gi|00000000|ref|CP002617.1|  Lactobacillus paracasei strain LC2W plasmid pLC2W, complete 38392, gc%: 42.64%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
7049..7066                         attL                                                                                 N/A                 AGAACCTGTCTAGTATCT
11390..14554                       PHAGE_Acidia_6_NC_010152: putative helicase; type; phage I restriction-modification system restrict; K01153 type I restriction enzyme, R subunit; LC2W_p16(gi162329381)     5.08e-06            LactobacillusparacaseiMELSFEKEVVKTLTTGSNQWVERKDLYGATPDQLWANFRDKLNNNNYAKLQGYPLTDTEFNQVKRAIEVRTPYEAAKLLAAENGIGKVEVERDDAKLGTVTLELFWKADVAGGKSSYEVVRQAVRPRLAGTQDVDPDRRFDVTLLINGLPLIQLELKKATVELNQAFNQIEKYAQEGKYTGIYSLLQMFVIMTPDSTAYFANAEPDHFNKAFLFNWRTRDNHPVENGLAFTRQVLNIPMAHKMVSEYTVIDQERQSLILLRPYQIYAIEAVMHRIHDHQDGFVWHTTGSGKTLTSYKTAKLAAQDPGVDKVIFLVDRRDLDEQTTSNFSAYAANDDIAINEAQNTGDLMRKLQQNDGKVLVTSIQKLHRAVKKTQAQLATGKQSRFSKTLKQRVIFFVDEAHRSQFGKMQKEIRAAFINSNWYGYTGTPIFNENKKQLKGDLAVTTEELFGKVCHVYNLRDALEDQAVLPFNVEHVTTIGKDTLITRALEKETQRVKARRDKQGRLLSTADEAKIQAKIQAMSVKDLEETYLTPADFETDEHINQVVQYILQKGPRKTSLGHGNYNAILTTSSIEMAQRYYQAFKAAKKTTHNQLDPNWPRIAITYSLSENEDQSAQKHDQMATILKDYNQQYHTNFDLADLNLYNEDVAKRAARREAVFAHLKPDQEINLVIVVRRLLTGFDAPRLNTLFVDRTLAYQELIQAYSRTNRLQNRELKQEGQIVTFRVPAIMEANEREAYKLYSGEGSFNVIIRPTYQQAVLKFQKAVVDLKAIAPTPTAADDLKGTTAKVQFVKAFRQVNQQLNSLSMYNDFTWENSEKAFGIAQPEVESYTGKYLRIKAAVTNQEPEKVPEELAALDFSLAVGSVVLVDYDYLTQLIQDWIDEQQQYTTPDQAQAHMIDYLQNSAKVQASLNKLAETQPQQAQLIREAMPYIEQQMQQSQQQSTPNQVPVALNARELVADYAQRQLVKKTSVFAHTWGLDQTALLRVAREHTVGTDEWHHEQELTQSANLAAALQAQTAAGPKIPAILPLYRIKSQAAWRQFIEHDLAIYLQK
14568..16184                       PHAGE_Acinet_Bphi_B1251_NC_019541: putative restriction-modification protein; LC2W_p17; phage(gi423261981)     3.93e-22            LactobacillusparacaseiMSEKTTQASQLESALWNAADVLRGKMDASEYKNYLLGLIFYRFLSEKTLTTFSDWAGETENVTRKYAQYMDPQFELEGVSVQPSLVEYLQNTLGYLIQPQALYTTLIGKIQAHTFALDDLSQALHDLEQSTQNLSSAQDFSGLFADVDLSSNKLGSSLQQRNQTISDTMLALNAIDLVHHQGDVLGDAYEYLIAQFASDSGKKAGEFYTPRQVSDIIAQIVTYQRNAGDNQVRTIYDPAVGSGSLLLNVGQHVQDPNLVSYHGQELNTTTYNLARMNLMLHGVSYDDMHLRNGDTLSKDWPVDEPYLFDAVVMNPPYSAHWDNSDKRLSDPRFRDYGVLPPKSKADFAFLLHGFYHLQEHGTMGIVLPHGVLFRGAKEGKIRQKLLMDNRIDAIIGLPANIFHSTGIPTLIMILKKHKTTDDVLFIDASREFEKDKNQNKLTAANIQKIVTTYQNRQDVDKYAHVASPAEIKENDYNLNIPRYVDTFEPEPEIDLNQVKADLKQLDEEISQNEQAFNELASQLVTTQVNDQSKPEAHK
16801..16920                       adenine-specific DNA-methyltransferase; LC2W_p18                                     N/A                 LactobacillusparacaseiMLILRTCLVSAESGRIVENRLRSLSCQIIQAIFLERNLR
17192..17662                       PROPHAGE_Xantho_33913: IS1480 transposase; transposase; phage IS4 family protein; LC2W_p19(gi21231089)     2.04e-56            LactobacillusparacaseiMIVDAQSVKTTDLTKNSGYDGAKKISGIKRHMAVDINGLPQAILVIRANVLDRSGALAMFSLASQNLELVQHVMVDGGYTGNDFADQVKLILNAKTTVAKRNELHMFTVLPQRWIIERSWSWLEKCRRLWKNCERALNSSLQMVVLAFLKIVLKRY
complement(17670..18029)           PHAGE_Lactob_phiAT3_NC_005893: hypothetical protein; LC2W_p20; phage(gi48697296)     2.42e-08            LactobacillusparacaseiMNREVVRKLVQVYIDRNKLSNPEFAKQAKINDRTVRRLLNSEDSISDQTLEKMAAVCEKRKFAVIGFSTGKIYFRGEHHADCTRWINEQAVQIKKAHSHKKIALNMKEPMIIQRLPFAS
complement(18035..18928)           PHAGE_Strept_315.6_NC_004589: streptodornase; Mf4.1;; phage LC2W_p21(gi28876439)     1.50e-14            LactobacillusparacaseiMKLTTKWFLALSTVLAISISGCSAVQGSNTSQSSTTKSAASSATSTRTTETAQTNSDLANLPFDLTKYPQNYTTLNQNVPIFVNGFKQTVAAAQKAKTTRAQTYFEGLDDLGRTQSVSAIVTYSIMHSHASSVRKRPAFPKTTKVAGEYADGVYNKNLQQWFGRSNNNRMVQLNGYRGYLYNKSHLLAWSLGGDMQTHNVILGTRAQNVGTNDQRNPGGMAYTETLTRNYLSSHQDDAVAYQVIPVYVGQELVPRGTHVLVQSINNPSQFQANVWVFNTQSGVTINYNNGSFQLNGE
19018..19701                       PHAGE_Staphy_SPbeta_like_NC_029119: integrase core domain protein; transposase;; phage LC2W_p22(gi985761246)     1.59e-78            LactobacillusparacaseiMNHFKGRHFQKDIILVAVGYYFRFSLSYRDIVELLRDRGITVHHTTVMRWVHHYGPIFKALWRRHQTAHAKSWRIDETYIRVKGRWAYLYRAIDSNGLTMDFELRKHRDYTASYHFLKRLLTTNGRPDRLVTDQYRATLKAVKHLIKQDYLSKSAHQCSKYRNNLIEQDHRFIKRHRVRSASFQSIRTASATLSGVEIVHAIRKRTRRELSLIGFSVVDELEALLAA
28438..28455                       attR                                                                                 N/A                 AGAACCTGTCTAGTATCT
