gi|00000000|ref|CP002641.1|  Streptococcus suis D9, complete genome. 2177656, gc%: 40.99%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
2140735..2140749                   attL                                                                                 N/A                 TGGATCAAGTCCTGC
complement(2154492..2155106)       phage protein; SSUD9_2176                                                            N/A                 StreptococcussuisD9MTDDTEIRKLFQIYQTTRENKDMTLNTFSDTANTFTFNYTFKDHDTAQVAGHALMGYMTGTFEQPGIEVYYDNDKVGGDYNRLAVEYVADTELTETFRRICDSFQGYYNDPEAETDVEDQYRLERVEQLKQSETFDSLLEKVVIYELELLDYAERLLSDDPIPTDTEMAYMTLNLIGGKGVGLFKSLDEDNEYSGLAYYNAEAE
complement(2155118..2155576)       hypothetical protein; SSUD9_2177                                                     N/A                 StreptococcussuisD9MKEQEFFEQAEKELEELNQHRADFMTMDFKELNNADYINFLNIGNRIFSEDTTLNVYELYKHPDTRAKCFATIAKIAYHVNNMFQTEERMRTMIDSLELHFQNMVKKLVHQTDSDKLAELLLEIKKDNPNMTAEQESQFIRDIAVSGLLAMQ
complement(2155589..2156404)       PHAGE_Strept_phi3396_NC_009018: putative replication protein; SSUD9_2178; phage(gi126011075)     1.49e-79            StreptococcussuisD9MAKTKIYFWLKIDKKFFDNIFIKRLKTIPGGYTMTVIYIRLMLESLESDCILYYEGYFENLKEELALKLDVSEDDIDMTMAYFTKCGLIQIDEDKNAELPQAKAMVMSETNWASYKREQRQNKERLDNVQKSLTNSNSCPTEIEIEKDIKKDIDINIELEVDNKKTATDTNIYDYYQQRIGSLDGYQYEKLKDYLDIDKLEPELVKRAIDRGADNSKRNFGYINKILKNWAQNGIRTIAQQDEEQRQFVDSKANKQKSNDWVPDPNYPPPY
complement(2156391..2156675)       PHAGE_Lactoc_bIL310_NC_002669: hypothetical protein; SSUD9_2179; phage(gi13095880)     3.80e-07            StreptococcussuisD9MRLELTAQSEIDLKTGILELIENYLEAREQTPPRLLGLITAQQVKDELGIKDKTLKRWEDNGLRRYQPPLEDTRKIFYRVSDILVFLGVENGKN
complement(2156665..2157003)       PHAGE_Strept_T12_NC_028700: hypothetical protein; SSUD9_2180; phage(gi966201497)     1.10e-12            StreptococcussuisD9MTENRLPPHLYKVFKLLPLGMELPITGADMERLTGLDIRTIRENIRQLIVDYGIPVCGGRDNKQGGYYIPQNETERLAGVLPLQRQYDQEHKRIHALLTADLEDWRKYRDEA
complement(2157000..2157149)       hypothetical protein; SSUD9_2181                                                     N/A                 StreptococcussuisD9MLTFRELERIAETILKHTTPEETQCYLDMDHDSKLLWIKYKIASLEVQA
complement(2157161..2157364)       hypothetical protein; SSUD9_2182                                                     N/A                 StreptococcussuisD9MQEMTIETALTLIAIFTPLNLYLWFGVGLGTYQLDIEPKIKTEGKDTRPLKNERYGAYIQLAGKHYN
complement(2157352..2157753)       hypothetical protein; SSUD9_2183                                                     N/A                 StreptococcussuisD9MKDNNRETIIHFEMSNQEYAPVKNAISEELEAVIRKVYQLDHETGWTLHYLTEIMLNHFHEDVARVQYGDLTPIECSLNSITHRVESAKVALLKAGYEDKIEVGNPMWYLKLILQDFEHMKKLAKKEVKKCKK
complement(2158217..2158843)       PHAGE_Lactoc_bIL311_NC_002670: Orf3; SSUD9_2184; phage(gi13095661)                   4.54e-30            StreptococcussuisD9MELVYMDGRKEPYTLSSIVAECANISHHAVQEHIRKQKDRLERFGKVSFQMRPLPSGQQAKDYILNEQQATLLITFLKNTEQVANFKENLVKAFFEMRDELAQFRYQRALEKPKRKALHEAIETWQEAPKHAHSTVTNLLLKGTTGMNKRQLMAHRGGHNGIDSLTSQELIRYQALEDMAIAMINLGMTYQDIKNMVFRPLKNAPQGA
complement(2158856..2159602)       PHAGE_Bacill_Stills_NC_028777: baseplate hub subunit; SSUD9_2185; phage(gi100101)     2.82e-28            StreptococcussuisD9MRRNYSKVIEEMRTIHGLNLVAIGQRIGTDPRTVGKWAQGKHQPNKDSRKKINNLYREVKQSMTTQTTIEPFEDFYDWSKMKKKKPTTEVIATQQFGNKSFEIYGNKDNPLFIAVEVAEMIEVQNTTDLLKRIDEDEKLTYVISRAGQKREVNMLTEFGLYEVLFQSRKPKAKEFKKVVKNILKEIRVNGYYMQGELIQDQPTQSAIELNSDMAYIKNRLAELQSMTTMADIKIGLAKTYRIAELMED
complement(2159621..2159848)       PHAGE_Lactoc_BK5_T_NC_002796: Cro repressor; SSUD9_2186; phage(gi14251161)           1.40e-14            StreptococcussuisD9MTQWTLKACRVNAGYTLRQVAKKVGKNFQTISKYEKDSTIIPFELLKDLSKLYRVKLDDIFLGDSTKKIELTPEE
2160002..2160715                   PHAGE_Strept_EJ_1_NC_005294: cI repressor; SSUD9_2187; phage(gi39653678)             1.02e-19            StreptococcussuisD9MAKNSPQDIKNREYFSANLNRIMKEKGVRQIDIHNDLDIPKSTITGYVKGRSLPTSGNLQKLADYLNVKKSDLDSRFSNNDVYKEFLLMLEKQLEEKKYLVNSVSKEKIFQKVKERERRDKELIERVKGMNRSVKPEEFLSTITESLEEYNPKNDYGLLMDLALKTSSILFWLDIVFQKRTSEFYIVFEDKNFNENYYTHFYEKINVLFEEIKAAALEEARKDKNDFEDYKLTWGLD
2160893..2161909                   PHAGE_Staphy_EW_NC_007056: ORF014; SSUD9_2188; phage(gi66395821)                     8.73e-115           StreptococcussuisD9MYILATSINLNFYISCILAFVSNLRVLSSCFSKSADLVKVIPINFVDANKTVNPITILERLIMVKINANGKEITLLSTNTDYVSLTDIAKYRNPDAPADIIKNWMRSRNTIEFLGAWEKINNENFKLVEFDQFRSEAGLNGFVLSPQKWIKETNAIGITSQSGRYGGTFAHSDIAFEFASWLSPEFKLYIIQDYQRLKQEEAYKNQLDWQVNRYISKLNYTIQTDAIKENIVPTLQPYQISFPYSSEADLINVALFGMTAKEFKNAYPDREGNQRDNATIEQLLVLNNLQSLNAEMIKQGLSQSNRLTELNRIAKEQLDVLYKNNQKALDSLKRLSDK
2162074..2163246                   PHAGE_Lactoc_bIL311_NC_002670: integrase; SSUD9_2189; phage(gi13095659)              8.56e-68            StreptococcussuisD9MIMKITEVKKKNGATVYRASVYLGIDAITGKKVKTNVTGRTKKEVKNKTQQAIATFKTDGATRYQNATITSYKELAELWWNSYKHTVKPNTRGNIRGLLKNHVIPLFGAYKLDKLTTPLLQSIVIKLADKANTGEAGAYLHYDKIHALNKRILQYGVVMQVLPYNPAREVILPRNAKKATRKKVKHFNDEQLKQFLGYLDGLDLTNYRNLYEATLYKFLLATGCRINEVLALHWSDIDLNNATVSITKTLNRYGSINSPKSNASIRDINIDSQTVAMMKEYRRRQIQEAWTLGRSETVVFSDFIHDYPEDKTLGNRLTTRLRNIGLPNIGFHGFRHTHASLLLNSGIPYKELQHRLGHSRISITMDIYSHLSKENAKNAVAFYEKALGNL
2163384..2163767                   S4 domain protein YaaA; SSUD9_2190                                                   N/A                 StreptococcussuisD9MEFKLFDDYITLQALLKTTGILHSGGAIKGFLEENTILFNGEDEKRRGKKIRVGDVITLPDHNTSITIVAPSAEEIKQHQEDQAEKERVAAIVKKLNQENKKNKKQVKTPKRATKNTERKPVRFPGM
2163770..2164864                   DNA replication and repair protein RecF; SSUD9_2191                                  N/A                 StreptococcussuisD9MWLERLELQHFRNYNQLDIEFHKGLNVFLGENAQGKTNILESIYVLALTRSHRTRTDKDLLQFQEKELSISGLLHRTSGKVPLDIHLTDKGRVTKVNHLKQAKLSNYIGHMNVVLFAPEDLQLIKGAPALRRKFIDVELGQIKPLYLSDLSNYNHVLKQRNTYLKSTDKIDENFLSVLDQQLAEYGSRVIQHRIDFLKKLEEFGNRKVQEISGNREELTIEYQTSIKLTDDVNLIDKFLTELERCRKRDLFKKNTGVGPHRDDVAFFINGMNAHYGSQGQHRSLVLSLKLAEIELMKEVTREYPILLLDDVMSELDNNRQIKLLETITDTIQTFITTTSLDHLHKLPDSLKIFHIESGKVTESE
complement(2165133..2166614)       PHAGE_Staphy_42E_NC_007052: ORF012; SSUD9_2192; phage(gi66395520)                    1.07e-38            StreptococcussuisD9MSNWDTKFLKKGFTFDDVLLIPAESHVLPHDIDLKTQLAPNLTLNLPIISAAMDTVTDSKMAIAMARAGGLGVIHKNMSIAEQADEVRKVKRSENGVIIDPFFLTPEHTIAEAEKLMATYRISGVPIVETLENRKLVGIITNRDMRFISDYSQPISTNMTSDALVTAPVGTDLATAEAILHKHRIEKLPLVDENGRLSGLITIKDIEKVIEFPNAAKDEFGRLLVAGAVGVTSDTFERAEALFEAGADAIVIDTAHGHSAGVLRKIKEIREHFPTRTLIAGNIATAEGARALYEAGVDVVKVGIGPGSICTTRVIAGVGVPQVTAIYDAAGVAREYGKTIIADGGIKYSGDIVKALAAGGHAVMLGSMFAGTDEAPGETEIFQGRKFKTYRGMGSIAAMKQGSKDRYFQASVNEANKLVPEGIEGRVAYKGSVADMIFQMVGGLRSGMGYVGAGNLTELHENAQFIEMSGAGLKESHPHDVQITNEAPNYSVQ
2167641..2167655                   attR                                                                                 N/A                 TGGATCAAGTCCTGC
