gi|00000000|ref|CP002552.1|  Nitrosomonas sp. AL212 chromosome, complete genome. 3180526, gc%: 44.84%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
197923..197934                     attL                                                                                 N/A                 AAAGCTGCAAAA
198167..199180                     PHAGE_Bacter_APSE_2_NC_011551: integrase; NAL212_0327; phage(gi212499734)            8.42e-110           NitrosomonasspAL212MSLCKRGKTWWISFTTPSGERVRCSAATEDKTQAQEFHDKLKAESWRVVKLGDKPKRTWDEAAYKWLMETQDKKTHHDDVAKINWLQQFFRGKYLDELTRDVIAGIGELKRKETSSATANRLLALIRSILRRAALDWEWIDKPPVIKLYREARRRVRYLSATQATMLIQELPQHLADMVTFSLATGLRRSNVTKLEWSQVDMQRNVAWIHGDQAKAGKPIHVTLNATAIAVLTRQIGKHPRSVFSYKGKPITQVNTKAWYKALKRAGIEDFRWHDLRHTWASWLTQNGVPLNVIQEMGAWESAEMVRRYAHLAPEQFAQHARVLDGVLNVTNLAQSK
199477..199848                     hypothetical protein; NAL212_0328                                                    N/A                 NitrosomonasspAL212MTKHTNKQASPFCLRLTPEERATLEREAAGLPLSEYIRDRVFDETRAKRRTRNKRPVKDHKILSQLLGELGRSRLSNNLNQLAKAANCGLLNVTPEVKTSLLNACADIRHIRMALMKSLGLDR
199854..201152                     relaxase/mobilization nuclease domain-containing protein; NAL212_0329                N/A                 NitrosomonasspAL212MIIIASQRGGAAKLAAHLMNVRDNDHVELHEVSGFMADTLPDALQEIRAQAMGTRCNQYLFSASLNPPETEKVGTDVFEQAISRIEERMGLQDQPRVIVFHEKEGRRHAHCVWSRIDTTEMKAINLPFYKSKLMEISKEIYLEQDWKLPQGLIERGQSNPLNFTRAQWEHAKRLDDDPRLIKAALKDCWAVSDSKEAFQNKLEERGYYLAKGDRRGFVAVDCQGEVYSLSKWLDVKTKALKERLGDPQQLPSVEETKANIDSRLVERVQQFTSEIQKNSGARMESLLEQKVRMVDRHQDERKNLDEMQQQRWHQESEVRQTRLNTGIRGLWDRLTGQHDQTKDQNELEAWQAVIRDRQQRDELIQRQLQERHSLQLNINHVRKAQENEMEHLKTMMFSTLPAEMKDRLQKQFEQSQSRQSNSSPNHSNNYDL
201190..201738                     hypothetical protein; NAL212_0330                                                    N/A                 NitrosomonasspAL212MKNIFSKKKASVPGFLVPRVRKHHVSMLYTNYETEWRVFAEGSLRNKVFHDDVLNRGDKCLVCNKSLGTANSNKTSHIEKHHHCYMRLCTGKILPENSYDIYRKASKTEFPLVPDCRQCKIDNPKYYIGCIKKVFPVHRKCHCKIHKVEKYLFEKLGKKLQRAYVLASENAAATHTTVRKKQ
complement(201774..202517)         PHAGE_Rhizob_RHEph10_NC_034248: hypothetical protein; NAL212_0331; phage(gi100072)     4.19e-06            NitrosomonasspAL212MSITDQKRAKLYRMVMKDHVCPYGLKSKDLLERKGCDVEDHHLTTREETDAFQKEHDVETTPQTWIDGKRIGGYDELREYFGEKIQNDDETNYKPVIAIFSVSFLMAVAMNWEIYETLLTLHTLEWFISIAMCLLAVQKLQDIESFSTMFLSYDLLAKKWVRYSYLYPFGEAISGILMISGTLVWLSSPIALFIGTVGAISVFKAVYIDKRELKCACVGGNSKVPLGFVSLTENLMMMAMGVWMWLK
203179..203583                     PHAGE_Prochl_P_TIM68_NC_028955: hypothetical protein; NAL212_0333; phage(gi971760402)     2.04e-09            NitrosomonasspAL212MNLPFQSDALGKLTLRLTVGVLMLFHGVHKVLNPGSIDFIGKQLNSMDLPQALAYGVYLGEVVAALMIILGIFSRLGGLLVFGNMIFAIVLAHRSQLFAFTDHGGYALELQVFFLLTGLAVFFLGSGRFAVKPD
203849..204220                     hypothetical protein; NAL212_0334                                                    N/A                 NitrosomonasspAL212MTFKEKIKNLFNFHKQFGHADKIAFPAFRSTGSMETTDSIKQVFPEEHLSPREKIFYSLLVEGTQSGASLTLRTGLRANEFIQALNELINEGKIIKKGYFYSNKDEVTRDEIISFKPITPSNQ
204236..205018                     hypothetical protein; NAL212_0335                                                    N/A                 NitrosomonasspAL212MTSLEYVILIIFITYFSISKALSAKYSFIKVPWHIVIANPDHFGGPTQRIKFFGALLLWIFLSLFIMLLIANFILEPILSYIYQSLKSINFEIPLDKSALLILFSIIIYLDSTKKARELILEKEEVERFKNKNSTKSKGFFKFFPVIAIYSICPKIFKHLFFHFYEANQTIIDSCSLLLVDKYGAKNCLDFFENHIKEHPNNSTLNYVNQQLHGFKKIKQKACVAITGKIQYAGFSATERFIVLSMKKAQTESIKKKLLR
complement(205387..206970)         PHAGE_Stx2_c_Stx2a_F451_NC_049924: tail assembly protein; NAL212_0336; phage(gi100053)     1.70e-110           NitrosomonasspAL212MTTMKPLAQLDQLNLDAHTKQQVTGIVQALLDQAQQAIRVQELKIQALTMELAHLRRIQFGKKNESLSSQPNLFEESVLADIAAVHAEIEQIDVTVKTNAPKSPRVRAGRQPLPDHLPRIEHRHEPESCQCGQCGNKLVKIGEDVTEQLDVEPARFFVHRHIRPQYACKSCETITAEPVPPAIIDSGMAAPGLLAWVITSKYLNHLPLYRLEQIAAREQVTLSRSTLAEWVGRIGVALQPLTEQLKWHLLQGNTLHADETPVTQLEPGNGKTQRAYLWAYRSNDLDPGPRIVVFDYQISRSGQHARNFLQNWQGHLLVDDYGGYKALFSRAALSCTELACWAHARRKFFDLHQANGSSMAFEALQRIANLYAIEKESKHLNIELRQQLRAEKSLPVLDELHDWLRQTRMQTAHGGASAKALDYALKRWPSLVRYAHTGYLPIDNNPVENSIRPIAIGKKNWLFTGSQRAGQRAANIQTLLGTAQLNGLNPGAWLNDILTKLPTWPNSRIDELLPFAPEFIQSLKLKQ
complement(207024..207374)         PHAGE_Stx2_c_Stx2a_F451_NC_049924: tail tip protein; NAL212_0337; phage(gi100054)     2.51e-18            NitrosomonasspAL212MSGLIAPVGQIWMVVEPVDMRRGIDGLSLIVQQTLGHSPCAGSAFVFCNRTRNRMKVLLWDGTGVWLCHRRLHQGRFVWPKLEEGCFELTQSYWEWLIAGVDWQRLSALPPAHLQA
complement(207362..207658)         hypothetical protein; NAL212_0338                                                    N/A                 NitrosomonasspAL212MTSRERQGGHIKAWEASGLSQAAYCRDHGLNSKTFGNWLRTYRDVQKHNQPISLIPAKITPVASVSGYLKLRCSGGHTLELSTNVSPQWLGELLKCLD
complement(208137..209003)         hypothetical protein; NAL212_0340                                                    N/A                 NitrosomonasspAL212MAGHRKDNDQSEGVSLDSLPKWLRDMIDLNNESAGRETGRIKRFNLPVSDKALNAEKEKDERRFSALMRLLQDPHYARIYHHAVAAVTAAEEATDKARRKLEQESEFAEKRRRELLDKAAQLPDGTKIFQSLSDGRIYSEHGEDVTHRKDSITGLHPNSPSWEEYQYAKKITEEIKKQRQEVETYQHEVLDPTKKRLGDTENPATLDELEKITTKIKEEMPAVVQIEHEKLKAGELKGSIPTKNATADELFGSYEPNAPKIQADFKTAHDEPYGSSATSLPTIIPKFT
complement(209070..209375)         hypothetical protein; NAL212_0341                                                    N/A                 NitrosomonasspAL212MFIAVLTMSGIATAQSGTTSKFMQLGEGDRYWYLEGAVSTVSHLIATHNKQKGDCVANWYLKDRDNKRRQIEDTLTKYPAEGPTTIVLSLLTQACGELIAK
209621..210181                     PHAGE_Ralsto_RSM1_NC_008574: hypothetical protein; NAL212_0342; phage(gi117676354)     2.99e-28            NitrosomonasspAL212MALIGYVRCSTNRQMVLQQIDALRDAGCLHIYKDKAVRATAKKRPGLMAVRKALKSGDTFVITSIDRAFRSTIDAIIFLDDITKDGVTFRSLIQNIDTRTPEGRRWYIHAASDAEYERAVISRRTREQMAAAKRRGKKFGRPSKLSRKQISWARKALKTDKEKTKIEIAQELKVCPRTLTRALSGI
complement(210227..210733)         Antirestriction ArdA family protein; NAL212_0343                                     N/A                 NitrosomonasspAL212MTTLHAQPYDISGTGFYFDSVEKYELKLQQLKKYLGQSCEEFEIQFIDGENIDCELFSALGIHQGNFAAYLEAVENWSDDEKIKTIIAIGEAGYSFDLGKDDPDQFEIDLYQLDNLKELAYQFVDEGLFGEIPEQIQHYLDYDAIACDLSMDYSEITIDGIRYIYRCD
211086..211421                     PHAGE_Brucel_BiPBO1_NC_031264: hypothetical protein; NAL212_0344; phage(gi100020)     1.67e-29            NitrosomonasspAL212MKATEPKTIIVYQDDKGKEPFTDWLNDLRDQKGRRFILKRIGRLEQGLYGDCRPVGEGVSELRIFFGPGYRIYFGEVDGRIIILLCGGDKDSQSRDIQDAKAYWKEYKDHG
211414..211743                     PHAGE_Burkho_phiE12_2_NC_009236: gp6, putative addiction module antidote protein; NAL212_0345; phage(gi134288715)     2.35e-07            NitrosomonasspAL212MAKRTYRQFRDVEEEYFRNHPEEIDAYLDEIFDEYAQDHNSAALLASLRVIAKVKGISNIAEETGLTRQGIQHALSSKGNPRFDNVNSIMNALGYRLVPEKIDSNDQHV
211895..212155                     addiction module antidote protein, CC2985 family; NAL212_0346                        N/A                 NitrosomonasspAL212MIEEYRYGNTKNTSVTLGEHFEKFLAHQIETGRYGSASEAIREGLRLLEEREAKLELLRHALAEGEKSGSSNYSLQNVLDELENEN
212299..213606                     PROPHAGE_Xantho_33913: IS1478 transposase; NAL212_0347; phage(gi77747808)            9.58e-81            NitrosomonasspAL212MLRNSSTIHQPNLFGTDLLMQLDPGDPLLKLASAIPWQEFEESFSLHYTAATGAPSKPIRLMVGLLVLKQLENLSDEAVVLQWKRNPYYQAFCGMKEFQRRLPCHSTELVHFRKRIGAEGVERIFRMSVGLHGRAALEDTVHIDTTVQEKNITYPTDSKLAIRIINRLNKIGKAHGVCQRRTFVKEVKSLRLAIRHFRHVTKRAKAKRALKRLRTIAGILIRELRRELPQHCLFERYQQDFLLYERVLAQQPKDKNKIYSLHEPQVYCVTKGKDHKQYEYGSKASIASTAQGNLIVGVVSHEQNQHDSHTLPEILRHVEASRGKAVKQAVCDRGYRGKREVDGTRIILPGKALKRDSRYQKDKKRKQCRRRAAIEPIIGHLKSDHRMARNYLKGTIGDRINLLMAAAAWNLKQWLLAIFWLFIPWRKLQNFPIFR
213576..213587                     attR                                                                                 N/A                 AAAGCTGCAAAA

#### region 2 ####
219663..219677                     attL                                                                                 N/A                 TTTTTGAAATGTCAA
232162..233715                     PHAGE_Anoxyb_A403_NC_048701: tail length tape-measure protein; NAL212_0363; phage(gi100057)     9.68e-24            NitrosomonasspAL212MTQQAVIYCRVSSPKQVTEGHGLASQETRCREYAKHKGYEVVEVFHDEGITGKLLDRPNMKAMLTYLKKNRAANPIVIIDDISRLARDIETHLRLRASIAAAGGKLESPSIAFGDDSDSRLIEHLLASVAAHQREKNAEQVLNRMKARMMSGHFVFNAPVGYRYDKVGKHGKLLVPDQPCASVITEGLEGFASGRFESQVELMRFFHSSPHFPKDRFGTVHMQRIKEILNRVLYAGYLDKPDWNIHLVKGHHEALISFETYQKIQARLKGEAKAPVRKDIREDFPLRGFVACACCGTPLTACWSRGRNGLHAYYLCHGKPNGIKCIQYGKSIRKVKLEGEFEALLSEMKPSKDMFFLAAELFADLWNVRRNDAKQETETIRRNLIQIERKTEQFLDRIAEADNSILITAYEKKIRKLEEEKIELDEKIAKCGRPLQSFDETFRTAFSFLSNPHKLWVSDRLEHRRAVLKLAFSERLRYCRNEGFRTPEKSLPFSLLEQNSVGKDGMVLLRGVEPPTY
complement(234768..235550)         PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposition protein; NAL212_0365; phage(gi557307613)     8.61e-61            NitrosomonasspAL212MNLQLQRILHACDVLKLPAIATEWSAMADRSAAQSNTFADFLDNLLQVEIEARRLRTREVLLKMAGLPAIKHFDDFDFHFATGAPRKQLQELTSLAFIERTENIVLLGPSGVGKSHLAIALAYSAIMRGIKVRFITAADLMLQLATAKKQGRLDTYLKRSVLSPKLLVIDEIGYLPFGREEANLFFNVIAKRYEQGSVIVTSNLPFSQWSTAFADDQTLTAALLDRLLHYAHIVQISGNSYRLKGKKSAGIAPTVEQVKQ
complement(235547..236569)         PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposase; NAL212_0366; phage(gi557307612)     2.95e-28            NitrosomonasspAL212MLTQEILVEIHVLHRQGKSIRSIAKALNVSRNTVRKYLRDIARTPTYSRRDDRPSKLEPFKTYLLERIEAARPEWIPATVLFRELQAKGYDGKAGIVRNYIRQFKATRTEPVRRFETPSGHQMQVDFTTIRRGRQKLKAFVATLGFSRATYVRFSEYERQEDWLSGIESALHYFGGVPKELLFDNAKCIMIERDAYGEGLHRWNAKLLGMAKDYGFNLKVCRPYRAKTKGKVERFNGYLKSCFITPLFASLKQAGLALDVDTANAQVGNWLHEVANQRIHATTNEKPQVLLEKERFSLQPLPEDMTSRLTSITIKQRQAIPVESFQHPLSVYDQLLEVMR
237161..237427                     PHAGE_Burkho_phiE125_NC_003309: hypothetical protein; NAL212_0367; phage(gi17975231)     8.56e-14            NitrosomonasspAL212MCKPYNLLIRSQAKKKLQSLPRTDRFRIAEKLEQLGRNPDDSSLDIKKLEGESYFRLKVGNWRVIFERHDAVRIIAIEKIKPRGDAYK
237424..237756                     helix-turn-helix domain protein; NAL212_0368                                         N/A                 NitrosomonasspAL212MTLQKIKSIQGKDEYILLPIAVYHTLKDQIEKELAAYETDQDAEQTYEPFVLEDYVDNPVALARLKAGITQEQLAQRLGVSQAYVSQLERRSHVTSKMLERVRTAINETK
complement(237777..238067)         hypothetical protein; NAL212_0369                                                    N/A                 NitrosomonasspAL212MNKKTTLPTSEDLDEAPVWTDDDFKQAVHRIGLKPLPQKKQKINITLDPDIVAWFKQQAGGRGYQTLINATLREAMQKKTIEETIRQVIKEVLRSS
complement(238036..238305)         PHAGE_Burkho_phiE202_NC_009234: gp6, pANL56; NAL212_0370; phage(gi134288760)         1.36e-14            NitrosomonasspAL212MNFTWNEVKRKASLKKHGLDFADAETVFAGYTLTKPDTRFAYSENRYSTIGLLGVEVVVIAHTETADEIHIISMRKAERHEQKNYFANL
238369..239088                     hypothetical protein; NAL212_0371                                                    N/A                 NitrosomonasspAL212MSRQLKVFNDHCLRVDMYLDDNPDYKTVWQLAHHWAGLDPEITDINAIPPALREHIIRLVIAIRNRVITARTRSGIVFADNSIITFFEDIPHYIKTRICLSWGVFNKSYLDSLYVKREEVIDLCIKSYCDFPPCWTPKRLPYESPAIKESKNYRPATETEDKIRCQAIASALWELDSAIHPVHMAQSTIMQRFGNGRDYGEETIKDWIKSVDPQKKRKKGAPPKIQYKIELIKDPQLED
239270..239464                     hypothetical protein; NAL212_0372                                                    N/A                 NitrosomonasspAL212MHNPLLTTKQAAQILGVSIAFLERDRWAGARVPFVKIGSRAVRYRHSDLLAYIESCTHYSTSEY
239472..241160                     PHAGE_Burkho_ST79_NC_021343: replication protein A; NAL212_0373; phage(gi509141618)     2.01e-107           NitrosomonasspAL212MHTSVHQPQELLSPGERIAEGILSFLDEPDGNDKRWRAPIFRQLPKRFAKIVAHDYKETYIFDGRQSANHGLLNAYGSITKNSIALNSSDDDLKDLAKNIVKEMRQISRIYLKLEHAVSRMLHRAQKYEIDLSSLEDPDITITGIYTRLTDETWWLQRLRKIHARKLEQDAIRLGLVHQRASRYVSDETLTRRREQKKRIRRVLDGLLATNELGQCFTLSELSELGLANPRIRRSELMVRIFGFEYIANELGHVGEFYTITCPSRMHARHSGSGERNTKYDGTTPKQAQKYLNKVWSRIRAKLKRDNFPVYGFRIAEPQHDGTPHWHLLLFMPSEQTERVREIMRHYALQTDGDEPGAQQHRFKATPIDKGKGSAVGYIAKYISKNIDGHGLEQDIDGSPIQEAAERVEAWASTWGIRQFQQIGGAPVSIWRELRRISSAPEGILEQAQQAADQGKWWQFIELMGGATAKREDNPIKLMKIDSKDRGKYGDPIGKKICGVETETIQLPTRLHQWHILKIAVDTETTEWLSAKRLSGSDNGSDREAAFAAQPPWSSVNNCTQL
241382..241396                     attR                                                                                 N/A                 TTTTTGAAATGTCAA

#### region 3 ####
complement(1602273..1602539)       PHAGE_Clostr_vB_CpeS_CP51_NC_021325: hypothetical protein; NAL212_1655; phage(gi509140075)     7.55e-25            NitrosomonasspAL212MTVYCVSYDLNKHGQNYGALYQELKNSFSWAHPLDSTWLISTSESAQQLTNRLRSHLDNNDTLLVIKVTSDYAGWLNQEQWNWLRNNI
complement(1602660..1603625)       PHAGE_Ralsto_RSS1_NC_008575: hypothetical protein; NAL212_1656; phage(gi118430720)     8.95e-23            NitrosomonasspAL212MIIILTATPGCGKTNHAVWSHIKPAVENERIVYVCGIPDLKLMHIKLSIAKLNTWAERTPIDETEPEGKQRLNNITEGSLIVVDEAAYPWPAIDLKDPPEHIKYLSQHRKHGLDFLVITQSPKFVHPFVLENADRHIHLSQEWSGNKQYEWSEYCANPKLKTNRANAVKKPYKLEKKAFDLYYSASLHVEKPKRAIPKMVYAAIFLLFAVPAMAMITYGRISDRLADPMQEIAANEEEKINLSAQEGETQPLSVIPVSQPVIALPSTKESLSMLSDAVDWSQVAACVSSKSNCICYGHQAQRLNIVPDTCNAAINYGWIIN
complement(1603622..1603915)       PHAGE_Ralsto_RSS1_NC_008575: putative minor coat protein; NAL212_1657; phage(gi118430719)     4.69e-06            NitrosomonasspAL212MFNLLIIPLGAFLTSSIGFLAVRALSGLGIGVISYAAITVALDALFSQAQGYFSAIPYFALQTLNLAGFGQGLGIIMGAITFRMTFVLLPKLGVIPK
complement(1603915..1605234)       hypothetical protein; NAL212_1658                                                    N/A                 NitrosomonasspAL212MANLHRLLTAIFFSLAFCSPAFSQSAPVGAIDLAGWIKNESGTYTKAFGESARVTLSSPPSGISTTSTALVNTSKGMQAFDIVKTAAVDVNRVGAAVGKLAQRVGPVGMTLTAVSLVCELTNICNDAGQWIFNNPYSDPVDYPQSTPVIFYIAGGINGTQSASASKSCKLVAGMQLAGSKTTLINETMCEERTSAGVFWRNVAVYTVNNGTCPPDYTKTGTTCQLNQNANSGPATATDWDSKTSQLNDDRFVPELISKGESVPSNVPTLPPDQKKGLGLESKPTRDSNGNVTGREDTTTEIEAVDAGTVDNPGRVIIKETQTTVKYDINNTQISSTTNTSYSSQPQPDKPQQNFEIKFDEVPPAELQTHNVQATLTGNSWGEGTCPPDIPIDISYYPMNLVIPTAPVCDTAEKINPLVLLLASIAGVYIVSGVRSTEVK
complement(1605287..1605598)       hypothetical protein; NAL212_1659                                                    N/A                 NitrosomonasspAL212MGYKYQSVCHDTLYDFHVAFAQNCHASGSQLGSIYLSCTADSGGYVVMQTYNASTGNPNTAWNYTPQAIPCEVSLINQTGFMWELALILIAGFTIRAIIKAFQ
complement(1605649..1605885)       Coat protein B; NAL212_1660                                                          N/A                 NitrosomonasspAL212MLQKSLDAVKLSVSAKQLVFLLFLLTLSLFMQAAAFAAVPEGVTTAITSAATDVATVGAAVILVHIGIKVWRWIRGAF
complement(1605962..1606258)       PHAGE_Ralsto_RSS1_NC_008575: hypothetical protein; NAL212_1661; phage(gi118430714)     1.24e-11            NitrosomonasspAL212MLEKVKVTGITFFKDTIDGKQIDSGAAFVEEHLNFQTGRAKGTATQKYPLGDAGKAQALMHLEFPLVCEVEFVRVTNGNVSKNIINSIKPLQQAKPAA
complement(1606334..1607344)       PHAGE_Entero_If1_NC_001954: hypothetical protein; NAL212_1662; phage(gi9630757)      7.11e-23            NitrosomonasspAL212MMNLIPVFVDYLTIRQVHDGGKLPVINGGRVLRIDSDGAIEYAVDTRQGLEGSFDSRVEVRCDGHQVEFSGNISRYGRTDNLFGYTFAGCIERINELLKSLDLPPFTSGKLYKFADSGWTWTGARVSRIDITCNYVTGSMIDSEALLRNMAGHHIGRQKGSLSVNGATVEYGRGSKYVYGKLYCKTTELKKHRSKKSGQHVTEEVIDFCQSLGVIREEFTLKSRFLLQNGLAYLGAITDSLLIEVYMNRTQLQRLENVKYENFNDLPPRLRATYVSWKYGYPIDLPISTFYRHRKALLAYGVDISIPNNVQTMPIKVKTIELAALTAPDWYIKKYA
complement(1607358..1607627)       hypothetical protein; NAL212_1663                                                    N/A                 NitrosomonasspAL212MRNVKNSYFRAILEVTNKGTLPEYSDLWRSYHPTALMLDSDYCLFTDSGRFEPTTSEEAITGQDSQKRLYVPVTRKVILTTEKKSQDLH
1607757..1608116                   hypothetical protein; NAL212_1664                                                    N/A                 NitrosomonasspAL212MEMKKYIELGEKKAGTQLKLAEYLGQYDSGLRAVKAGKKGLPDAICIKLADFIEVDRLEVIAASNLVTEKDEERRKLFESCFTTAASVGFLMLVVDNSGLLSYETGTSIMATAIYFVLC
1608367..1608795                   hypothetical protein; NAL212_1665                                                    N/A                 NitrosomonasspAL212MNNLIYGVDNEEIRKITGEDLKVIRKWKKGTREIPESALRLLKLYLAGDASALLGDEWKGYRFVDNLFYVPEWRNGFPPHEIRAMFWKVQQLWSLQREIELLKQELDRRNEDINTLEVRVNFYKRQLMLESPFGMILERTFS
complement(1609077..1611380)       PROPHAGE_Escher_CFT073: transposase/IS protein; NAL212_1666; phage(gi26248359)       1.06e-38            NitrosomonasspAL212MVMYAKIRRMYYREHLSINEIQRRTSLSRNTIKKWLKAPNDNAVKYQRAKKPGKLTLFESRLLLALEADARRPKKDRRTALMLFKEILSEGYTGGYSIVCDFIREWRNQGSQSKSVYVPLRFTLGEAFQFDWSEEWLVIGGIHRKVLAAHTKLCASRAFMLSGYPSQSHEMLFEAHTRAFTAFGGVSRRGIYDNMKTAVDKVSKGNGRIVNTRFFAMTAHYLFDPDFCNVASGWEKGVVEKNVQDMRRRLWNEAKQQQFSSFDDLNRWLETRCRALWSEIQHPDYAGITLADALEQEQLYLMPMPAPFDGYIEVLARVSSTCLVTLQRNRYSVPCRLANQMVAVHQYADRIEIVHNNAIAACHTRLLDSDQVSYDWQHYIPVIEKKPGALRNGAPFAELPVPLLQLQTALRRRERQQADRIMAKVLSLVPTHELEAVLVAVELVLESGVPSAEHVSNVLARLKHTDVPASVETTLKLNEEPQADTARYDRLNKQEVPHVCILAQFKALKLYGMASSYAELRQQSTPDVADSFNFADTLLNQLLQAETTERNLRSIRYQTQAARFPVQRHLQGFDFSQSKVDQQLIYQLATMEFTAAAQNLVLVGGTGTGKTHLAIAIGTSGIQHHNKKVRFFSAIDLANSLEQEKSTGKQGRLALRLLQIDLVILDELGYLPFSQAGGALLFHLLSRLYERTSVIITTNLAFAEWSNVFIDAKMTTALLDRLTHHCHIIETGNESFRYKQSSVTAKIRIQQREKEKYLPDENLANLQ

#### region 4 ####
1910877..1910896                   attL                                                                                 N/A                 TTTGTAACCGTTTTGTAACC
complement(1914603..1916012)       PHAGE_Xylell_Salvo_NC_042345: capsid decoration protein; NAL212_1964; phage(gi100066)     4.00e-15            NitrosomonasspAL212MNTSAQLESHHFDRQLKKADKSRFSIKLIKTAPENDLIYEPFGIANKDDYELALSIKEKGIQESLILSKDFILLSGHRRFNAAKYLRLGFVPVRFVEIVYSELSKKEKLEQLRLFNRQREKTPGESIREKLLEINPDEAYEALKRKRLLQHENILDANVSIGIVKKRSRITTKNFLQAAQKVISENKEYWPLTVRRIHYLLLNDPPLRHDKKSESRYCNDRSSYKALTDLLIRARLCRLIPHQSIEDSTRPIQLGGGFSSVQSFIDQEMNNFLLGYSRNLMQGQPHHVEIMLEKNALRSIIEKVARDYCIPVTTGRGYASYSPRYDICKRFKQSGKNKLILLMLTDFDPDGEEIAASFARSIRDDFGVRNIHPIKVALTSEDVTRNNLPSDLDAKPSSPNYKRFFQQHGSKAVELDAAPVELLQTKLRESIASVLDVEEFNAQIDLEREDASLIEAHRKMVLVNLRGAQ
complement(1916009..1916326)       hypothetical protein; NAL212_1965                                                    N/A                 NitrosomonasspAL212MLTQENTAKAQCMRILAYLYTKPLDTLSARKELDVMHPAARVMELRNQGIEIKTIWIDRASDCGKIHRIACYVLVGAGATAPTDTEDGINSKETDKEEHSTEGSI
complement(1916329..1916541)       PHAGE_Pseudo_PPpW_3_NC_023006: hypothetical protein; NAL212_1966; phage(gi564292530)     5.73e-05            NitrosomonasspAL212MQTVSNQFQPLEQITLAAVPTEQAAFYLNRRPQTLRIWAMKEDGLIRPIRINKRLAWPVKEIKKVLGLEV
complement(1916618..1917265)       hypothetical protein; NAL212_1967                                                    N/A                 NitrosomonasspAL212MDYLLLKLLIAQVNDDLKDLLQVNLFSLNAFGEGETEINGNPLSKSEERLLNASALARSILDNPPVYSFQTARQRAAAELLYYWGRLLQPPETQPNHKNLLFKSIRNYIACLGENEARPFSCLLDDVQEETKSQTKTTKPQERQNEILRIICDELKLDPLNLPPRILGKRWIRAEVKDKLKIPNKLFTESNFEKTWECLRKLKLIKEASDPFPYK
complement(1917384..1918160)       hypothetical protein; NAL212_1968                                                    N/A                 NitrosomonasspAL212MANCDYRTVSDHNIIRSCFKLPKLRIPENIEESVDGYLSFKIENASGVIKVTSAGWRVGIWKCRGDISALIAAGFIQGEWCPGLPGNNKTRQAISFQTGAPRLVNGTHRGKALPAPNIVIIRTSKNKFEVELPATKEQKKLITQARERGRERWLHEQKLTEHNKKLNKKRDVIKPIPAKYSIPIIFKESAIKYLNIGIKPALRELRGEYQFEDYGQMMICIEDQSAQDILCAIARLKETIRKAKVVCSKKQSHLSIVN
complement(1918268..1918555)       PHAGE_Burkho_phiE202_NC_009234: gp7, pANL12; NAL212_1969; phage(gi134288781)         1.93e-13            NitrosomonasspAL212MQKYLTTKSGRKILLNTPEEDAQITAAALTDPDNPPLTDEELQQFKRARGRPQGSGKKEQVTLRIDTEILEQFRATGNGWQTRINDALRDWIKQH
complement(1918533..1918808)       PHAGE_Burkho_phiE202_NC_009234: gp6, pANL56; NAL212_1970; phage(gi134288760)         1.32e-06            NitrosomonasspAL212MKVICDAAKDAINKEKHGVSLTEAVFIDWDDALIWQDMRREYGEIRMIALAPIGERLYCVVYVDHENNRRIISLRKANNREKRHYAKVLND
complement(1918862..1920166)       PROPHAGE_Escher_Sakai: putative prophage Sf6-like integrase; NAL212_1971; phage(gi15832485)     6.29e-10            NitrosomonasspAL212MAKIKFTVGRVTGFKCPDDVAQAFLWCDEVPGLAVRATPGSSRNRYIFQSKVKKQTIRITIGDVAIWTIGNAQIEARRLQTIIDQGNDPREVKADQYAAKTAATAAKKAQEEREIVTVGQAWKEYVTARKPLWSELHIRDHEKVMQAGGDARKRSKKLTEPGSLATLAKIRLVDLTPELVTEWAQTEAMTRPTRARLALRLLRAFLNWCGRHSTYKAIVTSNPAQNNDARESLGKAKVKHDVLQREQLPAWFKAIKQIQNPVISAYLQILLLTGARREEIASLRWQDIDFQWKSLTINDKVDDFRIIPLTPYVANLLSTLTRRNEWVFSSPSAASGRLTDPSIAHRKACAIAGLDLTLHGLRRSFASLCEWIEMPSGIAAQIQGHKPQGVREQNYIRRPLDLLRVWHVKIEEWILQEAGINFVSTQAGLRVVKK
1920182..1920201                   attR                                                                                 N/A                 TTTGTAACCGTTTTGTAACC
1921028..1922050                   PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposase; NAL212_1973; phage(gi557307612)     2.95e-28            NitrosomonasspAL212MLTQEILVEIHVLHRQGKSIRSIAKALNVSRNTVRKYLRDIARTPTYSRRDDRPSKLEPFKTYLLERIEAARPEWIPATVLFRELQAKGYDGKAGIVRNYIRQFKATRTEPVRRFETPSGHQMQVDFTTIRRGRQKLKAFVATLGFSRATYVRFSEYERQEDWLSGIESALHYFGGVPKELLFDNAKCIMIERDAYGEGLHRWNAKLLGMAKDYGFNLKVCRPYRAKTKGKVERFNGYLKSCFITPLFASLKQAGLALDVDTANAQVGNWLHEVANQRIHATTNEKPQVLLEKERFSLQPLPEDMTSRLTSITIKQRQAIPVESFQHPLSVYDQLLEVMR
1922047..1922829                   PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposition protein; NAL212_1974; phage(gi557307613)     8.61e-61            NitrosomonasspAL212MNLQLQRILHACDVLKLPAIATEWSAMADRSAAQSNTFADFLDNLLQVEIEARRLRTREVLLKMAGLPAIKHFDDFDFHFATGAPRKQLQELTSLAFIERTENIVLLGPSGVGKSHLAIALAYSAIMRGIKVRFITAADLMLQLATAKKQGRLDTYLKRSVLSPKLLVIDEIGYLPFGREEANLFFNVIAKRYEQGSVIVTSNLPFSQWSTAFADDQTLTAALLDRLLHYAHIVQISGNSYRLKGKKSAGIAPTVEQVKQ

#### region 5 ####
complement(2401864..2402658)       PHAGE_Bacill_G_NC_023719: gp245; NAL212_2422; phage(gi593777701)                     8.42e-09            NitrosomonasspAL212MIVNNSKTLLVVQGLRASINGTEILRGIDLTIKSGEIHAIMGLNGSGKSTLAKVLAGHAAYEITAGTVRFEDKDLLEMAPEDRARAGLFLAFQYPIEIPGVANTQFLRLAYNTIQAQRGKEELDPLEFDDFVREKMKLLDMNPDFLDRSVNEGFSGGEKKRNEILQMALLEPKLSILDEMDSGLDIDALKTVANGVNHITNKDNATILVTHYQRLLDYVVPDFVHIMQSGHIVLTGGKELALELETRGYDWVTANKRSIAGAIA
complement(2402655..2404091)       FeS assembly protein SufB; NAL212_2423                                               N/A                 NitrosomonasspAL212MSAVLQSLVNQPYKHGFVTKIESDVAPKGLNEDIIRLISAKKNEPEWLLSFRLEAYQKWLTMKEPEWQNVHYPKIDFQAISYYSAPKPKKKLASMDEVDPELLRTFEKLGVPMHERAALAGVAVDVIFDSVSVATTYKQKLAEVGIIFCSISEAVHNHPELIQRYLGTVVPVGDNYFAALNSAVFTDGSFCFIPKGVKCPMDLSTYFRINTEGSGQFERTLIIAEEDATVSYLEGCTAPRFDTNQLHAAVVELVALDNADIKYSTVQNWYAGDENGIGGIYNFVTKRGLAKGKNSRISWTQVETGSAITWKYPSCILRGDNSVGEFYSVAVTNNYQQADTGTKMIHLGKNTRSTIVSKGISAGHSNSSYRGLVRISPTAEGARNYSQCDSMLIGDQCGAHTFPYIQVHNNSAIVEHEASTSKIGEDQLFYFSQRGIDAEEAVSMIINGFCKDVFQQLPMEFAVEATKLLSFKLEGSVG
complement(2404221..2404556)       iron-sulfur cluster assembly accessory protein; NAL212_2424                          N/A                 NitrosomonasspAL212MLITLTENAAKYIQQQLAKRGKGLALRVGIKKSGCSGFSYTFDYADEINPDDELFESYKTKIVVDRYSLPYLDGSQIDFVKEGLNSSFQFVNPNIDNTCGCGDSFSIKESV
complement(2404705..2405193)       PHAGE_Vibrio_12A4_NC_021068: hypothetical protein; NAL212_2425; phage(gi481019116)     6.63e-11            NitrosomonasspAL212MRLTTKGRFAVTALLDLALQQSSHPITLADISQRQKISLSYLEQLFAKLRQSELVDSVRGPGGGYCLSKDLDKVSIADIILAVDEPIDATQCGGKENCHNDGKCMTHDLWAKLNELIFEYLGAVTLKELVDNQINQQNEAIVPLLDMRREADIRRETTVAYS
complement(2405330..2405440)       hypothetical protein; NAL212_2426                                                    N/A                 NitrosomonasspAL212MRFDSRLTVSGKPGAIHSNVSTIDRFDCWIILEAVD
complement(2405430..2406329)       PROPHAGE_Xantho_306: transposase; NAL212_2427; phage(gi21243165)                     6.50e-130           NitrosomonasspAL212MVTFIDSNKAKYGIEPICRQIQIVPSSYYEHKRCERDPNRLPDRIRRDMKLELEIQRVWENNFRVYGARKIWRQLIREGTRVARCTVERLMKKLGIQGIKRGKKCWTTISDDSLYRPADKVNRQFTAIRPNQLWVADITFVATWTGFVYVAFIIDVFARCIVGWRVSRSLHTDLVLDALEQALWARREIKGLIHHSDHGTQYLSIRYTERLTEANIEASVGSIGDSYDNALAETINGLYKTEVIRHRGPWRSIEEVEFATLEWVDWFNNRRLLEPIGNIPPAEFEMAYYRQLEESADAV
complement(2406329..2406649)       PROPHAGE_Escher_Sakai: putative transposase; NAL212_2428; phage(gi15832212)          6.55e-39            NitrosomonasspAL212MKNQISYSPEVRERAIRLVLEQQKEHESQWSAIKSIASKIGCTAETLRTWVRRAETDQGIRCGMSTSDRERLKELERENRELKRANEILRKASAYFAQAELDRRPK
2406689..2406700                   attL                                                                                 N/A                 GGGGCGATTCAT
2406689..2406700                   attL                                                                                 N/A                 GGGGCGATTCAT
2406960..2407781                   PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposition protein; NAL212_2430; phage(gi557307613)     2.37e-51            NitrosomonasspAL212MTDTSIPTTVAPQVLLVNHFKTLKLPTFAREYEKVGIECARDDVDYARYLLRLCELESIDRERRNTERRIRLAKFPVTKSLDTFDFAAIPGLNKPLVLELMRGEWIDKRENIIALGPSGVGKTHVALALGLAACQKGMSVSFTTAAALVHELMEARDEKRLRTLQKQLTNVKLLIIDELGYVPFTAVGAELLFEVFSRRYEHAATLVTSNLPFDEWTSVLGSERLTGALLDRLTHHVHILEMNGESYRLATSKKRQKQAMQSRSTEKENLKPI
2408068..2408637                   hypothetical protein; NAL212_2431                                                    N/A                 NitrosomonasspAL212MDNISYINHKVKYGLINNQAVIVIVHAKQRKQITEELSTNNFDIEEVKSKGQIKFLDAGLFLSNFIFDDEHLDTQSLKTHLSHTITNSKLHFDHVLVIDGIVDLLLKRGNHESAVLLEEQLHDIALQQGFSIFIYGSGVNVVSAEENSKSSIMTSLGNSVMNGLETAGNTLENLATSSTTELKSFSPPV
complement(2408713..2409336)       PHAGE_Acinet_WCHABP12_NC_041924: hypothetical protein; NAL212_2432; phage(gi100021)     1.25e-16            NitrosomonasspAL212MKNLSHQVIDWLEKSNLVNVADIGIETLMLVSKFGQLTTVITKGKECREEIGNCLINMIIICIMSKVSFADCLDHSIKIKEENLNDPQYILLKIYNIIGELSGDIANKDKINKEIWNLLAYLTILAALNNSSLLECLEISFKKIQSKKIIRFNGNILEETHEDYPVALAMMKATTKKPKKLIGNLASVAQESSGNQAGNNNSKNLTE
2409655..2409810                   hypothetical protein; NAL212_2433                                                    N/A                 NitrosomonasspAL212MLIQDNIFEFEFTDSNSYFDNPALLYEVPPLEVHTEEIFNYCGDIYHIEEG
2409838..2410089                   hypothetical protein; NAL212_2434                                                    N/A                 NitrosomonasspAL212MFLILLISKENKNMKNMKNVRNNTKILVEKNNHVSELPMIGSMNFMPSGFPQKKYYKNSNFSKTKNISHFYGKYQPFIKYIPS
2410297..2411277                   PHAGE_Burkho_KS5_NC_015265: ISBmu23 transposase; NAL212_2435; phage(gi327198044)     3.82e-14            NitrosomonasspAL212MKKREQGNLFLTLDALVPLDHPYRKLDQLLPFDKLSLAYRGLYSPKGRKEKGFEFGLRALIIQFMEDLSDREMERYLQENLACKWFCDMNLGEAAPDHSYFGEFRKRLGTGRLMDIFSQVRNGLQGMGLIREIFTFVDASQLISKLTTWDDRDRAIKQGVEQFNNETAGKVAADKQARFGCKGKNKYWFGYKEHVSVDMQSGLINKVAATSAEVTDAHGFQHVCPNGGAVYADKGYGLNPVKITLKRKGCHDGTIKKNNMKEKNRDKDRWLSAIRAPYERVFAHRNKKVRYRGLVKVQFQVGIRALVFNLKRLMTLGVDRITLCHT
2411378..2412235                   PROPHAGE_Escher_MG1655: IS30 transposase; NAL212_2436; phage(gi16132105)             5.06e-75            NitrosomonasspAL212MSVFCLSQLFWVSRQAHHQQETMWQLWSQGKSLSEIGRQLNKHAGSVFCYLQKSGGIKPSPSKRSARDLSLLEREEISRGLSANLSFRAIARNLNRASSTVSREINRNGGLSKYRAVSADRRAWMKAKRPKTCKLNDDANLRAIVSDKLASKWSPEQVAGWLKQTYPKASAMHISHETIYKTLFIQSRGALKKELLRQLRTQRVMRQSKHFNTKGNARGGIIDAVSIHDRPQEVNDRIIPGHWEGDLICGTQKSYIATLVERSSRYTLLVKLTGNDTHAVVSTIT
complement(2412373..2413446)       PROPHAGE_Xantho_33913: IS1479 transposase; NAL212_2437; phage(gi21229605)            4.04e-26            NitrosomonasspAL212MQMSFGTLELAERLKRDNILMKIDALIDWEELRPKLRGLYKRELSHGGGQEPFDALMMFKAILLGQWHSLSDAALEQALSVRIDFLQFCGLSLSDAIPDETTLCRFRNRLVSGDRLDNLLASINEQLQSYGLMIKGATGAVIDATLIESAARPKKTITLEMDAEGKAVQFEDGSQPGISCTEEQSADPDATWLKKGKKSQFGYRSYLVVDAQDGYVRGVHTAPANQSEMIHFEAAIDVAHIEANRVYADKGSASNANRRFLRKQKIKSAIMHRAYKNKPLSSRQKLANQLISKKRYIVEQCFGTIKRLFKMGRASYFGTVKVNAQVILKSICMNLKKAANKIFVDQPLRGAVRPNVA
2414527..2414551                   attL                                                                                 N/A                 TGAATCGCCCCGGGTTTTCCGGAGA
complement(2414566..2415465)       PROPHAGE_Xantho_306: transposase; NAL212_2441; phage(gi21243165)                     6.50e-130           NitrosomonasspAL212MVTFIDSNKAKYGIEPICRQIQIVPSSYYEHKRCERDPNRLPDRIRRDMKLELEIQRVWENNFRVYGARKIWRQLIREGTRVARCTVERLMKKLGIQGIKRGKKCWTTISDDSLYRPADKVNRQFTAIRPNQLWVADITFVATWTGFVYVAFIIDVFARCIVGWRVSRSLHTDLVLDALEQALWARREIKGLIHHSDHGTQYLSIRYTERLTEANIEASVGSIGDSYDNALAETINGLYKTEVIRHRGPWRSIEEVEFATLEWVDWFNNRRLLEPIGNIPPAEFEMAYYRQLEESADAV
complement(2415465..2415785)       PROPHAGE_Escher_Sakai: putative transposase; NAL212_2442; phage(gi15832212)          6.55e-39            NitrosomonasspAL212MKNQISYSPEVRERAIRLVLEQQKEHESQWSAIKSIASKIGCTAETLRTWVRRAETDQGIRCGMSTSDRERLKELERENRELKRANEILRKASAYFAQAELDRRPK
2416212..2417030                   PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposition protein; NAL212_2444; phage(gi557307613)     5.20e-37            NitrosomonasspAL212MPHVCILAQFKALKLYGMASSYAELRQQSTPDVADSFNFADTLLNQLLQAETTERNLRSIRYQTQAARFPVQRHLQGFDFSQSKVDQQLIYQLATMEFTAAAQNLVLVGGTGTGKTHLAIAIGTLGIQHHNKKVRFFSAIDLANNLEQEKSTGKQGRLALRLLQIDLVILDELGYLPFSQAGGALLFHLLSRLYERTSVIITTNLAFAEWSNVFIDAKMTTALLDRLTHHCHIIETGNESFRYKQSSVTAKIRIQQREKEKYLPDENLANLQ
complement(2417249..2418334)       transposase IS116/IS110/IS902 family protein; NAL212_2445                            N/A                 NitrosomonasspAL212MGGLKMSNNHHGIVGGVDTHKDLHFAAVVDAHDRVLASSSFPTTRQGYKSMLNWMQSFGEVKRIGVECTGTYGAGLLRYLQQFGIEILEVTAPDKTDRRKRGKDDAIDAENAAHAAFAGIRTVTPKTRDGMVESLRVLKVCRKTAIAARRIALQMIQMNIISAPEAIRESLRTMTRMQLIRNLAAWRPDLGGYRDVSTAYKIALKSLARQYLELHDEIADLDVMISGIVDELAPELIASKAIGYESAAQLLITAGDNPERLKSEASFAALCGVNPIPASSGKINRHRLNRGDDRAANSALHIIAIGRLRIDVKTKEYVEKRLSQGHTKLEALRCLKRYIAREVYFILRKRNNTINSTQIAA
2418408..2418432                   attR                                                                                 N/A                 TGAATCGCCCCGGGTTTTCCGGAGA
complement(2418447..2419346)       PROPHAGE_Xantho_306: transposase; NAL212_2446; phage(gi21243165)                     6.50e-130           NitrosomonasspAL212MVTFIDSNKAKYGIEPICRQIQIVPSSYYEHKRCERDPNRLPDRIRRDMKLELEIQRVWENNFRVYGARKIWRQLIREGTRVARCTVERLMKKLGIQGIKRGKKCWTTISDDSLYRPADKVNRQFTAIRPNQLWVADITFVATWTGFVYVAFIIDVFARCIVGWRVSRSLHTDLVLDALEQALWARREIKGLIHHSDHGTQYLSIRYTERLTEANIEASVGSIGDSYDNALAETINGLYKTEVIRHRGPWRSIEEVEFATLEWVDWFNNRRLLEPIGNIPPAEFEMAYYRQLEESADAV
complement(2419346..2419666)       PROPHAGE_Escher_Sakai: putative transposase; NAL212_2447; phage(gi15832212)          6.55e-39            NitrosomonasspAL212MKNQISYSPEVRERAIRLVLEQQKEHESQWSAIKSIASKIGCTAETLRTWVRRAETDQGIRCGMSTSDRERLKELERENRELKRANEILRKASAYFAQAELDRRPK
2420417..2421571                   PROPHAGE_Escher_MG1655: IS30 transposase; NAL212_2449; phage(gi16132105)             1.22e-132           NitrosomonasspAL212MNHQPSKRSFTYHQQETMWQLWSQGKSLSEIGRQLNKHAGSVFCYLQKSGGIKPLPSKRSARDLSLLEREEISRGLSANLSFRAIARNLNRASSTVSREINRNGGLSKYRAVSADRRAWMKAKRPKTCKLNDDANLRAIVSDKLASKWSPEQVAGWLKQTYPKASAMHISHETIYKTLFIQSRGALKKELLRQLRTQRVMRQSKHFNTKGNARGGIIDAVSIHDRPQEVNDRIIPGHWEGDLICGTQKSYIATLVERSSRYTLLVKLTGNDTHAVVSAITQKVIELPQQLKKSLTWDRGMELAQHKLFTIDTDIKVYFCDPKSPWQKGTNENTNKLLRQYMPKKTDLSVYSQEQLDMMAEELNDRPRKTLNFLSPSQKISAVLQ
2421904..2421915                   attR                                                                                 N/A                 GGGGCGATTCAT
complement(2422039..2422251)       hypothetical protein; NAL212_2451                                                    N/A                 NitrosomonasspAL212MKLTKPLTDQELEAWENSRNLEAELLKSVRQMIARKGRVVFSCDTFVNMPLYHFQFHLSMSQTRIEKSRW
complement(2422299..2422607)       transcriptional regulator, XRE family; NAL212_2452                                   N/A                 NitrosomonasspAL212MPMTEKELKKRDEERDLGAELLESVKQMKAGRAGRIHKIEVSPVVSARIKSGLSQTDFAKLLGVSVRTLQDWEQGRRQPSGAAKTLIAIAERRPDVLKEIAV
complement(2422598..2422912)       hypothetical protein; NAL212_2453                                                    N/A                 NitrosomonasspAL212MYTIAETEVFSRYVRDYWTEEERAAFAVWIAEHYDTGDIVPGSGGCRKVRWSRKGKGKSGGLRVIYYNTLEDGTIWLLLIYAKNKHENIPAHLLKAIKEKILCP
complement(2422854..2423993)       PHAGE_Butyri_Arawn_NC_048848: hypothetical protein; NAL212_2454; phage(gi100026)     1.89e-07            NitrosomonasspAL212MKNQISYKLLGHIAMGRNPPAEKKYEALQGTTLEQAFNDFIAVRKKLKVRTLYDYQRIMKTVFADWQNKTMLEIGKDMVAKRHSKIGTEHGETYANLSMRFLRALFNFAIAQYEDGNGNSILRENPVTRLTQTRAWYRVDRRQTVIKPHELEPWFHAIMNLKNDPLSQDRETIRDYLLLVFFTGLRREEAASMIWDNVDLQAKTLKVIDTKNHLDHTLPLSDFLYDLLQQRKNKATNDYVFQRANGTGYVSEQRKHMAKVIKESGISFTIHDLRRTFLTIAESLDISAYAVKRLANHKMSNDITAGYIVADVERLGQPMQKITDYILKRAGYKPSATVTDLSEKNRTKYLDFIRHCRNINHVYHRRNRSFQPLCQRLLD
2424033..2424044                   attR                                                                                 N/A                 GGGGCGATTCAT

#### region 6 ####
2417192..2417218                   attL                                                                                 N/A                 TCGTTAGTGGGTCAGTTTTACATTGTT
2424031..2424043                   attL                                                                                 N/A                 CCGGGGCGATTCA
complement(2430922..2432739)       PHAGE_Bacill_WBeta_NC_007734: putative site-specific recombinase; NAL212_2462; phage(gi85701406)     5.76e-28            NitrosomonasspAL212MKKVAIYARYSSDLQSDASIEDQIRICNERAKHENWKVVNTYTDHGISGASLMRPGIQMLMQDAMANKFDIVLAEGLDRLSRDQQDIAGIYKRFQFVGIAIHTLSDGGEVSDIHIGLKGTMNALFLKDLAAKTHRGLSGRIEKGKSGGGLCYGYNVVKQFDSYGEAIRGDREINKEEAEIVKQIFRDYAAGVSPKKIALNLNKKGIPCPSGKAWGATTIYGNRRRGTGIINNELYIGRLIWNRQKFLKDPDTGKRVARPNPEEDWIITEVPHLRIIDEELWEQVKIRQKALDEKPQFWAKQRPKNLFSYLLTCGCCGSGMSKVSADRYGCSAARNKGTCSNRLTIKQESLEHTILEALQHHLMNPELVKVFCEEYTKHINELRQTRNAAINRYKKELQKLAADKEKIIEAIKNGIPASEVKDALNKIIERREELESYLEGKEEAPVLLHPNMSQRYQKEVEALRVSLNREETRTEAADLLRGLIDKIVLTPKASGTEYAIDLHGDLAGILTVAAGKQQKISDYDPLLQQVKMMTESGDQKHGWQEDSNADEISSKEDLSDKNEMVNLNARSSRKAELAEKPHETAILSKDKMVAGAGFEPTTFGL
complement(2433110..2433376)       hypothetical protein; NAL212_2463                                                    N/A                 NitrosomonasspAL212MSDSSDKNKSRLPSHIAYSVEEGSNDKNHWHKIGAAWPTKEGGLSLQLNALPLNGRIALRSREELERMRAERQQAPKQNQAQDINFTQ
complement(2433373..2433636)       hypothetical protein; NAL212_2464                                                    N/A                 NitrosomonasspAL212MNVITKAMLDQLRAERMRKNAQLDYTIGGPIQACVVSTIEKERETKIKQGENILQNALHDMEREQALSSHKGLAKVHFNHSKQEIEP
complement(2433647..2434129)       hypothetical protein; NAL212_2465                                                    N/A                 NitrosomonasspAL212MSSEINKLKDGDVVHVKTFGSRKDTLNLLNPTFEISRRLKPNKVASIVAQYIQSLPEQKEASQSSTNLVAWLEFTSEFNCAENSQILVITDGLESSSYVDGNQLLQAKKSLPKAEVNLKGCALTFYGLGAGWMPQQVKFVRKEWERWAEQAGASFTAIIP
complement(2434299..2435279)       PHAGE_Burkho_KS5_NC_015265: ISBmu23 transposase; NAL212_2466; phage(gi327198044)     3.82e-14            NitrosomonasspAL212MKKREQGNLFLTLDALVPLDHPYRKLDQLLPFDKLSLAYRGLYSPKGRKEKGFEFGLRALIIQFMEDLSDREMERYLQENLACKWFCDMNLGEAAPDHSYFGEFRKRLGTGRLMDIFSQVRNGLQGMGLIREIFTFVDASQLISKLTTWDDRDRAIKQGVEQFNNETAGKVAADKQARFGCKGKNKYWFGYKEHVSVDMQSGLINKVAATSAEVTDAHGFQHVCPNGGAVYADKGYGLNPVKITLKRKGCHDGTIKKNNMKEKNRDKDRWLSAIRAPYERVFAHRNKKVRYRGLVKVQFQVGIRALVFNLKRLMTLGVDRITLCHT
complement(2435318..2435473)       hypothetical protein; NAL212_2467                                                    N/A                 NitrosomonasspAL212MKKILTMIPLVCAAAIADAKTLTIGIDLSASNPLLSHKNFAHGTVGKLSRN
complement(2435877..2437031)       PROPHAGE_Escher_MG1655: IS30 transposase; NAL212_2469; phage(gi16132105)             6.62e-133           NitrosomonasspAL212MNHQPSKRSFTYHQQETMWQLWSQGKSLSEIGRQLNKHAGSVFCYLQKSGGIKPSPSKRSARDLSLLEREEISRGLSANLSFRAIARNLNRASSTVSREINRNGGLSKYRAVSADRRAWMKAKRPKTCKLNDDANLRAIVSDKLASKWSPEQVAGWLKQTYPKASAMHISHETIYKTLFIQSRGALKKELLRQLRTQRVMRQSKHFNTKGNARGGIIDAVSIHDRPQEVNDRIIPGHWEGDLICGTQKSYIATLVERSSRYTLLVKLTGNDTHAVVSAITQKVIELPQQLKKSLTWDRGMELAQHKLFTIDTDIKVYFCDPKSPWQKGTNENTNKLLRQYMPKKTDLSVYSQEQLDMMAEELNDRPRKTLNFLSPSQKISAVLQ
2437138..2438037                   PROPHAGE_Xantho_306: transposase; NAL212_2470; phage(gi21243165)                     6.50e-130           NitrosomonasspAL212MVTFIDSNKAKYGIEPICRQIQIVPSSYYEHKRCERDPNRLPDRIRRDMKLELEIQRVWENNFRVYGARKIWRQLIREGTRVARCTVERLMKKLGIQGIKRGKKCWTTISDDSLYRPADKVNRQFTAIRPNQLWVADITFVATWTGFVYVAFIIDVFARCIVGWRVSRSLHTDLVLDALEQALWARREIKGLIHHSDHGTQYLSIRYTERLTEANIEASVGSIGDSYDNALAETINGLYKTEVIRHRGPWRSIEEVEFATLEWVDWFNNRRLLEPIGNIPPAEFEMAYYRQLEESADAV
2438064..2438076                   attR                                                                                 N/A                 CCGGGGCGATTCA
2438079..2438471                   hypothetical protein; NAL212_2471                                                    N/A                 NitrosomonasspAL212MAPEHGIVLSQDDPVLMMHTLNEVLLEQNEKAHAELLSNYQAILEENFNRWCEYSTKKSNAIISASMSNAQLTRDQFMESCIQLIDERIKSGVDQETYDLARVSRQAAIINLMASTLFLVSVVIIFLILL
2438502..2438831                   PHAGE_Entero_c_1_NC_019706: excisionase; NAL212_2472; phage(gi428781760)             6.73e-05            NitrosomonasspAL212MKTLNLSEAAQFLKLHPEEVRRRAKAGIIPGAKLGKRWAFIDDDLADHIRSLYACTRQALQVGHEEKQLCHSVNVVRRGGLVSPHQAASELDALLQLKTKPKHKNSTIS
complement(2439151..2439933)       PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposition protein; NAL212_2474; phage(gi557307613)     8.61e-61            NitrosomonasspAL212MNLQLQRILHACDVLKLPAIATEWSAMADRSAAQSNTFADFLDNLLQVEIEARRLRTREVLLKMAGLPAIKHFDDFDFHFATGAPRKQLQELTSLAFIERTENIVLLGPSGVGKSHLAIALAYSAIMRGIKVRFITAADLMLQLATAKKQGRLDTYLKRSVLSPKLLVIDEIGYLPFGREEANLFFNVIAKRYEQGSVIVTSNLPFSQWSTAFADDQTLTAALLDRLLHYAHIVQISGNSYRLKGKKSAGIAPTVEQVKQ
complement(2439930..2440952)       PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposase; NAL212_2475; phage(gi557307612)     2.95e-28            NitrosomonasspAL212MLTQEILVEIHVLHRQGKSIRSIAKALNVSRNTVRKYLRDIARTPTYSRRDDRPSKLEPFKTYLLERIEAARPEWIPATVLFRELQAKGYDGKAGIVRNYIRQFKATRTEPVRRFETPSGHQMQVDFTTIRRGRQKLKAFVATLGFSRATYVRFSEYERQEDWLSGIESALHYFGGVPKELLFDNAKCIMIERDAYGEGLHRWNAKLLGMAKDYGFNLKVCRPYRAKTKGKVERFNGYLKSCFITPLFASLKQAGLALDVDTANAQVGNWLHEVANQRIHATTNEKPQVLLEKERFSLQPLPEDMTSRLTSITIKQRQAIPVESFQHPLSVYDQLLEVMR
2441023..2441049                   attR                                                                                 N/A                 TCGTTAGTGGGTCAGTTTTACATTGTT
2441058..2441708                   PHAGE_Salmon_ST64T_NC_004348: integrase; NAL212_2476; phage(gi24371538)              5.94e-74            NitrosomonasspAL212MATIRAILRRAALDWEWIEKAPFIRLYKEPKRRIRWIAPEQVQILLNELPEHLVDLVKFSLSTGLRKRNVTDLEWSQVDLQRNVAWIHADQAKARKSIHISLNATAMEVLRKQVGKHSLRVFTYQGKPIIQVNTRAWRKALRRAGIEDFRWHDLRHTWASWLTQKGVPLNVIQEMGAWESTEMVKRYAHLAPEQLRKHAMVVDEILNDTILTQVEN
complement(2441743..2441818)       tRNA                                                                                 N/A                 GCCGGCATAGCTCAGATGGTAGAGCAGCTGATTTGTAATCAGAAGGTCCCGAGTTCGATTCTTGGTGTCGGCACCA
complement(2441859..2442281)       PHAGE_Pseudo_pf16_NC_041881: hypothetical protein; NAL212_2477; phage(gi100017)      2.45e-21            NitrosomonasspAL212MTISSTKPYLVRSIYDWCIDSGFTPYISVQAFPELNVPKEYIKENEIVFNISINAVNELIINNNIVGFAARFNGVERKLKIPMNAINSIFAKEVNQGITFSDEKRENQKAMNVLKNNNSNQDPEILQERKVRKPKLRVIK

#### region 7 ####
2478834..2478845                   attL                                                                                 N/A                 AATATTTCTTTA
complement(2485164..2485805)       PHAGE_Agroba_Atu_ph07_NC_042013: ATP-dependent Clp protease proteolytic subunit; NAL212_2517; phage(gi100676)     1.61e-71            NitrosomonasspAL212MAQIFDNIRDMEPKNLGLIPMVIETSGRGERAYDIYSRLLKERVVFLVGPVTEASANLVVAQFLFLESENSEKDIFFYINSPGGMVSAGLAVYDTMQYIKPDVSTLCIGQAASMGALLLTAGAKGKRYCLPNSRVMIHQPLGGFQGQASDIEIHAREILYLKSRLNEIMAKHTERPVSDLEKDTDRDNFMSATESVNYGLVDAVLSSRNDGAN
complement(2485807..2487111)       trigger factor; NAL212_2518                                                          N/A                 NitrosomonasspAL212MESKVENLGALERRFDISISLEKLQDEINLRLKKLAKTTKFHGFRPGKVPLTIVKQMYGVQVQQDVINDAIHKEFTDTVKENNLKIAGYPRFENKSTNEQDALYTVSATFEVYPEIILGDLSNQSVDQLDVRVDEVDIDKTIDMISKQRVTYQPVSRAAIKGDRVKIDYHGVINGDDFAGGKADDVQLILGDGKFLKDFESSLIGMKVGNHKSFDVVFPQEYHGKDVAGKSVTFEVKMNELEMPILPSVDEEFAKSLGVPDGDLKKLREGIKKDLEREISKRSRSKLKEQVMRAILETTQIEAPIVLVNQELERLLQDAKSDLEARGIKANEISLKTELFKDKAEYRVKLGLILAELVKVHSIKNNPAHVRSIIENAAQSYENPEQVVKWHYASPERLQEAESLALEENIVDWALGQVKLINKTVTFDELMGIS
complement(2487206..2487290)       tRNA                                                                                 N/A                 GCGAAAGTGGCGGAATTGGCAGACGCACCAGATTTAGGTTCTGGCGCCGAGAGGTGTGGGGGTTCGAGTCCCCCCTTTCGCACCA
complement(2487365..2488111)       short-chain dehydrogenase/reductase SDR; NAL212_2519                                 N/A                 NitrosomonasspAL212MDKLENYSAPQDLLKDRVILVTGAGQGLGRAAALSYANHGATVILHGRKVKKLESVYDEIETIGKAQALIYPLDLERAEEKDFFALAHAIAQQLGRLDGILHNAAYLPGLSPLEHQTTEHWQALLQVNLIAPFALTKACLPLLKVSPDASIIMTSSTQGHNPSAYWGGFAVAKAGLEALVKIQADEWSQMSNLRINTVIPGLVNTPQRVITHPGEIKQKMRQPDELMAVYLYLMGLDSKKISGQTILC
complement(2488266..2489915)       PHAGE_Vibrio_VAP7_NC_048765: hypothetical protein; NAL212_2520; phage(gi100134)      2.38e-133           NitrosomonasspAL212MSAKEVKFGDSARHRMVAGVNILADAVKVTLGPKGRNVVLDRSYGAPTITKDGVSVAKEIELKDKFENMGAQMLKEVASKTSDVAGDGTTTATVLAQAIVKEGMKYVAAGMNPMDLKRGIDKAVTTAVGELKKLSKPCATAKEIAQVGSISANSDNEIGKIIADAMDKVGKEGVITVEDGSGLQNELEVVEGMQFDRGYLSPYFVSSAEKQIALLDNPYILLHDKKISNIRDLLPILEQVAKAGKPLLIIAEDVDGEALATLVVNNIRGILKTCAVKAPGFGDRRKAMLEDIAILTGGTVIAEEVGLTLEKATLNDLGQAKRIEVGKENTTIIDGAGNADNIEGRVKQIRAQIEEATSDYDKEKLQERVAKLAGGVALIKVGAATEVEMKEKKARVEDALHATRAAVEEGVIPGGGVALLRAISAVKSTKGDNHDQDAGIKIVLRALEEPLRQIVTNCGDEPSVVVNKVAEGQGNFGYNAATSEYGDLVAMGVLDPTKVTRSALQNAASVASLMLTTDAMVAELPKEDAPAGGGMGGMGGMGGMGGMDM
complement(2489969..2490259)       PHAGE_Burkho_BcepSaruman_NC_049850: phosphate starvation protein; NAL212_2521; phage(gi100211)     1.93e-13            NitrosomonasspAL212MKIRPLHDRVIVKRLEDERKTASGIVIPDSAAEKPDQGEILAIGKGKVGDDGKIRPLEVKVGDKVLFGKYAGQSVKVQGEELLVMREEDIMGVIEG
2490608..2490907                   PROPHAGE_Xantho_33913: ISxac3 transposase; NAL212_2522; phage(gi21231087)            3.79e-10            NitrosomonasspAL212MKREKTKTYTAEFRASAVKLANESSKPVAQTARDLGVNENTLHTWINKYSRPLDQDKAVRTDDHLYEELKRLKKENARLTEERDLLKKAAGDSMDESNT
2490939..2492093                   PROPHAGE_Escher_MG1655: IS30 transposase; NAL212_2523; phage(gi16132105)             6.62e-133           NitrosomonasspAL212MNHQPSKRSFTYHQQETMWQLWSQGKSLSEIGRQLNKHAGSVFCYLQKSGGIKPSPSKRSARDLSLLEREEISRGLSANLSFRAIARNLNRASSTVSREINRNGGLSKYRAVSADRRAWMKAKRPKTCKLNDDANLRAIVSDKLASKWSPEQVAGWLKQTYPKASAMHISHETIYKTLFIQSRGALKKELLRQLRTQRVMRQSKHFNTKGNARGGIIDAVSIHDRPQEVNDRIIPGHWEGDLICGTQKSYIATLVERSSRYTLLVKLTGNDTHAVVSAITQKVIELPQQLKKSLTWDRGMELAQHKLFTIDTDIKVYFCDPKSPWQKGTNENTNKLLRQYMPKKTDLSVYSQEQLDMMAEELNDRPRKTLNFLSPSQKISAVLQ
2492135..2492998                   PROPHAGE_Escher_CFT073: transposase insF; NAL212_2524; phage(gi26249410)             2.16e-84            NitrosomonasspAL212MKYAWIKEHVNEFTVDSMCCFMEVSRSAYYAWLHRVQTNREKDDIELTTIIRDVFRNSRATYGTRRIRESLVRWERTVSRGRIGRLMREADLVCKTKQKFKATTNSKHDLPIAPNQLDRQFNVHQPNQVYVGDITYIHTQEGWLYLAVVIDLYSRQVVGWSMADHMRTKLVNDALLMAIWQRKPAKGLLWHSDRGSQYASDSHRALLKQHGIRQSMSRKGNCWDNAVSESFFHTLKTELIHHQTYQTRDEAKQAVFEYIEVFYNRERLHSANGYLSPLDYELQHKAA
2493404..2494024                   PHAGE_Cronob_ENT39118_NC_019934: protein umuD; NAL212_2526; phage(gi431811072)       2.52e-16            NitrosomonasspAL212MSNRGGKRENAGRPRGQGKFGESTVTMRIPQSQTATIKSLLEALQHKKANDAPSENTLPEEEVDEFFTPVISEQPTLLPLFATKVAAGFPSPADDHVEKRLDVSEFLIDHAASTFFVTIRGESMIDVGLLPDDKVVVDRCKTPSHGDIVLAVVDREFTIKILDYGANKMPRLMPANSTGAYRPIYIRPDTQFEIFGVVTGSFRRFK
2494021..2495412                   PHAGE_Clostr_phiCT19406A_NC_030950: capsid maturation protease; NAL212_2527; phage(gi100067)     1.74e-25            NitrosomonasspAL212MSTLLPCYVLLDLETTGVTPTQDRITEIGLIRYENGVETGRWNTLINPGINIPPFIQRLTGITQDMVDHAPTFSQVYETLLQWLDQAVLCAHNARFDYGFLKNEFKRIGVTFQKKLLCTVKLSRKLYPQHHSHSLNAIIERFRLICDQRHRAMGDTEMIAAFIDVAMRELGEATIQEMALILLKQQAIPVGLDHLDIDTLPATCGVYLFHGDSAVLYVGKSVSLRSRVFNHFQGDHRSTKEMRIAQEIKQVEHRITGGELGALLLESRLIKDHQPIHNRQLRRERQLCAWQVSSDPNSKPLVTLINDSDIDWRTANNIYGTFKTKRQAVEVLSKLADEYGLCDKALGLEKGTGVCFAHQLKHCKGLCAGLESTESHWLRLLTALSQYRLLTWPYAGRIGIKEHNPEYGITEIHVFDQWCHLGTVKDYQELDELSPWPRFDRDTYHYLLKFLHRKNVKIIALHG
2495405..2496700                   PHAGE_Salmon_vB_SosS_Oslo_NC_018279: error-prone lesion bypass DNA polymerase V; NAL212_2528; phage(gi399528790)     2.96e-121           NitrosomonasspAL212MDKNTRSIALIDVNNFYVSCERVFNPKLEDKPVVVLSNNDGCAVARSNEAKALGVRMGQPWFQLKDLARRHGIIAYSSNYALYADMSNRVMSILRMFSPDQEIYSIDECFLDLTGFKTKNLVRYGQQIRQRIKQWTGLPVCVGIGSTKTLAKLANHMAKKNPEWNGVCDFNSLSFQQQADWFQHTGAGEIWSIGKRLAPKLQELGIKTVLDLKTASPSQMRARFSVVMEKTIREINGTACIELEEINPSRKQIVTSRSFGIPVSDLASLEESVTLYISRAAEKLRRQQSYAGSVHVSIRTSRFNENVPYYANSMTIALPRQTDNTILLTKAALWGLRKIYRRGYKYQKAGVGLFDLSVPNQYRQLDLFGTLSVTDTKSSKLMSVMDQINSRMGRGTLKIASEGFNQPWKMKQGNKSPSYTTNWDELICVTK
2496852..2496865                   attL                                                                                 N/A                 TGGCGGAGGCGGTG
complement(2497016..2497432)       hypothetical protein; NAL212_2529                                                    N/A                 NitrosomonasspAL212MKIKAPITSDLFPARRNYKAELEEVSARALPFVSKQDRFKPGKKYWDVKPINDYSLACNIGAEYAAHFVQYLKNNPNDVEINLLGSIVEDMDFTDDSGAKGYHVGFFTYLEFLLYKSVKKRKVFHDLDKHRDKYRLEE
complement(2497435..2497740)       hypothetical protein; NAL212_2530                                                    N/A                 NitrosomonasspAL212MSVKSTRAPARRKTNSAALPHPVYLTYEMRKKKAMRDLRHFMDSHEYDDPVWKVVGHVCPFPDPIAGWKEIRRLLDESIAKCKVIPFPVGGKRDHQIAKGA
complement(2498286..2499107)       PROPHAGE_Escher_CFT073: transposase/IS protein; NAL212_2531; phage(gi26248359)       3.05e-52            NitrosomonasspAL212MTDTSIPTTVAPQVLLVNHFKTLKLPTFAREYEKVGIECARDDVDYARYLLRLCELESIDRERRNTERRIRLAKFPVTKSLDTFDFAAIPGLNKPLVLELMRGEWIDKRENIIALGPSGVGKTHVALALGLAACQKGMSVSFTTAAALVHELMEARDEKRLRTLQKQLTNVKLLIIDELGYVPFTAVGAELLFEVFSRRYEHAATLVTSNLPFDEWTSVLGSERLTGALLDRLTHHVHILEMNGESYRLATSKKRQKQAMQSRSTEKENLKPI
complement(2499100..2500629)       PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposase; NAL212_2532; phage(gi557307612)     3.24e-20            NitrosomonasspAL212MYSVELYVKIRRAVMVEGRSEREVARYFGIHRKTVKKMCQYAAPPGYRRKSEPVSPKLAPFTGIIDAILEADKQVHVKQRHTAVRILERLRDEYGFTGGYTIVRNYVYKAAIRQKEMFMPLAHLPGHAQVDFGEADGYIGGKLVRFHYFCLDLPHSDGCFVKAYPTEDTESFLDGHVAAFAFLGGVPQSILYDNTKIAVAKILGDGKRQRTKAFSELQSHYLFEDKFGRPAKGNDKGNVEGMVGYSRRHFMVPLPIAADFNTLNAKLLDGCIKRQQAKLRGQTETIAERMKRDTAALMVFPAVAFDACHKISTRVSSLSLVRYRTNDYSVPTQYGHREVLVKGYVDHVDICLGADTIARHVRSYGQEEFIYNALHYLALLEQKPRALDQAAPLQDWVLPEAFDRLRRLLEVRMERRGRKEYIQVLRLLENFSQVQVEQAIKQAMDLGVVGFDAIKHLILCSIERRPAKLDLALYPYLPNASVKSTEPRAYLSLLQMPKANQQPMEARYD
complement(2501019..2502602)       PHAGE_Stx2_c_Stx2a_F451_NC_049924: tail assembly protein; NAL212_2533; phage(gi100053)     1.70e-110           NitrosomonasspAL212MTTMKPLAQLDQLNLDAHTKQQVTGIVQALLDQAQQAIRVQELKIQALTMELAHLRRIQFGKKNESLSSQPNLFEESVLADIAAVHAEIEQIDVTVKTNAPKSPRVRAGRQPLPDHLPRIEHRHEPESCQCGQCGNKLVKIGEDVTEQLDVEPARFFVHRHIRPQYACKSCETITAEPVPPAIIDSGMAAPGLLAWVITSKYLNHLPLYRLEQIAAREQVTLSRSTLAEWVGRIGVALQPLTEQLKWHLLQGNTLHADETPVTQLEPGNGKTQRAYLWAYRSNDLDPGPRIVVFDYQISRSGQHARNFLQNWQGHLLVDDYGGYKALFSRAALSCTELACWAHARRKFFDLHQANGSSMAFEALQRIANLYAIEKESKHLNIELRQQLRAEKSLPVLDELHDWLRQTRMQTAHGGASAKALDYALKRWPSLVRYAHTGYLPIDNNPVENSIRPIAIGKKNWLFTGSQRAGQRAANIQTLLGTAQLNGLNPGAWLNDILTKLPTWPNSRIDELLPFAPEFIQSLKLKQ
complement(2502656..2503006)       PHAGE_Stx2_c_Stx2a_F451_NC_049924: tail tip protein; NAL212_2534; phage(gi100054)     2.51e-18            NitrosomonasspAL212MSGLIAPVGQIWMVVEPVDMRRGIDGLSLIVQQTLGHSPCAGSAFVFCNRTRNRMKVLLWDGTGVWLCHRRLHQGRFVWPKLEEGCFELTQSYWEWLIAGVDWQRLSALPPAHLQA
complement(2502994..2503290)       hypothetical protein; NAL212_2535                                                    N/A                 NitrosomonasspAL212MTSRERQGGHIKAWEASGLSQAAYCRDHGLNSKTFGNWLRTYRDVQKHNQPISLIPAKITPVASVSGYLKLRCSGGHTLELSTNVSPQWLGELLKCLD
complement(2503455..2503652)       hypothetical protein; NAL212_2536                                                    N/A                 NitrosomonasspAL212MKTKLPREISSLVNRKVHAWGTAYAEQSKQQLMGELERMRSDGATLADIEKYLGNRPPPIFTNSN
complement(2503657..2504061)       hypothetical protein; NAL212_2537                                                    N/A                 NitrosomonasspAL212MPKPRKPESLKLVSGTARNDRTVTGSVKFPIIVDIPVTPEWLPNAYAVNEWNRLVPLLMANKLLTEGGLSALAVLCSLHGKIVQMYAAGECPTGHLSAQYRNLINDFGLTPVSQCKVKAFAGTEKENPFAKHKR
complement(2504309..2505439)       hypothetical protein; NAL212_2538                                                    N/A                 NitrosomonasspAL212MNQQMEKPSTNGEAVQKVMDAFTSFKASHDEKFNGLQEQADRLEEILNRPLNGIPKAEVSQPNRFAVTVSGKIVPVLGREDSLSNYFRPQPSYGEPEWNLEDFVRNSMGISSRSNSVLERGSSTVPEFLTSRIIDDIRAKNTLIKSGALTLPLDGKTVIGRIDTDPIAYLHAEGVDDIDLSLPVFSPVELDPGLIAVQIPLSVETVSDSSNLDLLLRTSIAAAVAKKLDTLGIAALLADANIPDSAIGEDTETWIGLITAAGSHIALNGDWPKAVISNAGDYTKRISQLGGDGHWVSKPPELLPMSDLFTTSMTAGKSIMGDFEKGLLLGMRQELRLEVVRWHQPGSASHLLVAYMRGAFYTVQPGSLYRQLKTVV
complement(2505679..2505972)       hypothetical protein; NAL212_2539                                                    N/A                 NitrosomonasspAL212MADYGKCKRCKARFLTVGFLDYRKAGYCTLECSVGEPPGIPSAESIAWKDKILTHSLKERLPEPPKHDLPLREWIFDMVHYPAPKGWQIENWRLADD
complement(2505972..2506607)       hypothetical protein; NAL212_2540                                                    N/A                 NitrosomonasspAL212MSKKPTKPPETFTGGFSRIPHAVMDSQAFIGLSDRGKSLLFALIRQINGSNNGRLQLTNKWLSGHGWQSHSSNSKAIAELIERELIVISRLGGLNSGSNWYAVTWLQISNFVGLDITAQSYKQGSWADCKLPQTVRRKPPQKQKNHPDKRDSTIPTTGTESKFTIPVYGTKKANFDQSTVPVYGNNVSIPYIPPHSGSKRIVGKSRKGMIQ
complement(2506604..2508013)       PHAGE_Xylell_Salvo_NC_042345: capsid decoration protein; NAL212_2541; phage(gi100066)     4.00e-15            NitrosomonasspAL212MNTSAQLESHHFDRQLKKADKSRFSIKLIKTAPENDLIYEPFGIANKDDYELALSIKEKGIQESLILSKDFILLSGHRRFNAAKYLRLGFVPVRFVEIVYSELSKKEKLEQLRLFNRQREKTPGESIREKLLEINPDEAYEALKRKRLLQHENILDANVSIGIVKKRSRITTKNFLQAAQKVISENKEYWPLTVRRIHYLLLNDPPLRHDKKSESRYCNDRSSYKALTDLLIRARLCRLIPHQSIEDSTRPIQLGGGFSSVQSFIDQEMNNFLLGYSRNLMQGQPHHVEIMLEKNALRSIIEKVARDYCIPVTTGRGYASYSPRYDICKRFKQSGKNKLILLMLTDFDPDGEEIAASFARSIRDDFGVRNIHPIKVALTSEDVTRNNLPSDLDAKPSSPNYKRFFQQHGSKAVELDAAPVELLQTKLRESIASVLDVEEFNAQIDLEREDASLIEAHRKMVLVNLRGAQ
complement(2508010..2508327)       hypothetical protein; NAL212_2542                                                    N/A                 NitrosomonasspAL212MLTLDNTAKAQRMRILSYLHTKPLNTFDARSELDVMHPAARVMELRKQGVGINTIWIDRASDCGKIHRIACYVLVGAGATAPTDTEDGINSKETDKEEHSTEGSI
complement(2508327..2508557)       PHAGE_Entero_P4_NC_001609: transcriptional regulator; NAL212_2543; phage(gi9627517)     9.58e-05            NitrosomonasspAL212MANAEQHEVNISPQFYRLNHLKQRLAVSGSSIWAWTKSGKFPKPIKLSENCTAWSAVEVDAWVQDRIASSQKMEVK
complement(2508685..2509335)       hypothetical protein; NAL212_2544                                                    N/A                 NitrosomonasspAL212MKKTAIRSIPFAFTYEQRKMLINTGWQTDAGREKAEQFINATQTILSHWLTETKEFPQSVAEERHCSAGQIQKSAQKLCNDLKTCPDDVLNTIDTRVKNKVRRPHIFPQYQEAAQFLRNVTGKEVPNLYHMVNVLEQWLNLLSEAAEEVANIKSPPSKNKGKEKWLIHSLAYEYETHFKKKPSSGNGSCFINYCYALSTILDCELGQKMIEKVLKQ
complement(2509335..2510591)       PROPHAGE_Escher_CFT073: putative prophage integrase; NAL212_2545; phage(gi26250313)     2.73e-128           NitrosomonasspAL212MKLTDTAIKKAKPQAKPYRIADGGGMYIEVKPNGAKYWRMAYRFADKQKTLALGVYPDVTLADARDRRNEARKLLANGADPGAVKQSQKKQAKIAASNSFELIAREFHSLKTPMWSTNHAADWIKTLEREIFPKFGNYPISEIDAPAVLDAIRAIESRDAHEVAARVLQRVRAVCAYAIATGRARHNPASEIKGALAPQPKIKHFAALTEKELPDFLRAVAAYPCYPLTKYATALLMLTFVRTGEVRGAKWCEFDLDAKLWKIPAERMKSREPHIVPLAKQAIEILGELHPLTGHGEHLFPNRTGNGKVISENTVLKVIERLGYKGRMTGHGFRTIASTYLNGVGMIRPDVIEAQLAHTEANATRAAYNRANYMEYRAAMMQFWADTLDAMEAGITLPKWTDYTPFNLDYLEAKNRFL
2510772..2510785                   attR                                                                                 N/A                 TGGCGGAGGCGGTG
2511390..2511401                   attR                                                                                 N/A                 AATATTTCTTTA

#### region 8 ####
complement(2601123..2602022)       PROPHAGE_Xantho_306: transposase; NAL212_2640; phage(gi21243165)                     1.21e-129           NitrosomonasspAL212MVTFIDSNKAKYGIEPICRQIQIVPSSYYEHKRCERDPNRLPDRIRRDMKLELEIQRVWENNFRVYGARKIWRQLIREGTRVARCTVERLMKKLGIQGIKRGKKCWTTISDDSLYRPADKVNRQFTAIRPNQLWVADITFVATWTGFVYVAFIIDVFARCIVGWRVSRSLHTDLVLDALEQALWARREIKGLIHHSDHGTQYLSIRYTERLTEANIEASVGSIGDSYDNALAETVNGLYKTEVIRHRGPWRSIEEVEFATLEWVDWFNNRRLLEPIGNIPPAEFEMAYYRQLEESADAV
complement(2602022..2602342)       PROPHAGE_Escher_Sakai: putative transposase; NAL212_2641; phage(gi15832212)          6.55e-39            NitrosomonasspAL212MKNQISYSPEVRERAIRLVLEQQKEHESQWSAIKSIASKIGCTAETLRTWVRRAETDQGIRCGMSTSDRERLKELERENRELKRANEILRKASAYFAQAELDRRPK
complement(2602365..2602568)       hypothetical protein; NAL212_2642                                                    N/A                 NitrosomonasspAL212MPDVFIEYLYSEANAVIKTVTTWIPIANLEVESAFTVSNSEIRPFSKAVLDKWAVKVETESPRVFRR
complement(2602596..2602949)       hypothetical protein; NAL212_2643                                                    N/A                 NitrosomonasspAL212MILNIHPSAASNFNDKAGSLIKLIEEFPKEKQKKSLFQSDLYIAASITEKDIIGDIEEATLDYRGNIVQRFFYFNDKKFGLSEKNYSELREIAERIQSLSAVRRVLSLLFVERKLFT
2603069..2604031                   PHAGE_Burkho_KS5_NC_015265: ISBmu23 transposase; NAL212_2644; phage(gi327198044)     1.82e-13            NitrosomonasspAL212MKKREQGNLFLTLDALVPLDHPYRKLDQLLPFDKLSLAYRGLYSPKGRKEKGFEFGLRALIIQFMEDLSDREMERYLQENLACKWFCDMNLGEAAPDHSYFGEFRKRLGTGRLMDIFSQVRNGLQGMGLIREIFTFVDACQLISKLTTWDDRDRAIKQGIEQFNNETAGKVAADKQARFGCKGKNKYWFGYKEHVSVDMQSGLINKVAATSAEVTDAHGFQHVCPNGGAVYADKGYGLNPVKITLKRKGCHDGTIKKNNMKEKNRDKDRWLSAIRAPYERVFAHRNKKVRYHGLVKVQFQVGIRALVFNLKRLMTLGVDC
2604574..2604894                   PROPHAGE_Escher_Sakai: putative transposase; NAL212_2646; phage(gi15832212)          6.55e-39            NitrosomonasspAL212MKNQISYSPEVRERAIRLVLEQQKEHESQWSAIKSIASKIGCTAETLRTWVRRAETDQGIRCGMSTSDRERLKELERENRELKRANEILRKASAYFAQAELDRRPK
2604894..2605793                   PROPHAGE_Xantho_306: transposase; NAL212_2647; phage(gi21243165)                     1.21e-129           NitrosomonasspAL212MVTFIDSNKAKYGIEPICRQIQIVPSSYYEHKRCERDPNRLPDRIRRDMKLELEIQRVWENNFRVYGARKIWRQLIREGTRVARCTVERLMKKLGIQGIKRGKKCWTTISDDSLYRPADKVNRQFTAIRPNQLWVADITFVATWTGFVYVAFIIDVFARCIVGWRVSRSLHTDLVLDALEQALWARREIKGLIHHSDHGTQYLSIRYTERLTEANIEASVGSIGDSYDNALAETVNGLYKTEVIRHRGPWRSIEEVEFATLEWVDWFNNRRLLEPIGNIPPAEFEMAYYRQLEESADAV
complement(2605977..2607476)       PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposase; NAL212_2648; phage(gi557307612)     1.21e-22            NitrosomonasspAL212MVMYAKIRRMYYREHLSINEIQRRTSLSRNTIKKWLKAPNDSAVKYQRAKKPGKLTLFESRLLLALEADARRPKKDRRTALMLFKEILSEGYTGGYSIVCDFIRGWRNQGSQSKSVYVPLRFTLGEAFQFDWSEECLVIGGIPRKVLAAHTKLCASRAFMLSGYPSQSHEMLFEAHTRAFTAFGGVSRRGIYDNMKTAVDKVSKGNGRIVNTRFFAMTAHYLFDPDFCNVASGWEKGVVEKNVQDMRRRLWNEAKQQQFSSFDDLNRWLETRCRALWSEIQHPDYAGITLADALEQEQLYLMPMPAPFDGYIEVLARVSSTCLVTLQRNRYSVPCRLANQMVAVHQYADRIEIVHNNAIAACHTRLLDSDQVSYDWQHYIPVIEKKPGALRNGAPFAELPVPLLQLQTALRRRERQQADRIMAKVLSLVPTHELEAVLVAVELVLESGVPSAEHVSNVLARLKHTDVPASVETTLKLNEEPQADTARYDRLNKQEVPHV
