gi|00000000|ref|CP002593.1|  Pseudonocardia dioxanivorans CB1190, complete genome. 7096571, gc%: 73.31%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

#### region 1 ####
1191535..1191552                   attL                                                                                 N/A                 CTCATAACCCAGAGGTCG
complement(1191633..1192973)       PHAGE_Bacill_phBC6A52_NC_004821: DNA integration/recombination/invertion protein; Psed_1123; phage(gi31415821)     2.20e-38            PseudonocardiadioxanivoransCB1190MNGSVKKHGPTWRYRIDLGPDPLTGKRRQLTKGGYRTKREAQNACNEALENARRGQLVRTSRKTVTEFMEDWITSRKLDMKPSAWRGYRDYLDAYVLPTVGTTPLQDLDTIRLNLLYVHLLEQGRRKVDRDAQMHAFYLAEIAAGHEPKAKALAEAGGVTYDAGRKALIRYQRGQTPRQHDGGLAPKTVRNVHVMLHGALADAVRWNLLQRNPATDARPPRVRRRSHAIWSTDELRRFVEHARSDHHAALWLLVCTTGLRRSELAGLRRADLDLANGRLTSGETRVVVGGQATDSDGKSDDSRRTLALDPVTVDALREFLVRWDELKQEFGHNGQHLFCHPDGRPIHPDTITEWFARLSWEAGLPPIRLHDVRHSYATAALRAGVPVKVVSERLGHSSVSFTQDTYMHVIPGMDEHAAQVAATAILGPQTISVTTAVTIGAESPLT
complement(1192970..1193251)       PHAGE_Pseudo_PMG1_NC_016765: excisionase; Psed_1124; phage(gi374531681)              2.15e-05            PseudonocardiadioxanivoransCB1190MSSPAAHPTDVDPTASRSTVDIRSLTADLPALITIPRAADLLGLSRASAYRYAAAGELPTKRFGRRVYVITHRIRALFDDESGTAPALPGEAA
complement(1193399..1194535)       PHAGE_Microb_Teagan_NC_049929: holin; Psed_1125; phage(gi100034)                     7.10e-13            PseudonocardiadioxanivoransCB1190MSPANHLTPDPNGPQNAAQGPMSGPVTSRDRGRLEAVPPPSRTHWDAEELMTMTFAPPRWAVPGIVCEGVTLLAGPPKVGKSWLSLNLALDIAAGRPALGSIPVEAGPVLYLALEDTPRRLQSRMRTVLAGRPAPAGLTLSIACDPMPAGGDEQVDAWLTAHPGARLVVIDVFAKVRGNPPTGVAAYDADYAAMGRIKRVADRHGVAVLLVHHVRKAAAEDFLATVSGTNGLAGAADAVLVLERARAQADGVLHVTGRDVDETDYPLAFDSQAGAWQVLDGPTADYLMRDTRAQIMRFLRDYPGQRPKQIAEALQLDATTVRQTCRRMVADGQLHATPGGQYSPAGGDTGDSRDTTGLEPPSLLSLRHADALDQAEPS
complement(1194532..1195479)       PHAGE_Rhizob_16_3_NC_011103: p101; Psed_1126; phage(gi195546631)                     5.22e-16            PseudonocardiadioxanivoransCB1190MSTHSHHLAGLLAAALDAAGRGWPVFPLHPATKRPALHGHAHCPRTGPCAGADGHLGWEQRATTDPDRIHTAWAAGRAFNIGLATGPAGLVVIDCDTDTDGAPRAQWAGAGGGLDVLHRLADQAGALPATFTVATPSGGTHFYYRAPACDELRNTAGLLGWKIDSRAHGGYVVAAGSTTPAGAYTITDARDPVELPGWLFARLRPPPPPVIPTGPIRTGTGRRARYLDAALRAETARVHDAPASQRNASLYVAAVALGQLVAGGSLTEPDARAVLTNAAARHLALRAYSPRQAEQTITSGLRAGAKRPRRIEDAA
complement(1195679..1197928)       PHAGE_Bacill_SP_15_NC_031245: hypothetical protein; Psed_1127; phage(gi100161)       1.81e-06            PseudonocardiadioxanivoransCB1190MSEQPMNPHPNDENANADQAEQEAGDGGRVLDFPARPVELTAPADEPAVLERDRFLTGEIVNHPDDAGGGRPVLVDAPAPRRPDGVLPWIGREIERRPIIAPWLRHRDDIRDAARWATGWAWHAAGFHTVRAPLYAARLAARSPRGAVVALANAGRWVGDAESKPLRDGAIRGREADQFLRLAAARAERVRARRRLAVVAVLAGAAGLVALDTWAPGWLLGLLAVAAVLLLGRVGTTPDKPVTGRSVVAHKPTRLTSDLVVRALGALGLGEINKAMSKGANGITFPAPITRDGPGWRADVDLPYGVTVSDIVERRDRLASGLRRPLGCVWPEPAHDAHAGRLVLWVGDQDMSQAKPRPWPLAAHGQADLFRAVPFGMDQRGRLVSILLMFANVLIGAMPRFGKTFALRVLLLAAALDPNAQLRIFELKGTGDLSPLEGCCHHYASGADDQTIDAAMESLREVYAELNTRAKRIAGLPRELCPENKVTPELAARRELGLFPLVVAIDECQELFSHPDHKDEADRLATGIIKRGPAMGVILILATQRPDAKSLPTGVSSNVGIRFCLRVMGQTENDMVLGTSAYKNGIRATTFGPRDKGIGYLLGAADEPQIVRSAYIDGPTAEAIAGRARALRELAGTITGHAAGETRTDDRPARSILADVAAVFAPGEDRLWSDTIAARLVQQWPTTYPGTTPATLAALLKPYGLAPAQVWGTDETGTGRNRRGYLRDAITTAWEETERRRRRTDGDNR
complement(1197928..1198890)       PHAGE_Strept_phiBT1_NC_004664: gp25; Psed_1128; phage(gi29366800)                    1.22e-09            PseudonocardiadioxanivoransCB1190MTALARSTGRVDRLAEQAADAAAVRALTTHPDVIALRVERIRSQVDALLWAGIVLGLAFTMVNVQSFAAGGADPFAAAWWVAWLLDPMVSLVLLAVLRAEQVTARYQVALPAWGRRTKWLTFAATYVMNTWTSWGLAGAPLSWSGVVLHSVPPLVVFATAESGPGLRDRLTEAVRRALTEHAAGEGSTGGDTAGAPTTDVAVHEQPAEPVREPAAEPVPAAVTRPAARRAPRRPARPVPRRLLADYLADARTALHTAHAAGEVVEPSPTWCRQVTGCSAGTSVKLAAALRTDQPTPAPTAVPSDLPSRNGRPGAGEEVAA
1204226..1204243                   attR                                                                                 N/A                 CTCATAACCCAGAGGTCG

#### region 2 ####
1261536..1261551                   attL                                                                                 N/A                 GACCAGCAGCGCCGCG
complement(1271060..1272124)       PROPHAGE_Escher_CFT073: transposase; Psed_1201; phage(gi26248352)                    7.70e-21            PseudonocardiadioxanivoransCB1190MVVLGVDVHKDTHTTVAVDEIGREIGQKTVPARDRGHAALVRWARAHHPGGRMWAIEDCRHVSTRLERALLSAGERVVRVPPKLMAGARAAARTRGKSDPIDALAIARAALREPDLPAAEHDRTSRELKLLVDHREDLVAERTRMQNRVRWHLHELDPDLDIPSRGLDRLRVLDRLLAWLGQHPPAPQSQMVARIAAELLADIRAVTVRVNALERELSRLVEQVAPQLQAVPGVAGLTAAKIIGEVANMSRFRSEACFAMHAGVAPIPASSGRTNRHRLARGGNRQLNAALHRIAVTQARLPDTPGRTYYQRRLEMGNTKMEALRALKRRLARVVFNLLHTTTSTTTGPQPVAA
1272434..1272509                   tRNA                                                                                 N/A                 GGGGCTGTGGCGCAGCTGGTAGCGCACTTGACTGGCAGTCAAGGGGTCAGGGGTTCGAATCCCCTCAGCTCCACCT
complement(1272472..1274250)       PHAGE_Entero_EFC_1_NC_025453: site-specific integrase; Psed_1202; phage(gi725950572)     7.54e-31            PseudonocardiadioxanivoransCB1190MTSAYADFIDELQQDVTIPIQPPMDDLAPGTRAVIYLRVSSTGQVRTDYNPEGISIPAQREACLRKARELGVTVIDEYVEPGRSGTEMTKREAFQQMLARVRSQGDVDVIIIYQLSRMARNRYDDAIVMADLRKRGVTLVSATEAIDDTPVGQLMHGILATFNEYQSRQSGADIAYKMGQKARNGGTLGRAKIGYLNHIDHSDGRVIRTIIVDPERAPFVQLGFELFATGDYTQEELADELYDRGLRTRATRRHPAKKISENKISQMLRDRYYLGYVEYDGEEIQGRHEPLIDEDLFDTVQEILESRMTAQERRRVHHHYLKGSLFCGRCQRDGIKRRMIIQRTINSKGAEYLYFFCRGRQKGLCQAPHVNVTLVEDAVERHYSAIRFSQPFIADMRDQIDAVLGEQEKSARLLRKQITAQLKELDTKEENLIDLAADSTLPRTKVKEKLRDIARERRRLEERLDTANADLTDSAQLVNAGLALLKQPDQLYRRCNDQQRRLLNQAIFHALYIEDDKITDGELREPFGELHAIQDQRAGATGAEGASKRTTRDAGGPCTPSGVAVLLRGLHSGTCSSKTSKVELRGFEPLTP
complement(1274365..1274661)       hypothetical protein; Psed_1203                                                      N/A                 PseudonocardiadioxanivoransCB1190MTSAYANSVNEGQQRCPVPTQRPSDAPATDARAVIYRRVASDRAESEHSVTAQREACLRRARELGLSVIDEYVAPRARLWPWPKCQPFRRILARFRSR
complement(1274731..1275834)       PHAGE_Escher_pro483_NC_028943: DNA invertase; Psed_1204; phage(gi971758535)          1.04e-08            PseudonocardiadioxanivoransCB1190MTASAVPAHSTHVMVRARVAAKPASRGPATAGVGGWECPLCRRFLSPTSSPMNPRQPRTSWARRGRSCALNLAPLTSPTTTAPTFLLRPTRSRKAPSVRRTGNPDDALARAEPCAMWWCAASAAIHPTCTSSRVWSPASQLTWCRPKPANKRCPPSQALRASTTATTAATRHDAAHSRLRNERNRSKPHAIDSKGRSSTMPPVTCDPRSPRDTHPRARCSIRVGLYQRWPTLRESDHLQTYVASQPGWYIALRGSDYASGGTLKRPGLQRILAAARSGDIDVLVVNHLYSLSRKTQHLAFVLSELTSRGVRVVSAADPALDTETAHGLFLVRVVTAVAEIEQTGAVADRRDRRRHEQRSGDESPLAG
1276278..1276556                   transcriptional regulator; Psed_1205                                                 N/A                 PseudonocardiadioxanivoransCB1190MEIEWRLRKVMASRDVWTATQLRELLIQRAGFELSLQSVDVLIKKQPIQVKVATLQALCTTLRCTPNELFGIDTPRDVSLVEPDTTESRGEQ
complement(1276586..1277374)       PHAGE_Mycoba_DarthP_NC_051607: hypothetical protein; Psed_1206; phage(gi100040)      1.04e-81            PseudonocardiadioxanivoransCB1190MKFYLGVHQPIWLTRVPDIPLLVSHRRLGHRRTLPRATTEWALDSGGFTELQLHGRWQIEEKDYVRAVRRYADEIGNLAWAAPQDWMCEQRILKRTGLTVREHQRRTVRNLVRLRELAPELPWVPTLQGWTLSDYERCADLYERAGIDLGAEPLVGIGTVCRRQSSADVERIMRAFATRELNLHGFGIKITGLSRYAEALSSSDSMSWSMRGRYVPGCGPSHRTESNCLRFALSWYRQIRTTLGSAGLSADNVSPQVSRRAA
complement(1277371..1277898)       PHAGE_Mycoba_GreaseLightnin_NC_051731: minor tail protein; Psed_1207; phage(gi100055)     1.15e-22            PseudonocardiadioxanivoransCB1190MTTRRWRVAAGILVAAYAATIAGANWATTLWPAVAVAVAGLHVPAGSLLAGLAFTVRDLLQDAVGARTTLLAICLGAALSGLVAEPRIALASAAAFAVSELVDLAVYTPLRDRSRLAAVGVSNAVGLLVDSLLFLPMAFGSLTYLTGQLVGKTATTLLAVAVLGVVRARRRAVPA
complement(1277895..1278689)       PHAGE_Thermo_THSA_485A_NC_018264: Recombinase; Psed_1208; phage(gi397912662)         1.20e-07            PseudonocardiadioxanivoransCB1190MTTRLYCRECGWHPEFRRKRAALRAAARHQCTGTPVAEIRPPWWSRLWTNLWTTRSDASVIDTEDGAVDQAGDDVLADAHGNRIQWAALSAHHAETTRRARAAMVELVRAGYQIGPPPYGYRALRIRVTDPSGHSKLRAVLVPDWQTAAVVKQIFIWRADRGLTFAVIAAQLNNDPRQYPAPVPNGRWTAKAVRRIVTNVKYTGRQVWARTVAGRPAPVEQWVTSAPKVHEPLVDERTFHRAQPGAADSPPDAENSADTRPSAA
1281033..1281048                   attR                                                                                 N/A                 GACCAGCAGCGCCGCG

#### region 3 ####
5206999..5207010                   attL                                                                                 N/A                 GCCGGACCCGGC
5212565..5212942                   PHAGE_Cellul_phi17:2_NC_021798: hypothetical protein; Psed_4852; phage(gi526177852)     1.34e-14            PseudonocardiadioxanivoransCB1190MTSSGRDRAPDGARAMRRPAIRSWRRTAALVAVTVAAALVLAGCAATNTAAPAIAGAPGFWLGVWQGMILPIAFLVSLFDDHVAVYAVPNSGHLYDLGFVIGACVIPLPTILFGGGRARRRRSAR
complement(5213097..5214281)       PROPHAGE_Escher_MG1655: IS30 transposase; Psed_4853; phage(gi16132105)               7.89e-64            PseudonocardiadioxanivoransCB1190MELRARGWSIQAAAREVGTSRTSGANWARGYKTYRDGRVVGFVAPLDRLAVREISSRYLSQDERFQIADLRRMGWSIRRIAAHLGRSPSTISRELRRNARNDGGYRPFDAHRRAVARRARQHRRRLDTNHELRALVGELLAQRWSPQQISRHLRARFPELPGMRLCHESIYQAIYEPGSSLVRPSRVPSVHRSPLRTGRDHRRAHQKVERRRPRFAQPMLTIHQRPFRPEDRSEAGHWEGDLIVGKDHGSAIGTLVERTTRLVRLLHLPQRDAHTLHRVLAMRMGDLPPSLLRSITWDQGTEMARHTDITATLAVPVYFCDAHAPWQRGSNENTNGLLRQYFPKRTDLSIHSPRHLKAVENELNTRPRMVLADRAPAELFAALLASSSEPSLRR
5214464..5214477                   attL                                                                                 N/A                 GAGCTGGCGGCGTT
5214732..5215820                   PHAGE_Bacill_vB_BtS_BMBtp14_NC_048640: tail fiber protein; Psed_4855; phage(gi100052)     1.18e-06            PseudonocardiadioxanivoransCB1190MTRRLTVIAGAASVAAPATTDPWEFQGECVEAFVASWRARGFSPVTIENDFGLLERTLTALGRPAWEVTPEDVDRVVGDLAIAGRKASTRRDYVQIFKGFHRFLQVRKAAEIQAWFGVSLVCPVDEFNASRHVGDDSPDSMPPPTPERVGQFFEFLKGRIATARKYAPAARDYALFRTLYHAGLRSEEASLLDVADVHFNRGPFGKLHVRFGKAARTSGPRPRWVPMLDGLDLVLRWFLNDVRGKFPDSPVLFADESGGSLHRGTIRNRLRRLMELEGRAAGEWFSPHALRRACATHNYERGVDLVAIQQLLGHWTVSSTMRYVRPSATFIEDAYRRAVSTTLSELGGPDEPVERAGEDERR
5215817..5216134                   transcriptional regulator; Psed_4856                                                 N/A                 PseudonocardiadioxanivoransCB1190MRIRWRLRMAAAQREVWTGTQLRRLLGERAGVEMSAASVSALFTKEPSQIKLSTLIALCTALQCTPDDLFEIDTTPVERPVAPTRPTALDGPRASGTGGRSLPPM
5216201..5217847                   integrase domain protein SAM domain protein; Psed_4857                               N/A                 PseudonocardiadioxanivoransCB1190MGKKQRDCADCGAPVGLLDQPRCCRCSRRVRENAAKEPCPACGNQRVLQADTGRCVLCSRRCRRCDRPRRSATETLCKTCRRTDQRAAAMQICPRCARLGHLRAATGWCGHCSRPQPGPQPPRPCAGCGRVRRHAGLGLCSACWQRHPARPFIRAEALAERLASPPDWLESFTAHVASRYCPSRACMLITELGRLLADEHSNLPAAVLDRARRPGRSMGPLARVLEDFFTDHQLALATDHPEQLAAGRRRRRVDRVPAPLRPAVAGFCEKMLHARERARRAGTRARSDHTVETALTIVGDLAQFLTEQRGKHGWELVDIGDIEAFLAGMPASRKRRLVVLRQFFRFARARRLILVDPARDLSASEPSAFRGSTLTLAEQRSLFRRWTTDLSADSAAGDGVHPHEALVGMLALLHGASSQEMRLMLIDDVDEHARAVRLGRRPHPVPLDPASWSVLQRCLAHRAQQRTDNPHVIVTKGTKAGRRAASTAYLSHVLDPCGAAPRMIRSTRLVDLVNVMDPKLVAAAFGMDPQSPLIYLADHVDAGRLPNP
complement(5217744..5218493)       PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposition protein; Psed_4858; phage(gi557307613)     4.82e-46            PseudonocardiadioxanivoransCB1190MLAYLARVLKTPTIGRCWEELAEQARDENWSHEEYLAAVLQRQVAERESAGTTMRIRTAHFPAVKTIEDFNLDHLPSLRRDVLAHLATGTFVAKAENVILLGPPGLGKTHLAIGLGVKAAHAGYSVLFDTANNWITRLAEAHQAGRLEAELKKVRRYKLIIIDEVGYIPFDQDAANLFFQLIASRYEVGSVMVTSNLPFGKAHMFDRTCVRSRRNITGSAAGRRRRGRPDRSVGTAGPSRTRPRRAWGP
complement(5218565..5219677)       PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposase; Psed_4859; phage(gi557307612)     2.97e-06            PseudonocardiadioxanivoransCB1190MQVRALLVQWPTMPGPVIAQKIGWPYSEGPLKKLLARIRPEYVGIDPSDRTVYEPGEIAQCDLWFPETPIPVAARQVRILPVLVLTLAFSRFLSATMIPSRQGGDILSGMWLLISQLGRVPKTLVWDRESAIGGTGKVSVPAAAFAGTLATRIRLAPPKDPEFKGMVERNNGFFETSFLPGRAFASPADFNSQFTDWLTSRANTRTVRAIHGRPVDLLETDYQAMTVLPAVAPTVGLTHRIRLARDYYVRVDTCDYSVDPRVIGRFVDIVASPTTVEVFCDRQLVARHDRSWAKHLVITDPDHVATARQMRQALAEHHRAQQQAGQRGQRRHSDGHPVAIRALPDYDALFGVDFDPTSPTAADAAEASNP
5219807..5219820                   attR                                                                                 N/A                 GAGCTGGCGGCGTT
5223456..5223467                   attR                                                                                 N/A                 GCCGGACCCGGC
