gi|327380861|ref|CP002616.1|  Lactobacillus casei LC2W, complete genome. [asmbl_id: NC_000000].3039042, gc%: 46.36%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
546007..547449                     Integrase core domain protein; LC2W_0535                                             N/A                 MADTKKQLRWYNVALIAFVSVWGLGNVFNNYAQQGLSVVTSWILIMAIYFVPYALIVGQLGSTFKDQAGGVSSWIKETGTVRLAYYAAWTYWVVHIPYLAQKPQAILIALSWLFKGNGNFVNTVSSMTVSLICLALFLLFLWLSSRGLTTLNRIGSMAGTAMFLMSILFIILAVTAPLMVKGVHVATPDMGDIHTYLPKFDLNYFTTISMLVFAVGGAEKISPYVNNTKHAAKEFPTGMLVLAGMVAFCALLGSFGMGMLFNSNQIPTDLMANGPYTAFAMLGSYYHVGNIFVILYAIANALASISALAFSIDAPLKMLLSDADPHFIPKKLSHLNKKGTPINGYWLTGILVSLLIIVPALGIGNMNELYKWLLNLNSVVMPLRYLWVFLAYYLLNKHLEKFQAEYMFVKNKHVGMIIGGWCFLFTALACLLGMLPKINYLNDPGTWWFQMGLNIITPVIFLALGLILPFIARRDEARLL
complement(547559..548062)         Conserved protein; LC2W_0536                                                         N/A                 MRTQTKTSVMKLAAVGAVAGLVSGLVKLGWENILPPRTPERDATNPPQTFLQQHGLTAAQTHATYTYSDHQIPWVSLLIHFGFSSSLGALYAVAGHYVPLFKLGYGSMWGLGVWAGAHLWAMPALKIVPAAKDQPVEEHLSEAVGHMVWNTVNQIVISDMLREKGGN
complement(548241..549134)         PHAGE_Burkho_phi1026b: gp58; LC2W_0537; phage(gi38707948)                            8e-06               MNLFHLRYFVTLAKSQNYTRAARQLNITQPSLSNAIHGLEAELGLALFVRQGRNVVLTSEGREFSRIVDHSLTILDSGIEQLQHQNNEQTVIKLAALRTLSTRWVPGMVREFLQNSQQDVRFEFTNENGLSPQIIQGLRAKHYDICFCSKVDEQEDIAYFPIASQALVVITPTDHPLATRNQIELSETLAFDQVTFSKRSGLAPIIRQLFAECGGQPHSVYAIEEDEAVAGLVASGFGIAVVPNMPLLKTLPVKIIPLSFPTWQRIFYMATLKDHYQSSAAKDFIDFVHAHHADIRQ
549568..550155                     Xylose isomerase domain protein TIM barrel; LC2W_0538                                N/A                 MCHLFGVEHINTGLMESYPVDFTAKKLQELAHRAALAGNLIIALEPMPYSGMPDLKKTWAILQGAGAPNVMMLLDMWHWVRADQPFDLLTKEQAKRVISIQLDDAYKRPYAKSILRDESMHDRLAPGTGFEDRTEKFIKMIKEAGVDPKVIGVEAISDHYMAKGIDWVAKYTYDTTVKTLQAAWQEILKETVATH
550172..550672                     Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase; LC2W_0539                     N/A                 MADWLGLKDKVVVVTGAVGGMGTHFCEAFAEHGAKLVLVDIKKDAIQTAAKKLADQYGVQTLAVATDTTDEDEVDAAVQAVVAEFGKVDILVNTAAILRFSPFEDLRLDEWKTAVNINLTGYFLMSQRFGRQMIAQHHGTMVHISTVAADFPETYSGGLQHNQSRG
550674..551006                     hypothetical protein; LC2W_0540                                                      N/A                 MLSKQMAAEWGQFGIRSNCVMPCLVKTPMSADFYKDPNVLDGREHLVASRRIGNLDDIANAVLYLSSDRSDYTNGDELRVDGGLGIMMQDMIPKPGGRREYAIKAHQAAK
complement(550981..551097)         hypothetical protein; LC2W_0541                                                      N/A                 MPPLSSYFHEHFEKKNLTQGAIKLLLSILQITWQLGAL
551103..551993                     Shikimate dehydrogenase; LC2W_0542                                                   N/A                 METWISGTTGLLCLLGSPVGHSGSPAMYNFSFQKQKIDAAYVAFDVTKEQMPEALNAMRLFKMRGGNVTMPCKNVAATLMDELSPAAKIIGAVNVVVNDDGKLIGHITDGIGFVRNLQEHGIDIKGKHLVVLGAGGAATAIQVQAALDGAKQITIFNRQDEFYSRAESTAKKLAEAAPAVKVDVVQLENTDRLKAAIADADILVNATTVGMKPDDGVSLVDPSFLRADLVVADTVYNPLKTKLIEDAEKVGAKTAPGKGMLLWQGAAGYQLWTGQDMPVKAYQAFEEEREPDRSLV
552027..553244                     Putative transporter; MFS superfamily; LC2W_0543                                     N/A                 MKTKRNHFLPGALALYFSYAMLGIASSILSQYKAQFASNWGAQQLSNGTVDVSMVVSVIAAFGLGRLIAYPFAGPVSDHFGRKVSGTIGIGLYVIFFIGIITVNSFWAAYLIGILNGMANSFLDTCVSPSLMEMFPESASIANLLTKFAVVTAQFILPFFIGGVAAAGLSFQTIFIICGVALAADAIAIIVFPFPKREKPQLNAAGTPEKMHFSIGSVAAILIGFTSSTTFMVWLNCNQELGAAYGVKNPATLQSLYAVGAGIAVLLTARLIKAGLKESTVLILYPTIAVVMLALCYFVQTPVILYIGSFVIGYAAAGGVLQLATSTTISFFPSHKGTATSLVMIASSIANYAVLSAAAGLTKAFGDAAPRMIILLNIVITIVGIGLALVVKTQEKHVLAVSQVH
553263..554162                     Shikimate dehydrogenase; LC2W_0544                                                   N/A                 MSLKDEIDGHTVLAGLLAHPAGHSMSPAMYNATFEKLGLNDAYLSFDVDTPELAHALQAMRSLHFLGGNLSMPNKQKAIPLLDKLSPAAKLIGAVNTIVNDHGVLTGHITDGTGFMQALSNDGLDIRGEKMTLAGAGGAGTAIAIQAALDGVREINIFNRRDASWQNAERNVAIINDQTQGHATLFALDDQPALKASISDSVIYVDATPAGMKPLETISNVPDGDWFTPETIVFDTVYAPRETKLMQLAKEAGVNHVYNGINMLINQGAAAFHLWTGLQMPVDYIRETVFGEPAAVAHS
554134..554253                     hypothetical protein; LC2W_0545                                                      N/A                 MNRRQSRTRKQEDEFMQSATRLKSSFRQIKKEDNLVKKP
554607..555422                     Homoserine O-succinyltransferase; LC2W_0546                                          N/A                 MEKSPLKIGILNVMHDKADTKTRLQHVLAHTDIPVNLHFYYPMTHYAGRTVPEAVSSILDPLDIHEVATMDGFIITGSPIETLEFDQVHYIAEVRTLLKTLSQHVPNQLYLCWGGMVALNYFFGISKLILPHKLFGVYPQTILEPHPLLKGLKNDFKSPHARYAEMDVRGIHADPRLTINATTTKGKLFMVTEPTDTQTFVFSHIEYDRWGLDSEYKREVAAHPEIDYVRAKHYYHHKNDYDHPKFNWKKTQRTIFDNWIQHVADHRNDNH
555456..556385                     PHAGE_Lactoc_P087: putative cysteine synthase; LC2W_0547; phage(gi229605000)         9e-90               MVTAADNITGLIGNTPLLKLNRVVPEDAADVYVKLEFFNPGGSVKDRIALAMIEDAEYKGVLKPGGTIVEPTSGNTGIGLALVAAAKGYHLIITMPETMSVERRALMRGYGAELILTPGADGMPGAIKKAQALSKENGYFLPMQFQNPANPDVHERTTGQEIIRSFDGGTPDAFVAGVGTGGTLTGVGRALRKINPQVQIYALEAAESPMLKEGHGGKHKIQGISAGFIPDVLDTNLYQDIIEVTSDQAIDMARHVSHEEGFLPGISAGANIFGAIEIAKKLGKGKSVVTVAPDNGERYLSTDLFKFED
complement(556579..557124)         Hydrophobic protein; LC2W_0548                                                       N/A                 MSQIILLIAALFFFTRHVFRFERISRLTLVIIPAYTLVTGILLVSHKRPTFLALGVTILIGAILGWFQTTGLKVHVSQKHDVNGLPIIEIRHGWQYLVGWIVIFIYGLGFALLSGWHVDVLSELSEEIEKDLFVWKNFSSSTWNIMIMSATASLVYTWRLLQKEPKIQAVIFKGTHLDHHD
557246..557317                     tRNA                                                                                 N/A                 GTCTCCATGGTGCAACGGATAGCATAATGGTCCTCGAAACCACAGATCCGGGTTCGAATCCCGGTGGAGGCA
complement(557445..558614)         PHAGE_Lactob_phiAT3: putative integrase; LC2W_0549; phage(gi48697280)                0.0                 MATFRKRGKYWEYRVKYTDSAGKQLVASHGGYRLKSSAQDAAEAVEDDLKRGGDPSKQDVLLLDYWDQWAEAYRINGKSINTVYRYKLFRKHLKSRFDGRKLNSIRPIEWQKFINDFAAGKDRKEKTTRKRPRERSKDIVTKMNSYVRGMVKAAINERILFSDFTFGTKTSGVRSSGKVKVLDSRDFAKVKAIAIERASYRNIGALAVYIGSMTGMRISEVLALTWPDIDTKLCVIHVTRSWDHLYGTGFKPTKTDSSVRDIEISPSVIELLNKIHQEQAASYLRTGYRDEDQMIMRDPRHNVITDSACNKALHVIQNKAGIPEDKQITFHGLRHSHVSYLISKGVDIYYISKRLGHSDVTITMKVYGHLLDSQRKQEAHKAVLFMDQL
complement(558727..558987)         PHAGE_Lactob_phiAT3: hypothetical protein phiAT3gORF33; LC2W_0550; phage(gi48697293)     2e-10               MKPITVISYKFGEKTWKNFEGEPIKKYEHSVLLDISDTEVFTDKEKTELNDKIVVPFSRIREKRFIKDIPLSNVNEALNKKKAGRK
559077..559697                     hypothetical protein; LC2W_0551                                                      N/A                 MEMQQLILAGIPGFLTFIWLDKLDAIHFDLPARQADRTIALILISMLNAAGGLAIYQQIWGTVGRSFWSEFGLFVVTLILSVPLAFTYYFLIKLGNSCLIWIQEQFHVATVLPGSPLVEALKNKEYSEEKLVIIFDFNDKLISSGYANRLPGSDDPTQQIGLMTYGQDWTVKLAQKKYDESPQNSEQIIDFDRQLKIYIIGINPYS
complement(559681..559917)         hypothetical protein; LC2W_0552                                                      N/A                 MLAGYKKTPAAVVEEQLDYVEEKKLQKDNSDKAKSLPDKKSGLFFDRNVQNRSIKLVHKDPVPHKPKMPDSASSKNKD
complement(559918..560025)         hypothetical protein; LC2W_0553                                                      N/A                 MLKKIVAILLIVLLAGATTACASDQDDDQNVEQFN
complement(560110..560817)         PHAGE_Lister_A118: gp34; LC2W_0554; phage(gi16798817)                                5e-07               MNLLPEDQVDAGQAYDGLGNSEIIDTAFENKIWQLSKFAALNQPVSVDIDGKVYAEIRQTKYFIGKIPNDKVKTFSALYLNDKVELWVSIHGGTYKQTSTRSDGSITVKTYRAPVTLKLIAEDQQPAKTLNNNSGEEWSEVGKKMYAAKRKPYCLNCKHQLKGERFCPNCGAKIIYPGEHQNGMPINSWEKVANGADKFSQSVDKTGKFFSDFGCAMTLGCTIPIIIIIILFGLI
complement(560976..561398)         PHAGE_Lactob_Lj928: hypothetical protein Ljo_1458; LC2W_0555; phage(gi41179295)      3e-12               MNDHIEDLLNQVIDYAWDHNIGCSTIPLHEDQGPLVDTEARLIILNNKWPNANELPFQAAHECAHILNGDNGKLRYTNQYTKSRTENGANQRALSIIVPMYFADIPEESANIDQFMNDLAIPQWLEDSAVQCIERFYENY
complement(561391..561744)         PHAGE_Entero_phiFL3A: CI phage repressor protein; LC2W_0556; phage(gi281416216)      1e-17               MSTYDRIKTLASNRGWSLQKLALKAGIGINSIYRWKKMTPSTENVQKVADVLQVSVDYLLGNTDNPNPDNEGSKPVDLSGTNIFTYQGQPVRQDDWEIIQAILERRNNSSKKRDRHE
561988..562236                     hypothetical protein; LC2W_0557                                                      N/A                 MVNVQLNWTANRNDWKGYLLHLNLSQLDIAKFLGISDQVMAILVKKMTDGQGLTANQIDKDRWKRAIEYVKYKQSQQKKMTV
562278..562478                     hypothetical protein; LC2W_0558                                                      N/A                 MIKPIDAIRNELPVVTSKTLDLFESAVSQELQKRNPKATFQVSILGMAVLGLLVATRLEEVSDINN
complement(562449..563282)         hypothetical protein; LC2W_0559                                                      N/A                 MSKPIDAVAVENISKILGEYTTGPKITKMFSLLGFFDYDLQRQTDNQWFKASTKWRRLDETIRHECNASHNSRPFFRAIQYIARPQDFISKPEEWGRLRYEINECLIFYGYCLDDSGRIASAKTATTFSEAQLRLKTLSARLTELNVHPLVMKFCNEQFLQGDYFHAIFEASKGVVNRIQQLSGIQKDGNSLVSTVFSDKQPILVIKGNMLATETDRDIYSGLRNLLRTVIFLYRNPKAHTPKIYDPSSVDDAVQAFVIMSAAQTMLDSVVNVRDFL
563343..564101                     PHAGE_Lactoc_bIL285: anti-repressor; LC2W_0560; phage(gi13095686)                    7e-42               MKEGNALNEPQPIEQNGQRVLTTEQLAELYGTTVGVVQMNFKRNSNKFIEGKHFFKLEGEQLRAFKNEPTNCGFVGKNASALYLWTRRGAARHSKMLGTDQAWDMFDSLEENYFNPKTRLPQTPEEKLALTMEVATRTVKRIEKLDGRVTDLEEKALLAPGEYNYISKQVNRAVANYLDVHHCKLNAKQRSLFYRDINHGLNDYIGIKTRTQLRKKDFDKADDFIQNWTPSTATLMKAREISLLEDQQQEAI
564102..564281                     hypothetical protein; LC2W_0561                                                      N/A                 MNERPKEKLTNVVKVQDKDVEDQVTGMVIDLLKQKGFTFANFESVVARVKSHYQNNATI
complement(564274..564525)         hypothetical protein; LC2W_0562                                                      N/A                 MVQVPYYDNPGGALAVTVELPHAANVYLVDQANFNAHQRGDHFTYFGGHYDESPVTIRVSGAGRWYLIAENGSGEQYRYTWSK
564591..564947                     PHAGE_Lactob_phiAT3: hypothetical protein phiAT3gORF25; LC2W_0563; phage(gi48697285)     1e-63               MPLLQVVEDDQISSKKYLAVEEEELAKMIEENQELKRKLAARGMWTLTTATSYVEGHNNTWVVNNILNVPRFHKFLQDTVVSYPPPGKKGYLFHPKPWLDFLDKWFPEISRSLREKGK
565032..565235                     hypothetical protein; LC2W_0564                                                      N/A                 MNSPETKLNKKYSPIFGDGISVSANDVQMAVDGIVATLSRHTSNLAEAKAILDLIDLDQYAELKLIK
complement(565218..565763)         hypothetical protein; LC2W_0565                                                      N/A                 MNKYELFSSVVQALTSIVAVVLSTIALIRSSKSERDANKPYIVSFLKVVRSSQTTIIYLMIKNFGRTGATILSVKADPAIDSGQLKFENNPFELFSNQLIAPDQTYAAVISVKNSEIELKTRKFSLSITYSDEFGKKETKDFLLNADVATSFDHITPVPTKTDEVAKSIYITSAERLFNQF
complement(565825..565992)         hypothetical protein; LC2W_0566                                                      N/A                 MQVIQDGQVACQFLWPLFYLISFCDIMRSINVKPHFWPLSVLALSGFCFANYFVD
565944..566258                     hypothetical protein; LC2W_0567                                                      N/A                 MAREIGKQLDRLESLAYKVRTDQYLLDYLREWAETKCDLFRADDPHMTDGEKIQDRLFLKDNFKKYMDILGQTSLDMIKFEADLMDVRQNIADQCFHEGGVDHE
566251..566997                     PHAGE_Lactob_c5: putative DNA replication protein; LC2W_0568; phage(gi418488187)     1e-29               MNEKPGYYAIIPAGVRYDKQLPQGAKLLYGEITALTNKNGYCWASNDYFAKLYSVSIGTIKSWLKCLEDNSYIRRVIKYKSGSKEVEQRFISLAPRSENLPPSVRKLTHPRSENCPENNTSINNTTTLGEPELINFWEKNGFGFISPKNREDLMYWVDDFKKIGSTDEQAVQVVKQAMSNAIDNNVRRYSYVNAILKNWESLRLTSLEAVTAYEAQRTQRQKSKSTSRQASTDVYQNQGDVQDEDLPW
567012..567836                     PHAGE_Lactoc_r1t: putative replication protein DnaC; LC2W_0569; phage(gi23455731)     4e-15               MSNLETNQGRLAAIETFAERCPDCGSLLYRPKGLSKVTGKKMAGVCMNCGYKQPPTEPKNVTPDMEKEARKNRTVGYYLAYSVFSTDAIIAKDFNNFHTDGSLGQQQLKLFAVGLSNKICRNEVVHALIIGDTGVGKSHIANGILIDTQAKTGYRKTCLFIDWNALMQRLKSGMSANAQDVRMKNEKIMHEIGKADVVVIDDLGSERGSDFERQTADDVFRMREDKATIVTTNLHRQDLNKRYGERTMSRMAKHGQGNSFGVKGILDQRKEALP
567836..568354                     DNA polymerase III alpha subunit; LC2W_0570                                          N/A                 MKEYVIMDTEFNSTSNRAIQISAVRIRDGLHIADQFNRFIPSPDKFDQLHIIRTSNMRYSDYLALPSLQQTVRDYVAWMRTTIDIVGWSIEGDAGRIRETFKKGSHGIPKNWKFIDIADIVEKRYSFNATPPLQGLANVLGIPVNRTHNALDDCLRTFGVIKALESRDGKLF
568401..568823                     PHAGE_Strept_phiNJ2: hypothetical protein; LC2W_0571; phage(gi414090240)             3e-18               MDKLNLNLNELADGAIKEKLTKALAQVANNILDPNTDQSKARKVTIALNFKPDDSGVVKLTTDVKTTLVPDISVTTNVLLGRGEDGYMEMNELKSGTRGQEYFDPDDSTLKDDKGIPIKDDKVTDAPIDFRKIKNAKEAN
568825..569562                     PHAGE_Clostr_phiCD38_2: hypothetical protein; LC2W_0572; phage(gi333798150)          3e-39               MTTEADALKFTAEQAVTANGKRIIETKNRQFLINGNGDIREFRPNDGANEALQVHTLTAVVDYIGKVSERSASPLIVQVVDENSVFVLGELDDFGNREVLIKAKAMHPCYPYGQWLDSESFIIALQAQFMTTEDGKVLLKFVGNLKDESAQTMVDDGVSQVATARSGVASVGKVVVPNPISLRPYRTFLEVEQQESDFVFRMHEGPKLALFSADGDAWRNTAIDLVAEYLSEKLVKFSKHVTVLA
569574..569861                     PHAGE_Lactob_A2: hypothetical protein A2p52; LC2W_0573; phage(gi22296571)            3e-40               MANKVERESNSTPLTKKQKSCQYCQEPHKPIEAEDGSFLRIGMSGGNCWDGVHPEKINGAAIHTCTAVGFDNAEVDEPIAINYCPMCGRRLEAKQ
569931..570263                     hypothetical protein; LC2W_0574                                                      N/A                 MNSLLIKLLICAVITVVICAYFFWLLFDHFVSNRRSKTVQIGSTVFIVRIGKKQYVSYFSKCSKEFNTSSEIDSSKLFVLRHDAEAAAEVSGGIVLTLPINIDDPNELKY
570778..571221                     PHAGE_Lactob_phiAT3: hypothetical protein phiAT3gORF47; LC2W_0575; phage(gi48697307)     6e-47               MVRATRYFSPIDHDKTIENAKEVLGNYWHHKRLAQRTKIALRSPVMDGMPKSPSYGNKAEDKLVSHADELYYIACCEGAIESIENEDYRIILVESYLTPKTTRKSSLQLAAHLHVDRTTLWRQTQEALYAFAEICPLVKLDATSVQQ
571222..571233                     attL                                                                                 N/A                 TGCAACAAAAAA
571735..572388                     hypothetical protein; LC2W_0576                                                      N/A                 MSFISGFLTKDFCSIVADGRMSQGAKTVGENYKKFMLAESNILIATTGNAQVADIIKDFIKRLHVQSNGAQLNWQLYVNVIQQFVKETLKEAKDIDGNCVNQIVVICGVNGNKIMALAFGQTDAGYIQREYLPEENEQKFFTMTPPGVNPDAVTKEFISITNKIEIRTYSDIVIVQSKLQDYVAEIDSGKSVNTHKMGMGARIDGINGRFKEWSSGN
572639..573637                     PHAGE_Staphy_phiPV83: transposase; LC2W_0577; phage(gi9635740)                       1e-57               MSPYIHLTLKDRESILLGISTGKTLDTIAKEIGRSKSTVSREIARNGGWRSYSAATAQDRYRRVRLASRRPRILDRPGTRDAVIRYITVLHWSPEQIAGRLSLEGSPIRISYSTIYRGIYLDNLGVPLKSHGARGLPRLLRHRGKTRKIKGTINERRGRFNDVPSIHDRPRSAENRSWFGHWEGDTVRGKTGHSALVTLVDRKSRYLLSKRTANAKADTVRDVMIELLGALPANRVRTVTPDRGREFARYRELAERLNTKVFFPDPHAPQQRGTNENTNGLIREYFPKNTDLDLQSDQEIETYIEQLNNRPRKVLGWKTPSEVFMGKKLHLS
complement(573833..574051)         PHAGE_Lactob_LF1: hypothetical protein; LC2W_0578; phage(gi418489439)                2e-20               MSLDGKVDSTKDKISGKAKEVEGKVTGDKARETQGKAEGILGKAKEKLDDAKDAVKDTVDDVKSKLSTDKKD
574100..574111                     attR                                                                                 N/A                 TGCAACAAAAAA
574474..575304                     PHAGE_Lactob_phiAT3: hypothetical protein phiAT3gORF50; LC2W_0579; phage(gi48697310)     8e-101              MQWTDEQIGDIRKLASEGFTRRETADKLGISYDALQGKARRLGIEFQKPLKNEYDSDGTNRETPSADRKVALNADGSQTVTALMRLKHEPNKDPRTLMELCGYDPDKFEMVLGDYKVYEQHSTEDGTVPQYSIHIRVKPKQGLSINEMAEAFNDKIIPVNYGMKKSGDRNLVIPLPDLHFGWTTFADLKDMVSQLREIIMDGYNEIVIEQLGDLFHSDQIHVTQTVRGTQLDHSNMRQAFHDAVKLFDQIIPLAIEYSNHVSMTAIWQPTGAVHTC
575298..575597                     PHAGE_Lactob_phiAT3: hypothetical protein phiAT3gORF50; LC2W_0580; phage(gi48697310)     2e-54               MLGHVGIMLAHGDVAKNKLTGLFPFEYKKIFNMAKTYELHSGHYHSERFKDDRGIMWRQLGTAKPNDPYEIKNGFTTGKHLLYAFVYDDTRLRCTYELN
575584..575919                     PHAGE_Lactob_phiAT3: hypothetical protein phiAT3gORF52; LC2W_0581; phage(gi48697312)     2e-44               MNSTNAMKRVGYGYVSHTEQAIIEKLSREEKHMQAIIYTKPHCQKCRRTVFKLSRVMPVQTITADADDYERFRKLGYRSMPVVTIYEADGTHDEWCDLRVDKIKQYTEGNI
576060..576371                     PHAGE_Lactob_phiAT3: putative transposase A; LC2W_0582; phage(gi48697273)            5e-08               MTNTAIRYTPEFKQTLIDLHEKGHSFKELHEEYGPSLDTIRKWVQAATVIAIDHQGTAVTNEQFKQLQKENRRLREELDILKRAAVLLAKRWIYSFLGRQANN
576401..577129                     PROPHAGE_Ralsto_GMI1000: ISRSO11-transposase ORFA protein; LC2W_0583; phage(gi17546156)     7e-07               MGRKGSRYTLEEKLFYIGLVREGGWAPWAVQREYGVRHNQVRQWLERFEATGVDGLKPRSVHQKYAEEFKLEIVQKYLAGHTSYPVLAREYGIPDNSVIVRWVSLYTSGQPLQTTGRARPMKDGRKTTQIERIEIAQWTIANDYNYGAAMQQFKISYGQVYAWVKKFKQGGESALEDRRGKAKKDNGQLTEIERLKLENKRLQARLVHVSTEAAVLKKLQELERRNAGQTNNIRPFNNLHKK
577126..578004                     PROPHAGE_Escher_CFT073: transposase insF; LC2W_0584; phage(gi26249410)               4e-24               MNPDAGKLYGISKACRMMGVSRAAYYKWTHRKVTVHEQENQAIRDYIIELEEKNHYVFGVKRLMTYINAETQYHVSHGRVRRIMRLAGIRASIRVAKRDRQVEKKAFLLVNKLYTVNMGHAFHPVAPNVVWVTDCSEITYGKDNKQRLRLSAVKDLHDHSVIAWCVAPTETADLATKTMKLAIENNDGIKPDTVHSDQGTAYTSSTYNTFLAGEGITHSMSRPGTPGDNSPMESLWSHLKIERFSFEHCLSELEMMKRIEAAINWYNNERRQETLNGMTPMTYRNHAVKKTA
578083..578913                     PHAGE_Lactob_phiAT3: putative transposase B; LC2W_0585; phage(gi48697274)            4e-28               MIQDQLSRGHRITVILRALRIPSSTYYDWLKWHPKSRNRRRIKLKELVQVLWQRRKFYGYVRIAKRIRKLLKCRLSDRTIWKVMRELGIQSTMYRKRSKKPTTTTDMPQKPNLMRHLADLSEVVTTDITYIQLINQKWVYLATAYDPKARKVLAWQVGQQMTQDLAVAPIQALIHQGYTFKMVHSDMGSQYTSRLFETTLTDAHLRHSYSRKGKPADNGRIEAYHSLLKREWVRLDQINYESILDVTESIARYNTFYNHDRETNGRGACKRKSAAA
579228..579386                     hypothetical protein; LC2W_0586                                                      N/A                 MLWLIFKCSFWVLLGFIFLCELAAIRISGLCSREEERQEALEKHRQQAKSAP
579475..579921                     hypothetical protein; LC2W_0587                                                      N/A                 MPLLGNVVRFHEAALANAKIMNAKCQLIAGVFCAKERRLNMAESVGIFCAKERRLNMAESVGIWLHDRNLKLISKDRDALSYRIQASWVKDHTDYPIKPGMTVVIGNIKPPNQLKNVLVLKVGSAELKRDGSLVISGERIKSVPKNLI
579933..580199                     hypothetical protein; LC2W_0588                                                      N/A                 MFNLVLQTKDIKEAKRKNGLLEIRFPHPKEKALMLKLRHAVLSIETGWPILPDTTCIGEIVRVLPSKDRVIVAYVRPQNGFQRFVESH
580218..580394                     hypothetical protein; LC2W_0589                                                      N/A                 MAISKAQMNNQKQMLTEILKQQNLAYEDWLYQRMTDEIESHRKLILQALKNLNMKEGH
580396..580623                     hypothetical protein; LC2W_0590                                                      N/A                 MQGKVIALLSAILGFIIAIAGGYAAVKFGLMGIAHMTKDQQKIREARDGMTNVAIGLIVVIFASAAVAWLQGLAG
580666..581907                     hypothetical protein; LC2W_0591                                                      N/A                 MYAKFECSRKLRQFLKKKRQLSLSEAEKMISAADDYAIQNHFKEDVNFKIVSQDGIEYEDNLPIGTGQGWLHNLLLILDHAYQTVLSDQSPEAFNAFSDRVSQELTIEEQPKAVQEALPVVAHQEKAHHLKPIVSKAEEAVREAERPASAAAKQKPQESRKVPSRRQVRKKPIWRLPHLKRPQIGVSAQIIKRSLLAAATILVVAIFMLFLMRPKPVPSYQTLIQNASYVQAAKLYPSKHRDIEARLVKDNDEKSLAAFVQKYPSNNGRFDLAYMQKKFSTVISVSQDADLTAVRKVKLAISYIYQNQPENALTINSEIKSPQLQQLIFLALIHEGKLDQAATLAKSMNNKDADKVLEVGKTYQAAYEKAKADANNSKLSETDRKQALKDQHNWLALRKSLGGKSPYEESTNE
581885..583435                     PHAGE_Achole_L2: envelope protein; LC2W_0592; phage(gi9626524)                       1e-11               MKNQQTNNKKRHIIITTTAVALLGAGGLWAATQAHSDQQATHTSSYQTKMQKPKASKGSQAKKEKGKNTVNDIIDQALGDSNTSTSSEDQAFKSATNSVLDSNPIAAIAKTLDTPAAKASLAAATAAVEPPKALNDNSDDTASVKPLTNDTTETSQTDQGKTNDDGKTPIPVNPIEPVDPDKPVNPITPVNPDNPDNPVNPVDPVNPVQPEQNTAPVLNVPEDQTVSLSHNGTFDVLNGITASDKEDGDLTKAIKVTGNVDLSKEGTYTLTYSVTDSAGQTTSAKRVITVANDLPVISANDQTVEVGTSFDPMANVTASDVQDGDLTKDVKVTGNVDTTKLGTSQLTYSVSDHDGGQTTKTINITVYAKDASFSGLDALTVQQGSTPDLRKGVSVSDPYSATPSDFTVTTCDTKTPGQKSVTYSYVDKWGHVTTQDRVINVIAEKPVFKGLQDQTIKLGDHFDPMAGVSATSTNGPVTISYEGEVNTQKAGRYTLIYTATDQNGQQTQQTIVVTVE

#### region 2 ####
923273..923284                     attL                                                                                 N/A                 GTTTCTAACCGC
923395..923406                     attL                                                                                 N/A                 TCCGGTTTCTAA
complement(930899..932038)         PHAGE_Lactob_Lrm1: integrase; LC2W_0941; phage(gi195661224)                          7e-82               MATISITQENTGKWRYRVYYYDNQGIRHAKSKRGYARQAAAKRDAQILASELEQGANMLDREVGFVNYFEEWLTRYKRGKHAKVTENRYDYFKAALEEFFGVAKLKDITLDRWQDFINSYGKTHAKDTVRKINAYVRGMVKAAINNQILNRDFTQGVEFVGKAAKDPGLKFLELPFLKKLKDLVYKTANFQANTSYAIAVGLGTGMRYSEVVGLTWADVDFKNQQLNIDKTWDYHFGQGLMPTKTPSSVRVIDMPEDLTQLLKKLKKEQTEAFMAQGYRDPLNLVFRSTRHLVPTDAATNKMLKSYQTQIQVPAHKQITFHGLRHDHVAYLASQNVDIYYISRRLGHKDVSMTLRIYEHMFKKAEAKQVKKTLKALDNL
complement(932156..933223)         Abi-like protein; LC2W_0942                                                          N/A                 MKADKPFKTYGEQIAKLSDHNIIVPNGQEAYVKSMLMQYGYYNLVNAYQDKLEHTDDEKFCPERPFNLFSTIKQIDEILSGILLPLVIHFENTFETSLSYHVAETFGVFHKGHPGERGYLSPKNYPRLNMSPTPTLRKLREFATGLHKTKHDGQDETEPSRFRVSASLEMYREKHNHVPPWILVNDISFGLAARWYTICPPEIKRAVLEDLYPRRNITDEEALKLLRDGLDVAQDFRNTIAHGTSILKTRLSYPTSDSKLSPSVIGAVNDTAILSSRDYANGYGQSDIFSLLLVLAIFTNEYEGLLSALRDIGNLNRLRNSEFIEIQHMVMNDVIGFPPESDLRIKKLIEFCRNK
complement(933368..933799)         hypothetical protein; LC2W_0943                                                      N/A                 MTMEVNGKVVRIISKSEVIIDIGRDAHVEVGDKVEIIVVGDKITDDNGRSLGYFTFQKDSLEVTHTEPSFAVAQKIHVEHASGPYANLFSQMSKSLTQIYGTSTTSKTPRDLDIQEDEIKPLAQTTLEDKTIHVGDQVRVFTS
complement(933869..934351)         hypothetical protein; LC2W_0944                                                      N/A                 MSIKIVVLKFDAYDGELVPFDPFSTDPLPVEYFQVRLFVRAPYYSETFDDQTLLVRRYMRRFKEIKNRFIKKIAPEMEDLGKDIEENLQRIKSTVTTLREMLENELVIPDQIEIGSIELVGEWPIFEPAKESQMKLELNKQDLKDIQALRETNDRKNLNN
complement(934355..934648)         hypothetical protein; LC2W_0945                                                      N/A                 MNNLLIQHQLEDSRPIRTYKAKIVIKLLEDNQTLPRNERTSQVQVLREASQKTDELVQKVMATSKHDRTAFCRDQCWLYQIREERINKILEQLAKED
complement(934832..935692)         hypothetical protein; LC2W_0946                                                      N/A                 MEKVNYKDADFLAHRIEVFVRNHFDNAIEYNAVPFILAEIQKLPDDFFQFPLSDGILGTTIVDSAVTVTINSNIDNNSRRYFTYAHELCHVLLDTEYLRSNPGIDVQDDNGLPNASNYSRERRANRFAALSLLPDSVLNAVMIEGKTKKYIHERQKVSYETLKYRIVDFVQSRFLLPRSLSIKLAEAFTGTEQNRRTRASISGFWNEAEDAAISELSRERIIKKNKDLVLGIVDPLILVDRERKKEIKERNRQSKNVYDMDPEIGIHMLAEYIDDFDISDIDDADF
complement(935679..936047)         PHAGE_Lister_2389: Rep protein; LC2W_0947; phage(gi17488532)                         5e-05               MSALYDRIYSLASTRGMSIPEVAKKAGLSSAIIYRWRTNDANPTKPSLIAVATALGVSEDELVGKKEVDPQEELASQVGALFRSVVKQQDLDEDHSKDLKEEMEDLLKVRAKRLREKQNGKG
936303..936500                     hypothetical protein; LC2W_0948                                                      N/A                 MSTMLKRFKKQLIDLDLTQAEVARKFGWSSQYVRDLMGGMAFGPAAERNRAAVIAFLAKVKEESK
936497..937219                     PHAGE_Lactob_phiadh: hypothetical protein phiadhp07; LC2W_0949; phage(gi9633007)     4e-38               MNGLVIMHEQQAVTTSLKVAEVFGKEHKVVLRAIEDKIQSAQNYADYKKMFEASTYTDSRGREQKVYFMNRDGFTFIAFGFTGKAADQFKLKYISAFNAMEKTIKSLPIKKLDPVKQAEIAMTNAKTRQANALYRIAMKAGSISSQQALLAKAAEAITGEMVLPTMRTEEFSATQVAEKLGITSNKVGRIANRIGIKAEQPGQNEFGRWSASKSQHSDKEVPQWLYTKKGLAAIRSAIKE
937548..937772                     PHAGE_Lactob_phiAT3: hypothetical protein phiAT3gORF25; LC2W_0950; phage(gi48697285)     8e-06               MSEWWSTKDVVKRYKHDMRWLKKNILEKPEFMEILRYRMVMYAGDGGKDWTFEPVKFSEFMRNYFPEIAKGIGE
937772..937864                     hypothetical protein; LC2W_0951                                                      N/A                 MIGYLLIAGGFGVIVGHCLGHKGNWRQWIE
937861..938073                     hypothetical protein; LC2W_0952                                                      N/A                 MSLHQWDNINDLHHAEKSGWGEESKFEELEDYQGNALHPGHTYWLYQGELFDEDEALEFLDSLGATQVIN
938083..938958                     PHAGE_Entero_phiFL1A: endonuclease YqaJ superfamily; LC2W_0953; phage(gi281416339)     3e-62               MKPKYISTAKLNHAEWLDFRRQGIGGSDVAAILGMSPWRSPYSVWAEKTGRLPINDSGNEFTHWGTIMEPILAKEFEQVSGKKVYRQNKTFYRPDHEFLRANIDRDIVGEPGFLEIKTAMEYKSSEWADDNIPIAYQLQVQHYMYVLDRPYVYFAYLVGGHSFGWKKVDRDQQAIDTFEPMLIDWWTKHILHDEEPDIDGDKATTAALKSLYPDEDGEVIQLGHDINQLLRNREELSNSVNSTSKLIDAIANRVRQEMKDASAAETEEFRITNHKNKRGSRVLRINKKKED
938961..939155                     hypothetical protein; LC2W_0954                                                      N/A                 MDYYNVAYDLYSNHGHLSGEADHVYVPDGTFGAVTIDDKDGSSLIVMSSEIQHLRITPIKEDED
939155..940042                     PHAGE_Lister_A006: gp42; LC2W_0955; phage(gi157325459)                               1e-61               MATTSLQKQLNEVSQAKGKSSAGSVVKDLLSAPAMQKRFNEVLGKSAQQFTSSIINVVNSSQQLQGVDAMSVISSAMVAATLNLPIDPNLGYMYIVPFNEKDKATGKYLKRAQPQMGYRGYIQLALRTGQYKSINARAVHEGEITNWDPFSETYERGEKTSDKVVGYVGHFELLNGFQKTTYWTVEEMDQHRKLYSKSGNYNGQRSGVWKSNFDAMATKTVIRDLLSKWGILSIQMQDAVVKDEKPQVYDAETGELSTDPKWASNATEDEDPDSVDPETAKKAEDFFNGDDSVDK
940051..940296                     PHAGE_Lactoc_lato: hypothetical protein P335p08; LC2W_0956; phage(gi30089869)        4e-14               MAIRNNLAVLLAERKLKTSQVAVDTGISLSSLASIVYNRSKMIQLSTLDILCQYLQVTPAEFFVYDSHPTSPDWYLSIKQR
940301..941146                     PHAGE_Lister_A118: gp49; LC2W_0957; phage(gi16798836)                                1e-48               MADGGWIKLYRSIRSNWIWANGNERYAKWWMDLIMMVNHEPRKVLVNGNLITIGVGQRLTSIKKLSETWGASRNTVDKFLRLLVEDKMIEVQKSRTSGTSIKVLNYADYQTFSPEKSKRSEQGAEHQPEQRSEQRSEHKQEPKELLKNLEKEKEKKSLSSLGRGDLVKFWENNGFGMISSKTREDLMYWVDDFKKIGSSEEQAIAIVQRALDISVDNNVRRYNYANSILQNWESKKLTNVEAIKALEIKRQQDKQQHAIGRNMESQVYHNQGDVSDDDLPF
941184..942005                     PHAGE_Lactoc_lato: putative DnaC protein; LC2W_0958; phage(gi30089873)               4e-18               MNGLQISPSIWAALETFGELCPDCGKPLYRPKPLSRVTGKKMAGACMYCGYKQPPTEPKKQKPDLERKARKSRTRSYYLAYSVFSSVDVMGEDFSNFRTDSIGQQQLKLFAVGLANRIARGDVIHGLIVGDTGVGKSHIANGILMDVRKKTSYRKNCLFIDWNALMQQLKSGMSDNAQDIRMKNEKIMREIGKADVVVIDDLGSERGSNFDLQTADEVFRNREDKSTIVTTNLHGQDLKKRYGERTLSRMAKHAQGNSFGVKGIVDQRKEGMS
942002..942301                     hypothetical protein; LC2W_0959                                                      N/A                 MSDLRITKRDEKDQSSDWMTLVHEEDDQVLIDLLSIAKSKIAYAGIYLDREEVKTLANWLDEFLYSTRENGTPALTEKTQQRKAGKFDDENTQYFGRLK
942264..942548                     PHAGE_Staphy_vB_SepiS_phiIPLA5: hypothetical protein; LC2W_0960; phage(gi399528947)     1e-13               MMKTHNTLDDLNNHLFSEMERLNDDTLEGESLEQELRRADGISKIATQIIGNARTILSAQVAYQNNESADPTMPRVLQMNEVTENGKALDGVRH
942535..942864                     hypothetical protein; LC2W_0961                                                      N/A                 MYDTEYWRRNALFTLEEEHRAKQIIPGRTWAEATRQINFEFEMNLTSRQVRNWGHRHHVYAAEIIDNSEPDFKIDPVREHRNKLLKVNQTLNRLNSVIKSQRVRSWRYV
942857..943435                     PHAGE_Bacill_phBC6A51: hypothetical protein BC1875; LC2W_0962; phage(gi31415769)     3e-19               MSRLLDDKQLKAYKKFVPGHTGAEIAKMVYENWGIQLTVQKVHALNIRNNIKSGLYQKYFGKADPRRSSSHHDLHKRMAIGTVKRNETRSKDRPNRAPIVVVKQAERKWKPNHRRVWEEAYGPIPKGYKTVFLDGNSLNFSITNLALVTDAEFLVMNDKHLISSDKRVTRSGIALARLLSKTYQVKRKKGSN
943449..943871                     PHAGE_Lactob_Nu: putative Holliday junction resolvase; LC2W_0963; phage(gi78000012)     6e-43               MMIQINIPGEPVPQGRPRFASRGKFVSTYDPPKSKAYKNEVAVAARDQYAGEPLSGPLICRVTIYRPIQQTGSKRLKRDKAAGIVRPVIKGDVDNYFKAVTDPLTGIVWVDDAQIVEAHIAKFYSDEPHVEIYIEQIKEV
943876..944139                     hypothetical protein; LC2W_0964                                                      N/A                 MTELKDNSITVFGNVINSTEKTVNKDQVVELKVRIQAKELDGKRDSFAKVLKGNAQMVFTPSQTELDVDGDKPADGQTELLDDKAKK
944163..944486                     hypothetical protein; LC2W_0965                                                      N/A                 MNNMAKTLRREDQRAFDTWFNRWIKNTRLEQSLIEAARKGYKSLIVYDRKNDMDVYQKRRFEDSRFVKRLQSELPDLHVELRQYLDKNAFGFSFNAYKVAVSWEVLK
944565..945014                     PHAGE_Bacill_WBeta: conserved phage protein; LC2W_0966; phage(gi85701424)            1e-23               MSREHKSRFEWLQDYLELDDEIRYLEWKIRKSNAEVDRWSEGDLSRLHVSGSDSRAAHVGEEVPELQTKLTECKAEQYDLLKLIDSFSGYENQILKMKYVQGKSLEEIAAELGYSYETVRAKHAELHRRLDWIDEWEDRRTRLENRLDY
945239..945619                     PHAGE_Clostr_phiMMP04: HNH endonuclease; LC2W_0967; phage(gi414090491)               1e-14               MAMVPRDISEPFYHSKEWKKTRAAYIASVGGLCERCLKRGIIKPGYIVHHKHYITADNINDPSITLNWDNLEYLCFDCHQEEHFEKTASVRSDVMFDAHGQLVPVSRSPLRSHKKLLKKERHATHE
945677..946063                     hypothetical protein; LC2W_0968                                                      N/A                 MSRKMSIEKQDVAIQLEYERLRQTLSGISAEKLAAADNLIQRCAFMTITLQILEDEVKSKGPTILMHNGKQTMRVENPAQKSYNTMINRYTAAMDKLLSLLPRESAIMPADPNKESDGFDDFVEERGE
946066..947796                     PHAGE_Clostr_phiMMP04: terminase; LC2W_0969; phage(gi414090443)                      8e-126              MADIQVKIRVDRHVGYPPDYDPITQYWQSFVQNGGDQVVGKKIYRTYKKLIADMHNDNSEWYYSNRRGNHVLEFIENYCRHSKGPAGGKHIVLELWEKALLAASFGFVDGAGFRKYQRVVLIVGKKNGKSLLGSAVGLYMQIADGEAGPEVYAVATKKDQAKIIWNEAKRMVRKSPALAKRIKTHVADLSSEEYNDGVFKPLSSDSDTLDGLNSSCILMDEIHQWKNGEPLYNIMADGITARDQPLIFITSTAGTIREDIYDQIYDDAEMTIAGYDQPEGYRDERSLFFIYELDKRAEWRDEKCWVKANPGLGTIKNKTTLAERVEKAKANHRLVKNLVCKDFNIRETATESWLTFDELNNEATFDTLKLKPRYGIAGADLSQTTDLTCATVIFQIPNDDHIYVKQMYWLPEDTLEQRAQEDNIPYATWRDQGLLRTSQGNKVYYRDIMDWFEELEQEYDIYLFKGGYDAWSATYFVKDLEFRYGEKTFDAIPQGVKTLSSPMHSLGADLRSKRIVYNNNPILKWCLSNTTIVTDRNGNIQPDKGRNKRKRIDGMASLLDAYVVFENNQEEYQTLI
947815..949050                     PHAGE_Clostr_phiMMP04: phage portal protein; LC2W_0970; phage(gi414090444)           6e-115              MAFWNNLFHRKNSGVTVTPEYKLVTNYGNGFFGWNGKVYESDIIRSAIEVKATTIGKAVAKHIRSGTGDSIVVNPDVYIQFLLSDPNPLMSGQMLQEKMITQLELNNNAFAFVQNDANGMPTAIWPIVANSVEAIQDNQGNLYLKFYMQNAQTYTFPYAQVIHLRKDFNKDEIFGESNGPTLAPLMEIVTTTDQGIVSAIKNSAAVRWLLKFNTAMRPEDIEKNTKAFVASYLQTQKDQDSIGAAGVDAKTDATQLQPTDFVPNAKQMDATVDRIYSIFHTNKAIVQSSYTENQWISYYESQIEPVIRQMSEQWTSRLFNRRQRSFGNSIVFESSDLSYASMQTKLSLVQLVDRAVMTPNELRGFFNLSPVPDGDKMLLRKDTGTVPSATGSDGAPDPTEGGDDNDDSGTD
949028..949735                     PHAGE_Lactoc_bIL286: protease; LC2W_0971; phage(gi13095787)                          5e-45               MTTVVPIKGDIVTNDYGWLYDLFGDDYASPKSVSDLINKANGDDLSVEINSGGGILDAGSEIYTMLRAYKGPVNVNVVGVAYSAASLIAMAGDVVAVSPAGMMMIHNVSSGQMGDYHDMQNAADSLKKSNIAIANAYMAKTGLSQTEILDLMDSTYWLDPQTAIEKGFADKMMFDNAEKPGKMIMTASLNKIPSLATLNQMKHFRNTTALKKAPSDDDQMALLNAEYNLLNLKGE
949740..950969                     PHAGE_Clostr_phiMMP04: major capsid protein; LC2W_0972; phage(gi414090446)           1e-71               MNKEEYLKQREALMNDARTAIDKGKSEDANKAMKSVKDLDAKWDQQTKDQANLAALDDHAPITLAQVAPANDIVGVGKSLENTKLNTVAKTKPTYDKVWAKTLLGHTLNTAEQAVFDKENARLNGAPFSHQTGNTPTLIPNTVAAGIWKIAEEQYPAFADAKKFNVSGTLTINKHDGIVSGDAQWVDENTQADDEQNKFSQLVLKGYELNKVATVSWKMKSMSEEDFISFLTQELGNRLGVALGVAIHQGDGKNSPLGIETALKAEKGTPQVATYKDQIAYKDITSTMAKIHSSFAGKAAVYANSKTIWNQLANIVDGQGRPLFIASPINGGVGSILGLVVKPDAGVNDGDVLIADVTDTVVVNINQALTVATEDHVKGRSTDYGAYAIADAGLLTTKGAALLTAGPKV
951043..951291                     hypothetical protein; LC2W_0973                                                      N/A                 MADTPDRSAEFLKALQKGKVVAVGNKGTGEVDVTGLADGTVVKDGDYQVVFDTDNTKTLSSVASDPIDAPGATVPTTPPSLG
951305..951631                     PHAGE_Bacill_phBC6A52: hypothetical protein BC2588; LC2W_0974; phage(gi31415853)     3e-10               MADEKSEEEPTLLDLLKQHIRLEDDMDPSMLQFYLDAADKYVQRKVGHSVKYLQLMVATVMNDNRSAGDDLAAALEALEPIFYLEVRTDDPDSQSNEPTQVDSHTVGT
951570..951908                     PHAGE_Bacill_phBC6A52: hypothetical protein BC2589; LC2W_0975; phage(gi31415854)     3e-10               MTQTVNLTNQLRWIATLLELKDGVDAHDRPKQTWEDKRVLYYADIGITSTEKYLAQQNKQDVVLRILIRRDMSITQGGNRVRIRGTDYKITRIYETPDNQRMELSLDYVDHI
951892..952221                     PHAGE_Bacill_phBC6A52: hypothetical protein BC2590; LC2W_0976; phage(gi31415855)     3e-11               MLITFDEFLARLKQLGAVYRDVAPRTAKYPYWIYTYTNTQRLVASTGTRLIVNEYQVSLYTKGVEDELLPFIKTFDDVPFQSFRGIPGDENDETITDLYTYIEVIAGGQ
952211..952594                     PHAGE_Bacill_phBC6A52: hypothetical protein BC2591; LC2W_0977; phage(gi31415856)     2e-11               MVNNNGFETMAKYLSGIKVDESVSKEGLVAAASQFADKLRPELPSEPNAPLAQTYGTLRDKLQVVDKGDHIQVTFGNAFWWLFLEHGTSPKNHQGIRARNYVHNTFAANKNTIMQTMVKPVMDALKK
952606..953253                     PHAGE_Bacill_phBC6A52: hypothetical protein BC2592; LC2W_0978; phage(gi31415857)     6e-12               MSDKPSKANDIELELTIGDMFFAMKKQNETASTDPVFDTSVIRIPNIKKIAFKGNGKSNDIYASGKKFGTITQETSIEVTHTHIGMPIAVLDAMKGIAAKHGVEFGSTLAQSMPEFAIGFDTWLANGQHDGIWLTSCTLNPAVNETHATSEESFKEVNPDVVYNAGGLRNSSIYYSRYNSARDSADLTVDDFFKQVIFSPEQLETIAKQKPIPKV
953330..953695                     PHAGE_Bacill_phBC6A52: hypothetical protein BC2593; LC2W_0979; phage(gi31415858)     9e-21               MAKLSDLVRLRDNHFITIQGAKVPAAFTFASIDAIESAYGQGYKTFEKDLNLMLKRKVIHRDQKTMKLIWALVYGLLVGGGTETTFDEMNRAIPFSEIPSVIQEAMDILNEQNFQLSDIKK
953776..953937                     hypothetical protein; LC2W_0980                                                      N/A                 MGYSLQEFMKLTPNLWLKQYLIYIEINNPDGIYKEKPKPIRKQVTLDDIPFFN
953957..956929                     PHAGE_Bacill_phBC6A52: hypothetical protein BC2594; LC2W_0981; phage(gi31415859)     2e-78               MADETQNVVLDFKMNGQVQFANTVKDINAVMNTAAKEYRAQISSMDENASSTQKLAAEQQKLQIQSEAAAKRTQILSEQLKTMQDRGETSGSSFDRLVGKVADAQRVENNLKGALDQVNSQLSEQGSKANDAKDHISNLQQEEGELDSKLKLASSSAKLENAQLGDNASESKKTAAAQRQLSEQIDLSRQKVDNLTQQLKETVTAYGKNSAEANQMATRLNTAKTSVANLENQMSGLGEKSKASSGALGTLREKLSLGAIAGAASNAVSAVTGGIGQLVSEGIEASDSMNKFDSTMKLAGFGKENIKKAGEAVQDYANKTVYDLATVSNTTAQLAANGVRDYTGLTQAAGNLNAQAGGNADTFKSVAMVMTQTAGAGKLTTENWNQLADAIPGASGKLQEAMKKNGAYTGNFRDAMEKGEISAGEFNKAISDLGMTKAAKDAAASTATFEGAFGNLEANIVTGIQNIITSLGKANLTNMINTLSNGVVGAFKLVVSALKTIQDHATAFKTLAVSVGVFFAAFKTVQTINNVVNVMKEFNNITKISTAVQKAFNLAMGMNPFTLIVAAIVAVVAALGYFFTQTKAGKEVWQNFITWLKSAWTGVVNFAKNLWTGLSSFFKQLWTSIKRIFTIAINAITNFLKPAFTAAANVIKSIWNGIKSFFSALWNGIKVIFTVAITAIAVIIGTYLNIWKTIITTAMNLIKGIITNVWNGIKSFFGPILASIGNVIRSAWNSISSVTSSVFNEVKSVVSSIWNNIKNVVSNVVNAVKSVVSNAWNAVSSTTSNIFNSVKSAVSNVWNSIKSTISNVVGSIRNAVSSAWNAVSSVTSNVWDSIKNAISGPINTAKDIVRGAIDAIRGFFNFSINWPHIPMPHFSIQPSGWSVGDLLHGSIPHLGIDWYAQGGIMTQPTMFANNNGRAQVGGEAGPEGVIPLNDDTWNKMGAAIAAHMPSQGPITLQVDGRTFATITGPYTSDYLKQQDATQNFSYGRRL
956936..957631                     PHAGE_Bacill_phBC6A52: Gp13 protein; LC2W_0982; phage(gi31415860)                    5e-20               MVELILDGQSLAQSVPGTLVTKKPNIPAAQRDVKFTDVPGRLSGSLTEKRGWKDITWSPELQLVDFKTLNQSWRKTRQLLQSASKLVLSDDPDFYRLIKSVTIGEFSVDDVEVSGSYKPSFTLDPLEYQMTDPKTFKANFDIVNPGNVAAEPLLTVSGSGTVKISVNTNQFSIDSLTAPATLDCAKHTATMADKDITTSTAGDWPLFVPGVNHVILTGVTSITVQPRWCYV
957628..962034                     PHAGE_Bacill_phBC6A52: endopeptidase; LC2W_0983; phage(gi31415861)                   2e-67               MSTDIELYPRDQTDFSHHGYALDDISNDIVTWQLNAKFTLTFDYPMFSEHAGDLVAENIVRVPVPGGKAAFRIAQVIKSMGHLSITAYHVFWDLNDDFIADTNIVDKDGQGALDQIMHAANYPTGFKVLSTIGNVTNARLVRMSIIKALLGTDDNSFLNRWGGEFDWQDFSFSVNPRLGKDRGVHFEYAHNLTGYEATKDSSGIITRLLPEGYNGLLLPELYVDSPKLGNYRKPKIGTKTYQDIKAIDETQATGDQEGAVPVQEAYELLRAAAAKEFSESHIDEAQWTYKLNVALLENTEEYKDLSITTTVLPGDTVTITHKLDGIDVRARLTGYTWQPSNHSYLTQTYDSTSRPDVAYSNLSSQVNEIKSQIELVDKVVITKAANGMNSTGWGDQSPVDLNIAGKTGDVYYQTTTNGTIMWLFHDGQWNAETGDAFGTEVQKKVDAAIADVAAAEQAANDAVDKANSSTQLASMSNQTAQAAKSAADSANALATQAVSAASDAKTALATANSALETATDQKTTVATLVTKTDDLAGTIATLATKTDINKLSGEVTAAQTLAQQTADGLQLKADQSVVNTINGSVNQLRADLKVANDRLSLTMTKNDVTGLLTPYATQSWTQGQITATASQFNAQFSSISGKVDALKFGNRNLLLNTSNMINLAHWTRTSWGSATTIVKLSTHPFYHNGRDNLIKLTTTDSWDGHLRSDVVAVKPDTDYNFQFLGFHNYNVKSITVYFLGRTDATSPGDAGDNYDRDKIHLLMNAITLSTSGTKRATATFHTNPGETLGYVRFDMNGGYNATDPADMYMVEAELAEGPTVPVYSPAPEDSADYADAKVASLKVTVDGIQSTVANYQGQTTTALQTLQGFQTTATDRINGLKLQQTQLASQWTSVVSGLSNPNLILNSMYPEDVSKLGWIDTGYLNITSHAFYAGGGQTLFSIKSTDARERTVSTNRFKVTRNTAYTVSLKAFANWNTVGLDIFVMMRRRGSAKDYDTFQLLINNQKLSPSETLSYSAIFNSGDYDEAFIRIDNNGMVDTSGDAAYLFFAEPKVELGSMATPDVQSGTDSQITQLQDAINLRVSKNDVLSQINLEAIRTLIQSGKLVLDAPTVVFTGNAFIPSAAIASLSADKITTGTLNAANLNVINLNASAIVTGTISGANLAINLNTGEVLFQKGSIKSTNGLLNINIDNGTFAQGDGVKGMLFTQGELYLSTSSMWASLMGGGDGAVPDYGKIGFNQAIVGQGLLIEGKHVLTLGIHKDNWPSTVIAAPPSLMMSDTGWFYLNGQGTLVQIDGGDKYEVNGFSSQPAIYIGTNAPTWNKGPKNRIVIDAEYVHIRSVYDMTTSSSPNVFVASDGALVRSTSASKYKVNIERTRSTDLAERLLTVPNAHWLDKAAMERYASGEQKELPQTNFGLIAEDLEAAGLEDLVVRGPDGELEGIQYDRIAAALLPLLAQMKTEIDELKATA
962063..962488                     PHAGE_Lactob_LP65: hypothetical protein LP65_gp096; LC2W_0984; phage(gi56693144)     5e-10               MKITLENANIANVYRLVEQIKVKGRDALALAKFIKLLKQTLKSAGEDEQALVAQYALKDENGESKTDSNGNIQLNPDLAREYNKVHGEWLEQKAEIEGGTYVNHIDDVQRIISDYVDENEIGGPDLDAYLALYEAFEKGEK
962491..962760                     PHAGE_Lactoc_bIL285: Orf59; LC2W_0985; phage(gi13095739)                             3e-13               MTLKTNKSISLTGTSTIGDVQVAYLNATIDQEGNGANTVNQSIQNQALYDANKKEVRADIAEFQQLLYDTEDSLTSEKKGTDSSKTSEN
962806..963099                     PHAGE_Lactob_Lrm1: hypothetical protein Lrm1_gp17; LC2W_0986; phage(gi195661217)     3e-43               MTFLGYTMADWAEFISIIGVGVSAGSWLFKKIALDPLRSDIQMLSETINRQLKLHEQSLADLNAHLKTHDDELGSHSVRITRLEANVGIKGENNHEN
963089..963523                     PHAGE_Lactob_A2: holin; LC2W_0987; phage(gi22296539)                                 2e-55               MKINWTVRVLSVKFWLAVVPASLLVVQTVAAVFGYNWDFASLGKELTAVVNAVFALLTIIGVAVDPTTEGVGDSQQALAYPALITTKAAKIKALEDQIKALQADKAADQAASESASSAAPAVAPASSAVPESVSAVPAEGQEAK
963523..963711                     hypothetical protein; LC2W_0988                                                      N/A                 MEQLKAFATQVVLSLADKDETNESKKRRAVALLHEKAKSLGLDASEQDIDKAVEEAYTNEHS
963698..964672                     PHAGE_Lactob_A2: lysin; LC2W_0989; phage(gi22296540)                                 2e-63               MSIHDWFDRHIGTITYSMYGSRNGADGTADCSGSVSQALKEAGYNISGLPSTVSLGSQLAANGFTRIHVWAGGGDNGWDVSMDDIVLMSWSSAGMAYSGGAGGHVGIIHDDAETFESCDYWTGGQANTAITRHDVTAYINNSISNGLRYYEVWRKGGSTPSAPVQNNTAAVKKVNVTYGLKLKNGGWLDPVTNFGAGDEGFAGLPNHAHDLLYIRVDHGGLQYRVSTLEDGWLDWVYKGDPNDTVNGCAGIVGHTIDKVQMIYLTPAGEPYQQAYYRTQTTARENWLDVCCDDGTSIALYDGWAGMPGEPLDRLQIGIGSVSPF
965194..966705                     Glycosyl transferase group 1; LC2W_0990                                              N/A                 MIYFLDEYLLAKNSSVEHAALKRLALFKQFKQPVKILTRDYDRLSVQTLRELGVAQTDVRNMFDYFQHVPADRSEKAVHNDEINLPTMDEVSVDANQSQVTNGDRLRRQVGYIPGTVGHVYYQNFLDDQGNLVECDLWDARGFKSATQYFGQDGLLAFERYYDLRGVPVLDIYYVGDHAGQIQISRIVLKGQTLKEDHEFDTLGELFSYFLDQLATEDSETTIFISDRPGIGVQPLLAMHAAAKKFVYIPINHVLTPDKPRQGELDGFIQPVLQHPQKVDGLIVQTPQQQHDLHDRFPKVRVAAIPAVTFDPALTARSAAAAASKKILFVGRLSPDKQLDQLLRAVALASRQVSGVTLDLFGYGDEQYQTAMRQLADRLEIGSQVTFKGYQSSLADQYPQYALLVNTNLTDGGPLALVEAQTHGLPVVSYRFSYGPSACVIDQETGYLIKQGRVNDLAEAIVRLLKRPEQSQQFGDHARALAQKQLAPEKVYARWQAFLGLES
966733..968292                     Poly alpha-glucosyltransferase; LC2W_0991                                            N/A                 MYYFLNDQMAYAKSGIEGAEIQRLQLFKANQTPAKIVTRQFALDLHDVLKDAGIDDTDFINLFDYFCDLLSTPWQQVTVADVCQPTAGVTRRREGRQVIFSRGSRVIRIVYLREKAGREQEVSNVQYFDVTGRTIKMSWWDTRGNHCLDQYFDQGGKIFQEHYLDRHGRTRLEKLHYLNHSQQEKFSWKLVDFHGVDYLFDGLHDLTRFFYDQLNQVDGGYNVFVCDRTTETGWGLLHMTTPALKVLHLHNNHVAGNEDMLHAKLNNFYASALTHLNRWDAVIVPTPQQAQDMAARFGTATPIFTIRVAFVKAADVAANRLPFSQREQHLVVHVARLAPEKQQASSIRAFAQVVKAIPDAKLELWGYANGDMAPKLHALVEKLHLADHVFFKGYTRDIAAVYNRAQLGLLPSSAEGFPLTLIEAQAHGLPMIANDIHYGPADILANGKSGLLTQNGDIDGLANAIIGLLNDSTKLAQFSAAAYDNALRFTDTSTFVQWQKLMAFAAKKKTRLAAFEHVD
968389..968862                     PHAGE_Canary_virus: CNPV087 putative glutathione peroxidase; LC2W_0992; phage(gi40556025)     2e-20               MSIYDYEVTLEDGSQYALSKYKGRPMLIVNTATKCGFAPQFDGLEKLYDKFKDQGLVVLGFPSDQFKQELADGHAAAEACRLKYGVSFPMHDLIKVNGKEAAPLFQYLKTQAPGELGKSIKWNFTKFLVDRDGQVVARFAPKTKPEAIEPAVEKLLG
969239..969250                     attR                                                                                 N/A                 TCCGGTTTCTAA
969329..970534                     Aminotransferase, class I/II; LC2W_0993                                              N/A                 MEELPADVAAFVETHLVDRRNSNAVKWDGLAGEFGRTDLLPMWIADTEFKAPQAVIDALTARIQEGTFGYSIRPQSYYDAFIDWEKTRHGVTVQPEWMRFGVGVVKSLYAMVNWLTEPGDPVLIMQPVYYPFMNAIKDLGRKVVSVDLQLTADGWRIDFDQLEKTLATQNIKAMIFCSPHNPVGRVWTREELERLFAITSHHDVTVVSDEIHGDLEVSGPKFTSALQVAEGPARSRLVVLNAPSKTFNLAALLNSHIIIPNEKLRTAYDDFIKQLHPVDTSLLGQVAGEAAYRHGGAWLDKVLQVVRYNYQQLLTGLKQSAPKATVADLQGTYLAYVDIGAYVAPAKIKSFVEDVCGLAVDYGAWFSPKTATYIRLNLATDPKLVAEAIQRLTEHLAQPQL
complement(970551..971549)         PHAGE_Staphy_phiPV83: transposase; LC2W_0994; phage(gi9635740)                       4e-52               MSPYTHLTLKDRECILLGVTLHHTYQVIADQIGCSKATVSREIKRNGGRGAYSAVKAQQNYQQRRLKSRRLRVLENLKLRDFVLHCILQRQWSPEQIAGRLSLENSNWHISYNTIYRGIERNNLGVKRKSHGARGFARKLRHRGKTRKVKGTVNERRGRFNNVPSVHERPVSCENRTRFGHWEGDTVRGKIGRSGLVSLVDRKSRYLLSERVPKVNAKNVTQAMIDLLHTVTPKRVRTLTPDRGTEFAGYREVGKELGISVYFPDPHAPQQRGTNENTNGLIREYFPKGTDLDELTDQDIAKFVRDLNNRPRKVLVWKTPSEVFFGKKLHLI
984910..984921                     attR                                                                                 N/A                 GTTTCTAACCGC

#### region 3 ####
1044589..1045179                   PHAGE_Strept_1: head maturation protease; LC2W_1066; phage(gi28876177)               4e-13               MLVPTVVEQTSRGERAYDIYSRLLKDRIIMLSGEVNDQMANSVIAQLLFLDAQDSEKDIYLYINSPGGVITSGLAMLDTMNFIKSDVQTIAIGMAASMASVLLAGGTKGKRFALPNSTILIHQPSGGAQGQQTEIEIAAEEILKTRRKMNQILADATGQTIEQIKKDTERDHYMSAQEAKDYGLIDDILVNKNTQK
1045283..1045354                   tRNA                                                                                 N/A                 GCGCGGTTAGTGTAATGGATCGCACGTGAGATTCCGGTTCTCGAAATCCGGGTTCGACTCCCGGGCTGCGCA
1045339..1045361                   attL                                                                                 N/A                 ACTCCCGGGCTGCGCAGAAACCC
complement(1045584..1046735)       PHAGE_Lactob_Lrm1: integrase; LC2W_1067; phage(gi195661224)                          2e-61               MAQISKTANGSWAFRASTGKDDIRRQVYKSGFKTRREATIAAAKIEEELDSGKIVSDPTFADYFDKWIEAYKIGRHSEVTDEWYTIVAGYIREYFKDTKLSVIDRTAYQAFLDWLGTNPRKRSEQPLSRSTVSRVNSYVRAVLKDAIEDGLTKHDFTRRAIISGKPAKDPSAKFLSVEEFKHVIEIADRHADLSHLSNYVVLIMAYTGARFEEAIGISWDRVNFKEQTITIDRSWQYKKRKQHDNFGGLKNAQSLRTVPIPSQLVLILKRLRKEQQENALKDGYRDSDNLVCRNDWHRVVTNETVNNTVKRLCGYAKTKNVITSHGLRHSHGSMLLFAGVDIMAISRRLGHASIQITMRVYLHEVDEMKQRDDKKIIDALSTI
complement(1046846..1047607)       hypothetical protein; LC2W_1068                                                      N/A                 MKKKQKRVKRPQGEINQRFDEQLSYLSYAADGYDTQDHSLIKMATAPLRTLFLKQNMGEPLIEQLKIDPEKTDFMSSVALGEGTVIYGGPVLAGWSKEKPPELPKPEYLPLCYNPSANILHPIPLKKWWNGRLLVFQDHIITRQDIVRYVANQDGGAHVDRTLIKEYDDLLRGMYSAKIVRDNLPKDIKNMHLALLRQLVDETMKSFQKLGLFPQNVTYDSGSNKYQQAYLLSDPMIAHILLVKRDHVIVQYY
1047626..1047856                   hypothetical protein; LC2W_1069                                                      N/A                 MTVKNSNIKIVSDSNDVWDLPETKFFYSAFSDTPNIGADELAALLSGKALVDLSDGEYIHWIQLTPDAIKTAKLRQ
complement(1048112..1048891)       PHAGE_Mycoba_Myrna: gp260; LC2W_1070; phage(gi203454821)                             6e-06               MATKKVNKVLIALHKYYTVLFAILALLSVALIVLDYMGRISIDKSPYTEIDNGILVIFAIDYFSRMLHADSKWDFFKHNLIDLLAIIPFNYAFSFFRFGRIFRLARLTRLMRLTRLARLAGIVGILTKHAERILKRTGLIYYIWLSAALILIGASVYSVTESVGYGDSLWWAIVTATTVGYGDISPHTVLGRIAAVILMFNGIGLISALTSAVTAYLSGTNSDSSQSPTDEIKKLYDLKQIGAITQSEYDAKKRQLLRL
complement(1048963..1049367)       PHAGE_Lactob_LF1: Lj965 prophage repressor-like protein; LC2W_1071; phage(gi418489418)     5e-16               MNEYLKAVLNWGFEQGVGYQLCYRLSPVTPSGSNPKSKTVVINMNWHDPAQLPYQAAHEIGHVLNQDSGSLYMFTPSKVRYEGEANKRAIDILVPIYFEDVYPEDANIQEFLDSFHIPEKMRDWATDSIRKYYA
complement(1049364..1049690)       PHAGE_Entero_phiFL3A: CI phage repressor protein; LC2W_1072; phage(gi281416216)      2e-23               MTPFDRLKLLADKQGLSINDVETKVGIGTNTLYSWKKKIPGGQNLSKVADFFHVSTDYLLGRTDDPSIADKPSKVDLADEDVIMTFEGQKIPPEDIELMKRLLRGKGK
1049947..1050159                   hypothetical protein; LC2W_1073                                                      N/A                 MSITQFERIKLQLDRNRRAGLKPGSQADLAEYLGVSKTYVHDILRGERLGQKGREYLEKALLYIGLKEAV
1050162..1050935                   PHAGE_Brocho_BL3: gp34; LC2W_1074; phage(gi327409426)                                3e-56               MNEPQPIEQNGQRVLTTEQLAELYGTTANVIKNNFANNKGKFISGKHYFLLEGQALKDFKDQVKDFDLVPYRTAHLYLWTRRGAARHSKMLGTDQAWDMFDSLEENYFNPKAQLNLQGLSPQTQFAIQAAQAMAEQERKLTQIDHKVDAISDIVSISTMDWRRATRDIITKIAHMRGDDYQATRKDIYKDVEQRGGYSLSTRLTNLRNRMAGEGQSLSKRNKTNKVDVIANDKRLIEIYMAVVKDHAIKYRVWDDEY
1050967..1051290                   PHAGE_Lactob_A2: hypothetical protein A2p30; LC2W_1075; phage(gi22296549)            4e-07               MPSFKVIEDESNYLVFTPEQFEAAVERARSYLEGQRWKVKDCIERLNGYRRSDFVNYVLIPKRDELERIGALLQWHDADHRDYLFKATTMSKWLDDNLDQITKGGWR
1051290..1051421                   hypothetical protein; LC2W_1076                                                      N/A                 MAAIIETLVTPTVPFWRYLILIAIGVIIGHCLAGKGNWKTWIS
1051426..1051569                   hypothetical protein; LC2W_1077                                                      N/A                 MSAVNISTNLDELEKLLSLATNQTKQLQETLKQISEYELVSKIESRE
complement(1051558..1051869)       PHAGE_Clostr_phiC2: hypothetical protein phiC2p84; LC2W_1078; phage(gi134287416)     7e-06               MKLNGFDDLQKRLSSIQKNAESLAGKRNVSFDVLFPDSFMTAHTKSPNIQSFLADLKVTDQQSFKDLPQKDLEQKVISETDFESWQDMMNTAGKKYYENHLFS
1051930..1052121                   PHAGE_Lactob_Lrm1: hypothetical protein Lrm1_gp31; LC2W_1079; phage(gi195661231)     3e-10               MTSAEHTIGDLLNEHNRLTLDVIRGEHSPIAQTLLKHNAEWRKRVYDLFVKADPHELHDPFLI
1052135..1052374                   hypothetical protein; LC2W_1080                                                      N/A                 MVLDYVIYVQAESIYKDLVSRRIAKASELALAAADNDSDAQGLGTEWLLLDELIKKIEEDEKKAADAATSTTNQKTKGK
1052379..1052873                   PHAGE_Lactob_Nu: hypothetical protein; LC2W_1081; phage(gi78000004)                  5e-30               MPPVYDLKSKYATLLAKAEDMEIDPIVLHDTLESIKDAIEDKAVGCVQVIKSLEADVDSIDQEIKRLQERKKSYQNNIARLKLSLVDAMNTTGQQKIKTPLWTIWVQKTASVNVMNDDPKKVQTDFVKVETVYKVDKQAALKKLKAGEKIVGLQLRYSESLRTK
1052885..1053115                   hypothetical protein; LC2W_1082                                                      N/A                 MSNRQPYQTHETASDKLIIQKQTRNKYFTMLNVTPETKEQIRQVSTETGVPMADVTTALVKFGIDHLVIINESPDD
1053115..1054482                   PHAGE_Strept_O1205: putative helicase; LC2W_1083; phage(gi23455858)                  4e-116              MTLRDYQQNTIDRIIRSMKSGHQSIIVQQPPRTGKTVIMAEIAKRTTDNGNHIMFMVHRKEIVDQVKRTFSRWGVNMNLATIGMVQTITRRLDKLEPPAVLFIDEAHHALAKSYMRIIERYPDAYKFLFTATPWRMNGDGFEAVADDLIQGQSVQWFIEHKYLAPVDYYAPADIDISKLKTKRTGEFDDASVEEALKPKIYGDAVKSYKKLASGKQAIAYTYNVASAKRLAQEFLVNGIRAESVDGTTPAEERDRIVAAYREGKIDVLTNAELFTEGIDLPNVDVVIMLRPTQSLSLYLQFAMRSMNPRPGKTAVIIDHVANVNRFGLPTDNRQWHLAGREDVETGTHRDPIKPVTVCPACFATFYRTGSTCPFCGATLAQENQLEVVEDAHLIKLETKRRLAVVHELMDNNVSMNVANKRPDQLKSMKELQAYAKLAGYKPGWAYIQGKNRGFI
1054484..1055224                   PHAGE_Strept_PH15: putative NTP-binding protein; LC2W_1084; phage(gi190151434)       3e-65               MSILPVNKPQTPVDTPRNFFIWGATMSGKSYLAERFPNPLFLNTDGNALANQAPSIQIRNIKSKQGLKQSAIKQLDEIILELENNNPGYETLVLDVIDDMIVMIEQAICVDNGVQTLGDIPYGKGYALFNQVLQELVMDLKSLSMNIVYISRIADLVDDDGKSYEAPSLKTKYYNVINGNSDLVIQTKRVGVRYIRRVTDRRKKYYRSQIDDPKILRILENVVGALEQDANNTVASKTVSNKTKEK
1055227..1055736                   PHAGE_Strept_PH15: hypothetical protein phiPH15_gp20; LC2W_1085; phage(gi190151435)     1e-08               MGLLENAKQALDGFDATKDKPTSYDLLPDGDYQVVLSNVDHFVTDGGYDGFRIQLEVLEGEHSGYKDSNMFNFDEVSSKGKAIPQSVIASHIKLVARLANAVGITLKDADWETIDTLVDAFLPAKGKVIILHFSSRENKKNPQYPYKNYDFDPTDQPATPELSDDDIPF
1055803..1056600                   PHAGE_Strept_5: hypothetical protein SpyM3_1341; LC2W_1086; phage(gi28876423)        4e-59               MDNLINYAVAYAEKGFYVLPMHRKKPMIEFADRPAMTADEIKRFWTTHPQAQIALRTVHHFVVDIDQHDDGADGFLSFNTFEHPEYFEDTLSQTTAGGGMQIFYLKPDGVEIPQIIGWLPGVDIKAHTNNYTMVAPSRTEKGQYKWDCKHSIVEASDGLIAELTKQKFTESRYQPEALSAPVKKSATAELFEQVVNGLGETGGRNNALAAFVGGLLFRDVSVDAVLALAKQANDNTPKSLDGKEFDRTFESMVKKEIRRREKIAY
1056605..1057840                   PHAGE_Lactoc_bIL312: helicase; LC2W_1087; phage(gi13095906)                          2e-88               MKKLQAMQSNVKPMPIAFSLNKDGYIRPNSIRNVVLALEHDPLMMKTFAYNEFTHEVDVIKAIPSLHISKGQMVDDYVSLSLDYLEGKYHVLFNDKVFNSALIKVSRDNAYNPVKEYMEKAFLAWDHESRVETFLPNYLGADQSDVTTTITKLFFVGAVAKVFQPTMKFDYVLDLVGGQGAGKTTLLKKMGGKFYTDQFTDFRDKDSYAIMLRALIVNDDEMTASNNSSFEDLKKFVSAEQLEFRSPYNRRPERRAKSFVLARTTNEYTYLKDKTGERRFLPVLADIDRQKYHPVTDMDKDIVQQLWGEFVGYYKAGFDFGMNRDEADQLDEHRENFMYVDAVEDEIDRNLSTWSSDFITSKELARLLGVDDLVGNRQLAKKIKYVMDNRRDWKPAQKRIDNVPTRGYKKK
1058115..1058429                   PHAGE_Lactob_A2: hypothetical protein A2p40; LC2W_1088; phage(gi22296559)            2e-38               MTAEAKIQNDIRVALSAHGCTIIRTNSGSVKTVDGRMFIAGPPKGWPDLTGFRHSDGRLILVEVKNETGRLRPDQKRFAEFIQRFPVIYGVCRSAEEAIKLIEE
1058436..1058720                   PHAGE_Staphy_vB_SepiS_phiIPLA5: hypothetical protein; LC2W_1089; phage(gi399528947)     2e-13               MMKTHNTLDDLNNHLFSEMERLNDDTLEGESLEQELRRVDGISKIATQIIGNARTILSAQVAYQNNESADPTMPRVLQMNEVTENGKALDGVRH
1058707..1059036                   hypothetical protein; LC2W_1090                                                      N/A                 MYDTEYWRRNALFTLEEEHRAKQIIPGRTWTEATKQINFEFEMNLTSRQIRNWGHRHHVYAAEIIDNSEPDVKIDPVREQRNKLLKVNQTLNRLNSGIKTRRVRGWRYV
1059029..1059616                   PHAGE_Bacill_phBC6A51: hypothetical protein BC1875; LC2W_1091; phage(gi31415769)     4e-19               MSRLLDDKQLETYKNFVPGHTAAEIANMVHENWGIQLTVQKVHALNIRNNIKSGLYQKYFGKADPRRSSSHHDLHKRMAIGTVKKNETRSKDRPNRAPIVVVKQSERKWKPNHRRIWEEAYGPIPQGYKTVFLDGNSLNFSITNLALVTDAEFLIMNEKHLISSDKQVTRSGIELARLLSKTHQIKRRKRKNERS
1059603..1059857                   hypothetical protein; LC2W_1092                                                      N/A                 MNAARRYPTPNDPYVNDKGPWGVKVGEMFVKWAMWGSLFPKLEMKKVVLVSKPKPLNNHDQAIYIARAIGGKVIRLTNYLEVDS
1059854..1060258                   PHAGE_Staphy_TEM123: mobile-element-associated regulatory protein; LC2W_1093; phage(gi388570351)     9e-14               MNQATYRHLQQVLRDYPHITQYVRDRREALMYAWHEQDENIGGGKTNGINSSDVLPIHLASDKRLWVLEQQKAAVERTIKKSPTLATGIVSELYFKDRPSLTVNGIALKFHVSVRSVQRLRRNFMETLADELGW
1060423..1060803                   PHAGE_Clostr_phiMMP04: HNH endonuclease; LC2W_1094; phage(gi414090491)               4e-15               MAMVPREISEPFYHSKEWKKTRAAYIASVGGLCERCLKRGIIKPGYIVHHKHYITADNINDPSITLNWDNLEYLCFDCHQEEHFEKTAAVRSDVMFDAHGQLVPVRLSPLRSHKKLFKKERHATHE
1060860..1061246                   hypothetical protein; LC2W_1095                                                      N/A                 MSLKMSIEKQDVAIQLEYERLRQTLSGISAEKLAAADNLIQRCAFMTITLQILEDEVKSKGPTILMHNGKQTMRVENPAQKSYNTMINRYTAAMDKLLSLLPRESAIMPADPNKESDGFDDFVEERGE
1061249..1062979                   PHAGE_Clostr_phiMMP04: terminase; LC2W_1096; phage(gi414090443)                      3e-126              MADIQIKIRVDRHVSYPPDYDPITQYWQSFVQNGGDQVVGKKIYRTYKKLIADMHNDNSEWYYSNRRGNHVLEFIENYCRHSKGPAGGKHIVLELWEKALLAASFGFVDGAGFRKYQRVVLIVGKKNGKSLLGSAVGLYMQIADGEAGPEVYAVATKKDQAKIIWNEAKRMVRKSPTLAKRIKTHVADLSSEEYNDGVFKPLSSDSDTLDGLNSSCILMDEIHQWKNGEPLYNIMADGITARDQPLIFITSTAGTIREDIYDQIYDDAEMTIAGYDQPEGYRDERSLFFIYELDKRAEWRDEKCWVKANPGLGTIKNKTTLAERVEKAKANHRLVKNLVCKDFNIRETATESWLTFDELNNEATFDTLKLKPRYGIAGADLSQTTDLTCATVIFQIPNDDHIYVKQMYWLPEDTLEQRAQEDNIPYATWRDQGLLRTSQGNKVYYRDIMDWFEELEQEYDIYLFKGGYDAWSATYFVKDLESRYGEKTFDAIPQGVKTLSSPMHSLGADLRSKRIVYNNNPILKWCLSNTTIVTDRNGNIQPDKGKNKRKRIDGMASLLDAYVVFENNQEEYQTLI
1062998..1064233                   PHAGE_Clostr_phiMMP04: phage portal protein; LC2W_1097; phage(gi414090444)           9e-115              MAFWNNLFHRKNSGVTVTPEYKLVTNYGNGFFGWNGKVYESDIIRSAIEVKATTIGKAVAKHIRSGAGDSIAVNPDVYIQFLLSDPNPLMSGQMLQEKMITQLELNNNAFAFVQNDANGMPTAIWPIVANSVEAIQDNQGNLYLKFYMPNAQTYIFPYSQVIHLRKDFNKDEIFGESNGPTLAPLMEIVTTTDQGIVSAIKNSAAVRWLLKFNTAMRPEDIEKNTKAFVASYLQTQKDQDSIGAAGVDAKTDATQLQPTDFVPNAKQMDATVDRIYSIFHTNKAIVQSSYTENQWISYYESQIEPVIRQMSEQWTSRLFNRRQRSFGNSIVFESSDLSYASMQTKLSLVQLVDRAVMTPNELRGFFNLSPVPDGDKMLLRKDTGTVPSATGSDGVPDPTEGGDDNDDSGTD
1064211..1064918                   PHAGE_Lactoc_bIL286: protease; LC2W_1098; phage(gi13095787)                          1e-45               MTTVVPIKGDIVTNDYGWLYDLFGDDYASPKSVSDLINKANGDDLSVEINSGGGIVDAGSEIYTMLRAYKGPVNVNVVGVAYSAASLIAMAGDVVAMSPAGMMMIHNVSGGQMGDYHDMENAADLLKKSNTAIANAYMAKTGLSQAEILDLMDSTYWLDPQTAIEKGFADKMMFDNAEKPGKMIMTASLNKIPSLATLNQMKHFRNTTALKRAPSDDDQMALLNAEYNLLNLKGE
1064923..1066152                   PHAGE_Clostr_phiMMP04: major capsid protein; LC2W_1099; phage(gi414090446)           2e-72               MNKEEYLKQREALMNDARTAIDKGKSEDANKAMKSVKDLDAKWDQQTKDQANLAALDDHAPITLAQVAPANDIVGVGKSLENTKLNTVAKTQPTYDKVWAKTLLGHTLNTAEQAVFDKENARLNGAPFSHQTGNTPTLIPNTVAAGIWKIAEEQYPAFADAKKFNVSGTLTINKHDGIVSGDAQWVDENTQADDEQNKFSQLVLKGYELNKVATVSWKMKSMSEEDFISFLTQELGDRLGVALGVAIHQGDGKNSPLGIETALKAEKGTPQVATYKDQIAYKDITSTMAKIHSSFAGKAAVYANSKTIWNQLANIVDGQGRPLFIASPINGGVGSILGLVVKPDAGVNDGDVLIADVTDTVVVNINQALTVATEDHVKGRSTDYGAYAIADAGLLTTKGAALLTAGPKV
1066226..1066474                   hypothetical protein; LC2W_1100                                                      N/A                 MADTPDRSAEFLKALQKGKVVAVGNKGTGEVDVTGLADGTVVKDGDYQVVFDTDNTKTLSSVASDPIDAPGVTVPTTPPSLG
1066488..1066814                   PHAGE_Bacill_phBC6A52: hypothetical protein BC2588; LC2W_1101; phage(gi31415853)     3e-10               MADEKSEEEPTLLDLLKQHIRLEDDMDPSMLQFYLDAADKYVQRKVGHSVKYLQLMVATVMNDNRSAGDDLAAALEALEPIFYLEVRTDDPDSQSNEPTQVDSHTVGT
1066753..1067091                   PHAGE_Bacill_phBC6A52: hypothetical protein BC2589; LC2W_1102; phage(gi31415854)     3e-10               MTQTVNLTNQLRWIATLLELKDGVDAHDRPKQTWEDKRVLYYADIGITSTEKYLAQQNKQDVVLRILIRRDMSITQGGNRVRIRGTDYKITRIYETPDNQRMELSLDYVDHI
1067075..1067404                   PHAGE_Bacill_phBC6A52: hypothetical protein BC2590; LC2W_1103; phage(gi31415855)     1e-11               MLITFDEFLARLKQLGAVYRDVAPRTAKYPYWIYTYTNTQRLVASTGTRLIVNEYQVSLYTKGVEDELLPFIKIFDDVPFQSFRGIPGDENDETITDLYTYIEVIAGGQ
1067394..1067777                   PHAGE_Bacill_phBC6A52: hypothetical protein BC2591; LC2W_1104; phage(gi31415856)     5e-11               MVNNNGFETMAKYLSGIKVDESVSKEGLVAAASQFADKLRPELPSEPNAPLAQTYGTLRDKLQVVDKGDHIQVTFGNAFWWLFLEHGTSPKNHQGIRAHNYVHNTFAANKNTIMQTMVKPVMDALKK
1067789..1068436                   PHAGE_Bacill_phBC6A52: hypothetical protein BC2592; LC2W_1105; phage(gi31415857)     6e-12               MSDKSSKANDIELELTIGDMFFAMKKQNETASTDPVFDTSVIRIPNIKKIAFKGNGKSNDIYASGKKFGTITQETSIEVTHTHIGMPIAVLDAMKGIAAKHGVEFGSTLAQSMPEFAIGFDTWLANGQHDGIWLTSCTLNPAVNETHATSEESFKEVNPDVVYNAGGLRNSSIYYSRYNSARDSADLTVDDFFKQVIFSPEQLETIAKEKAIPKV
1068513..1068878                   PHAGE_Bacill_phBC6A52: hypothetical protein BC2593; LC2W_1106; phage(gi31415858)     9e-21               MAKLSDLVRLRDNHFITIQGAKVPAAFTFASIDAIESAYGQGYKTFEKDLNLMLKRKVIHRDQKTMKLIWALVYGLLVGGGTETTFDEMNRAIPFSEIPSVIQEAMDILNEQNFQLSDIKK
1068959..1069120                   hypothetical protein; LC2W_1107                                                      N/A                 MGYSLQEFMKLTPNLWLKQYLIYIEINNPDGIYKEKPNPIRKQVTLDDIPFFN
1069140..1072310                   PHAGE_Bacill_phBC6A52: hypothetical protein BC2594; LC2W_1108; phage(gi31415859)     4e-119              MSDETQNVVLDFKMNGQVQFANTVKDINAVMNTAAKEYRAQISSMDDNASSTQKLAAEQQKLQIQSEAAAKRTQILSEQLKTMQDRGETSGSSFDRLVGKVADAQRVENNLKGALDQVNSQLSEQGSKANDAKDHISNLQQEEGELDSKLKLASSSAKLENAQLGDNASESQKTAAAQRQLSEQMDLSRQKVDNLKQQLKETVTAYGENSAEATQMKVKLNDAETSVANLGKQMDKLGKESQGTSSKLDEIAKNTAAERLQTVANGFQSAGQGLQDFNQKAQEAWTQTDDAVDNLTSKTGAVGGVADKLGESFEKVERSESGAQMESMDLSNTMAGLTSQFNLSGPQLEKTSEDVAKFSQITGQSGTDAVNALHDSMSRFNLSAKDIPSVLDAFAAASQRTGVPVADLEEDASKAYPAFKQLHISLQQGIPLLASWSKSGIDSSTVLKGMQKAFSAAKTENKSFSDVMTQSFKGIKDAKTDQDAFNIAIQTFGAKSGPQMAQAIRDGKVSLDGLKKSAQDTGGTVSKSFQQTLDPVDKAKQAQKEYEQTMGKIGGTIQETLLPVIKGLLPVVKGVSDAFNKAPAPVKALVVAFGAITVALGVMAPVITAVATVLPMLGVGATAAGTGAGLGAAGMGAFMATLLPIVGVIAAVIAAITAVVLVIKNWGAIVTWLKGVWSTVTSFFKQLWNGIKQIFTIAINAITNFLKPAFTAAANVIKSIWNGIKSFFSALWNGIKVIFTVAITAIAVIIGTYLNIWKTIITTVMNLIKGIITKVWNGIKSFFGPILSSIGNVIRSAWNAISSVTSSVFNRVKSVVSSIWNNIKNVVSNVVNAVKSVVSNAWNAVSSTTSNIFNSVKSAVSNVWNSIKSTISNVVGSIRNAVSSAWNAVSSVTSNVWDSIKNAISGPINTAKDIVRGAIDAIRGFFNFSINWPHIPMPHFSIQPSGWSVGDLLHGSIPHLGIDWYAQGGIMTQPTMFANNNGRAQVGGEAGPEGVIPLNDDTWNKMGAAIAAHMPSQGPITLQVDGRTFATITGPYTSDYLKQQDATQNFSYGRRL
1072317..1073012                   PHAGE_Bacill_phBC6A52: Gp13 protein; LC2W_1109; phage(gi31415860)                    2e-21               MVELILDGQSLAQSVPGTLVTKKPNIPAAKRDVQFTDVPGRLSGSLTEKRGWKDITWLPELQLVDFKTLNQSWRKTRQLLQSASKLVLSDDPDFYRLIKSVTIGEFSVDDVEVSGSYKPSFTLDPLEYQITDPKTFTANFDIVNPGNVAAEPLLTVSGSGTVKISVNTNQFSIDSLTAPVTLDCAKHTATMADKDITTSTAGDWPLFVPGVNHVILTGVTSITVQPRWCYV
1073009..1077412                   PHAGE_Bacill_phBC6A52: endopeptidase; LC2W_1110; phage(gi31415861)                   8e-67               MSTDIELYPRDQTDFSHHGYALDDISNDIVTWQLNAKFTLTFDYPMFSEHAGDLVAENIVRVPVPGGKAAFRIAQVIKSMGHLSITAYHVFWDLNDDFIADTNIVDKDGQGALDQIMRAANYPTGFKVLSTIGNVTNARLVRMSIINALMGTDDNTFLNRWGGEFDWQDFSFSVNPRLGKDRGVHFEYAHNLTGYEATKDSSGIITRLLPEGYNGLLLPELYVDSPKLGNYRKPKIGTKTYQDIKAIDETQATGDQEGAIPVQEAYELLRAAAAKEFSESHIDEAQWTYKLNVALLENTEEYKDLSITTTVLPGDTVTITHKLDGIDVRARLTGYTWQPSNHSYLTQTYDSTSRPDVAYSNLSSRVNEIKSQIELVDKVVIAKATNGMNSTGWGDQSPVDLNIAGKTGDVYYQTTAKGTIMWLFHDGQWNAETGDAFGTEVQKKVDTAIADVAAAKQAANDAVEKANSSAQLASMSNQTAQAAKSAADSANALATQAVSAASDAKTALATANSALETATDQKTTVATLVTKTDDLAGTIATLATKTDINKLSGEVTTAQTLAQQTADGLQLKADQSVVNTINGSVNQLRADLKVANDRLSLTMTKNDVTGLLTPYATQSWTQGQITATASQFNAQFSSISGKIDALKFGNRNLLLNTSNMINLAHWTRMSWSSATTILNLSTHQFYHNGRDNLIKLTTTDSLDGHLRSDVVAVKPDTDYNFQFLGFQNYNVKSITVYFLGRTDATSPGDAGDNYDSDKIHLLMNAITLSISGTKRETATFHTNHGETLGYIRVDMNGGYKATDPADMYMVEAELAEGPTVPVYSPAPEDSADYADAKVASLKVTVDGIQSTVANYQGQTTTALQTLQGFQTTATDRINGLKLQQTQLASQWTSVVSGFSNPNLILNSMYPEDVSKLGWIDTGYLNITSHAFYAGGGQTLFSINSTDARERTVSTNRFKVTRNTAYTVSLKAFANWNTVGLDIFVMMRRRGSAKDYDTFQLLINNQKLSPSETLSYSAIFNSGDYDEAFIRIDNNGMVDTSGDAAYLFFAEPKVELGSMATPDVQSGTDSQITQLQDAINLRVSKNDVLSQINLEANRTLIQSGKLVLDAPTVVFTGNAFIPSAAIASLSADKITTGTLNAANLNVINLNASAIVTGTISGANLAINLNTGMVEFQKGRIHSTDNNIDINVDQKYISVTDSNNSVLLKGGSMTFTQPYAFDTDQTPYLTIDNVGSSQTLGRGAEIVGRDVLTVSVSGENNSFLSGVPLFQKDFSGISISKNYDTVVGGANRGVRIIGGGLYSTGLGMSTVPSIMVGYNQNGLTGGTRINIEADYVHIPSAWSKTTSSSPNAFVASDGALVRSTSASKYKVNIERTRSTDLAERLLTVPNAHWLDKAAMERYASGEQKELPQTNFGLIAEDLEAAGLEDLVVRGPDGELEGIQYDRIAAALLPLLAQMKTEIDELKATA
1077441..1077866                   PHAGE_Lactob_LP65: hypothetical protein LP65_gp096; LC2W_1111; phage(gi56693144)     5e-10               MKITLENANIANVYRLVEQIKVKGRDALALAKFIKLLKQTLKSAGEDEQALVAQYALKDENGESKTDSNGNIQLNPDLAREYNKVHGEWLEQKAEIEGGTYVNHIDDVQRIISDYVDENEIGGPDLDAYLALYEAFEKGEK
1077869..1078138                   PHAGE_Lactoc_bIL285: Orf59; LC2W_1112; phage(gi13095739)                             9e-13               MTLKTNKSISLTGTSTIGDVQVAYLNATIDQEGNGANTVNQSIQNQALYDANKKEVRADIAKFQQLLYDTEDSLVSEKEGTDSSKTPGL
1078186..1078572                   PHAGE_Lactob_Nu: putative holin; LC2W_1113; phage(gi77999998)                        2e-66               MLNKIRDHPTHTALAIGMVAIGLFLLINDHYFVWPPHYSDWLNDDIVGFLFVIDGLGIGGWVLWGTQLAVTNRLLLTTTSFLMSFLTILQLLTSISTGIYSSWISNAIITAFVLILARRSDSRDSSDN
1078756..1079217                   PHAGE_Lactob_Nu: putative holin; LC2W_1114; phage(gi78000034)                        3e-69               MNNLTELLVSLAVAAIPIIGAWISKQVLANKQALTLVKVLGPLANAAVTAAEHLGMTQAIDGAVKKSTAIQAVKDGLKSLGFTSTDEQTIANAVEKAYADLKDSLAETYPQKTVDQEVSNQDKVAAAAQAAADAVKAQLAPESVAPVASEEAK
1079219..1080271                   PHAGE_Lactob_A2: lysin; LC2W_1115; phage(gi22296540)                                 0.0                 MSYTINKEFALGANEGSSQVANRLYIILHDVGAESGARANAAYFKNNIAAEIAYTAFVVGDGGQVYQVGEPGYVQWGAGTVANANSPVQIELGHTSDPETFKKDYAVYIELARDMAARYGIPTSLDAGGAGTPGIKSHLWVTQHIWGDHTDPYGYLARWGITKEKLAADLANGTTTVDASKSALAAQSARPQAIVTRNVNVAYGLHLLGIRWLDEVTNFGSGDNGFAGMPNYQHDLLYIKVDHGSVKYRVHTVQSGWLPWVAKGDRNDTVNGCAGNAGEVIDGVQIIFLTPAGESYKQAYYRSQTTQRAGWLGVVCDDGTSLPQYTDTYAGLFGEPLDRLQIGISSINPF
1080407..1080429                   attR                                                                                 N/A                 ACTCCCGGGCTGCGCAGAAACCC

#### region 4 ####
1342923..1342934                   attL                                                                                 N/A                 GATTAGAAACCG
1356669..1357277                   PROPHAGE_Pseudo_KT2440: ISPpu13, transposase Orf2; LC2W_1415; phage(gi26989833)      8e-08               MDAAMTVKDDEHAELIALRAKVAELEQQIAYFQKQLFGRKSEQTLDSNQMSLFIGEFEAAQAALKATNEAQAKKTQVKGYDRKRKNAKEKLRPDLEVVKAVIDLTPEENACDSGWQLVSVGQHFVRTAVEFVPAKMVRREYFIKFIRKSELTVAATRSLCNRMFPMPSSLVAWRPHHFWPKSFMINMNLMCHFIDRSRISSD
1357145..1357591                   PROPHAGE_Pseudo_KT2440: ISPpu13, transposase Orf2; LC2W_1416; phage(gi26989833)      5e-17               MQSHVPNAVITRSMATASLLAKIIHDKYELDVPLYRQIKDLQRLGLDVGETTLCHWTINSAEVLAPLYDLMHNALIHQPLLQGDETPTQVLKEPGRKATSKSYMWAARTVRSCATPVDLQPESRRSGRQGFIQWFYRRPAMRRLLWLQ
1357593..1357946                   Integron integrase; LC2W_1417                                                        N/A                 MKGVKRVGYWAHVRRKFYEASHISNTLKACEPLKLLDYMFFLENKWHKLAPKARRRLRHSKMKRLLKQFWRWCDTSDALPKSGFGKAIKYAQDQRPYLNAIRQYSPSTAVITQPSAT
complement(1357855..1358028)       hypothetical protein; LC2W_1418                                                      N/A                 MVIKIALIFAPSGTPLNKKFLRPMTQLFMLRSVALLLQSMANIAGWRLSMVVDPEHT
1357958..1358149                   PROPHAGE_Pseudo_KT2440: ISPpu13, transposase Orf2; LC2W_1419; phage(gi26989833)      4e-06               MGRKNFLFSGVPEGAKINAILMTMIETAKANALDPMTYIGSLLDELAQFPEWRKSSDLGDYLP
complement(1358456..1359067)       30S ribosomal protein S4; LC2W_1420                                                  N/A                 MSRYTGPRWKQSRRLGLSLSGTGKELARRPYAPGDHGANNRRKISEYGQQLREKQKLRWMYGLNERQFQNLFLRAGKIKEGTHGDNFMILLETRLDNLVFRLGLASSRPQARQLVNHGHITVDGKRVDIPSYEVEPGQVIALRERSQNLAIVNEAIENTVSRPAYVTFDDTKKTGSLVRLPERGELEPEVDESLVVEYYNQKL
complement(1359243..1359725)       hypothetical protein; LC2W_1421                                                      N/A                 MTTLDPIIVDQLDGLLTGETNPITVLANASALLNDLMTDLNWAGFYLYNDKTGQLDLGPFQGKVACMHIQPGNGVVGTSYAQNAVLRVPNVHEFTGHIACDSASNAEIVVPITVDNRVVAIMDIDSPTLDRFSENDEAILTKFGETLAAHLDTAALNTVY
1359902..1361605                   PHAGE_Staphy_S24_1: structure protein putative minor tail protein; LC2W_1422; phage(gi371671333)     3e-05               MIWFFVIVVIIVVAAGGVWWLQHYFQTRIKNLDAQVEAIDVGALSSQIRSIEQLKLTGDSLATFSKWERAFDQLNDDDLADLQKILLDLEDQAKRFRFDHAQKIAKVLEAKIDTARQQYDLISQALQDIRHDEADNRSKMLQLRDDYQVSRKTILAKSFVFGDAQPALEQQLQQLAELFQKIDQINNDGDHQAAKSEIKQLSDEMAALRRQVKELPPLVNEQVNEFPAQINEIEHGYRQLTTAHYVFTDDIPGMVEDVNEKMADANTALKSLDVDATEAANSEIEAEIDKMYAIMEKEMQARKRVDAAAPDLRQFIDHALRQNRELQTELDHLNQSYTLNHNEIKIAKDLKTQLDSIDANYIKDTDAIEAGKAVYSDVIERFDATKDELTAIEKQQVQINQAVAGLKKGEIVANKQAENFELDMRNIKHEILRHHLPGLPQDYVSQVKHVTAEIEQLNHDLDQVKINMDAIAKFLIKIASDIDALKKATSALIDAAGLTEELMQYANRYKTTVKPVAEAVHQATESYMQFDYKQAADTLATALEQTEAGSYKKVEDAYLARKKASLY
1361914..1363071                   PHAGE_Africa_virus: NifS-like protein; LC2W_1423; phage(gi9628230)                   2e-06               MIYFDNSATTKISPEALATYNKVSTDFFGNPSSLHALGTRANEVLQSSRAQIAQLIGAKPNEIYFTSGGTESDNWVIKGTAMAKREFGRHLITTSIEHPAVINTMKQLEKLGFDVTYLPVDHRGFINIDDLKAAIRKDTILVSIMAVNNEIGSMQPIVEAARVLDAYPNIHFHVDAVQAVGKGLDAALQDPRIDFMSFSGHKFHAPRGTGFIYAKEGRMIAPLLTGGGQENDWRSGTENVPAIAAMAKSLRLLLANEADNVARQQAVRKRIYDHVSQKPKVTMFSQLTPDFAPHVLCFAIAGVRGETIVHAFEAQAIYISTTSACSSKKGTESSTLAAMHTDSRIATSAIRVSLDEANTLAEADAFNKAFDTIYAKFAKLDKATV
1376089..1376100                   attR                                                                                 N/A                 GATTAGAAACCG

#### region 5 ####
2018902..2018913                   attL                                                                                 N/A                 GATAAGCGACCC
2019282..2019611                   PHAGE_Salmon_1: putative transcriptional regulator (repressor); LC2W_2080; phage(gi169257171)     9e-06               MSLQEKIAHRIHDLRLSKSMTQEQLAEKANMDVSMLARIERGSRGDIRISTLERIVKGLDVSLQEFFTFGDDQDEVMMLAASVTLIKDPEMIRALQKIVDAALGKNMKR
2019988..2020632                   hypothetical protein; LC2W_2081                                                      N/A                 MQKSFIAVWTLFLGLGLVGCGHQQQASPSSSSKKTSQQTSSRQASQSSSHSSKIASSSSDASHSTTKQPLWSNAKSAKLATFMASWSKTMGQQYESYWQGHSVDMYGLKIPDELGQAGTNQPGSMAMAVGDKAVTWALSTSGESNAEYTIVVIYSDAAHEPYLGKHVYLFTLHNGQPEVLVTQQNQGNDNNWLYFSETQNQELRLGFAKIVQGD
complement(2020763..2020939)       hypothetical protein; LC2W_2082                                                      N/A                 MILAATYPVAAIFMTNKGNFDIMVWYSKDGQCRIVLRHLLITSLAFGFDANKHSMDTE
2020826..2021611                   PROPHAGE_Staphy_N315: transposase; LC2W_2083; phage(gi15927655)                      1e-27               MSQYDPTLSVLGIPDHNIKVAFVRHEYRGNGVRRRQYHVIDAELTYRLTRCPLCGFEALHPNGFYTAHVRVLNGVEMPTVIDLHKQRWRCHNCYHTVSAKTPLVQPDHTIAAHMTERIMKLAHERLPVKTIARIIGISASSVQRIIDQNLKLRPARRLPTRLCFDELRSTHGMMSFICLDADSHRLIALLGDRFNRTIKNFFIAHYSLADRTRVQMVTMDMGAAYQTIIHEVFPKAQVVIDRFHIIQLAARALTRPSAQTA
2021577..2022062                   PROPHAGE_Staphy_N315: transposase; LC2W_2084; phage(gi15927655)                      9e-08               MPSRVQALKQLDDKHSRPYKIMKTNWRLFHQTAPDAKHKQFLFGLNEYVTQQEAIDIALDTEPKFKQTYETYLALHDALMVRKHPAELANLLATYEPNGTAMDMTIATLKRHKVAVLAAVNSPYSNGPIEGVNRLIKSLKRSCFGFKNQLNFFKRIYQITA
complement(2022182..2022826)       hypothetical protein; LC2W_2085                                                      N/A                 MKVKNIEILQDKIDREMFWRREEIIRLNIRANQPSENATILRAGYLLLYSSWEGFIRSIANLYVVFVFSRDISLHDLRDGFQAVYFQQSFSKVNNLPTSAQLQEFIREVHSKELERPKRKFVDTTGKRFINTDSNLNFQRLARIVSVLDLPLDFSLKKEWIDRDLLKVRNEIAHGERSDVDVEMFNETVSHVLEMMDLFSEGIMTAAEKKLYRR
complement(2022807..2023097)       hypothetical protein; LC2W_2086                                                      N/A                 MKFKEASLILASLFGENAFQKWGESKQKYYGPCLRSIFEVLFPLVANNLELLVSIQKEISNRKEYKEATKRGARAIVRFSKLLKLSEIIANESKKH
complement(2023129..2023434)       PHAGE_Spirop_R8A2B: putative transposase; LC2W_2087; phage(gi9626114)                1e-08               MGAFGPQVKSITVDHGKEFANYQALEQDYQIKVYFCHPYSPWERGSNEYFNRRLRWFFPKKTNFSQVTTDEILAALELINQRPLKIHHQQTAIERFRACSD
2023844..2024314                   PROPHAGE_Xantho_33913: IS1480 transposase; LC2W_2088; phage(gi21231089)              4e-48               MIVDAQSVKTTDLTKNSGYDGGKKISGIKRHMAVDINGLPQAILVTRANVSDRSGALAMFSLASQNLELVQHVMVDGGYTGNDFADQVKLILNAKTTVAKRNELHTFTVLPQRWIIERSWSWLDKCRRLWKNCERALNSSLQMVVLAFLKIVLKRY
complement(2024301..2024909)       PHAGE_Spirop_R8A2B: putative transposase; LC2W_2089; phage(gi9626114)                1e-06               MGTSTLSRFQRGALAQLVNEGNKSYQVMADALGVAKATISYELDRVKPYDPELAQQDADRKRRNCGRRSMLTAALATLITNHLRLTWSPETIAAAYNLSTASIYNWLNRGWLPFKLTDLPNRNVRQHRVSENRGKFTSGTSIEQRPTTVNQRLAFGHWEVDTVLSSRSESRSCLVTFVERKTRLLWAIKAPNRTAKNLSSIF
complement(2025012..2025533)       hypothetical protein; LC2W_2090                                                      N/A                 MGNIIDDVMGHITPIDKKEVDEFKLLVSEEAFLTENRDKITFSEGFPPELAGAISGLGAGAVGVGVVFAVFAGMSGAEIMAALAGFSVAGAVGGIASIAAVVAAPIVIVGGGVFHVANQNKLGHELERLFKESIKFEKQLANDERENVKGLILATNEYRKKLANKHHDLKKYL
2025706..2025987                   PROPHAGE_Xantho_33913: ISxac3 transposase; LC2W_2091; phage(gi21231087)              8e-09               MTYSRNRYDQDFKKNAVRLSFNSSKPVKIIASELGVPESALYRWRKLYTEDGKQTPFASLEAENRALKRENAELALERDMLKKAAAYFASLQK
2026053..2026823                   PHAGE_Lactob_phiAT3: putative transposase B; LC2W_2092; phage(gi48697274)            3e-26               MLDVSTSGYYAWRRALPKRNTKEGQYRQRIKHFFDQGQGTYGPKRICGLLRKNGNKASYHRVARLMADAGLYSTLRCRHPKSLTDSRLARQGDYPNLVKHQSFKPFEALSSDITQTTTSEGKAYICQIRDLTSNLVLAHQISNHMDTDLVLATLKQAHQRWALPETCIFHSDRGSQYTAKAVTKLVNQYHWQRSFSALGKPGDNAWSESFFAIMKKELIYQIQFKDINDLRAQVFAYIETFYNRVRSCLVSLILTQ
2026859..2027158                   Transposase; LC2W_2093                                                               N/A                 MQHFSHHYQSDISRQQFDLIRQDLEASRKRTHPKHIDPYDIFCAMLYVLKNGCTWRDLPADYPKWSTVYYYWMSWSKAPTPDKPALLTQVLKKLSLIDD
2027392..2027613                   Transposase IS4 family protein; LC2W_2094                                            N/A                 MVRTMMVDSGYTGQNFANEISSLTSAKVIVVKEMSYTNFRLSPNGGSLNVHLVGWEIIIVYGVTVSVSSTLVS
2027677..2027925                   Natural resistance-associated macrophage protein; LC2W_2095                          N/A                 MIFAIYYHGNEAKIEGLLTASQVFLSIALPFAIIPLVMFTSNKKLMGEFANHTWVKYAAWFATIVLVTLNIYLILQTVGLLK
2028082..2028990                   PHAGE_Lactob_1: Mg2+/Co2+ transport protein CorA; LC2W_2096; phage(gi226377699)      7e-05               MIKPEKTINGTKWIETIQINAEERATLEDQYGIDEDIIEYVTDNDESTNYVYDINEDDQLFIFLAPYALDKDALRYITQPFGMLLHKGVLFTFNQSHIPEVNTALYLALDNPEVKSVDAFILETLFTVVDSFIPISRGITKKRNYLDKMLNRKTKNSDLVSLSYLQQTLTFLSSAVQTNLSELDRLPKTHFGVGADQDKIDLFEDVQIEGEQVQRMFEIETQVVDRIDHTFNSLANNNLNDTMKFLTIWSLTMAVPTIITGFYGMNVKLPLAGMQYAWMLTLGISVALIVAMLIMLKVWRKM
complement(2029274..2030203)       PHAGE_Spirop_R8A2B: putative transposase; LC2W_2097; phage(gi9626114)                5e-21               MSSITYSERIKIETFCELGLSNIQMSVRLNRSPSTISYELSRCQPYQAELAQTDAEYKRSRCGRKTKLSDELKQKILNHLRLSWSPGMIAHEFKLATKSIYNWLNQGRIGFSLNDLPEHGVRQRRNVDQRSKYNQSLGRSIEQRPMMINQRNRIGDFELDTVVGPRGHSKAVLLTLIDRKSRFLWAYRLKDRTTATVNEALTKFLTTFNGPVHSFTVDRGTEFSGLVSLESQYGIKTYYCHAYTPAERGSNERFNRNLRYFYPKGTRFEHISAQDLTTTLLQINQRPLKILDWQTPYQVMLTNLSKNSD
complement(2030317..2031213)       Proline-specific peptidase; LC2W_2098                                                N/A                 MVIATTKILTLANGYHLWSQKQGKGTTQLLCLHGGPGSDHEIFEEFGNHLADQDISVYMYDQLGSWYSDMPDFSVSKNRNKFFKIDYYVDEIEEVRQLLGLDNFFLLGHSWGGILAQEYALKYGDSKGFRGLIISDMTDDIASYERNIAHERKELLGSEEVMFMRQCESKGEYTNNRYHQDVLKLDYTYIIKHPEHSSKHLIGTKNRALYEYFQGANEFVVTGALSGWTVADRLYQIKQPTAIIFGSDDTMDKDEGQKMSKRLPNGEFHIINNAGHCSMLDNPKEYFSVLTKFVKRNS
complement(2031217..2032074)       D-aminopeptidase DppA; LC2W_2099                                                     N/A                 MLKIYISTDIEGLAGIVDFSQEDEDREIFRDLYNQQIEWVLQGIQQSNRNDEVTDILIADSHAKGLNLSYNRLSDCDERVSLISGWPREDYMMSKLDSTFDQVFFVGYHSGIGKEHGNMDHGYSARSAYKIWINGEYQNETTINAAYASEVGVPVTLIIGDSGLHQQLRDEKMFPAPFFVETKQSLARYAALSYPRKQIRENTYQAVKQALEDPVPNPQKSYKMPATLRMQVCNTAQADAIEQMPNVKRIDGRTIETSMPDMKTLMNGILAMVAIGGTQGRFKGA
complement(2032074..2033159)       Cellulase; LC2W_2100                                                                 N/A                 MEDTKQIQLIKDFSDAHGVPGQEQEVVALYKDRMKGLGTTTIDGMFNALTALNGNTGKKPVIQLDAHSDSCGFLVQAIRPNGLIKFVPLGGWVPTNIPAMRVVIRNKLGEYVSGVVATKPPHFMTEEERHAVPKIADMSIDVGTTSRDETINDFHIDTNCPIFPDVKCEYHPQNGFFFGKDFDNRVGAAALIEVFDQLQNADLNVDVVASLSAQEEVGLRGAYVTARKINPDISIVFEGCPADDTFEPEWLSQTHIKGGPMLRDMDTSFIANPAFEQYAADTADQNKIPYTRAVRTGGGVDGAAIAYWKGIPTIVVGIPVRYEHTAYNWTTLIDFQRSTRLVATLIQQLDEQQINQFTEVN
complement(2033188..2034807)       Lipoprotein, peptide binding protein OppA-like protein; LC2W_2101                    N/A                 MIKKTKLPGLVTVMCSATLLLAACGKQSAPETHDSINIGESAALSTADNSQAMDNTSSDVMEQVGEGLYDFTAKGTLKEALATNMPKATNGGKTYTFNLRRDAKWSNGDPVTAQDFVYSWRRTVDPKTKSPQAYYFDGVKNYSEITARKKSPNTLGIQAVGKYKLVVTLDHAMPYFPSVLAVNASFPLNQKYVEKEGKKYGTDSSHTLYNGAYTLTNWNGSSDSWTYSKNKYYWNKKKVKIKTVNVTVMKSQTTAGLEFKSGKLDLTPISGDEVKNEKNNKSLFVRKIPGTMYLQYNTKQKLFSNEKIRQALTYATNSKELASDVLQDNSSTATGYVPTGFTNSKTGQDFAKQAGVIVKFDKTKAKQLWQEGLKELGMTKASFTLMSSDDDSTKKVDEYLQGQYEKALPNLTINIKAVPFNSRLSASESGDFDAVLGGWTPVYADPTDFLNLFVTGNSNNFGSYTNAQYDKDIHDANVTNAQNVSKRWSNLQDANKIVTKTAAMTPLYFLSENYLISSHLEGLMMGPLGQPYFKDVYWK
complement(2035079..2035762)       PROPHAGE_Brucel_1330: transposase, putative; LC2W_2102; phage(gi23502708)            2e-44               MNHFKGRHFQKDIILVAVGYYFRFSLSYRDIVELLRDRGITVHHTTVMRWVHHYGPIFKALWRRHQTAHAKSWRIDETYIRVKGRWAYLYRAIDSNGLTMDFELRKHRDYTASYHFLKRLLTTNGRPDRLVTDQYRATLKAVKHLIKQDYLSKSAHQCSKYRNNLIEQDHRFIKRHRVRSASFQSIRTASATLSGVEIVHAIRKRTRRELSLIGFSVVDELEALLAA
2035822..2036022                   Restriction modification system DNA specificity domain protein; LC2W_2103            N/A                 MHQNRLKVFGINYDKVQKYFSIFPDEKEQKYIEQLLFLTDHLIAANQRKLEKLKELKKGYLQKMFC
2036840..2037049                   hypothetical protein; LC2W_2104                                                      N/A                 MTVFYLPLLVAIIHVGVALPFVQRLLRVFGLTNWYFFLNVSLITLAILALVYVLVYKLTRNIYYRVVSE
complement(2037109..2037228)       hypothetical protein; LC2W_2105                                                      N/A                 MKAISKYFFDELPELPDGELLHEKNRPVAVNAYRSILNQ
2037292..2037690                   hypothetical protein; LC2W_2106                                                      N/A                 MSSEQEVTRMFICYVQQALKNERINRYKASLRQIKEIPLEAWILEEIEDSYHLDEFRLTDEEIEHLEDFIESEKLSRAVSTLSSTDKTVLYQYYYGELNDVEIGNRSGKTSQGINYRRQRALKRIRVAYTNL
2037711..2037962                   hypothetical protein; LC2W_2107                                                      N/A                 MHYSEIDNLVPVILAVQEDDNNAITLLLELFGRVIDYEARYGHRHIDPDLRQELQIKLIYIAKCFDVEKHLAMSSKKIGQKKT
2038318..2038566                   hypothetical protein; LC2W_2108                                                      N/A                 MVHVITMTKHELVALGYGASRAQDIIRRAKLLMVRKGVPYYKSPKLGRVPVTAVEEILGLQISTRTLAELAKTMHSEATKEK
2038570..2039763                   PHAGE_Bacill_phIS3501: phage integrase; LC2W_2109; phage(gi422934298)                2e-44               MATTKDPIKTRKNGTFYFRAYLGVDPKTGEKIQKQVGGFTTRRDARKAYKEMVGGSVEKVVAERDQQHIQFKQFWEEFFLPWYKNQVKPQTYDSRRSSLKHFKMFEHMYMDKIKPVDIQKWQNQMTCQVSKSYTRLVQCMLSRVFQRAIVLGFMNENPTKTVGNVKKVKNQVDFWTKEEFEAVIKTFYIEDFYQHFCFFTLWFLFMTGMRIGEATALQWDDIDFEEGTVRINKTLWLRSYTNYSFSTPKTKASNRTIPLDAKTLELLSDWKKAQALKCKTDFVLSFNGVPTRRDLVMRIIKRHAALAGVHRIRVHALRHSHASLLISLGENPLVIKERLGHEDIQTTLGTYGHLYPNMNFEAAKRLNGLVEISTAKSDVAQVQNNGVTAGLAPEVAR
2047178..2047189                   attR                                                                                 N/A                 GATAAGCGACCC

#### region 6 ####
2991437..2991449                   attL                                                                                 N/A                 CCGTGGTTTTCTC
complement(2991464..2992333)       PROPHAGE_Oceano_HTE831: integrase; LC2W_3082; phage(gi23097608)                      6e-38               MFNNHILPAFGGKRIATITTKDVQKAVKRWFEFTSANYKRWYNYVSSVMDYAVRQGYMDKNPAKAVVLPHHDDLAGDKPENFWTKEQMNHFFACIDQANHFDIFIMFRVLAFTGVRRGELLALTWNDVSFKENSIKVNKTLTQGDKGHQIVQAPKTRAGRRTIPVDGQTMAYLKRWRRIQQETFIQLGINTMQPNQLLFTNTKNGYQSLNTPSKRLHKLQDDNGLTPRITIHGFRHSFISNLLIAGVPVTSVQKLVGHTDPTITLGVYAHVSAKQESEATAALAKYMQN
complement(2992363..2992620)       PROPHAGE_Oceano_HTE831: integrase; LC2W_3083; phage(gi23097608)                      7e-10               MASIKKYATKDGKEFWRVQVFAGNDPQTGHKKYKVRRGFKTKKEATVAAARLELAISNGDLEKEKPKPVFFRMYMRSGMETTLIR
complement(2992733..2993371)       PHAGE_Lactob_phiadh: hypothetical protein phiadhp25; LC2W_3084; phage(gi9633025)     3e-10               MTNNRIKAAREAAHLSQGDLAAQLKVTRQTISAYERGLREPRMDVWKSLSDALSVSIPYLQGISSDPIAIDETIAHTMTNRELKEIIDDYKHGNKTPEDAEKVLSAIKKSMSTTESLNQMRLRAMNQLVNSIENLDLEKMDTFEMLTINDAIHLCTAFYNGFHSDRGLSASFGALLSGLRSIVKNDGQVDYVKSEFMSSFEQLLDAVTAKHA
2993539..2993814                   hypothetical protein; LC2W_3085                                                      N/A                 MQLQISTTPEFENKLRSLVRQTVAEMMPQQQTIQPQIPEFLNLGEACKLLSVSRGTLDKLIKRGEIKVTHVNTAKRISKKQLIEFMASREV
2993882..2994103                   hypothetical protein; LC2W_3086                                                      N/A                 MNLFSKDEIALDHELGNLIDDIQLNVHGIAEDSTVTVDGKYIPNSELAVTTAKELLRVSEILKLYENEDYADD
2994214..2994405                   hypothetical protein; LC2W_3087                                                      N/A                 MAKMINSKYGWTWSQFVKADADCDRYWAAKKAEKRSLIEATKKSPRVAPQGEKKTSEKIQINF
2994452..2994742                   hypothetical protein; LC2W_3088                                                      N/A                 MKNVSTTVNKPLDLCDSLYDLRKAKGALSALCDELDEFGISVCHFDKNHSHDNAKLVALEALRDFDTWECLVFCARDIITDQINAIDSPETDEEEK
2994739..2994927                   Conserved protein; LC2W_3089                                                         N/A                 MMKEDYYTTAQALLSDTSAMVNILRHQINDEQQSALADTVADMIIDARRLLLEGDAADGRRA
2994911..2995723                   PHAGE_Lactoc_bIL310: hypothetical protein bIL310p24; LC2W_3090; phage(gi13095885)     5e-25               MVDVLKVALGYQQHGFAVYPLAPETRTPLAGSHGYKDATKDPEQAKKWWGEHPNYNIGLGLDGVLVFDIDMGHKSGANGNETLAKLCADGRAGQIPSTYIETTPNGGLHIFFTYPKELKLTSRSDLFSKNGEKTGLDYVATGVPVFPSIRENGMYQPLKGHKITKLAPAPQWLLDEIQRQCHPNMSNYYSSADSWFGHFINRLVDGTDEGNRNQWMASIAGSVFRSGADPDNCADLIQTVNQRYVRPPLPNGELVKIINSISKREIARRS
2995736..2997322                   PHAGE_Entero_EFRM31: DNA primase; LC2W_3091; phage(gi327198106)                      6e-34               MDSLKEELNKSPEFTQLKVVSKSTLEPFDVNKYPDPPDKTEKGIRAYNKELAKKLPSWLKVWFQSEQKDENDPKSVIIHRHIKVDFLAYGYHFMNKTRVESFPALSEGAIYEPSKGTWRTFGKGEFTKTTESRTTKEMLKWGLYRESDITGARRFLQRISYNEDYGKRSPFDENPHPELVAFTNGTYSILTNKMQESSADNYMLNAHEYAVDPDRDDCPETERLLAAMMGDAAITFEEFIGYMFYRSYRPFQAFLWLYGTGGEGKSTLIRRITNLIGRDNVSASKPADLANGDRRFETANLYGKEANIVADVGSDYLKSTAAIKSLTGGDYIAAEFKGIQNFKFMNYAKLLFSANEMPAFSDHSSGFADRVTVIKMINGDTRHTHWWDQFDDAKMDEETPRFAMKCMHMFAKALKSGGLTKPDSVVNASQEWLDANDHFKEFLDQYAEINLNEDRGEVSTVVTAEYKRFCQDNNYMDKTTTQAITKKLDAYGVKKVNSRRGFDNDTFGNTRRYIGLRLTGSLINPRFN
2997648..2997983                   PHAGE_Lactob_phiAT3: putative head-tail joining protein; LC2W_3092; phage(gi48697266)     6e-18               MKNYSIARLNKVAEIGKTVSRRTGAGINISTFTPTGTLFYGSYNRTMTQTYQITGTDLADTIAIVIRHTDAIDDSTQVKLNGTLYAIQSIAYDDDPNAFDVVTLKKTTKGA
2997988..2998173                   hypothetical protein; LC2W_3093                                                      N/A                 MKLFEYTAYQGELNGIIDKFMMLHRWQVGFIRVFSAPDNMITVQLYYRDDKPEPEKAGVLA
2998709..2999179                   PHAGE_Staphy_phiPV83: phi PVL ORF 1 homologue; LC2W_3094; phage(gi9635714)           3e-17               MGAPLKSITQMRGAMSKKKLADRRDMEESLFTYQELVDQPPTWLDEYAVTEWQRIVPLLKKDIPVSELDAALIASHCQAYSDIQKAAELIQEQGMMVDTADSVKANPAVKMKLDATNQMIRIDDLLGLSVYSRAKLAVKNETKKKPDDPFADLMSS
2999176..3000879                   PHAGE_Lactob_LF1: bacteriophage terminase large subunit; LC2W_3095; phage(gi418489385)     9e-117              MNYATEYTDKVLSGEIVACKKIKQAARRYRRDLKASKRKKNPWPYYFDEDFANKAIEFIELMPARDGSPLKLELFQKWFISELFGWRDKATGNRRYDRAYISMARKNGKSFLMADLGALYLLMENKPAMNREIVYTANSNAQAHLAFDMMSSGLRQVSKVSKSVRDRLKINRTEIIDLPSNSRAVPLASDLHSLDGYQSDLAIIDEFALARNDEILRTLKSGQINSDNSLLAVISTTGPDLNGPMYKEYKFVSKILTGREQADRYFIAIFEQDSKDEAFAPETWEKSNPLLANDERAKTMRPSLQADVDLAAKQGTLRPILVKNFNMWQSARADSYISLDDWEKATIKPPDTMGKDVYIGLDLSKSSDLTSISWLVPEDGYLYADSHSFVGTKYGLEEKIKRDGFDYISGASRGECSITKLDSGMIDYDEVLRFIIDLIEQNQWNVRAICYDPWSFGYLLPEFEKRDLPMIEVRQGQRTLSIPTVRFRDDLFNGLLKHADNQLLAYAVNNAILKYDANNNAIINKAHNATKIDPLAALMNAYTIAMDQSKESEVADNDFYSSDDFSF
3001029..3002210                   PHAGE_Entero_EFRM31: portal protein; LC2W_3096; phage(gi327198113)                   4e-52               MSFFTNDTTQPRDDNSDPFLDALVSMTSNDSGLYVGIGALRNSDVFTAVRVIASDLATNPIEYSDKRISVLLNKAPNDHMTAWAFKFALAANMLLNGNSFARVTKNPSGQVTGFELVPNSQMVVKQDDTTGIISYEYTPDSGRSQRLNANEVLHFKCFTQDGYKGLSPLYSLRDEVGVQKSGHALLKGFFNTGVQGTGILKVNKTQLDTKAKENIRNKFEAANSGDNALKTIILDNDMDYKQLEVNTDVLNLVNSSDWTTKQIAKAFGLPLDRLGIESEHSNAVQSNLIYLQNTLIQYFTCFTSEMDAKLSTGDNRFSFNTDKLFSADPATMQELAVKGLQGGVLTTNEARARLNLSPITGGDEIMVSLNYTPLSNLVTYQDKQKGSASNEPR
3002197..3003753                   PHAGE_Entero_EFRM31: major capsid protein; LC2W_3097; phage(gi327198115)             3e-44               MNQDDVEKRLNPDADLTAADPTTATDSQGQDDPDTQQQEDTTSSPKKLSGYAVVFNSPSKDLGGFKEVVDPHAFDNVDLSDVYMVSNHDFSQVLASTKAGTLTLNVDGKGLQFEATLPDTTTANDAYNNVQAGNLSAMSFTFNAAPDGDTFTKDDSGQVIRTIKQVKSLFDVSLVAIPAYDDTNVQVGKRSYTEWLKTNTEQPEKGDKTMTEKTIIDNKEHTESRAYEDYIRSMGEQRDGLTTTTAGAVVPKEVIEDVWNLKESDYDLAKYVTVKQVGTPVGTYPIALTNNGVLATKAELADVPEIDATLFRGVDYKVATRAGKIYLSNELVEDSEVDIVAEVKNQLKKLVQNTDNSNIISVLTGKTGTNDNFKHITGTGLDDIKQTFNIELDPALSLSVIVNQDAFNYLDTLKDSEGRYLLQPSITAPSGKQLFGAPVIVIANKVLPTDKAGTYRIIIGDFAQAIFLAQKNEVNTQWERFDSYSQGLAVVIRNDYEVVDPDAARIVDITPVAATPKA
3003808..3004101                   PHAGE_Entero_EFRM31: head-tail joining protein; LC2W_3098; phage(gi327198117)        1e-08               MTVTTNDIKNSLRVQTNTDDSLISNYLTAAQDYVHNAVDSTAAIDELQAYSQFDIAVAMLTEFWYQNRGAVTTASQEPPYSVVSMIQQLRGLFTENV
3005090..3005102                   attR                                                                                 N/A                 CCGTGGTTTTCTC
