSVLAMFGFGTSAGGSTPSGAYSSAALSVIPNADGGVYRSAGLSQYSGSIVNRPTFFAFAKGAGVMGEAGPEAILPLRRGADGKLGVVAAGSGGMAMFAPEYNIEIHNDAGNGQIGPQALQAVYNIGKKAAIDFWQQQSRDGGIAGGGR
complement(2743940..2744278)       PHAGE_Phage_Gifsy_1_NC_010392: part of bacteriophage tail assembly chaperone gpG by translational frameshifting; Lambda gpT homolog; STM474_2704; phage(gi169257222)     1.52e-77            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MNRELAFVMRLAREFRRPDWRQMLAEMSATELGEWAEHFGKNSFSDMLLDAEFATLKSLISGLVTGTHHDAEMFSLITDPESLHEKTDDELMILGEGITGGVRYGPDSEPGH
complement(2744275..2744670)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail assembly chaperone; Lambda gpG homolog; STM474_2705; phage(gi169257223)     2.16e-93            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MFLNTDTFNYGGHSIVLSELSALQRVDYLKFIQQRTADYDAQPETLTEAERQTEFMQMGVDINAWLVSRSLCESKKEEEARALYESVRLEWSYEALGRGADMVLSLSGMRLPASQEDDSGSEKDTTTPEKS
complement(2744721..2745467)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage major tail subunit; Lambda gpV homolog; STM474_2706; phage(gi169257224)     3.19e-174           SalmonellaentericasubspentericaserovarTyphimuriumstrST474MMGTPNPLVKTKGAGTTFWLYTGSGDAFKNPLADDDWLRLAGIKDLQPGEMSADAEDDDYLDDENADWKSTTQGQKSVGDTTATLAWKPGETGQKKLVELFDTGEVRAFRIRYPNGTVDVFRGWLSSLGKTVTSKEVMTRSVKITGVGRPSLAEEDTPDVVSVSGVTVAPASATVAAGATTTLTFTVKPDNASDKTLQVATADPLIATVTLKDNVATVKGVKAGSVNIVGISSDGSLVAVAAVTVTAS
complement(2745475..2745876)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail shaft stabilization protein; Lambda gpU homolog; STM474_2707; phage(gi169257225)     2.50e-93            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MSKHTLIRRAVLEKLESVTGAPVTLFDGLPAFVEQEDLPAIAVWLTDAQYTGLMTDEDDWQATLHTAVFLRAQAPDTELDIWMEEKIFPALEEVSGLERLIDTMTPLGYDYQRDSEMATWGMAEITYRITYTN
2745865..2747115                   PHAGE_Phage_Gifsy_1_NC_010392: transposase; STM474_2708; phage(gi169257226)          0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MFAHQNASFPPRPEGRGGKEAVFRLTVFCIITFSSLICEAMKRAYKYRFYPTTEQAELLAQTFGCVRFVYNSILRWRTDAYYERKEKIGYLQANARLTALKKEPEFAWLNDVSCVPLQQSLRHQQTAFANFFAGRAAYPAFKSKRHKQAAEFTASAFKYRDGKLYMAKNKIPLDVRWSRPLPSVPSTVTISKDAAGRYFVSCLCEFEPASLPITSSMVGIDVGLKDLFVTDTGFRSGNPRHTAKYAARLALLQRRLSKKAKGSKNRAKAHLKVARLHAKIADCRLDALHKATRKLINDNQVVCVESLKVRNMIRNPSLSKAIADASWGELVRQLRYKGEWAGRSVVAIDQFFPSSKRCSCCGFIMKKMPLDVRKWQCPECGTDHDRDVNAARNIKAAGLAVLAHGEPVNPESLKAA
complement(2747164..2747742)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage head-tail assembly protein; Lambda gpZ homolog; STM474_2709; phage(gi169257227)     9.02e-136           SalmonellaentericasubspentericaserovarTyphimuriumstrST474MKGLENAIRNLNSLDRQMVPRASIWAVNRVAQKAVSVATRKVARETVAGDNQVRGLPLKLVRQRVRLFKAGTDGKRSARIRINRGNLPAIKLGAAQVRMSKRRGKLLYRGSVLKIGPYLFRDAFIQQLANGRWHVMRRVNGKNRYPIDVVKIPLSGPLTQAFESATQSLIDEEIPKQLGYALKQQLRLYLSR
complement(2747770..2748153)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage minor capsid protein; forms tail attachment site on head; Lambda FII homolog; STM474_2710; phage(gi169257228)     5.83e-87            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MSQSENLFDTAISQADDAILRVMGTVATITSGVLAGATLTGVFDDPESVSYAAGGVRIEGDKPTFFVKTSLTVHLKRPDTLTILGDTFWVDRITPAGGDSSIILLGRGTPPTDNRRRTGGMFDCSPA
complement(2748164..2748523)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage accessory DNA packaging protein; Lambda FI homolog; STM474_2711; phage(gi169257229)     6.18e-80            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MATKEENIQRLRELATRLGRDPDVSGSAAELSQRVMEWEEEAEAEHLPAVENDSDESIVPPGIGQRSERVLIRALRTLHICAIDPDSNRELDMVMAGNPARISQHDVDELIAAGLIIEL
complement(2748581..2749609)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage major capsid protein; Lambda gpE homolog; STM474_2712; phage(gi169257230)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MGLFTTRQLLGYTEQKVKFNPLFLSLFFRRTVTFPTQEVMLDKITGKTPIAAYVSPVVGGKVLRNRGGETRVLRPGYVKPKHEVNYAQVVERLPGEDPARLNDPAYRRLRILTDNLKQEEKAIVQVEEMQAVSAVLNGKYTMQGEQFDTVEVDFGRSAGNNIIQATGKKWSEQDRETFDPTYDLDMYCDQASGLINIAVMDGKVWRLLNGFKLFREKLDTRRGSNSQLETAVKDLGAVVSFKGYYGDLAIVVAKTSYVADNGTEKRYLPEGTLVLGNTAAEGIRCYGAIQDSQALAEGIVAATRYPKHWLTVGDPANEYTMTQSAPLMVLPDPDEFVIVTVG
complement(2749664..2750011)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage head decoration protein; Lambda gpD homolog; STM474_2713; phage(gi169257231)     2.18e-78            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MSFTTTIEKRADNRIFAGNDPAHTATGVSGITAATPMLTPLMLDDTTGKLVAWDGQKAGTAVGVLALELDGSENLLTYWKSGTFATESLAWPKSVDAIKQANAFAGSAVSHAALP
complement(2750024..2751520)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage prohead protease; Lambda gpC homolog; STM474_2714; phage(gi169257232)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MQRNLSHIISQATSAPLLLEPAYARVFFCALGRESGINSLHIPGNNESLDQSDMALVTGDFMATGKPQARFYQVVNGIAVLPVTGTLVHKLGGMRPFSGMTGYDGVTARLQQAVSDPEVKGILLDIDSPGGQAAGAFDCADMIYRMREQKPVWALANETACSAAMLLAAACSHRLVTQTSRMGSIGVVMAHTSYAEKLKQEGIDITLIYSGAHKADLTPSQKLPESVYADYQQRMDEARKMFAEKVARYTGLSVDAVMATEAAVYDGQAIITTGLADGMVNAADAIGVMAEAINSNKTGGTMPELSAADAVTQENQRVMGILGCPEARGHEALAQMLAGQPGMSVAQAKSILAAAAPADTTSTADRILALEEAGGRETLAQTLAAMPEMTVEQARTILAASPIAAATSLHDAVMALDEAKGREELAEKLAVMPGMTTDQARDLLAAAPDKSGNAGLSMNNAFDAFMQSHSPGPISGGKGHSNDTETTLLMSIPGTSAT
complement(2751510..2753129)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage portal protein; Lambda gpB homolog; STM474_2715; phage(gi169257233)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MQWSPPGTCGGETVKRTPVLVDVHGTPLRESLGYTGGGIGFGGQMADWMPPAESVDAALLPSLRLGNARADDLVRNNGIAANAVALHKDHIVGHLFLISYRPNWRYLGMRESAAKSFVDEVEAAWTEYCDGIFGEMDAEGKRTFTEFIREGVGVHAFNGEIFLQPVWDAETTQVFRTRFKAVSPKRVDTPGYARGNRQLRAGVETDRNGKALAYHVCDDDWPVAGGERWTRIPRFLPSGRPAMLHIFEPVEDGQTRGANQFYSVMERLKMLDTLQATQLQSAIVKAMYAATIESELDSEKAFEYITAADNKDTPLVNMLANYARYYSTNSIKLGGVKIPHLYPGDELNLQTAQDSDNGFSALEQALLRYIAAGLGVSYEQLSRDYSQVSYSSARASANESWRYFLGRRRFIAGRLATQMFSCWLEEALIRGVIRAPRARFSFWEARSSWSRSEWIGAGRMAIDGLKEVQESVMRIEAGLSTYEKELAIMGEDYQEIFRQQVRESEERRAAGLSRPVWITDTYQQQIAASRQTEEEKRAT
complement(2753087..2753290)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage head-to-tail joining protein; adapter between portal and gpFII; Lambda gpW homolog; STM474_2716; phage(gi169257234)     4.01e-42            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MATITELQEARVALHDLMTGKRVATVQKDGRRVEFTATSVGDLKKYVAELEASLCNGRRRAPVGVRL
complement(2753274..2755205)       PHAGE_Phage_Gifsy_1_NC_010392: DNA packaging protein; large terminase subunit; Lambda gpA homolog; STM474_2717; phage(gi169257235)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MISGERRANNANRAITNGLIALHIPVPLTTVQWADEYYYLPKESSYTPGKWETLPFQVAIMNAMGYELIRVVNLIKSARVGYTKMLLGVEGYFIEHKSRNSLLFQPTDSSAEDFMKSHVEPTIRDVPVLLELAPWFGRKHRDNTLTLKRFSSGVGFWCLGGAAAKNYREKSVDVVCYDELSSFEPDVEKEGSPTLLGDKRIEGSVWPKSIRGSTPKVKGSCQIEKAANESAHFMRFYVPCPHCGEEQYLKFGDGSTPFGLKWEKSKPETVYYLCEHNGCVIRQSELDQKAGRWICDNTGMWTRDGLAYFSASGEEVPPPRSITFHIWTAYSPFTTWIQIIYDWLDALKDPNGVKTFINTTLGEPYEEAVAEKLSHELLLEKVIHYAAPVPERVVYLTAGIDSQRNRYEMYVWGWAPGEEAFLIDKQIIMGRHDDEDTLQRVDAVINKKYRHADGTDISISRICWDIGGIDAEIVYKRSKKHGIFRVLPVKGASVYGKPVITMPKKRNQSGVFLCEIGTDTAKEMLYARMGAVTAPADEATPYAIRFPDNPDVFTEVEAKQLVAEELVEKLVNGKFRLLWDAKGRRNEALDCLVYASAALRVSVQRWQLDLEALATSRKSEEQDTPTLEQLAAMLAGGVNGNNH
complement(2755177..2755722)       PHAGE_Phage_Gifsy_1_NC_010392: DNA packaging protein; small terminase subunit; Lambda Nu1 homolog; STM474_2718; phage(gi169257236)     1.81e-115           SalmonellaentericasubspentericaserovarTyphimuriumstrST474MNVNKKKLAEIFGCDVRTVTAWQSQGLPLVSGGGKGNEAVFDTAAAISWYAERDASIENEKLRKEVDDLRAAAESDLNPGTIDYERYRLTKAQADAQELKNAEREGLVLETELFTYILQRVAQEIAGILSRVPLVLQRKYPDLCQSHIDVVRTEIARASGRAATIADVEKWTDDFRRAQGE
2756009..2756410                   PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; STM474_2719; phage(gi169257237)     6.46e-93            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MKFKSIAKTVFLFALLTSAGFATGKNVNVEFDKGQNSARYSGVIKGYDYDTYNFQARKGQKVHVSISNEGADTYLFGPGISDSVDLSRYSSELDGNGQYTLPASGKYELKVLQTRNEARKNKAKKYSVNIQIK
complement(2756646..2757119)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage lysis protein; Rz; STM474_2720; phage(gi169257238)     3.68e-106           SalmonellaentericasubspentericaserovarTyphimuriumstrST474MMFNWKTMFVGLLLVSLIVAGRLANHYRNNAITYKYQRDTATHNLKLANETITDMTKRQRDVAALDAKYTKELADAQNRNTDLQRRLAAGSRVRVEGRCTVPTTTTTKTASTRRVGNAATVELSPVAGQNVLDIRAGIISDQEKLKYLQEYIRTQCK
complement(2757116..2757580)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage lysin protein; endolysin; STM474_2721; phage(gi169257239)     1.92e-105           SalmonellaentericasubspentericaserovarTyphimuriumstrST474MQGLMMRISEKGITLIKEFEGCSLKAYPDPGTGGDPWTIGYGWTHSVDGKPVKPGMMIDEATAERLLKTGLVGYENDVSRLVKVKLTQGQFDALVSFAYNLGARTLSTSTLLRKLNAGDYAGAADEFLRWNKAGGKVLNGLTRRREAERALFLS
complement(2757552..2757800)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage lysis protein; holin; STM474_2722; phage(gi169257240)     1.94e-52            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MAGLIAYGRLIYDGATRKNKWLEGVLCGALSLCVTSALDVVGLPVSISPFVGGIIGFVGVDKLREIAISALKKRAGVNDENQ
2758157..2758843                   PHAGE_Phage_Gifsy_1_NC_010392: virulence protein GogA; STM474_2723; phage(gi169257241)     6.18e-169           SalmonellaentericasubspentericaserovarTyphimuriumstrST474MPAGIKPIFINNMMSIYGLSHPHDSKVFPDLPEHQDNPSQLRLQHDGLATDDKARLEPMCLAEYLISGPGGMDPDIEIDDDTYDECREVLSRILEDAYTQSGTFRRLMNYAYDQELHDVEQRWLLGAGENFGTTVTDEDLESSEGRKVIALNLDDTDDDSIPECYESNDGPQPFDTTRSFIHEVVHALTHLQDKEDNNPRGPVVEYTNIILKEMGHTSPPRIAYESSN
complement(2759058..2759246)       PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; STM474_2724; phage(gi169257242)     3.22e-40            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MKEGFYWIQHNGRVQVAYYTHGVTEDLETGQTIIGVWHLTQGDDICHNGEAEILAGPLEPPI
complement(2759335..2759411)       tRNA                                                                                 N/A                 CCGCCATTAGCTCAACTGGAAAGAGCACGGAGCTTCTACCTCTGTGGTTCGGGGTTCGAATCCTCGATGGCGGACCA
complement(2759753..2760316)       PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical bacteriophage protein; STM474_2726; phage(gi169257243)     1.69e-135           SalmonellaentericasubspentericaserovarTyphimuriumstrST474MTTQISVETLSPITHNQIPVITTELLAHLYGTKIKNISDNFLNNTTRFVVGKHFFKIEKNELREFKNRPETIGLVGKNARSLILWTERGAARHAKMLETDQAWEVFEKLEDCYFSQTLPSPTRQVQPAVDMLNIDLLIKIRDGNVKDIRQVGPDMFVGKVEQILSGLRDSGWIVIKRDLLAEKLATW
complement(2760589..2761266)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage antiterminator protein Q; STM474_2727; phage(gi169257244)     2.32e-165           SalmonellaentericasubspentericaserovarTyphimuriumstrST474MNTQYLQYVREQLMVATADLSGETKGQLLAWLENAQFDTKNYPRKKQRIWDEETESWITLNNPPIPGKQSLAKGSAIPLVKPVEYSTASWRRAVLSLDEHYKAWLLWNYSENTCWEHQVEITQWGWSAFAAQLDGKKMAGKTQERLRALIWLAAQDVKSELAGREVYQYKELAGLVGVSEKNWSETFTRHWLTMRAIFLRLDQASLLSVSESRSEQVAFNLYALN
complement(2761263..2761403)       PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical bacteriophage protein; STM474_2728; phage(gi169257245)     4.92e-26            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MKPELIEILRMRWQRLRIYRRPGSVLVDYRILRNFVRIYQFTGFTQ
complement(2761400..2762017)       PHAGE_Phage_Gifsy_1_NC_010392: NinG; STM474_2729; phage(gi169257246)                 3.17e-145           SalmonellaentericasubspentericaserovarTyphimuriumstrST474MNMAKLPRRKCANKECRQWFHPIREGQIVCSYQCASAVGKEQTRKAREAAQRKAQSLQRAAEKKERAAWRQRKAAVKPLKHWIDLTQRAVNDICRETELAEGLGCISCGTKTAFAWHAGHYRSTAAAGHLRFTRFNIHLQCDVCNVYKSGNIEAYRAALVERYGEAAVLALENNNTPHCWTVEELKEIRLAALADLRALKKLEAA
complement(2762014..2762223)       PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; STM474_2730; phage(gi169257247)     1.89e-43            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MMAMKYSWFHHHDCTTEQADTLVSDYQKRGIRTEKSLNPDFITWTVSAKLPEYAHRVRTPKSLRQKVWG
complement(2762220..2762822)       PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical bacteriophage protein; STM474_2731; phage(gi169257248)     1.07e-145           SalmonellaentericasubspentericaserovarTyphimuriumstrST474MAHELQLIKQSSGILIPATPETSDILQSKIKLGAVLVAEFRQVRNPAFHRRFFALLNLGFEYWEPTGGAISANERKLVNGYAKFLAAYGGNESALLDAAEQYLEQIANRRVTNGISLCKSFDAYRAWVTVEAGHYDAIQLPDGTLRKHPRSIAFSSMDEVEFQQLYKSALDVLWRWILSRTFRTQREAENAAAQLMSFAG
complement(2762857..2762973)       PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; STM474_2732; phage(gi966201472)     9.91e-22            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MRPLLDDEEVFTPNGFMHFIRRLGYRVTPPSDNMKSTA
complement(2763222..2763455)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage putative DNA damage-inducible protein; DinI homolog; STM474_2733; phage(gi169257250)     1.71e-50            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MRIELVISRTKQLPEGAVPALEKELITRLQNQYENCNLTIRRGSQDGLSIVGAADGDKKRIQSILQETWESADDWFY
complement(2764017..2764298)       PHAGE_Escher_phiV10_NC_007804: hypothetical protein; STM474_2734; phage(gi89152468)     4.97e-61            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MANLQLAVKGEYFDAMIRGEKTEEYRLCNDYWNKRIMFREYDRLIITKGYPKRDDSSRRIDVPYGGYEVKTITHPHFGDEPVKVYAIKVNINC
complement(2764291..2764944)       PHAGE_Entero_UAB_Phi20_NC_031019: hypothetical protein; STM474_2735; phage(gi100055)     3.30e-66            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MTTITKEWLQQTIAEFENTRDDIPFGLDDDDAKILIVLKRALASLERERIRREHAEWSDKTFGDVGPVGPLKHLSKEALEAAADPSDPLEWADMQFLLWDAQRRMGISDEFITRAMIEKLEINKSRQWPEPKDGEPRLHIKEQSAPVIPDGWISCSERMPDEIGRYWCYVEEQNDLGKSHYQWNCSWNGDKWGGEMMSGKVTHWMPLPEPPQEFNRG
complement(2764947..2765417)       PHAGE_Pectob_ZF40_NC_019522: putative methylase; STM474_2736; phage(gi422936660)     8.25e-86            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MAETILDVCCGSRMFWFNKQDSRAVFADIRAEEHTLCDGRRLVISPDLIADFRALPFADSSFPVVVFDPPHLERVGQTAWMGKKYGRLNKKTWRSDLRAGFKEAFRVLRPHGVLIFKWNETQIPVSQILALTDVKPIIGQRTGKNDKTHWIIFVKD
complement(2765419..2766084)       PHAGE_Salmon_epsilon34_NC_011976: EaD-like protein; STM474_2737; phage(gi221328645)     5.49e-32            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MSNIDKQALREAAVAIETVATPQKLLAFRVKVTPQVVLALLDENLQLQREKDAIEAVALALRDDMRQAREQLEAAEKRIAEQREYYEGVIADGSKRIAELERSETQLISERDDAESALNDAYKAVMGQAPEWSNWFSFENAIDEIELACELWRNQTDDVIQFRQRIVELEAKLETADRLQDGAFRDGLKAGFSYGQTDDQSGFAQCMSAYSTRTDIGVKVE
complement(2766099..2766791)       PHAGE_Escher_HK639_NC_016158: replication protein 14; STM474_2738; phage(gi356870655)     7.02e-102           SalmonellaentericasubspentericaserovarTyphimuriumstrST474MKNIAAQMVNFDREQMRRIANNMPEQHDDKPQVEQVAKVINNVFSQLMAAFPATTANRSQAEMNEIRRQWVLAFRENGITTMEQVAAGMRVARRQERPFLPSPGQFVAWCREGSGALGVSVDDIMGEYWRWRKLVFRYPTSEQFPWRDKNPLYYHVCLELRRRGMEGQLSEKELIRAAGDILHEWEKRVLAGKPIPPVRRALAAPSRDRGPTPAEMLMAKYKQRKDAGLI
complement(2766788..2767693)       PHAGE_Salmon_SEN34_NC_028699: replication protein O; STM474_2739; phage(gi966201463)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MANTAKVINFPVPDVAPKEPRVADLDDGYTRLANELLDAVMCSGLPETELCILMAVWRKTYGYNKKMDWISNEQLEEMIQKHHTHCSTAKNSLIRKKVLIQEGRRVGMNIHISEWQTKNNGFCKTLAKPAKKTLAEVANAPKQKLLTTKDKLTKDNIKRSTSENSDESSDKPAKKPHVLKPEAAIQRGNKWGTAEDLTAAEWMFDLIKTISPSARKPNLAGWANDIRLMRECDGRTHRDMCVLFRWACHDSFWAGNVISPAKLREKWTQLDINRNKQQTGTTASKPKLDLNNTDWIYGVEL
complement(2767785..2768195)       PHAGE_Phage_Gifsy_1_NC_010392: probable regulatory protein; transcriptional activator; lambda CII analog; STM474_2740; phage(gi169257256)     1.27e-85            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MSYGLTCIQIQQMHYQAKRRQPNNHRGYLPMENAIARKLDPPEINPIEIESVLLNRLASVGQKSYAEHMGISESTVSRRKAEGYFCNMAKELAFLGIQAAPPEAVLVSRNYLTAVEILADAGLKAERARPDALGWD
2768447..2768833                   PHAGE_Entero_mEp237_NC_019704: prophage repressor; STM474_2741; phage(gi435439304)     6.88e-81            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MMSDNTLTNGLISRLAELNKKGFSKTEMARVAGVSKQAVSSWFKTGRISKSSALAIADAAGVSVPWLLGEDVGEKDGLKPDEQRLLELYRQLPEEEQQNMMRVFSLRLKELDELYAKYMSRRIKGEGA
2768985..2770070                   PHAGE_Pseudo_phi297_NC_016762: putative ParA protein; STM474_2742; phage(gi374531271)     2.46e-76            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MDNGRVEATDRPTEMIASNTKYLVWNNKGGVGKTFLTYNLAVEFAISHPDQDVVVIDACPQSNVSEIILGGNGTGEENLNYLRDRNVTIAGYIKERFSKSPLSRLGNESSYFVRAHTVNSKMPENLYILPGDVDLDICSRLISHIGSSPVKEAWKKSRSLLVDLIASLEADKSISDRAKTFFIDCNPSFASYTELGVVAANRIIIPCTADAASIRGIKNLVKLIYGVSIDKSEQDEMFLDFNKEAIQNLIELPKLHLFVQNRSRTNESDAAKAFKSHAEEIKRITDDLLKTHPHLFTSGNLSERVQNVKDGNTLAAIINHEGCPLSKLQHKSYTIYGMATQANKAQIEALESDVSTVVKCL
2770675..2770791                   PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; STM474_2743; phage(gi169257259)     4.00e-19            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MIDFARKPARQQAVLLNRIEVLIRRLCYLLAQKGDPDA
2770784..2770954                   PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; STM474_2744; phage(gi169257260)     4.57e-14            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MHNQKTCAYHLCGKTIEQGKEVKNELTLIRGAQLTHEERDYCSVRCASYDQMAHES
2771095..2774295                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage exodeoxyribonuclease VIII-like protein; STM474_2745; phage(gi169257262)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MEFFYVVKATQKSGKQDATVWFTAKSEARANLMLDVVLEDAEIETGRGKDYARPIRTNFPVVNELPPEGEISFTFTNYYRLGEDGMTWEQIPGVTLPSSEAAAAARQHIVDGVDTETGEVLEDHTENFGNESNSPAQATAPAPELTVVATMPLRHRVLAQYIGEGEYLYHVDTDQKKEIACLEMDTQNTTAQNLILAAENVEPFKKAIEHDIHKAVNAYKQVFPVDGKVPELCTTIKFFKEWFSAEHINRGLLVKEWAERLKNKPVPVKKTGQHKVIVDDVNKPERPRRSEKPTHRTINYELACGFCEELVLNNLRPAMDFAKRIIAEDREDWKRMSMTVGTIPDIKGYDRQTIIDLVRKAPKAVHNGNPDLRRTWCESFLAVHGVRDPDWYEYVPDNTPTTHEENAARLRQAGKCLRDIESGRFQCDEEKPQPTDELADEPATPETVEQDTTEHHPDPQPLENEPPVSQTEAGYQKIRAELHEARKNIPPKNPVDVGKQLAAARGEYVEGISDPNDPKWVKTETSQPASEPELVKNVGNGIFDVSALMQNSSTHGTETNPETTSNVQVQKADSDEKQAGDAVQAGEGDLGTGKEAVTVENQNQAETHQNNDSVSQSEPEAQQNVPESQQEEPEAAWPEYFEPGRYEGVPNEVYHAANGISSTQVKDARVSLMYFNARHVEKTIVKERSPVLDMGNLVHVLALQPENLEAEFSVEPEIPEGAFTTTATLREFIDAHNASLPALLSADDIKALLEEYNATLPSQMPLGASVDETYASYEQLPEEFQRIENGTKHTATAMKACIKEYNATLPAPVKTSGSRDALLEQLAIINPDLVAQEAQKSSPLKVSGTKADLIQAVKSVNPAVVFADELLDAWRENTEGKVLVTRQQLSTALNIQKALLEHPTAGKLLTHPSRAVEVSYFGIDEETGLEVRVRPDLELDMGGLRIGADLKTISMWNIKQEGLRAKLHREIIDRDYHLSAAMYCETAALDQFFWIFVNKDENYHWVAIIEASTELLELGMLEYRKTMREIANGFDTGEWSAPITEDYTDELNDFDVRRLEALRVQA
2774258..2775415                   PHAGE_Phage_Gifsy_1_NC_010392: RecT; STM474_2746; phage(gi169257263)                 0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MCAALKRCAYRHKGKIMENTNIVTTEQQAPNTISASNAIFNVQALGQLTAFANLMADSQVTVPAHLAGKPADCMAIVMQAMQWGMNPYAVAQKTHLVNGVLGYEAQLVNAVIASSSAIHGRFHYRYGGDWERCTRTQEITRDKNGKNGKYTVTERVRGWTDEDEIGLFVQVGAILRGESEITWGEPLYLSGVVTRNSPLWVSNPKQQIAYLGVKYWARLYCPEVILGVYSPDEVEQREEREINPAPVQRMSVQEITSEVSTRTSAQESAANVDAVADDLRERIDTASSVDQAKAIRADIESQKALLGTALFTELKNKAVKRYYQVDAQNKVEAVINSIPNPGEPEAAEMFAKAESTLGAAKRHLGDELHDKYRVPLDDMKPEYIG
2775458..2775697                   PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; STM474_2747; phage(gi169257264)     1.19e-52            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MRLINRSKQSPLGRRACDVALAAHHEKFGDYGRQKHVTNYTVVVDGVKVPVEVVNRATSYVATAMIGVRKLRNLPAQAN
2775738..2776022                   PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; STM474_2748; phage(gi169257265)     2.53e-64            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MSKKIRDFELMSTREICCQLRISSRTLERYRKRPSDNNPFPEPDCSYMGGSNKWLKTKVNEWQVREMSRPTRRPMSHLNLPRDNKGRLIRSDVA
complement(2776000..2777229)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage integrase protein; STM474_2749; phage(gi169257266)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MAISDSYLKSCLGRERDKVEEKADRDGLWVRISKKGAVTFFYRFRFLGKQDKMTIGSYPEFGLKAAREEVTKWAAILARGENPRIRQSLDKAKINSQYTFEELFREWHAMVCVQKETSDQILRSFELHVFPKLGKYPAHQLTLHNWLTVLDRLAQGYTEITRRVISNGRQCYSWAVKRQLLEVNPLSEMSGRDFGIQKKMGERTLDRKEIAIVWRAIEDSRLIERNKILYKLSLIWACRVGELRQAEVSHFDFEEGVWTVPWENHKTGRKSKKPIIRPIIPEMLPLIQRAIELAPGRFVFSKYADKPMSEGFHMSISSNLVKFMLKAYNEQVPHFTIHDLRRTARTNFSELTEPHIAEMMLGHKLPGVWSVYDKYTYIEEMREAYSKWWARLMSIIEPDVLEFTPRQTG
2777303..2777314                   attR                                                                                 N/A                 ACAAAAACCATG
complement(2777727..2778206)       SoxR reducing system protein RseC; STM474_2750                                       N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MIKEWATVVSWQNGQAVVSCDVKASCSSCASRAGCGSRVLNKLGPQTTHTIVVPSAEPLAPGQKVELGIAEKSLLGSALLVYMSPLAGLFLCAALFQMLFGSDLAALSGAVLGGVGGFLVARGYSRKLAERDAWQPVILNVALPPDLVRVETTSIETRQ
complement(2778203..2779159)       periplasmic negative regulator of sigmaE; STM474_2751                                N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MKQLWFAMSLVAASLFFSANASADPASGALLQQMNIASQSLNYELSFVSITKQGVESLRYRHARLDGRPLAQLLQLDGPRREVVQRGNEISYFEPGLEPFTLNGDYIVDSLPSLIYTDFKRLAPYYDFISVGRTRIADRLCEVIRVVARDGTRYSYIVWMDMDTKLPMRVDLLDRDGETLEQFRVIAFTVSQDIGSNMQALAKANLPPLLSVPGGEKTKFNWSPSWVPQGFSEVSSSRRPLPTMDNLPIESRLYSDGLFSFSVNVNRATQNSSDQMLRTGRRTVYSSVRDNAEITIVGELPPQTAKRIADSIKFRAVQ
complement(2779159..2779875)       anti-RNA polymerase sigma factor SigE; STM474_2752                                   N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MIIKFNRLSGVDDSGILEKVLGMQKEKLSALMDGETLDSELLKALTHDPEMQKTWESYHLIRDSMRGDTPDVLHFDISARVMAAIENEPVRQVSPLIPEAQPAPQQWQKMPFWKKVRPWAAQLTQMGVAACVSLAVIVGVQHYNGQSETSQQPETPVFNTLPMMGKASPVSLGVPSEAAPVGSQQQQVQEQRRRINAMLQDYELQRRLHSEQLQFEQAQTQQAAVQVPGIQTLGTQSQ
complement(2779841..2780416)       PHAGE_Rhizob_vB_RleM_P10VF_NC_025429: RNA polymerase sigma-70 factor; STM474_2753; phage(gi712913000)     1.31e-09            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MSEQLTDQVLVERVQKGDQKAFNLLVVRYQHKVASLVSRYVPSGDVPDVVQESFIKAYRALDSFRGDSAFYTWLYRIAVNTAKNYLVAQGRRPPSSDVDAIEAENFESGGALKEISNPENLMLSEELRQIVFRTIESLPEDLRMAITLRELDGLSYEEIAAIMDCPVGTVRSRIFRAREAIDNKVQPLIRR

#### region 6 ####
2798908..2798921                   attL                                                                                 N/A                 CGCTGCCGCAGCTT
complement(2811888..2812958)       PHAGE_Shigel_Shf125875_NC_025437: AroG; STM474_2783; phage(gi725950020)              1.17e-117           SalmonellaentericasubspentericaserovarTyphimuriumstrST474MQKDALNNVRITDEQVLMTPEQLKAAFPLSLAQEAQIAQSRGIISDIIAGRDPRLLVVCGPCSIHDPETALEYARRFKALAAEVSDSLYLVMRVYFEKPRTTVGWKGLINDPHMDGSFDVEAGLKIARQLLVELVNMGLPLATEALDPNSPQYLGDLFSWSAIGARTTESQTHREMASGLSMPVGFKNGTDGSLATAINAMRAAAQPHRFVGINQAGQVALLQTQGNPHGHVILRGGKAPNYSPADVAQCEKEMEQAGLRPSLMVDCSHGNSNKDYRRQPAVAESVVAQIKDGNRSIIGLMIESNIHEGNQSSEQPRSEMKYGVSVTDACISWEMTDALLREIHKDLSGQLAVRVA
2813398..2813916                   putative periplasmic protein; STM474_2784                                            N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MRFSHRFILLLSLLLASLPLYAQRVTEEEKSVRAIVSGIVSYTHWPALSGPPRLCIFSSARFVRVLSEEADWAFPYQPLVIRTTQEALSARCDGFYFGNESPAYQVELTRHYPVNALLLIAEQNTECIIGSAFCLIINNDEVKFSVNLDSLSHSGVRVNPEVLMLARNQKHE
2813909..2815129                   PHAGE_Bacill_G_NC_023719: gp350; STM474_2785; phage(gi593777806)                     2.36e-16            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MNKEFSLSRPTFKRTLRRISIISVLLTMTLIWLLICVASVLTLKQYAQKNLDLTAATMAHSLEAALVFSDNAAAAETLATLGRQGQFSAAEVRDKNGRTIASWRYDARAADDKLIGLISHWLFPLPVSQPVWHNGRAIGEVRLVARDSLIGHFIWLSLAVLTGCILLASGIALLLTRYLHNGVVDALQNITEVVHDVRTNRNFSRRVPDERIAEFHLFAQDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSCINALMKDNSARSSSALLFLDGDNFKYINDTWGHAAGDRVLIEVAKRLAEFGGSRYQTYRLGGDEFAMVLYDVHSEYEVQRICAALSQAFNRPFELHNGQRITMTLSIGFALTWEHATAEKLQELADRNMYQAKHRRAERSLN
complement(2815382..2816431)       PHAGE_Salmon_SEN1_NC_029003: integrase; STM474_2786; phage(gi971764936)              0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MTVSKQKSGKWLCELYPNGREGRRIRRQFNTKGEAEAFEAFTKSESEDKPWLGKKEDRRRLSEIIQLWHNLHGQALVASKSRLAKLQIVCNGLGDPIASRLTAKDWAHYRDRRLRGEIDNGYHKDPAKWIAKPITVNREQQYLEAVFNELRRLGEWSLPNPLDGIRVFKEAEKEMSWLTLSQLAELFRACEQYGKENLTMIVKVCLATGARWGEAERLTRPQLSPYKLTFTKTKGKKNRTVPIPKWLYDELSERQGRMFKPCYQEFKKMLKLTNIELTEGQKTHVLRHTFGAHFMMNGGNILVLQKILGHANIRETMKYAHFAPDHLEQAVTLNPLSLYVGDNMAAEVA
complement(2816803..2817798)       PHAGE_Salmon_SEN1_NC_029003: repressor; STM474_2787; phage(gi971764938)              1.11e-140           SalmonellaentericasubspentericaserovarTyphimuriumstrST474MRHAAGLILHLTYRIISCCLKCSAVVCILVDEHQYRSLNFCCKQNFCWCDMAKNDVDAPAALERVLSAYGFKQQKELAERLGIHANNVSSWLARNVIPSNVFVECALDTGADLRWLVNGELANAKLDVGQVNLKGKQLYDEIMANGGRAVLRRILDAYGFTMQKELGDLLGISSGTISTWVRRDFFPGDVVVTCALDTGVSLGWLSTGKGQMRNSKDGEPSNALTIRKCRLEAGELKDIGHWTPDVSMVPANTDDLVFIDGVSVSWLVDCSSSKIGNGRWLIGIDGALDVFDVIRLPGGKVRLSNKSAEFECNITDITPAGAVIFTLEKHV
2817762..2818115                   PHAGE_Salmon_SEN1_NC_029003: hypothetical protein; STM474_2788; phage(gi971764939)     3.77e-63            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MSDAKSIPLHDAQNLQNQTVLLDAGQFNALVTMMQLSMQNMIRTAMLDTMSVKDFAAARGVSERLVWQWIDEGVLLKAPTKDVTSKEKAAKRSRTLINVKAWRDKLTQQAIDCRYIN
2818238..2818675                   PHAGE_Salmon_SEN1_NC_029003: regulatory protein CII; STM474_2789; phage(gi971764940)     9.39e-84            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MKELANKAAIKPHTLYNKLNPEQPHQLTPREIWTLTDLTEDSTLVDGFLAQIHCLPCVPVNELAKEKLQSYVMHAMSELGELASGAVSGDRLTPAKKQNMIASVNAGIRMLSLSAMALHARLQTNPAMSSVVDTMSGIGASFGLI
2818737..2818883                   PHAGE_Salmon_SEN1_NC_029003: hypothetical protein; STM474_2790; phage(gi971764941)     5.93e-12            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MHYGHGWIAGKDGKRWHPCRSQDDLLADLSTKKQGKSWLSKLFPRLFR
2818847..2819185                   PHAGE_Salmon_RE_2010_NC_019488: hypothetical protein; STM474_2791; phage(gi418489688)     1.79e-49            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MAIEAVSETVPLKAGERLAGLNHVAELRARYWGDSWKEVERFVDDMRDKRDSQFEENNRALAAIFFLAKIPAARHELELSELTTDEKKALITAMNHFRAVVSLFPKRLTMPN
2819253..2819480                   PHAGE_Salmon_SEN1_NC_029003: hypothetical protein; STM474_2792; phage(gi971764943)     1.39e-45            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MRNTEIRSFNTDSDALAVLLIDAKKEERKDRALAVSIRLEALAIHITKEGMSGTEAAELLRREATRFENESQELH
2819480..2819704                   PHAGE_Salmon_SEN1_NC_029003: putative zinc-finger containing protein; STM474_2793; phage(gi971764944)     3.81e-43            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MADAIDLAQQREQEDRERHISNARSRIAAPSRFLCEECDAPIPEARRAAIPGVAFCVTCQQIAELKLKHYRGAI
2820345..2823074                   PHAGE_Salmon_SEN1_NC_029003: replication protein; STM474_2794; phage(gi971764947)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MGEIDYAFVWNFPKQAIASPYLTYDQQHRRDRMLAALLHARKVLSLQPECVRFDVYRTAAVLEKNQGSQRANAFLISFCKRVLPRLELVAKKYECAGINSNVSAAVFGSHFDTELMQYLASRMVNMVARYNRLPDMSRADIDLLAADIANFIRAELADIDDTGFSELKTLYTWYMRAGFISLQFNVTPPHWERVTKKYVGEDEIAPAIARMFNDVWWRGRLRRIAAAWREHLQITVGNVSKKKHAYASKNCVTDWREQKRRTREFLKGLDLEDEDGNRISLIEKFDGSVANPAIRRCELMTRIRGFENICNELGYVGEFYTLTAPSKYHATTKAGYRNSKWNGASPSDTQNYLTGLWARIRAKLHREEIRIFGIRVAEPHHDGTPHWHMLMFMLPEDVERVRLIIRDYAWEEDRHELKSDKAKKARFHAEAIDPEKGSATGYVAKYISKNIDGYALDGETDDESGELLKETAPAVSAWAARWHIRQFQFIGGAPVTVYRELRRLADTEAAHGLSVEFAAVHDAADAGDWAGYVNAQGGPFVRRDDLQVRTLYEPRTEFNQYGEETVCIRGVYDSAIGAGTPILTRLTQWKIVPKRAVDLAVDVKGAPAPSRTATRYVLKLDDWIKDNKKLAETIGIIAGGALALIGIIGGIGLVAWPVVMGINAIIAAAGVLGTVFTVTGGAIVTALGAITWPIVAVGAAVVAGALLIRKYWEPISAFFSGVIEGIMSAFAPVGEMFAPLAPIFDGLGEKLRGVWQWFKDLIAPVKATQETLDSCKNVGVIFGQALADALMLPLNIFNKLRGGLDLILEKLGLVKKESSSIDKETAQVPPVGQGGGYIPTTSSLGGYRAYQPVTAPAGRTYIDQSSPTYQITLLGGGAPGGQLGNQLQDALEKYERDKRAKARASMMHD
2823088..2823573                   PHAGE_Salmon_SEN1_NC_029003: tail protein; STM474_2795; phage(gi971764934)           6.86e-105           SalmonellaentericasubspentericaserovarTyphimuriumstrST474MMLALGMFVFERRTLPYQSMQHSKDYRWVSNDRVGKPPAYQFLGEGETSIQLAGTLYPAITGGRISLRAVELMADEGRAWPLIEGTGNILGMYIVDKVSTTHTEFFSDGAARKIDFTLSLKRVDESLAAMFGDLNKQASDLLGTAGKLTDKLQGMFGGLTA
2823570..2824736                   PHAGE_Salmon_SEN1_NC_029003: late control D protein; STM474_2796; phage(gi971764935)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MMTGMTIDAGASLAPAFMLTLNSQDITSNFSDRLISLTMTDNRGFEADQLDIELDDTDGKVELPLRGAVLTLWLGWQGSALLNKGDFTVDEIEHRGAPDTLTIRARSADFRGTLNSRREESWHDTTIGELVSAIAKRNKLTASVADSLKKIPVPHIDQSQESDAVFLTRLAERNGATVSVKAGKLLFLKAGSAVTASGKPVPQMTLTRSDGDRHQFAIADRGAYTGVTAKWLHTKDPKPQKQKVTLKRKPKEKHLRALEHPKAKPISKKTKAQKEQEAREGEYMAGEADNVLALTTVYASKAQAMRAAQAKWDKLQRGVAEFSITLALGRADLFPETPVCVSGFKRVIDEQSWLISKVTHNLNNSGFTTGLELEVKLSDVGYESLLEN
2835413..2835426                   attR                                                                                 N/A                 CGCTGCCGCAGCTT

#### region 7 ####
2838219..2838230                   attL                                                                                 N/A                 TCGAAAATATAT
2851713..2853893                   PHAGE_Bacill_SPbeta_NC_001884: ABC transporter; STM474_2814; phage(gi9630145)        6.06e-25            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MTRAAPDVEEVLSERALSQWAQAISYVAGHYRVACSPGSIQANAPWLRGKSRTTALTQLARQAGLSFHAPDIDKTAFSQWRLPLVVELRDGQLLVIEHVNGEEAVDVFVIEEEGQRNRLTLSELLPEILYVAALRPLSALKDSRVDRYISRFKPDWMRELVLQDIRPYLPVMVAAFLINVLSLAGIVFSMQVYDRVIPAQSYPTLYVLSFGVLVAVLFGFLLREARTHIMDVLGKRADMRISDRVFGHALRLRNSAIPRSTGSFISQLRELEQIREMITSSTLATIVDLPFFFLFMIVLAIIAPPLAWIAPVAALLMILPGVALQKKLAVLANQAAHEATLRNAVLVESVQGLEDIKLMQAENRFLQQWNSYIRITGESGLRTRKLTQGLISWGMSVQSLVYAAVIMFGAPMVIEGSMTTGAVVAASMLGSRMIAPMANLCGVLARWQQVKAAKMGLDNIMQLPTETQHDDSLIHRDILHGHYLFENAQFRYHNDDQRIPLRLVRLEIMPGERIAILGRNGAGKSTLLQAMAGGLEMIQGDARLDNLSLSHIDMADLRRNIGFLSQNARLFFGTLRENLTLGAPHANDEQIFDALEVSGGAVFVRRLAKGLDHPIMEGGNGLSGGQRQSLLLARMLLRSPNIVLLDEPSASLDEHTEREFIQRLHQWLGNRTLVVATHRVPILELVERVVVLKEGQLVMDAPKAQALNADRMQSHRREWKNENQSA
2853874..2855064                   type I secretion membrane fusion protein, HlyD family; STM474_2815                   N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MKINQHDAAMDDPDIQRERAFSGAGRIVLICSLLFLILGIWAWFGRLDEVSTGNGKVIPSSREQVLQSLDGGILAQLTVREGDRVQANQIVARLDPTRLASNVGESAAKYRASLASSARLTAEVNDLPLAFPAELNGWPDLIAAETRLYKSRRAQLADTEAELRDALASVNKELAITQRLEKSGAASHVEVLRLQRQKSDLGLKITDLRSQYYVQAREALSKANAEVDMLSAILKGREDSVTRLTVRSPVRGIVKNIQVTTIGGVIPPNGEMMEIVPVDDRLLIETRLSPRDIAFIHPGQRALVKITAYDYAIYGGLDGVVETISPDTIQDKVKPEIFYYRVFIRTHQDYLQNKSGRRFSIVPGMIATVDIKTGEKTIVDYLIKPFNRAKEALRER
2855136..2855498                   tRNA                                                                                 N/A                 GGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGTGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAAATAGTCGCAAACGACGAAACCTACGCTTTAGCAGCTTAATAACCTGCTTAGAGCCCTCTCTCCCTAGCCTCCGCTCTTAGGACGGGGATCAAGAGAGGTCAAACCCAAAAGAGATCGCGCGGATGCCCTGCCTGGGGTTGAAGCGTTAAAACGAATCAGGCTAGTCTGGTAGTGGCGTGTCCGTCCGCAGGTGCCAGGCGAATGTAAAGACTGACTAAGCATGTAGTACCGAGGATGTAGGAATTTCGGACGCGGGTTCAACTCCCGCCAGCTCCACCA
2855454..2855501                   attL                                                                                 N/A                 ATGTAGGAATTTCGGACGCGGGTTCAACTCCCGCCAGCTCCACCAAAT
2855546..2855689                   PHAGE_Salmon_RE_2010_NC_019488: hypothetical protein; STM474_2816; phage(gi418489728)     7.82e-28            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MAAKWRQRVGLAATKNPPLKRVLFRNSCGLDHLFPDVVAQKKLDSVL
complement(2855616..2855834)       PHAGE_Salmon_Fels_2_NC_010463: P2 gpOgr-like protein (acttivation of late gene expression); STM474_2817; phage(gi169936018)     2.03e-48            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MMNCPECGHAAHTRSSFQVSATTKERYNQCQNINCGCTFVTHETFVRHIIKPNLISSAPPHPGKGGQGHMSF
complement(2855903..2857003)       PHAGE_Salmon_Fels_2_NC_010463: tail protein; STM474_2818; phage(gi169936019)         0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MNFNSDLLNLNSKSPAFSITIEGKDVTTVMDARLMSLTLTDNRGFEADQLDLELDDADGQIVLPRRGAVIHLALGWKGQPLFPKGAFTVDEIEHSGAPDRLTIRARSADFRETLNTRREKSWHQTTVGEVVKEIAARHNLKVALGQDLTDKALDHMDQTNESDASFLMKLARQYGAIASVKDGNLLFIRQGQGRTASGKPLPVITITRKAGDGHRFTLADRGAYTGVIASWLHTREPRKKETTSVKRRRKKATTPKEPEAKQGDYLVGTDENVLVLNRTYANRSNAERAAKMQWERLQRGVASFSLQLAEGRADLYTEMPVKVTGFKQPIDDAEWTITTLTHSVSPDNGFTTSMELEVKIDGLEIE
complement(2857000..2857485)       PHAGE_Salmon_Fels_2_NC_010463: P2 gpU-like tail protein; STM474_2819; phage(gi169936020)     1.84e-114           SalmonellaentericasubspentericaserovarTyphimuriumstrST474MMMVLGLYVFMLRTVPYQELQYQRSWRHTANSRVNRRPSTQFLGPDNDSLTLSGVLLPEVTGGRLSLLALEQMAELGKAWPLIEGSGTIYGMFVIESLSQTKTEFFASGMPRRIEFTITLKRVDESLSDMFGSLSDQLSNLQDSAASAIGGIKNTVGGLLQ
complement(2857482..2860289)       PHAGE_Salmon_Fels_2_NC_010463: P2 gpT-like tail protein; STM474_2820; phage(gi169936021)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MSDNNLRLQVILNAVDKLTRPFRSAQASSKELAAAIQQSRARLKELDAQAGRIDGFRKASAQLAVTGNSLKAAREEAAKLATQFSATNRPTAAQARLLEQAKNRVTELQSKYNGLRQSVQRQRLALNEAGLDTKKLSSAQRELRQNADETRQALDRQQKSLKRLGEQQARMNAVRDQYSRRLEVRDRIAGAGATTTAAGVAMGAPVVAAVKSYASMEDAMKGVAKQVNGLRDDNGNRTKQFYDMQDAIKAASEQLPMENGAIDYAALVEGGARMGVTNQDDPYEEQKRDLLAFASTAAKAATAFELPADELAEGLGKIAQLYKVPTRNIEQLGDALNYLDDNAMSKGGDIINVLQRMGGVADRLDFRKAAALGSTFLSLGAAPEIAASASNAMVRELSIATMQSKRFFEGMNLLQLNPAEIEKQMTTDAMGTIQRVLEKVNNLPQDKRLSAMTMIFGKEFGDDAAKLANNLPELQRQLKLTSGSGANGSMQKESDINKDSLSAQWLLVKTGAQNAFSSLGETLRQPLMDIMGMVKRVTGALRRWVEQNPVLAGTLMKVAAATAAITVGLGALAVAVAAVLGPLAVIRFGLSMLSVKALPSAAAAATRTGSVLRLLISGPLALLRVALFAVGSLLGALLSPVGLVVAALAGVALVIWKYWQPISAFLGGVVEGFKAAAAPISAAFEPLRPVFQWIGDRVQALWGWFNDLLTPVKSTAEELNSAAAMGRRFGEALAEGLNMVMHPLESLKSGVSWLLEKLGIVSKEAAKAKLPAQVTQQQSATVNSDGKVVLPPGGFPAYAGMYDTGGIIPRGQFGIVGENGPEIVNGPANVTSRRRTAALASVVAGVMGVAATPAEVAPLHPFSLPARTYQTQPVKADSPPSVIRYEINAPIHIVAQPGQSAQDIAREVARQLDERERRARAKARSNFSDQGGYES
complement(2860282..2860401)       PHAGE_Salmon_Fels_2_NC_010463: P2 gpE-like protein; STM474_2821; phage(gi169936022)     1.17e-20            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MADIATIFHWSPSITDVMPLTEVLAWRHKAIQRSGASDE
complement(2860416..2860718)       PHAGE_Salmon_Fels_2_NC_010463: P2 gpE-like tail protein; STM474_2822; phage(gi169936023)     5.40e-63            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MSDKLTEKTVELDTPIMRGKAEITEIVLRKPQSGALRGTRLQAIMDMDVGAMMTVIPRISTPTLTAQEMAELDPADLTALSVEVVTFLLKKSVLAGLPTA
complement(2860773..2861288)       PHAGE_Salmon_Fels_2_NC_010463: major tail tube protein; STM474_2823; phage(gi169936024)     4.07e-122           SalmonellaentericasubspentericaserovarTyphimuriumstrST474MALPRKLKHLNLFNDGNNWQGIVESLTLPKFTRKFEKYRGGGMPGAVDVDMGLDDGALDTEFSIGGTELLLFKQMGKATVDGIQLRFTGSIQRDDTGEVQAVELVVRGRHKEVDSGEWKTGESSSTKVSSTNSYAKLTINGEVLYEVDLVNMVEIVGGVDLMEAHRNALGL
complement(2861298..2862470)       PHAGE_Salmon_Fels_2_NC_010463: major tail sheath protein; STM474_2824; phage(gi169936025)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MAQDYHHGVRVVEINEGTRPITTLSTAIVGMVCTGDDADASVFPLNKPVLLTDVLTASGKAGESGTLARSLDAIADQAKPVTVVVRVAQGETEAETTSNIIGGVTSDGKKTGMKALLSAQSQLGVKPRILGVPGHDTQAVATELLGVAQSLRGFAYLAANGCKTVEEAIAYRENFSQREGMLIWPDFINFDTVLKADATAYASARALGLRAKIDEQIGWHKTLSNVGVNGVTGISADVFWDLQDPATDAGLLNKNDVTTLIRKDGFRFWGSRCLSDDPLFAFENYTRTAQVLADTMAEAHMWAVDGVLNPSLARDIIEGLRAKMRSLVNQGYLIGGDCWLDESVNDKDALKAGKLTIDYDYTPVPPLENLMLRQRITDRYLVDFASRVAA
complement(2862587..2862790)       PHAGE_Salmon_Fels_2_NC_010463: DNA-invertase; STM474_2825; phage(gi169936026)        5.89e-29            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MECELIVERTSAGLEVVRSKGRIGGRRPKLTPEQWEQAGRLLAAGETRHRVGLLFDVSIPLFTRNSL
2863004..2863726                   invasion-associated secreted protein; STM474_2826                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MTKITLSPQNFRIQKQETTLLKEKSTEKNSLAKSILAVKNHFIELRSKLSERFISHKNTESSATHFHRGSASEGRAVLTNKVVKDFMLQTLNDIDIRGSASKDPAYASQTREAILSAVYSKNKDQCCNLLISKGINIAPFLQEIGEAAKNAGLPGTTKNDVFTPSGAGANPFITPLISSANSKYPRMFINQHQQASFKIYAEKIIMTEVAPLFNECAMPTPQQFQLILENIANKYIQNTP
complement(2863923..2864330)       PHAGE_Salmon_Fels_2_NC_010463: P2 gpG-like protein; STM474_2827; phage(gi169936028)     4.36e-84            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MSDYYYSFKEKGFFWQPDTESDNYPDDLIPLTDEYYRELMQGQVDGKYIEHRKGGPVLVEHREYTPEELVAQAEARKAELLAEAESVIAPLARAVKLKIATDEEIKRLEAWELYSVMVNRVDTANPDWPEKPAQI
complement(2864337..2865956)       PHAGE_Salmon_Fels_2_NC_010463: P2 gpH-like protein; STM474_2828; phage(gi169936030)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MSAKFYTLLTDIGAAKLASATALGIPLKITHMAVGDGGGVLPTPSAQQTALVAERRRAALNMLYIDPQNNSQIIAEQVIPETEGGWWIREVGLFDETGALIAVGNCPESYKPQLTEGSGRTQTVRMVLITSSTDNITLKIDPAVVLATRKYVDDKALELKVYVDDLMAKHLAAPDPHSQYAQKDSPTLTGIPKVPTPAAGNSTKQIANTEFVASSIAAMVDSAPAALDTLNELAAALGNDPNFATTMLNALGGKQPLDNTLTNLSGKDVAGLLAYLCLGETINRAADALQKSQNGADIPDKPRFVQNIGLKETLNPTKRVSIGNIGTGVFDGSTPCINIGDSDSGFIGSADGVLDIYCNGAKVGYINGNGLHMLTDIHFDNARMTTNGDIFSSVWGDNWLSIWITNQLNTRGTIDWINSELAIRDNNINTRATIDYVNQTFARKNTGSIQDWGWILDDSTGFIMQWGTLGNSNGTYNFPRAFPVGCFAVFVTNTNAQGTQVDNAFGYPVSNSQFFAATKSSAIANMVNNFPVAWFAIGR
complement(2865953..2866558)       PHAGE_Salmon_Fels_2_NC_010463: P2 gpI-like baseplate assembly protein; STM474_2829; phage(gi169936031)     4.74e-145           SalmonellaentericasubspentericaserovarTyphimuriumstrST474MNSLLPPGSSPLERRLAQTCSGISDLQVSLRDLWNPATCPIRFLPYLAWALSVDRWDESWTENVKRRVVQDAFYIHQHKGTISAVRRVVEPFGFLIRIIEWWQTGETPGTFRLDIGVQDHGITEDTYLELERLISDAKPCSRHMTGMSINMQTSGPYWVGAASYLGEEITVYPYINETIVSGGTAYEGGAVHVIDTMRVNP
complement(2866551..2867459)       PHAGE_Salmon_Fels_2_NC_010463: baseplate assembly protein; STM474_2830; phage(gi169936032)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MAVIDLSRLPPPQIVDVPDFETLLAERKAAFVALYPVDEQDAVRRTLALESEPVTKLLQESTYREILLRQRINEAAQAVMVAYSMGNDLEQLAANCNVKRLTVVPADNDAVPPVAAVMEDDEALRQRIPAAFEGLSVAGPTGAYEFHARSADGRVADASATSPAPAEVVLTVLSREGDGTAVKDLLDVVEKALNSESVRPVADRLTVRSAEIIPYRVEATIFLYPGPEAEPVMAAAKASLQKYIASQTRLGRDIRRSAIYAALHVEGVQRVELTSPLEDVVLDKTQAASCTEWSVTNGGTDE
complement(2867446..2867805)       PHAGE_Salmon_Fels_2_NC_010463: baseplate wedge subunit; STM474_2831; phage(gi169936033)     8.03e-79            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MTLYIGMSRNDGQVIADTDHLRQSVRDILLTPQGSRLARREYGSLLSALIDQPQNPALRLQIMSAVYVALNRWEPRLTLDSITINGNFDGSMVVELMGHSNNGAPVSLSISTGADNGSH
complement(2867802..2868380)       PHAGE_Salmon_Fels_2_NC_010463: P2 gpV-like protein; STM474_2832; phage(gi169936034)     1.49e-137           SalmonellaentericasubspentericaserovarTyphimuriumstrST474MNAQLTEIMRLITNLIRTGTVTEVDRENWLCRVKVGSLETNWINWLTLRAGGARTWWCPSPDEQVVVLSMGGNLETAFVLPAIYSNQFAPPSDSVDGCVTEYPDGGWFEYEPATGRWHVRGIKSMVIEAADNITLKTGEFVVEADTTRINSEVVINGGVTQGGGAMSSNGVVMDKHGHTGVKSGGDTSGGPV
complement(2868449..2868895)       PHAGE_Salmon_Fels_2_NC_010463: P2 gpS-like tail completion protein; STM474_2833; phage(gi169936035)     1.27e-98            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MDELQKVDDWLTALLANLEPAARNRMMRQLAQELRRAQQQNIRMQRNPDGSSYEPRRVTARSKKGRIKRQMFAKLRTAKYLKTAASADSASVQFEGKVQRIARVHHYGLRDRVSRKGPEVRYAERRLLGVNDEVETITRDTLLRWLAG
complement(2868888..2869319)       PHAGE_Salmon_Fels_2_NC_010463: P2 gpR-like tail completion protein; STM474_2834; phage(gi169936036)     4.66e-99            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MNKPQSLRSALNKAVAYVRDNPDKLHLFVDNGSMVATGASSMSWEYRYTLNVVIEDFSGDQNLLMAPVLLWLSDNQPDAINNPELREKLFTFEVDILRNDVCDISMNLQLTERVLVSTDGSVSSVEAVPEPDEPEEMWTVKRG
complement(2869282..2869566)       PHAGE_Salmon_Fels_2_NC_010463: P2 LysC-like protein; STM474_2835; phage(gi169936037)     1.15e-61            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MRICAAGLILLCLLTLSGCGSVRPSPEVQLTVSGCPRVTQCRLERSAPRSNGDLNAVLDETEAAWAVCADKVDTIIACQERDSEQTAVLTQRPE
complement(2869415..2869843)       PHAGE_Salmon_Fels_2_NC_010463: P2 LysB-like protein; STM474_2836; phage(gi169936038)     4.16e-97            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MNRLLAVVLALVLAALGWQSWRLNNASHTIETQGAVLKSKTQELTKKNSQLIGLSILTETNSREQARLYAAAEQTTALLRSRQHRIEELKRENEDLRRWADTPLPADIIRLRERPALAGGAAYREWLSQSDAVPSGKVSAAQ
complement(2869840..2870214)       PHAGE_Salmon_Fels_2_NC_010463: hypothetical protein; STM474_2837; phage(gi169936040)     3.41e-37            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MKWLKSYWLPFSVLALLVMVDVNFPASHALFPLALVMWFEYAAFSLVCCAGLYSCTLTGGDRLRVRQLLSRVLGLMDKVPLTWYQRLALAFVMLLAGWKLTGMVCVFTVAMSLAIKDELKALRE
complement(2870219..2870728)       PHAGE_Salmon_Fels_2_NC_010463: endolysin; STM474_2838; phage(gi169936041)            2.83e-113           SalmonellaentericasubspentericaserovarTyphimuriumstrST474MNPSIVKRCLVGAVLAIAATLPGFQSLHTSVEGLKLIADYEGCRLQPYQCSAGVWTDGIGNTSGVVPGKTITERQAAQGLITNVLRVERALDKCVVQPMPQKVYDAVVSFAFNVGTGNACSSTLVKLLNQRRWADACHQLPRWVYVKGVFNQGLDNRRAREMAWCLKGV
complement(2870709..2870924)       PHAGE_Salmon_Fels_2_NC_010463: lysis protein; STM474_2839; phage(gi169936042)        1.18e-45            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MTLERISAFITYCIAVLLAWLGDLSLKDASTVGGVLIGVLMLAINWYYKHQSFKLLRGGKISRGEYESFNR
complement(2870928..2871131)       PHAGE_Salmon_Fels_2_NC_010463: P2 gpX-like tail protein; STM474_2840; phage(gi169936043)     2.33e-42            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MKVRAHQYDTVDALCWRHYGRTQGVTEQVLQANLGLAEYGPFLPHGLQVELPDITASTTAQTVQLWD
complement(2871131..2871658)       PHAGE_Salmon_Fels_2_NC_010463: P2 gpL-like protein; STM474_2841; phage(gi169936044)     1.71e-112           SalmonellaentericasubspentericaserovarTyphimuriumstrST474MAKGTATSKFRPPPTYSGESRMKFVAPEQAPEQAEVIKNTPFWPDVDLSEFRSVMRTDGTVTQPRLKQVVLTAISEVNAELYDFRNRQQMLGWRTLAEVPAEMLDGKSERIRHYHNAVFCWARAVLNERYQDYDATASGVKRGEELAEASGDLWRDARWAISRVQDVPHCTVELI
complement(2871689..2872342)       PHAGE_Salmon_Fels_2_NC_010463: terminase endonuclease subunit; STM474_2842; phage(gi169936045)     1.83e-155           SalmonellaentericasubspentericaserovarTyphimuriumstrST474MSLSPARQHRLRIQAEQAAREGGSVRRHASGYDLMLLQLAEDRRRLKGIQSTVKKAEIKVELLPKYSAWAEGVLAAGGAQQDDVLMYVMLWRIDAGDYAGALEIGRHALRHGWVMPLGNRNVQTVLAEEMADAAQSALLAAAGFDADLLLQTLDLTTDLDMPDQSRARLHKAIGAVLSESNPASALNHLTHALQLDPRCGVKKEKQQLERRLRNDSR
complement(2872346..2873428)       PHAGE_Salmon_Fels_2_NC_010463: capsid protein; STM474_2843; phage(gi169936046)       0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MKKKTRFAFNAYLQQLARLNGVEVEELSSKFTVEPSVQQTLEDHIQQSAAFLTLINITPVTEQSGQLLGLGVGSTIAGTTDTTTKEREPTDPTLMEDVEYKCEQTNFDTVLTYAKLDLWAKFQDFQVRIRNAIVKRQALDRIMIGFNGVKRAKTSNRAENQLLQDVNKGWLQKIREDAPDHVMGSKTAEDGTTTAEPVKVGPGGKYVNLDAVVMDAVNELIDVEYQDDDELVVVCGRELLSDKYFPLVNKEQDNSEKIAADMIISQKRMGGLQAVRAPFFPANALLITRLDNLSIYWQEDTRRRSVIDNPKRDRIENFESVNEAYVVEDYRCAALVENIEMSDFTPPAAPVVAAESGNGE
complement(2873445..2874278)       PHAGE_Salmon_Fels_2_NC_010463: capsid-scaffolding protein; STM474_2844; phage(gi169936047)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MTVKAKRFRIGVEGATTDGREIQREWLVQMAASYNPTVYTALINLEHIKSYLPESTFNRYGRVTGLVAEEIQDGPLAGKMALYADIEPTDALVELVKKGQKLFTSMEVSTKFADTGKAYLVGLGATDDPASLGTEMLAFSASAAHNPLANRKQNPENLFSEAVETLIELEEVQDEKPSLFARVTALFTKKEQTDDARFSDVHKAVELVATEQQILSERTDKSLAENGERLSALESSLQEQQTAFAELQQQLSREDSRKDYRQRAPGGDAPAGTLTNC
2874421..2876187                   PHAGE_Salmon_Fels_2_NC_010463: terminase ATPase subunit; STM474_2845; phage(gi169936048)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MNTTLTPADLDPRRQAMLLYFQGYRVARIAEMLGEKVATVHSWKKRDKWGDYGPLDQMQLTTAARYCQLIMKEQKEGKDFKEIDLLARQSERHARIGKFNDGGNEADLNPKVANRNKGPRRQPEKNVFTDEQIEKLEEVFHASMFDYQRHWFEAGKTNRIRNLLKSRQIGATFYFAREALIDALLTGRNQIFLSASKAQAHVFKQYIIDFAKEVEVELKGDPMVLPNGAALYFLGTNARTAQSYHGNLYLDEYFWIPKFQELRKVASGMAIHKKWRQTYFSTPSSLTHSAYPFWSGALFNRGRAKADKVDIDLTHSNLARGLLCPDGQYRQIVTVEDAVRGGCNLFDLDQLRMEYSPDEYQNLLMCEFVDDLASVFPLSELQACMVDSWEVWTDFQALALRPFGWREVWIGYDPAKGTQNGDSAGCVVMAPPTVPGGKFRILERHQWRGMDFRAQADAIKKLTQQYNVTYIGIDSTGVGHGVYENVKAFFPAVREFVYNPNVKNALVLKAYDIISHRRLEFDAGHTDIAQSFMAIRRATTASGNRPTYEASRSEEASHADLAWATMHALFNEPLQGESANTSNIVEIF
2876187..2877218                   PHAGE_Salmon_Fels_2_NC_010463: portal vertex protein; STM474_2846; phage(gi169936049)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MSELEALTSTTPTEDMAPKNADVTAEAFSFGDPIPVLDRRELLDYVECVQMDRWYEPPVSFDGLARTYRAAVHHSSPIAVKRNILTSTFIPHPLLSQQAFSRFVQDYLVFGNAYLEKRTNRLGGILSLEPSLAKYTRRGIDLDTYWFVQYGLTTHPYEFTKGSIFHLMEPDLNQEIYGLPEYLSAIPSALLNESATLFRRKYYINGSHAGFIMYMTDAAQNQEDVNNIRQAMKSAKGPGNFRNLFMYSPNGKKDGIQIIPLSEVAAKDEFLNIKNVSRDDMMAAHRVPPQMMGIIPNNTGGFGDVEKASRVFVRNELMPLQKRLQELNEWFGQQIISFDSYEL
complement(2877245..2878222)       PHAGE_Thermu_OH2_NC_021784: SMF family protein; STM474_2847; phage(gi526118339)      7.17e-29            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MRSNSVRPSDLKKYLGLTIQTERLTSEQGLLKLINSLRFDSLRDIHDLVESVNLTSILKNKLTVESLINAERYYDIHRQYKIEIIPFGDKRYPLSLAMTPNPPAMLYIRGDVNILHEMPGVAIVGSRQVSRAGEEITKRVTSRICKSGLVIVSGLAIGTDTNAHQASLDAHAKTIAVLAHGLELAKPKQNAKLARDILENGGAWMSEYPVGRPAFKQSFVQRNRIQVGLSATSILIEAAKDSGTMTQADFAIKAGRPIFAVVPHKINNPLGLNCEGNIQLVNNNLASPLRTSEDYDDLMAVIADSINRIAEYSKIYLNNINTSLL
complement(2878212..2878694)       hypothetical protein; STM474_2848                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MMDLKDHNNQNHKKAIQTFSSLIIDELEHYIIGKKENKKDFTSVPFEVCVVPSHEEGKVSSALQTIAQKICGHYENGKVGQSLQRKTTVPSAHKDNGDRSVANHMATISVVSDVKNKVILLIDDVTTTGGSMIACVNLLKSKGARTVLPLALLETANYEE
complement(2879425..2880534)       PHAGE_Lactob_Lj965_NC_005355: hypothetical protein; STM474_2850; phage(gi41179236)     8.96e-77            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MLSYSNVLCRIPTEKDGTMSLSYVEFGKVDLSDVFFDSLKNDYPAFENWFLKKRNEKAYVSYDDYGKIDGFLYLKIENEELNDMTPSFPMKKRLKCGTFKIDARGTKMGERFVRKIFDFAMPHDIQEVYVTIFDKHQGLIGLLERYGFKLCSRKNLETENGCEGVYFKNFNWKSSSASAYDNYPMIKMNERNFLLAIKPEFHSKLFPESILRNENDSILEDVTYTNSIHKIYIGAMKGMEFLQPGDNILIYRTSDGLGPAKYRSVATSVCTLQEYKNIREFPSYNEFKSYCGGASIFSDEELQAYYRKGYPPHVIKLTYNFPLRKRIIRDELLNVLGYTPSYSGFFTLSDVHFKAVLSAGKVNENFIVD
complement(2880640..2880873)       PHAGE_Salmon_Fels_2_NC_010463: TumB protein; STM474_2851; phage(gi169936052)         1.54e-44            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MRIEIMIDKEQKISQSTLDALESELYRNLRPLYPKTAIRIRKGSANGVELSGLKLDEDEKRVMEIMQQVWEDDSWLH
complement(2880885..2881073)       PHAGE_Salmon_Fels_2_NC_010463: hypothetical protein; STM474_2852; phage(gi169936053)     3.62e-33            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MQDYLLESLKLQRIDFFIKLVAASECSDEEKRLAIQWVSELTDELMAKIRSHEYCRSMDVTS
complement(2881219..2881347)       hypothetical protein; STM474_2853                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MRKWICFCVAAVFHPGLGYVFFNETSGCRKMIDGGSGTADAG
complement(2881397..2883640)       PHAGE_Salmon_Fels_2_NC_010463: P2 gpA-like protein; STM474_2854; phage(gi169936054)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MAVSKFTLHNAPTTGGSNEAAVAFSWNNPKKAVNPYLDPADVAPESALSNLIALYAADNEQEQLRREALSDEVWERYFFNESRDPVQREMVQDRLISRAKMAREQQRFNPDLVILADVNAMPPHISKPLLERIKYFHSLGREKAYSRYLRETIRPCLERLERVRDSQASASFRFMASHDGLEGLLVLPEMNQDQVKRLSTLVAAHMSMCLDAACGDLFVCDDVKPEEIRQAWERVASEAMRLEVIPPAFEQLRRKKRRRKPVPYELIPPSLARMLCADWWYRKLWQMRCEWREEQLRAVCLVNKKASPYVSYEAVIHKREQRRKSLEFFRSHELVNEDGDTLDMEDVVNASNSNPAHRRNEMMACVKGLELIAEMRGDCAVFYTITCPSRFHATLNNGRPNPKWTSATVRQSSDYLVDTFAAFRKAMHKAGLRWYGVRVAEPHHDGTVHWHLLCFMRKKDRRSITALLRKFAIREDREELGTNTGPRFKSELINPRKGTPTSYIAKYISKNIDGRGLAKEISKETGRSLRDSAEHVSAWASLHRVQQFRFFGIPGRQAYRELRLLAGQAARVQGERKAGAPVLDNPRLDAVLAAADAGCFATYIMKQGGVLVPRKHHLVRTAYELNDEPSAYGDHGIRIYGIWSPIVEGKICTHAVKWKKVRKAVDVQEAVADQGASAPWTRGNNCPPVENTNKSGGDLPDINAMNEKELQYYLHNMGQKERRELTARLRLVKPKRKTVYKQNISEQ
complement(2883631..2884488)       PHAGE_Salmon_Fels_2_NC_010463: DNA adenine methylase-like protein; STM474_2855; phage(gi169936055)     1.39e-167           SalmonellaentericasubspentericaserovarTyphimuriumstrST474MSTILKWAGNKTAIMPELIKHLPAGPRLVEPFAGSCAVMMATDYHHYLVADINPDLINLYLMIQKDHEAIIQIARELFKGFNSDVQYYRVRQHFNYSISNEVEKAAYFLYLNRHGYRGLCRYNQKGEYNNPYGHYKKPYFPENEIRTFAVKAKRAMFICASFEETLALLQAGDVVYCDPPYDGTFSGYHTAGFTVDDQYHLASILERRSSEGHPVIVSNSDTSLTRSIYRNFTRHRIIAKRSMGVAAGDGKSAAEIIATKSAGWFGVDLASGPDISVETEVRAWQ
complement(2884712..2884939)       PHAGE_Salmon_Fels_2_NC_010463: hypothetical protein; STM474_2856; phage(gi169936057)     1.31e-12            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MQNELPKMFAPETDQLMAVIDIAKREERKGRALAVSIRLEALATHIANKGLNGIEAAELLRREATRYENESQELH
complement(2885007..2885348)       PHAGE_Salmon_Fels_2_NC_010463: hypothetical protein; STM474_2857; phage(gi169936058)     3.32e-67            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MAIEGAAATVPLSPGQRMEGLNRIAELRANVFGLNIEPELERFIKDMRDRRDINHKQNERALAAIFFMAKIPAERHGVNISDLTTDEKRELVKAMNHFRAVVSLFPKRLTMPN
2885673..2885810                   hypothetical protein; STM474_2858                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MSSPTQSCCKLFFLFFPKNKKIKLLKSFRPLPLINMLRPQALKQK
complement(2885953..2886462)       PHAGE_Salmon_Fels_2_NC_010463: bacteriophage regulatory protein CII; STM474_2859; phage(gi169936061)     8.98e-119           SalmonellaentericasubspentericaserovarTyphimuriumstrST474MFDYKISKHPHFEEACRAFALRHNMAKLAERAGMNVQTLRNKLNPDQPHQLTPPEIWLLTDLTEDSTLVDGFLAQIHCLPCVPMNEVAKEKLPHYVMSATAEIGRVAAGAVTGDVKTTAGRRDVISSINSVTRLMALAAVSMQARLQANPAMASAVDTVTGLGASFGII
complement(2886495..2886710)       PHAGE_Salmon_Fels_2_NC_010463: bacteriophage regulatory protein Ap1; STM474_2860; phage(gi169936062)     1.76e-24            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MIATPAEFAEWEGYSRGSVYQMIHNGKLANYIEKKEKNKGRVFILYLKYKKDQASKNMDKSAFNYNVVVGC
2886863..2887495                   PHAGE_Salmon_Fels_2_NC_010463: P2 CI-like protein; STM474_2861; phage(gi169936063)     2.75e-84            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MIQVKAGENTGGREAIHRLMAAYNFKSRQQLCDHLGASKSTMANRYLRDSFPAEWVIQCALETGVSLLWLTTGQGDPGSNIDPKKDINLVNSSKVKPLSELVSPEIDKAILSGGSLAEGGKAVIDSSLIPSGADDLLLVNTDSDSYLVDRSQTLPVNGMWLVDIDGIKSIVKLTRLPGNRLVVHQDESSFECSLSDIAVVGRALKIIKSL
2887497..2888522                   PHAGE_Salmon_Fels_2_NC_010463: integrase; STM474_2862; phage(gi169936064)            0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MTIRKQPNGKWLCECYPSGRDGKRVRKQFATKGEAIAFENFTMDEVNKKPWLGEKDDRRQLSEVIKQWHSLYGQTLADPKRLMSKLSIICHGLGDPIASELTAGDFTKYREARLKGEVRSEDGALMSPVKPRTVNLEQRNLSSVFGTLKKLGHWSAPNPLAGLPTFKIAEGELAFLAPDEIKRLLDACADSQSPSLLMITKICLSTGARWSEAENLQGHQVSKYRITYTKTKGKKNRTVPISQDLYDEIPRNRGKLFTPCRKAFERAIKRAGIELPEGQCTHVLRHTFASHFMMNGGNILVLRDILGHADIKMTMIYAHFAPDHLEDAVTKNPLNNLGWVR
2888519..2889730                   PHAGE_Salmon_RE_2010_NC_019488: hypothetical protein; STM474_2863; phage(gi418489682)     2.28e-123           SalmonellaentericasubspentericaserovarTyphimuriumstrST474MKSDYSNDDSITNFFDSFKGRKLFKLPVEIEENQSLVSDFIEKCKAIKIHIEEHINNSNYENSSQLENCLDVFDSLERGISQTLEAFLSGDIKASYDKFEKMLESKHTSIHLTNISTRLSAICNSETPLYRVRKSDNYLTKREEIFHIPFSQRHLVRNQRYSVAGLPCLYLGASLYVCWREMNRPDFNKLFVSAFYTSQTHPEEMILNLNIEALIDITSNFRNKNQPKNFKLALSLVALWPLILSCNYLNKQQDAIFIQEYVIPNLLMQWISRQAEHKIIGIAYHTTKIDSGYYGYKGLNVVFPPQINHSDVKRHDYCPHLAKQFVCTPPLSWQVLKSIEYIPERQSISSTEKLSKYLRRGKKWDILDQLDEEIVSVYQLTDFYKLEVCIQDVQNPGRIKTKK
2889844..2889891                   attR                                                                                 N/A                 ATGTAGGAATTTCGGACGCGGGTTCAACTCCCGCCAGCTCCACCAAAT
2890073..2891269                   PROPHAGE_Escher_MG1655: CP4-57 prophage; integrase; STM474_2864; phage(gi16130540)     6.25e-174           SalmonellaentericasubspentericaserovarTyphimuriumstrST474MARTTRPLTNTEVLRAKALEKDLTLHDGDGLFLIVKTSGKKLWRFRYQRPATKQRTMMGLGAFPALSLADARGLRADYLALLANGIDPQIQAEVAEEQQQIALDSIFSTVAANWFQLKSKSVTPDYAKDIWRSLEKDVFPAIGETPVQQIKARTLVEALEPIKARGALETVRRLVQRINEIMIYAVNTGLIDANPASGIGMAFEKPKKQNMPTLRPEELPKLMRSLVMSNLTVPTRCLIEWQLLTLVRPSEASGARWAEIDLDKKLWTIPAERMKAKREHIVPLSPQALGILDVMKPISAHREHVFPSRNDPKQSMNSQTANAALKRIGYGGRLVAHGLRSIASTALNESGFNADVIEAALAHSDKNEVRRAYNRSTYLNKRIELMAWWGRFVYQTNL
2896322..2896333                   attR                                                                                 N/A                 TCGAAAATATAT

#### region 8 ####
2884586..2884597                   attL                                                                                 N/A                 GAATGACTATTC
complement(2894442..2895008)       PHAGE_Entero_P4_NC_001609: amber mutation-suppressing protein; STM474_2866; phage(gi9627520)     2.37e-72            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MTTLTLQQAFEACQTNKTAWLNRKTELAAAEQEYQELLLDDNASGSRRLQSLRDLIDVKKWEVNQAAGRYIFSHEEVQRISIRNRLHDFMQQNGAELTAALAPELMGIKNQPAMIKNRALDRSASYLREALSVWLTAGNDINYSAQDKDILTAIGYRPDAPSRDDNREKFTPAQNMIYTRRRAGLVAQ
complement(2895264..2895959)       PHAGE_Entero_P4_NC_001609: head size determination protein sid; STM474_2867; phage(gi9627518)     3.31e-103           SalmonellaentericasubspentericaserovarTyphimuriumstrST474MERLETARSAHLANASRMDETTTAISQVQTQKNELEQENGNDSGAWRAAFRAGGAVITDELKQRHLARVARRELAQECDSMNEVLSFELDRLKGACDRTARAYRQAHHGVLSQYAEHELDAALRESCGALIRAMKLNILVLNNPLANTTGHQGYIEPEKVVMQQVKAWLEQAVKGCNIRLTDEPVLFKTGLSASTMPHMEHDVAATPVQRKFWQEKMREREADLKARGLLS
2895927..2896202                   hypothetical protein; STM474_2868                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MRRAGSLKAFHCRFKVVGNNSGMSHVGSPLRFNLRRFCRAGHNNTIHCRCGKNGTNSTQNPAGQRKVSGKPYSLFVFLLITIHYCSLKRKR
2896539..2896805                   PHAGE_Entero_P4_NC_001609: transcriptional regulator; STM474_2869; phage(gi9627517)     9.88e-41            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MHTAFSSPSSAPAAPLMQVSDTVHERFIRLPEVMHLCGLSRSTIYDLISREAFPKQISLGGKNVAWAQSEITAWMTDRIAERNRGYDA
2896970..2897353                   PHAGE_Entero_P4_NC_001609: putative CI repressor; STM474_2870; phage(gi9627516)      2.57e-48            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MHLLLAQWFHDLCSYRVMVAQAGPTSVGPVSVRAGISTPVWATTTERGNSGGSITCYLTEVALMATILTPSYPQFVFVFAAVRRADRKPRICMLRTVAGDEQAARLSLVRDYVLSFAGRLPVAEVRA
2897350..2897577                   hypothetical protein; STM474_2871                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MRHTTITARDLECLEHMRNVGQLVNELMQVQDCATVRRDPVQQSQLTSVIYLMTAQLDGVVERCNQRWLTGEGNV
2897574..2897894                   PHAGE_Entero_P4_NC_001609: hypothetical protein; STM474_2872; phage(gi9627513)       9.71e-67            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MKNPLPPVLRAALYRRAVACAWLTLCERQHRYPHLTLDALESAIAAELEGFYLRQHGEEKGRQIACALLEDLIEAGPLKAAPSLSFLGLTVMDELCARHITAPVLH
2897909..2900242                   PHAGE_Entero_P4_NC_001609: DNA primase; STM474_2873; phage(gi9627512)                0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MKMNVTETVKQACGHWSRILPALGVKVIKNRHQACPVCGGSDRFRFDDKEGRGTWFCNQCGAGDGLKLVEKVFGVSASEAAGKVNAVTGNLPPVAPEVIAAAEAETEADRKAAAALAVRLMEKTRPASGNAYLTHKGFPGHECVMLTATHKTGGVTFRAGDMVVPLYDNAGALVNVQLINSDGLKRTLKGGAVKGTCHIIGGQKQAGKRLWIAEGYATALTVHHLTGETVMVALSSVNLLSLASLARQKHPACQIVLAADRDLNGNGQSKAAAAADACEGIVALPPVFGDWNDAFMQKGEEATRKAIYDAIRPPADSPFTTMSEAEFTAMSTSEKAMRVHEHYGEALAVDANGQLLSRYEAGIWKIIPPSDFARDVAGLFQRLRAPFSSGKIASVVETLKLIIPQQDAPARRLIGFRNGVLDTATGTFSPHHKSHWLRTLCDVDFTPPVEGETLETHAPHFWRWLDRAAGGKPEKRDVILAALFMVLANRYDWQLFLEVTGPGGSGKSILAEIATMLAGEDNATSATIETLESPRERAALIGFSLIRLPDQEKWSGDGAGLKAITGGDAVSVDPKYKDAYSTHIPAVILAVNNNPMRFTDRSGGVSRRRVILHFPEQIAPEERDPQLRDKIARELAVIVRQLMQKFSDPMTARTLLQSQQNSDEALSIKRDADPAFDFCGYLEALPDPDGMYIGNANIIPRQPRLYLYHAYLAYMEAHGYRNTLSLTMFGKGLPAMLKEYGLSYEKRRKNQGIQTNLTLREESNADWLPKCDDPIAK
2900734..2901798                   PHAGE_Entero_P4_NC_001609: integrase; STM474_2874; phage(gi9627511)                  6.47e-56            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MPNQLKPLTNVEIAGAKPRSTDYELRDGEGLYLLVKTSGRKAWHFEYYHPVTKKRTKTSLGPYPVVTLAMARETRTKYRRLLYQGIDPRQHLAGIAEEKRIQNECTLEKVAEQWLKEKKRTSDLSEDHAKDVWRSLEMHVFPSLGNTPVTEIRPKMLKEHLTPLEEQGILETLRRVISRLNEIFRFAISEELIEFNPADNLVARFKKPKKQNMPALHPSELGRLMLALQNASIRKETRCLIEWELLTWVRPGEAVSARWCDIDMKKAEWRIPDTFMKMNRSHTVPLSKQALRVLQIMEPVSRHRPWVFPSIRKPLEHMHQQTANAALIRMGFGGELVAHGMRSRQDRRRRSFSP
2901812..2901979                   PROPHAGE_Escher_MG1655: CP4-57 prophage; integrase; STM474_2875; phage(gi16130540)     1.13e-10            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MLAHQKEDEIEAAYNRSDYLEQRRPLMQWWGNYVDAARRQALLGAEEPLQIVEGE
2916904..2916915                   attR                                                                                 N/A                 GAATGACTATTC

#### region 9 ####
complement(4439208..4439936)       PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; STM474_4387; phage(gi100101)      5.91e-39            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MIIVSVLRQSKDFTTKHAQWLHKQLKGYDSVCLTDALKIKGVNTAPLLYDWPGWWAKLELFNPLHPVLGNEDILYIDIDSVIVGDITPLTTMKKITLLNDFSQHGASVAPATGIMFIPAPAKKNVWDEFMKNPEKEINAIRTPPYHGDQGFIGRICQDAERWQNILPGRIISYKANIATPKMIGFNPELYDGTGNGKLPDGASIVCFHGSPRPWNTALPWVPYFSLKNTIQSKVKQYKLSLR
complement(4440133..4440423)       putative inner membrane protein; STM474_4388                                         N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MDYGNTGDMRLFAVMNFYYIDYLCRPITIAVVIFLFWWRLANEMYIYGSKKQKKTGLWINRKLNSKFGIDIELGAVKRGNKITPIPTLILYIPMKI
complement(4440672..4441127)       PHAGE_Haemop_SuMu_NC_019455: enoyl-CoA hydratase/carnithine racemase-like protein; STM474_4389; phage(gi418489075)     2.04e-28            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MSQTTVWLACYKGRSEHRGIARFADWLTRKVTRGIYSHCELAVAHGGNEYLCYSASFRDRGVRGKIIPLPDDKWDKLPLKATLPEVEVFFRKHNGKRYDWQGALGIALYNRERKDRLFCSEFCAEFLGLNDSWRYSPSHLYALVSSWQYDC
complement(4441124..4441729)       putative cytoplasmic protein; STM474_4390                                            N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MTQYAYYHPATFEVIDWIDTSSLNVVLPDSVISIDDEQWRLRDKNCWVCLNPLEFITTPPPGKFYRLQGNEWVYDEALFVSALESVKAQVIQAIKAHRDDVTADYIVIDGNHFHSDANSRIQQMSLTRMGQAQQIPAGLMWQAKNNGLIELTNDIAAQFETVTMDHDMRLFANAQRHIAAVEALEDIEAVLDYDYSTGWQP
complement(4441734..4443479)       PHAGE_Salmon_SP_004_NC_021774: phage tail fiber protein; STM474_4391; phage(gi526003631)     3.07e-85            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MDNEFYTLLTDRGMAKIASALADKKQLHLQKMAVGDGGGQYYEPIASQTKLRHEVWRGEMNTLTVAPNNPNWLIAELVLPEDVGGWYVREVGVFDDEGELIAIGKFPESYKPLLPGGCGKQVCIRLIMEVSNTTAVTLTVDPSIVLATRDYVDTRLDEHEHSTNHPDATLTQKGFTQLSNATDSDDETKAATPKAVKAAMAEARNHTHTWNQITGVPDGTLTQKGIVKLNSATDSTSTTEAATPSAVKAAMDKANAAAPANHTHVWNQVTGVPDGTLAQKGIVKLNNATDSTSTTEAATPSAVKAAMDKASAAAPARHTHAWGQITGAPDGTLTQKGIVKLNNATDSTSTTEAATPSAVKAAYDKASAAAPANHSHYQFFTANGTFTVPDGVTQVFVEMLGGGGGGGGGGHTSNTDGLLYCSGGNAGKSGEPEIAIVPVIAGNNYPVTVGAGGASGAGGVLPNSNPTGNVVQVGQAGNSGINGGNSIFIDVVANGGAGGAGGIVQSRIPLSGFNQLDSISGGNAETTFFGKGGTGAVLSNGSNASGYGAGGGGGASVNSLNIALSGYAGGRGSSGFVKISW
complement(4443482..4444114)       PHAGE_Burkho_BcepMu_NC_005882: gp51; STM474_4392; phage(gi48696961)                  5.01e-32            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MDKLLLPPPLASDERFSILANIAAERFAQIDLTALLVYLVDIVDASALPSLAEQFHVQGLEGWLFAANEQEKRELIKQAIELHKYKGTPWAVRRVLEILSLPGTISEWFEYGGKAYFFKVEIKLINQGMDENLFNNLVDLIHEYKNVRSKLEALIVWIINQSAIPVIGSALYGGEITTVLPFQVLEVQQTKPIYFGTGQWSLEITSIYPE
complement(4444107..4445222)       PHAGE_Burkho_BcepMu_NC_005882: gp50; STM474_4393; phage(gi48696960)                  2.24e-132           SalmonellaentericasubspentericaserovarTyphimuriumstrST474MAIAEPDFIDRDPAQITSEMIAQYEEASGKKLYPAQAERLLIDLFAYRENLVRIAIQEAAKQNLVAYSRAPMLDYLGELVGVHRLPAQAAKTTLQFSVTQAAKSNLVIPQGTRASASDSVMFATDEDVLLPAGSLSVAVTATCVVTGEPGNNWQPAQISALVDRVGNYDISVTNLTASSGGCGEENDDALRKRIQLAPESFSNAGSYGAYRFHTLSVSQSIIDVAVLGPDEGLAEGCVELYPLTLNGLPGPELLAQIEREVSKEKKRPLTDKVSAKCSPRVAYQISARLTLFTTADQETTLAAAREAINTWTRSRQTRLGQDIVPNQIIKVLQVDGVYDVALDMPAKKVLQAHEWAECTAIDVTIAGVSDG
complement(4445213..4445572)       PHAGE_Burkho_BcepMu_NC_005882: gp49; STM474_4394; phage(gi48696959)                  3.12e-43            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MNTKTRPSTLHWQPALQRPEEYVCGLDDIHQAIHIILRTPRGSDPHRPLFGSNLWRYIDYPIERAIPHVVRESVEAIRMWEPRCRLLKVTPTIDGEHLTLRVQWRAADGVINSTEVLWR
4445633..4445755                   hypothetical protein; STM474_4395                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MAGSECVLPGGASALTGPVLMHILLNGEDRVLRKVKMKLL
complement(4445736..4447283)       PHAGE_Salmon_epsilon34_NC_011976: GtrC; putative membrane protein; STM474_4396; phage(gi221328637)     6.53e-62            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MNTMLKILPKTAMILLAFLAIFLIEWYTPIHSDDYRYYLLGISPESHFHHYMTWSGRIIADYTSALILYTRSQLVYSISAAVSTLVFCYFIVKTPSGTLRWNKSDYLLFPLIFFTYWISNPNLGQTTFWIVGAANYLWTNLFVVAWLFFFYTITIKNSKAISPWVALLSFMAGCSNESVSPFVSLISVLAIAYELWQNKSVSRNKIVYSLCAIAGSCVLILSPGNFIRASGKEFWYGRPIFERIFIHLTERVHNHLALIWIAYVVLLLLVLLVIFNKQIRAKIDKTSLICAALVVCIGIGTSLIMFASPSYPDRVMNGTFMFFLLAISFIAYALLKSGVKAGVVGVTAVTVLCGIVFLWSYSLMLNGYKKTAGQEIVRQKIITKEIAAGKQKFIIPDYYFVKLQNSGGHFGLFHDPAVYGEYYHVQAIFKKKVNFDYSVIANGAKHSLSNETTAYSNTRGDFAIISREQLTGSITLSVNGRQKTIPVEKMKHAEINDEFWYYASVDKGEITAISF
complement(4447283..4448212)       PHAGE_Entero_SfV_NC_003444: bactoprenol glucosyltransferase; STM474_4397; phage(gi19549012)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MKISLVVPVFNEEDAIPIFYKTVREYSSLKPYNVEIIFVNDGSHDATESIISALAVADPLVVPISFTRNFGKEPALFAGLDHATGDVVIPIDVDLQDPIEVIPHLINKWQAGAEMVLAKRIDRSTDGHLKRKSAEWFYRLHNKISTPKIEENVGDFRLMSREIVENIKLLPERNLFMKGILSWVGGQTDVVEYARAERVAGNSKFNGWKLWNLALEGITSFSTFPLRIWMYIGVSVSALSLIYAMWMIIDKLMWGNPVPGYPSLMTAILFLGGIQLIGIGIMGEYIGRVYTEVKQRPRYIVKNKKTMME
complement(4448209..4448583)       PHAGE_Entero_SfV_NC_003444: putative flippase; STM474_4398; phage(gi19549013)        2.19e-59            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MIAIMIKLFIKYVSIGVLNTALHWAIFALCVYGFQTSQALANVAGFAVAVSFSFFANARFTFGASVSTGRYLLYVGFMGVLSAVVGWTGDKCAMPPIFTLIVFSAISLICGFLYSRFIVFRNEK
complement(4448899..4449621)       PHAGE_Burkho_BcepMu_NC_005882: gp48; STM474_4399; phage(gi48696958)                  2.85e-38            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MKGVTRQTGIISDIDEAVVRVRVTLPECDNLRSNWLAVLQRNTQDNKDYWLPDIGEQVEVSLDDNGEDGVVLGAVYSSVDTAPLASRDKRYVQFSDGAAFEYDRALHQLTVNGGIEKIVIEVKEHTQLTSPQVEVRAQHVTVISETVDVAATSVGVKAVDVNVEAPHTGIKALNVTVDAPLSTFTGDVTVMKKLTWLGGMAGSGGVGNSAVITGNVNVLGNVNASGTLMDNGGNSNHHSH
complement(4449631..4450674)       PHAGE_Burkho_BcepMu_NC_005882: tail protein; STM474_4400; phage(gi48696957)          1.76e-101           SalmonellaentericasubspentericaserovarTyphimuriumstrST474MAEITVSGGVFATLTPIFTLWYGHKEITYDIAPYVTSISYSDSIKNESDVIAIALEDSTGRWVNEWYPGKGDTLALRLGYQGEDLLDCGIYVIDKIDISAPPSTVNIDGIATSVSKALRTKNSQGFEETTLSAIASRIAQKHGLTLAGKIAPLTIDRVTQYAETDVAFLKRLASEYGYTVKVTATELIFSHLPTLRCLAPVKTLRRTDVSHYTFKDTINRIYKNATVQHQNSKQKELVIYTHDSQEKTSARGAATSADTLKINSRAPDTGAAQAKANAALDSHNEYQQTGTLSLMGCPQLTAGNKIELSDFGVLSGQWLIDKSMHKLTRSGGYTTEIDISRGPATSQ
complement(4450662..4450871)       PHAGE_Burkho_BcepMu_NC_005882: gp46; STM474_4401; phage(gi48696956)                  6.01e-23            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MRYLEHVTTDGERWDNLAWRYYGDALAYERIIAANPHVAIMPVLPSGVRLIIPVISVTQTTPELPPWLR
complement(4450871..4451824)       PHAGE_Burkho_BcepMu_NC_005882: gp45; STM474_4402; phage(gi48696955)                  4.32e-50            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MYAVLGEIEFDVVAYWDEFESTMGVDYTSHARIEGKPGVQFIGDKLDKITLKFNFHSQYCQPTTELNRLREAMTAHQAMALVFGNGDYRGWFVITDLTATHQHTDPYGNVIAQGGSLSLQEYTGDPKSPLLPPAITTQEPNIDEMLDELPDVNDSWFDELLSVVEEGMREAKEMMDEVADAIDDIKKTIAQAKELVKEAKALKEKCGDIVDSLKKTMSSIDALFQQPLDLQTLAGLPKALAAKMQELIDSLPGIRECAGDAGTLIEHAESLFDAITSSVAEATYDSAATLVNQARGTLQTSAPDVSQLAAADITRSL
complement(4451824..4454178)       PHAGE_Burkho_BcepMu_NC_005882: gp44; STM474_4403; phage(gi48696954)                  6.50e-61            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MANDIITQLQARNETLTQAIARYGSLNASTLHTLSFEQTKVTRLTQQLANSALRREENDKQRAGLLEKTQTFAGQLGKLLNVETPDWKLPYEFQGNMVDMAAKGGMDNTARDALSLNIRDWSLDFNQDQKDLQSTAATMIEGGVSALQDLSRYMPDIAKAATASRDSAQSWAQAALATRDKLNIAPDDFRFAQNMLYSVAKSGGGSVAEQTQWINAFAGKTGAQGKEGIAELTATMQIAMKNAPDAGAAAANFDHFLKSAFSKETDSWFARQGVDLQGSLLEHQQNGIGVTEAMTHIVQMQLEKMNPQILDTFRQTMKIEDLSARGDALQAMVEKFNLGAMFGDAQTRDFLAPMLANMDEYRQLKASAMQAAGQHVIDDDFAAKMTSPGEQTKALQLSLNDLWLTVGLELMPAIGELAQSITPLVRQFSAWLRENPALVQGVAKVVSVIWLFNGALNILRLGANLIASPFIRLIDIFLKVKAGLALGGGSRALSVLKSFGNGAKSLTMLLGNGLIKGLRLVGQTFIWLGRALLMNPVGLTITAIASAAYLLYRYWEPISGFFAGVWERIKTAFDGGIAGVTRLILDWSPLGLFYRAFAGVLDWFGIELPASFSEFGGNILDSLINGILNALPFLSGAIEKIKALIPDWAKSALGISAEMPSVAAAVPGIAGTMVAQQASAPLASGAKAVTTSAKTMASPQPVKTKSAATPPTPAALPGKSGGKPYTLPSRAQSNVQVHFSPQVTVQGSGANAAKDINNVLSLSKRELERMINDVMAQQRRREYA
complement(4454275..4454403)       hypothetical protein; STM474_4404                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MALLARWFRFPPSEIDALSVDDFTCWLDEASAQIKHEYDSQA
complement(4454363..4454680)       PHAGE_Burkho_BcepMu_NC_005882: gp41; STM474_4405; phage(gi48696951)                  1.65e-10            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MNEKYTLQFPFTSAAGERIDVLQLRRLKVKDMRAARRASDKPEEWDEPLMAAMTGLVTEDLAEMDLLDYQALQKRFQSMLSMATEPTATVAGNGAAGEVVSLSAQ
complement(4454732..4455256)       PHAGE_Burkho_BcepMu_NC_005882: gp40; STM474_4406; phage(gi48696950)                  5.56e-90            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MAGKIQINRITNANIYLDGNNLLGRASEIKLPDISMIMQEHKALGMVGKIELPAGFDKLEGEIKWNSFYHDVMRKTANPWQAVALQCRSSIDCYNSQGKADQLALVTHMTVMFKKNPLGTFKQNENPEFSSAFGCTYIKQVVDGETLLELDYLANIFRVNGADQLNAYRNNIGG
complement(4455256..4456683)       PHAGE_Burkho_BcepMu_NC_005882: major tail sheath protein; STM474_4407; phage(gi48696949)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrST474MAANYLHGVETIEIETGPRPVKAVKSAVIGLIGTAPCGPVNQPTLCLSESDAAQFGPGLANFTIPQALKAIYDHGAGTVVVINVLNPAVHKSTIPSETVKVDDNGQIQLKHGAVQTMNIGRSTNAGNAYIKGTDYTIDMLTGKITCMGTNLKPGVQAYVNYTYADPTKVTAADIVGAVNTAGDRTGMKLLQDTWNQFGFYAKILIAPVFCTQNSVAVKLIAQAEALGAITYIDAPIGTTFQQVLAGRGPQGAINFNTSSDRARLCYPHVKVYDSATNSEVLEPLSSRAAGLRAKVDLEKGFWWSNSNQEIQGITGVERSLSAMIDDPQTEVNQLNENGITTIFNSYGSGLRLWGNRTAAWPTVTHMRNFENVRRTGDVINESIRYFSQQYMDMPINQALIDALTESVNTWGRKLIADGALLGFECWYDPARNEQTELAAGHLLLSYKFTPPPPLERLTFETEITSEYLVSLESNR
complement(4456673..4456870)       PHAGE_Burkho_BcepMu_NC_005882: gp38; STM474_4408; phage(gi48696948)                  2.20e-11            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MKYIYSGPASGVTLADGQEVLLWPNSEISLPEDNEWVITMIARRHLVPVVTQEVETNEEEIVHGS
complement(4456867..4457322)       PHAGE_Burkho_BcepMu_NC_005882: gp37; STM474_4409; phage(gi48696947)                  2.66e-15            SalmonellaentericasubspentericaserovarTyphimuriumstrST474METLSVIHTVANRLRELNPDMDIHISSTDAKVYIPTGQQVTVLIHYCGSVFAEPENTDATVQKQLIRISATVIVPQISDAINALDRLRRSLGGIELPDCDRPLWLESEKYIGDAANFCRYALDMTASTLFIAEQESKDSPLLTIVNYEEIQ
complement(4457482..4457796)       PHAGE_Burkho_BcepMu_NC_005882: gp25; STM474_4410; phage(gi48696935)                  1.36e-29            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MKLSIDFWEVISLLLSFVGLMFAAGKLLLAQIEKRLNERFEALEAARRESEAGWSRLEREFLEFRADLPLHYVRREDYLRGQAVLEAKLDALYSKIELIQRGNH
complement(4457809..4458414)       PHAGE_Burkho_BcepMu_NC_005882: gp22; STM474_4411; phage(gi48696932)                  7.11e-68            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MRYQYVCLVCAMTFLSADAAEPPRASLQWRNEVIRTAREIWGLNAPVADFAGQLHQESGWAPDALSPAGAQGMAQFMPATAKWVSQLYPELHENKPFNPAWAIRALVQYDRQLWKSVLAKNSCQRMAFTLSAYNGGQGWVNRDKKLAAAKGLDASIWFEHVERVNAGRSAANWRENRHYPKAILYQHAPRYLQWGQASCIH
complement(4458417..4458704)       PHAGE_Burkho_BcepMu_NC_005882: gp21; STM474_4412; phage(gi48696931)                  3.36e-14            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MRKIIVPRLSGWLVASVVLFALIGWTSSAQIPVVIYKLSLVSLSAVLGYWLDRSLFPWARPDSFCPWEESLCCAAAMIRRAIIVAAICLAVALGL
4459280..4459627                   PHAGE_Burkho_BcepMu_NC_005882: gp01; STM474_4413; phage(gi48696911)                  2.19e-30            SalmonellaentericasubspentericaserovarTyphimuriumstrST474MIQKSKEMVRLPEIINDLAFHASQVLIESMNIDSASAENAGQAIADRMMRNWGGQSIYFPKGISGRASERDYQIYSECDGRNYAELAKKYNLTLQWIYKIVKRVHTEKQHQRRML
