gi|00000000|ref|CP002644.1|  Streptococcus suis D12, complete genome. 2183059, gc%: 41.32%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

#### region 1 ####
1166675..1166686                   attL                                                                                 N/A                 GGCTCAAGAAAT
complement(1167916..1169001)       PHAGE_Faecal_FP_Toutatis_NC_047915: methyltransferase type 11; SSUD12_1150; phage(gi100001)     1.07e-25            StreptococcussuisD12MKKVITIQATPSIIRSSSDDFSLKKRRVAGYARVSTDHEDQATSYESQMRYYSEYINGRDDWEFVKMYSDEGISGTNTKLRTGFKAMVEDALNGKIDLIITKSVSRFARNTVDSLTTVRQLKEVGVEIYFEKENIWTLDSKGELLITIMSSLAQEESRSISENVTWGLRKQFAEGKVHFPYTNVLGFKAGEDGAIVVDQDEAKTVRYIFQQALIGKSPYHIAKDLTEQGILSPSGKSHWNATTIKRMLRNEKYKGDALLQKTYTIDFLTKKKNINRGELPQYYVENNHEAIVDRETFDAVQQVLDNKGRKSSTTIFSSKLVCGDCGHFFGSKVWHSTSKYRRVIYQCNDKYKSSGKKSIES
complement(1169001..1170236)       PHAGE_Clostr_phiCTC2B_NC_030951: methyltransferase type 11; SSUD12_1151; phage(gi100001)     3.74e-22            StreptococcussuisD12MRTVRRIQPIKSPCKPRFKVAAYARVSDSRLHHSLSTQISYYNRLIQAHPDWELVGIYYDEGISGKEQSNRQGFLNLIKDCEDGKIDRIITKSIARFGRNTVELLTTVRQLRLKNIGVTFEKENIDSLSSEGELMLTLLASVAQEESQNLSENIRWRIQKKFEKGIPHTPQDMYGYRWDGEQYQIEPNEAKVIRKVFKWYLDGDSVQQIVDKLNQEQVLTRLGNPFTVASIREFFKQEAYFGRLVLQKTYREAFSRNPKRNKGQRNKYIIENAHEPIVTKEYFDLVLHEKERRNQLMHQESHLNKGIFRDKISCSECGCLMIVKVDSKQVNKTVRYYCRTRNRFGASSCSCRTLGEKRLLASFKSKLGIVPDKEWVENNIKHIEYDFGYRILRVTPVKGRKYLIEIREGRY
complement(1170294..1170455)       phage lysin; SSUD12_1152                                                             N/A                 StreptococcussuisD12MDVQKFNNEMTYQLTMIQAKILLKKGSITIEEFELFRQLMLEKYQPFISQLST
complement(1170562..1172031)       PHAGE_Strept_Str_PAP_1_NC_028666: endolysin; SSUD12_1153; phage(gi966198635)         8.70e-48            StreptococcussuisD12MGKHLVICGHGQGRTGYDPGAVNAKLGITEAGKVRELSKLMSKYSGQQIDFITEQNVYDYRSITSIGKGYDSITELHFNAFNGSAKGTEVLIQSSLEADKEDMAILSLLSRYFQNRGIKKVDWLYNANQAASRGYTYRLVEIAFIDNEQDMAIFENKKEDIAKGLVSAITGVEVKTIVPSPPSSTVGSSGTPSKSIYLVGDSLRVLPHATHYQTGQKIANWVKGRTYKILQVKNVHQSNSKRAYLLDGIKSWVLEQDVEGTTKGHSEQTYQAQKGDTYYGIARKFGLSVDTLLVVNGLKKSDILKVGQTLKVNAASRTTTAIPTSVASRVVASALSKVGQKVTVPSNPYGGQCVALVDKIVQELTDKNMSYTNAIDCLKKAKSNGFQVIYDAWGVNPKAGDFYVIQTDGMVYGHIGVCVTDSDGKSIDGVEQNIDGYSDHNNNGINDQLEIGGGGITRRVKRQWMANGSLYDSTGTVKLGKVVGWFRIS
complement(1172038..1172433)       PHAGE_Paenib_PG1_NC_021558: holin; SSUD12_1154; phage(gi514231208)                   1.52e-23            StreptococcussuisD12MKELLTLNKILFSMIGGLIGSLFGELDGILYALLVFIIIDYLTGIFAAIVEKQLSSSIGFRGIFKKIAILFLVSIGHLIDTAIIKQGGTIRTMVIFFYLSNEGLSILENTVRIGLPIPEKLQAILKQINER
complement(1172411..1172779)       PHAGE_Strept_phiARI0462_NC_031942: hypothetical protein; SSUD12_1155; phage(gi100004)     4.65e-42            StreptococcussuisD12MALLNIDKVTEPFDLATALAYMRKNGEFIRCKTAEQDFYMYLEEVRRPAIKNGKRQLITTETVWAFNQWGSTTLTLNLSDLFHDCFYLMRFDENGQPDWSDPSNVQEGSVESEVTDEGIVNT
complement(1172785..1172991)       PHAGE_Strept_phiARI0131_1_NC_031901: hypothetical protein; SSUD12_1156; phage(gi100009)     1.24e-10            StreptococcussuisD12MNLEQINQSLKLTIQELVTKLSDEITAKNLIAIQLVERDEELSQLRKEKQELTELLEVQTKPEEGKGE
complement(1173004..1177551)       PHAGE_Strept_phiARI0131_2_NC_031941: hypothetical protein; SSUD12_1157; phage(gi100005)     2.78e-125           StreptococcussuisD12MLSLLDKTVRTAKWHGKPLPETIKASVKETLNGDFVLNFTYPITDSGLFRELKEDYLVRSPVPVLGHQLFRIKKVIEGDTSLEVVAYHISDDIMTRLVSQFRCEQVPCATALSSMVMASKSPLGDFSFTSDIVKNRTYTTDKEQTLYSSLMDGKHSILGTWEGELVRDNLALTIKGERGQDRGVVISTHYNLKKYQRTKESTQIITRIHATSSFKQEGQDRETVLQVTVDSPLINSYPFINEVTYTNNNLKTRQELIEWASSKFRLEGIDKPKDAIIIEAFELDGQTVHLGDTVTLKSKLHGIDVRKKAIAYDYDPLAKNYRSITFDDKASIGTGKTGGSITTLANNLIDGNKRSEDVAVEIALENANKAFDAEFEKRQVAIDNAIEQAQSHGEVYADRLKASIDNELSSIHQQMRQHEEEQQRTTRDLMAKAGVNTNLATEAKQKAEQAQTGATEALRRAEQAKLDAIQEANRLTSTERSQTELKIATAKSQAISEASRLVDVAKALLGGQLATVSTNLSQTKEDIKLLASKQLVDSLTGRVTGAESMIQVQADQISQRVKTSDFNQAKQRIETAESTITQLGNRITTEISQVDSKIPTSLDGLNLMTGTRDWSNKGNAWHLGNNWSTETENFRGLVVRSTQAGFNGSHQNIVVKAGDVITFSFYAKANQPLSSIKVSAIWTGSSVYRAPVARVRESDDIISVTSDWKRYWKTVHVLSDGSLQFRTEYNASTIPNGNKFYVAGLKVAKTSLDTGYSENPADIAGELTTQRTLITQTASGVEQVSTRLTEASGKISSSETQIRQLVSDVSSKVSQTDFNNLKRTVEGHTTSIQQTQQSILLKADKTVLEGVKTTADNALAKANTNASQITQTKADLRIANDSISQKVAKTDFNNLSGRVASAETTIRTQAGQIEQRLTSTQVESAINSKGYQTKSQVDSNITGRGYLTSSSLQPYATTTSVQNLVRTTSDSFTQRISQTESRIPTSVSHRNLIAGTSDRWGAYQTINASSNWIASLGRVQFGDGSGIYVGSKVHLYVHISADEITFDPAVTTRTMKLQGPILDSQNVRTWTNWNLYHPFYNKWSSNLTTGNNYRLIKLTATVTQEMYQHSKGFELQVRIDGVKTGKFHVRALMVSTGDIFPDYWTPSLDDFTTVTAFHEVRDTVSSHTRTIGDHTNQISQVVQTATGIVTRVGNLETSRATMAAVNAIQTQVSTLAGSWSVRNLTSAGTVLSQLNLNKDGTVKIDGKLVQITGTTYIQDGVIASGKIASLDAGKITSGIISAARIGAEAITADKLKVDQAFFTKFMATEAYLKQLFAKSAFITQVQSVTLSANKISGGILSAINGAMKINLSLGNIKFFTNSPSISREVSGYPHQWVSFETGTSNGKPCGVTIIGSNRWNNWNANDGGFVGIRAWNGTDTDQIDVVGDKVRLASAPYTNPDGWEIVTLPNRLSIDAYKASDRPSSILNIGDIRIYRNGTTYVSLKDVLHQFNHNFKHLVNITGRGDVILTWDTIK
complement(1177553..1178275)       PHAGE_Strept_phiARI0131_2_NC_031941: hypothetical protein; SSUD12_1158; phage(gi100006)     3.20e-102           StreptococcussuisD12MIRHNALTIGGVSTASFPFKVIVEDSPSITVSESKTQLIEHQGLSGAVIQTNPRRSVMELSYTLYLVKPSEEQLFSFLKLFLKEEFWLENASFKTIRFWCYKVHHTPVQKDKLGVYELKVTFSCHPTKWFKTTTSQVFRTSGVMRCQGSAIAFPKITISGNSTSETSFTIGEDVIRLERLQETLIMDNNPSQPSFKTQRGQPVKWSGDFLSIDAGRNDSVGVVLGAGITSLTIEMNWGWA
complement(1178272..1181130)       PHAGE_Strept_phiARI0131_2_NC_031941: hypothetical protein; SSUD12_1159; phage(gi100007)     0.0                 StreptococcussuisD12MAGNIKGITIEIGGDTQPLQDALKGVNKQASEATKELRQIDKALKFDTGNVTLLTQKQEVLAKQVETTREKLATLRQAQAQVEAQFKAGDIGADQYRAFQREVETTQRLLTSYETKLADVSSTLENHGRASSSVAQQLDKLQVEQGQLASEMNKVTSQFELQESALSSNSSEAERNAIAQQKIGAQSEIVSKQISNLEKQLALTKSEYGENSIEANKMEAELNQAKTALNNLNNEMDETKSSADGAQDGMKAMSDTIRAEALQATSEKLANISQKIFEVGTESMSAAAQLQASNAQFSTVFGDMENAAKDALNKIGEEMDIVPERLQGSFTQMASFAKTSGMDTAQALDLTTRATRAAADGAAFYDKSIEEVTENLQSFLKGNYENDAALGISATETTRNAAANKLYGKSFNELSEAQKQLTLLQMVEDGNELSGALGQAARESDGLENVLGNLRQSGTNALAAIGQPILEMLIPVFQSLADIVSQLATWFTNLSSPIKEVVIIFTGILAVVGMLLPVFLGLQVAAAAMGTTVVGMITAFLPIVGIIFGIVAAITLLIVGLKELWTNHEGFRTTVMEIWNSIHAFLTMIIQQISSFVMSIWGTLTTWWTENQQLILNAATTVWNAITTVIQTVMTILGPLIQASWENIKLIITTAWEMIKIVVETAINVVLGIIKAVMQVITGDWTGAWETIKQVLATAWEGIKSLISLALNFIAQYITTAWTGIKNTIANLLSAISSVVFSVWTAIQSTISSILSNIGSTVSNIWNSIRNTVSSVLNGISSTVSSVWNGVKNTISNAINGAKDAVSNAINAIKNLFNFQIRWPHIPLPHFRVSGSANPLDWLKGGIPRISIDWYAKGGILTKPTAFGVNGNSLMVGGEAGKEAVLPLNEQTLGAIGRGIAKTMTSNLPTIHITITGNTVREETDLHRLAEMVGEKLVYELQRQQGLRGVKP
complement(1181149..1181280)       PHAGE_Geobac_GBSV1_NC_008376: hypothetical protein; SSUD12_1160; phage(gi115334638)     1.85e-06            StreptococcussuisD12MTIDDLKHISIGMALDYQTDYVEMRTRETSQTRPATQADFDNF
complement(1181313..1181732)       PHAGE_Strept_phiARI0131_2_NC_031941: hypothetical protein; SSUD12_1161; phage(gi100008)     9.86e-60            StreptococcussuisD12MRESITIAGTTYELATNAYTPIAYKEQFGKDYFQDLFSMVNSQAILAKLDQLEEGEDLQAHHIDVSILSDFDMTFFHRIFWVFAKSANPRVKPFVDFYMEMEEFPVQDIAPVLMNMLNQGMSTRKKQMKQKQRVRKSSQ
complement(1181744..1182313)       PHAGE_Strept_phiARI0131_2_NC_031941: hypothetical protein; SSUD12_1162; phage(gi100009)     5.06e-67            StreptococcussuisD12MAEKNKVTFGLQDVHWAEVTSEGSDGTLTYGNVERLRGAAELTLEPTGDKGSYKADNINFYTTESNDGYEGTLKVALLTQEFLTRVLGEQLDATTNTISEIANSEKKNFALMFRFEGDKKETLHVLYYCYASRPTVGSKTKSGSDINEVELTFTASPRPLDKVVRRRTTEETSDEIRQNWFKAVFEPRK
complement(1182315..1182641)       PHAGE_Strept_phiARI0131_2_NC_031941: hypothetical protein; SSUD12_1163; phage(gi100010)     1.13e-11            StreptococcussuisD12MFLSEMYSILKELQLPVAYHHFEEGSHPRPPYLVYLVTDSDNRGADNWTYHKQNNLQVELYTTKKDLATEQKVESLFDSHLIYFEKVETYISSEKLYQITYYITLHGG
complement(1182648..1183016)       PHAGE_Strept_phiARI0131_2_NC_031941: hypothetical protein; SSUD12_1164; phage(gi100011)     1.21e-18            StreptococcussuisD12MTKIGLNALETAIANELAEFVEDTTEVMREVVEEVTEESIETLKATSPRKSGSYAKGWKSKATIDTSTGLTKTIHNRTPGLTHLLENGHAKSSGGRVEGIKHIAPVEKQAIQSLEEKLRKRV
complement(1183009..1183347)       PHAGE_Geobac_E2_NC_009552: putative head-tail adaptor; SSUD12_1165; phage(gi148747735)     1.34e-05            StreptococcussuisD12MKIAPLRERLSFHVRQIVQDEIGNESSTWIPLFERWCSCRPLTLTERDGSVTKLEQEKVQFTLRYEKAILGLHSLTTHIQFRGQTYEIESIDGDTVPKQLIYIVAIKEESYD
complement(1183347..1183607)       hypothetical protein; SSUD12_1166                                                    N/A                 StreptococcussuisD12MMVSLVEAKQYLKVEHDDEDGLIEQLLETSQQLCEDILRQSIYSGVLKTAILYGVAYLYEHREDANHKELKETLYHLLLAERKDVF
complement(1183607..1184812)       PHAGE_Burkho_KS9_NC_013055: major capsid protein gp5; SSUD12_1167; phage(gi255033737)     2.86e-40            StreptococcussuisD12MSKLLELKEKRNQAWQQAKTFLDSVRSEDGLVSEEDSKRYDDMEAKINLYNQEIARLERQEKIDLELSQPASQALISQPTTVLNDKTTEEEKQGVASDSYAKTFWTSVRKRHFFDVKDVLRVGEDTEGGHLVPDEYEKKLVQGLQEENFFRSLATVIKTSSGERKIPVVTGHGSASWMDENGLYPETEETFGQVTLDSHKIGTAIRISEELLNDSVFDLESYMTAEFARRIGTEEEKAFLIGDGSKKPTGIFTQADVTGPTTATKDITFDDMIELYHSLPAPYRKNAVWILHDTTVKAIRKLKDNNGNYIWQPSTQAGQPDLILNRPYYTSTFAPLPEAGNKAIAFGDFSYYWIADRQGRTFKRLNELYANNGQIGFLASQRVDGKLVLPEAVKTLTVKAK
complement(1184831..1185526)       PHAGE_Clostr_phiCTC2B_NC_030951: holin; SSUD12_1168; phage(gi100034)                 7.85e-38            StreptococcussuisD12MHKFWNFTDDDSGRTLRIEGQIADETWFGDEVTPQVFKNDLHAGNGDITLWINSPGGDVFAAAQIYNMLMDYKGDVHVVIDGLAASAASVIAMAGTTVSMSPVAMMMIHNPWTVAQGEAKDMQKVIEMLGEIKESIINAYELRTGLSRTKLSHLMDSESWFNAKKAVELGFADKILFDKQEDQGLETKSYSFSRTAAQQDLLVKMQAKLEVQQPKKTIPLNQLEKRLNLLK
complement(1185519..1186802)       PHAGE_Burkho_phi6442_NC_009235: gp4, phage portal protein, HK97 family; SSUD12_1169; phage(gi134288632)     7.14e-88            StreptococcussuisD12MGLLDLLGRKHARDKPRNSYEGQDFSYLFGRTTSGENVDEFKAMQTTAVYACVRILAEAVASLPIHVYERTATGKEKKVEHPLYFLLHDEPNPEMSSFVFRETLMTHLLIWGNAYVQIIRDRSGQVISLYPLLPDKMSVHRDESGKLYYKYKRQSEENPNFKEKGDAILKAEDVLHVPGLGFDGLIGYSPIALAKNAIGMTLATENYGASFFKNGANPGGVLEHPGILKDPKRVRDSWNAVYNGVTNAHKVAVLEEGMKYTQVGIPPEEAQFLQTRKFQINEIARLYRIPPHMVGDLEKSSFSNIEQQSLEFVKYTLDPWVVRLEQAFKRSLFLPEEKKTYFVKFNVDGLLRGDYQSRMNGYAIGRQNGWLSTNDIRELEDLNLLSDEEGGNLYLINGNMTKLKDAGGFMKQAPPEQETQSEEDMDA
complement(1186860..1187204)       PHAGE_Prochl_MED4_213_NC_020845: hypothetical protein; SSUD12_1170; phage(gi472340277)     4.22e-08            StreptococcussuisD12MATKARIGLLTKNHTAQTIEIAYEGYPEYTGELLKKHFKSSKEIRALLQKGDIIQLEDSLDKIEHDDLQGNAQQHRFIGDISQLAEDTLADYIYLFQESDRTWYLLEEGEMKNI
complement(1187299..1188891)       PHAGE_Strept_Rowa_NC_047906: hypothetical protein; SSUD12_1171; phage(gi100002)      3.34e-100           StreptococcussuisD12MSYHYEPSPFMLPTSHYDKAKADRAVTFINNLSHTKGKWAGKRFDLLPWQEQIVRDLFGIVKEDGNRQFLTAYIEIPKKNGKSELAAAIALYLLYADNEASAEVYGAACDRNQASIVFDVAKQMVQMSRPLEKRSKIMGATKRIVNYSNAGFYQVLSAETGTKHGLNVSGLVFDEIHAQPNRHLYDVLTKGSGDAREQPLFFIITTAGTDRNSICYELHTKALDILNGRKKDTSFYPVVYGLSDEDDWNDEANWLKANPSLGHTIGIDRVREAYQQALDNPAEENVFKQLRLNMWTSSSVAWIPEHVYAKGNDPIQYESLKGRSCYAGLDLSSTSDITAFVLVFPPRFEEENYIVLPFFWLPEDTLELRCQRDHVLYDVWERQGYIKTTEGNVVHYGFIEKFIEDLSEIYHIKEIAYDRWNATQMVQNLEGMGLTMVPFGQGYKDMSPPSKELYKLMMEGKIQHGGHPVLKWMGQNVVMRQDPAGNIKPDKEKSVEKIDGIVALIMGLDRCIRHQTDEGSVYDERGILSF
complement(1188888..1189361)       PHAGE_Burkho_phi1026b_NC_005284: gp1; SSUD12_1172; phage(gi38707891)                 5.53e-19            StreptococcussuisD12MAIRGRKPKPTNMKILEGNPGKRPLPSNEVKPKQKAPRCPQWLEDDAKKEWKRMGKILEQMGILTEMDMTAFAGYCQAYARWKEAEEFLSKHGSIIKTPNGYLQQVPQVSISQTNLKIMLKFCEQFGLTPSARNRLATMDAEVGSGDEMEDLLGGIL
complement(1189412..1189642)       hypothetical protein; SSUD12_1173                                                    N/A                 StreptococcussuisD12MWEIMTRTVGDRHYICEFLREDTTDPRNIDGAWIRILTIKRDGEYIYQYRYGNEIDNMDDIDRTVCQAVLDNFNEL
complement(1189644..1189856)       PHAGE_Bacill_SP_15_NC_031245: hypothetical protein; SSUD12_1174; phage(gi100310)     4.32e-09            StreptococcussuisD12MDAKIFNNLKTIYPVGTKVRLVRMDDPHPVPKGTLGTVIGVDDIGSLLVKWENGSCLNVLYGIDIVEKVM
complement(1189858..1190106)       hypothetical protein; SSUD12_1175                                                    N/A                 StreptococcussuisD12MTTTLEKLYDIYPATASIIPYKDWVIVASNGYKGTEVEIYETTDSLEEFENFERRFDRIYQEAGTFEDFGHAVKWAFEKIGE
complement(1190179..1191459)       PHAGE_Clostr_CDKM15_NC_048643: head morphogenesis protein; SSUD12_1176; phage(gi100068)     1.37e-118           StreptococcussuisD12MTLTFLDFFAGVGGFRRGLELAGFKCIGYCEKDKFARKSYEAMYDTKGEWFHDDITSIDPTQLPKADLWTAGSPCQNVSIAGKRAGLYGERSGLFFTFVDLLQSQEEEDKPEWILLENVKGLLSSGGGRDYLDYLSILDEAGYDLEWQVFNSKDYGVPQNRERIYTLGHLRSRGRRKVLPISGESGSHLKQLVGGMQSYRVYDPSGIATTLVGEGGGLGAKTGLYLIDQSLTEPKLTDEARCITARYTAGATKRTAMNSGVLEIQPILTPNRINKRQNGRRLKEQDEPMFTLTSQDRHGVLEGIKVRNGTKQGYQVAEVGDSVDLSYPNSPTRRARVGKGIAHNLSCGGQMGAVVWNDRVVKIRRLTPRECFRLQGFSDDLFEKAQAVNSDAQLYKQAGNGVTVTVVYAIGCAILASEELSKLSSK
complement(1191456..1193567)       PHAGE_Faecal_FP_Epona_NC_047910: u-spanin; SSUD12_1177; phage(gi100032)              2.46e-76            StreptococcussuisD12MTSQPTMEIREIRLSELHPASYNPRKKLKKGDKEYEKIKQSLLKFGYVDPIIVNKDLTVIGGHQRLTVLKDLDYETAKCVIVDLSKEDEKALNIALNKITGQWDDQLLADLLLDLQESDFNLDLTGFEPPEIDDILSNVHDKDLSDDDFDVEEELKKPTFSKRGDIWQLGKHRVICGDSTKAETYDQLLGDKKANLVVTDPPYNVDVEETAGKILNDNMPDSDFYQFLFDMFTQVEKHMESDGSIYVFHADTEGLNFRKAFKEAGFYLSGCCIWKKNSLVLGRSPYQWQHEPCQPAGTIVQTINGPVPIEDLKDGDRVISYNSYSGTILGMRNGGYEIKTASRYYNGTLYGIKIGNKITWATDNHQFSVRFNESTKNNYCTYLMRKGDRWRVGITELYNSRGFGLKTRLRGEKGEEAWVIDVFDDKVTAQCHEQLLALKYGIPYTHWEMDRGLPKKETQRTSHHVDMIYDNLDSQIQLDNARRLLVDYGRNIKYPLIHKGNGHEAFSKRVTARINACNLIPQIMQVPIPKTYEKETRENFYWGVIDEVLTKGFSGPVYSLAVEKYEHYIADGIVTHNCLYGWKQKGKHQWFSDRKQTTIWEYDRPKSSKDHPTMKPIPLMAYPIQNSSMRGTIVLDPFLGSGSTLMAADQTGRVCYGIELDEKFVDVIVKRYIESTGNHNVTVLRDGQTLTFDEAYSMMEESV
complement(1193539..1194000)       hypothetical protein; SSUD12_1178                                                    N/A                 StreptococcussuisD12MDESQRKQIWKMRAEGLGYGLIGKATGLSRDSVKKYCKRNPALLGHGAATKQMAKADQNDGLRCPQCYQTLKIHKIGRPKKFCSDKCRKVWWATHSDEHDKSKTAYEDLTCQQCGRSFLSYANPNRKFCSHSCYIQSRFYKGETNDKPTNNGN
complement(1194299..1194664)       PHAGE_Bacill_phi105_NC_048631: hypothetical protein; SSUD12_1179; phage(gi100051)     1.63e-31            StreptococcussuisD12MPRRPSIPCKQNGCPNLVSYGQKYCENHKANHQLDSKSTKAKGYNAQWNKARLRYLKVHPLCVQCKAKGRLTKATVVDHITPHRGDQELFWNQTNWQALCKSCHDRKTKTTDRYVEYSYRF
complement(1194666..1195703)       PHAGE_Faecal_FP_Brigit_NC_047909: hypothetical protein; SSUD12_1180; phage(gi100017)     4.12e-94            StreptococcussuisD12MIITSEQVSVGHPDKICDQISDAIVTECLKYDKSSRVAVETLIKDNHVVVAGENSTKHYFNLENIVRQVVEPLGLKNVRVTNLLGLQSSDIAQGVDNGGAGDQGMMFGYATDETPEYLPLPYVLATRVLEKLMSLGHPLLGKDAKAQVSYDYEKRRIDTFLVSIQHTETADLDKVKRIVMEAMMSVAHRYRQNLDFKVLVNPTGRFVLGGSFADAGVTGRKIVADTYGGFAHHGGGAFSGKDPSKVDRSAAYMARKIAKDIVREGYAKRCEVQLAYAIGVAEPVSVYVETFGTSRYTTQQLEGMIRERYDLTPGGIIKKLHLLDVDYTETTCFGHFTKDYLPWEK
complement(1195748..1195930)       PHAGE_Agroba_Atu_ph07_NC_042013: hypothetical protein; SSUD12_1181; phage(gi100594)     4.40e-08            StreptococcussuisD12MTKRQEEKLNALLTEIAKEELLVETLEKRWSDNLDFYDVSVWGIKRALERAYEAGRQSVK
complement(1196129..1196632)       hypothetical protein; SSUD12_1182                                                    N/A                 StreptococcussuisD12MDKVDYIAKNYQDMKMKLQLVQEKLLNYRPISEDSVIQSLVFEKSEQEMVKKSKNHGRSELISLNFREKQEQENQEYLSSLLNTYYCLKMDLYYFEFVMELLPEDLKPLANDLIYLGKSWTELEEIYEISHSTLAYRRRKILKQLRKCYRWTSKSLELKVEDYHIPI
complement(1196625..1198001)       PHAGE_Coryne_Stiles_NC_048789: putative single-stranded DNA binding protein; SSUD12_1183; phage(gi100050)     3.64e-161           StreptococcussuisD12MKLTLHNYQVVAKDFIISHPNAAVILDMGMGKTATTLSAVNELMFDRFEVAKVLVIAPLRVANTVWSDEIEQWAELRHLRYSKIVGTPKQRKVALQKDADIYIVNRENLPWLVEQCSPYFKWDMVVIDELSSFKSWQSKRFKAFMAMRPYMKRIVGLTGTPSSNGLMDLFAEFKVIDGGERLGRFIGEFRSRYFEEGRRNGNIVYEYIPMDYAECQIQDKISDITISMKALDYLDMPDLISTKKLVRMSEKEKEKYSQFKKEYVLSELDGLEVTAANAASLTNKLVQLSNGAVYSDDHTVVPLHEQKLDALEDILESANGETVLVAYWFKHDLARIIGRLEKLKVKSRVLKTEEDIREWNKGNVPVGLLHPAGAGHGLNLQKGGHHLVWFGLTWSLELYQQTNARLWRQGQEAETVVIQHIVTEGTIDEEILKALENKDAQQERLIAAVKAQVGGADG
complement(1197982..1198263)       PHAGE_Coryne_Lederberg_NC_048790: DNA helicase; SSUD12_1184; phage(gi100044)         7.20e-22            StreptococcussuisD12MREKIVEQKLVSEVKKRGGVCPKWVSPSFSGVPDRLVFLPKGKFGLVEVKAPGGKPRKLQEARHRLFERLGFKVYVLDHIEMIGDVLDEIDIT
complement(1198610..1200892)       PHAGE_Lactob_T25_NC_048625: hypothetical protein; SSUD12_1185; phage(gi100020)       3.33e-51            StreptococcussuisD12MQFTLSYSGQTGVQTTTVYPNQVTITDEISLQTVAQFDHVAGQFLNNTRSNTNFVKSDVLVMDIDNDHTENPDEWITIERLKEIFADYNFALVTSRSHMQAKAGKAPRPKFHIYFQINEVTDKDVYVAMKEELCNQYKFFDDHAKDAARFFFGNPNAQVIWHDSWLTIDEDLFQAVSIDDEEDFDADFYTPPSGPIQQGSRNSTMSVFAAKIVKRLGVTQEARDGFDEQAQKCVPPLDKAELDSIWGSAVRFYNRTIKQSQDYVSPEAYNREAMRPDDYTDIGEAGLLAREYGDRIAFTRETDYLAFNGKHWVEDEQLAMRQVHVFLDEQLAVADANLEDKTKRLIKTGISEELIFKGVKAIEKALDGPSQSLAFKEYKKAFDFHKFVMKYRDYRHLSAIVKTAKHMVRMSVSEFDNNEMLLNTPKATINLSQGLAGVKDHDSTDYITKMATASPSDKGKGLWLETLATFFCGNQELIDYVQMVVGMAAIGKVYQEHLIIAYGSGANGKSTFWNTIARVLGNYSGKLSADALTMSVRRNVSPEMAELKGKRLIIASEMSEGMRLNTSMVKQLCSTDEILAEKKYKAPFHFVPSHTLVLYTNHLPKVGANDDGIWRRLIVIPFNAKITGRSDIKNFADYLYEEASEAIMSWIIEGAEKAINANFKLTLPKVVAQSVSAYREANDWMGQFLGDCCEIGDQLTEKSGELYSAYRAYCAGINEYTRSTTDFYTALANAGFTKKRTNKGVMVKGLQLKLDDDFLD
1201181..1201315                   putative phage protein; SSUD12_1186                                                  N/A                 StreptococcussuisD12MVNEPYIKPDEDVADTLIAISVISKLLARKIMEEENNEQNERTE
1201290..1201613                   PHAGE_Coryne_Stiles_NC_048789: hypothetical protein; SSUD12_1187; phage(gi100042)     5.93e-05            StreptococcussuisD12MSKMKELNRLIRDMEETAKYYIRLVDEFKKLLSTDDETVPEPVSPKSEPRREIQLEDVRAVLATKAKDGFKNEVRALLNAYGASSLSALDPKHFAAVLEEAGGIGND
1201606..1202727                   PHAGE_Clostr_phiCT453A_NC_028991: hypothetical protein; SSUD12_1188; phage(gi100016)     2.28e-115           StreptococcussuisD12MTNHAILSASASHRWLNCPPSVRLTEDLPDVTSEFALEGTDAHELCAYLVDKALGRNARDPTEDLTFYNDEMQDCAEEYRNYVMGQVEKAKGYSRDPTVLVEQRLDFSKWVPEGFGTGDCLIVADGLLQVIDYKHGLGVLVDADHNPQMMCYALGALEMFDGLYDFEKVTMTIFQPRKHNISTFEIEKTELLEWAENELAPKAELAFKGEGDMQSGKHCQFCKLKNVCRKRAEDNLVLAKMEFADPDTLDNEDIAEILPKLDLLISWANDIKAYALNQATDGYPIPGYKLVEGRSVRKYSDETAVSQAVMEAGFDPYEKKLLTITAMTKLLGKKTFNDLLGGLVIKPSGKPTLVPIDDSRQEMNLAKNEFKED
1202732..1203280                   PHAGE_Clostr_phiCT453A_NC_028991: hypothetical protein; SSUD12_1189; phage(gi100017)     5.14e-69            StreptococcussuisD12MTTKVITGPNTRFSYLNANEPKSINGSTPKYSASLIIPKEDTVTINKIKAAIEQAYKEGESKLKGNGKSVPALSTLKTPLRDGDLERPDDEAYKNAYFVNANSPHKPGVVDGNRQEIIDTSELYSGIYGRASITFYAFNSNGNKGIACGLNNLQKLRDGEPLGGRTRAEDDFATEEDDDFLN
1203771..1203782                   attR                                                                                 N/A                 GGCTCAAGAAAT

#### region 2 ####
1209807..1209818                   attL                                                                                 N/A                 CATTACCTTTGT
complement(1210915..1211982)       PHAGE_Escher_vB_EcoM_12474III_NC_049457: hypothetical protein; SSUD12_1197; phage(gi100006)     1.62e-31            StreptococcussuisD12MTKTIIDLFSGVGGLSLGFEQAGFSTIVANEFDKSIAYSYSKNHPFTKMIVGDITSLELEKEFLQYKNKVDVVVGGPPCQGYSQKGSRKTIHDERNFLFKYFVKVVELVSPNYFVMENVPNLLTAEKGFFKQELITLFEELGYSLSMEIVDASKFGVPQRRRRAIILGKKGKKSVTFRLEEKKSVTIWDAISDLAFLESGDGEEEQNYLFPAQSNYQQELRSDSKILYNHKATNHSKIALERLKMIPENSGKDSLPEEHLTKSIYSGTWERMRKNEQSVTITTRFDTPSSGKFTHPFLNRAITVREAARLQSFPDSFIFFGPKTSQMKQVGNAVPPKLAKVIAEMILKDMEVSNG
complement(1211975..1212703)       PHAGE_Staphy_vB_SauM_Remus_NC_022090: adenine-specific methyltransferase; SSUD12_1198; phage(gi530787498)     1.82e-46            StreptococcussuisD12MVRIELINDDCSNAMKNINSGSVDLILTDPPYNLGVFMKNRDTNLHKMRDNFFGAAGWDDMEYDDWIESMDSFFNESSRIMKKGGSMIMFMSLIKIETIIQLATKHGFYYKTTGIWHKTNPMPRNMNLHFVNSTEAWLYFTYRTRTGTFNNEGKLFHDFIETSLVTKNEKIFGKHPTQKPIQLISHFVELLSNSGDLIVDPFMGSGTTGVVAKSLGRNFIGIELSEEYFDISSKRIEELDND
complement(1212705..1212905)       PHAGE_Bacter_Lily_NC_028841: Xre-like protein; SSUD12_1199; phage(gi971748289)       1.34e-06            StreptococcussuisD12MNISYNPLWEKLKEKNITRTELRESVKLGSSTYSNLVKNQTVTTDTLLKISNFLCCDVSELIESGK
1213042..1213731                   PHAGE_Strept_phiARI0131_1_NC_031901: hypothetical protein; SSUD12_1200; phage(gi100004)     1.73e-22            StreptococcussuisD12MFSKERLKHRRNEKMLSQSEIASMIGINRTAFHNWENGKSIPNQKNLTALSKILDVPVTYFESEYNIVNNYLQLSPDNQLKAEGYVEELLLSQQTPNVTPLFSVQVLADVQLSAGLGEGFFDEFETETVYSNEEQYGYDIAAWIEGDSMEPVYKSGEVALIRSNGFDYDGAVYALSWNDSVYIKKLYRDEDGFRMVSLNKDYPEKFIPYEDEPRIVGLVVGHFMPVEGV
1213734..1213961                   hypothetical protein; SSUD12_1201                                                    N/A                 StreptococcussuisD12MKLKDILELGTYGFNPDCKVEIFNMDNFEERLENEGFDEILIPQNDDAKIFPYAFLIEDSILIAMTEEDDNTNER
1213951..1214079                   hypothetical protein; SSUD12_1202                                                    N/A                 StreptococcussuisD12MNVKKMIYIKDERIIFTPDKFEYDITDYIGELIEELEKLKRR
1214084..1215499                   PHAGE_Bacill_SPbeta_NC_001884: IMPB/MUCB/SAMB family protein; SSUD12_1203; phage(gi9630142)     8.09e-80            StreptococcussuisD12MGYIDYSIEPQSDIAFLDMKSFYASVECVDRGLHPLYTSLCVMSRADNSAGLILASSPMFKKVFGKANVGRSYDLPFDINTRKFSYQNAWKQGLEVTPKYKSFIEHWAKRTLIVPPRMDRYIEKNLEIQHIFQDYAAPDDILPYSIDEGFIDLTSSLSYFISDKSMSRKDKLDNVSAMIQRDIYRKTGIISTVGMSNSNPLLAKLALDNEAKKTATMRANWSYQDIETKVWSIPKLTDFWGIGSKTEIHLQKLGIHSIKELANFNPDILKKEFGKVGVQLWFHANGVDESNVHEPYKPKSRGLGNSQVLPRDYRTQREIEIVLAEMADQVANRLRSAHKKATVVSIHIGYSRTEMKKSINAQKKIDPANLPKTMVGHVLELFRKKYTSGAVRQIGVSYSGFVDENYTLLSLFDDVEQIEKENRLQTAIDVVREQFGFLAIQKGTVLTEGSRNIERSKLIGGHSAGGLEGLK
1215496..1215864                   PHAGE_Lactoc_PLgT_1_NC_031016: hypothetical protein; SSUD12_1204; phage(gi100003)     3.14e-05            StreptococcussuisD12MIDRSYLPFQSAREYQDTKMQKWMGFFLSEHTSALADDANRVTYMSDLSLEKKLLLLSQVYAGQLHTRIYVVEKNMRVSYTGTIPNLTKDFILIKTTTGHINLKLKDIISIELEEEVPYESA
1215851..1216150                   hypothetical protein; SSUD12_1205                                                    N/A                 StreptococcussuisD12MNQLEFQRNHLQMDYYSESYQDFERDFYRYSNMNIPLTFLTDDILKTMATSRKNYFVLNKEKARDNRDHFFIFEVSTIDENPLIYRYSYKKTTTYLAQK
complement(1216237..1217196)       tagatose 1,6-diphosphate aldolase; SSUD12_1206                                       N/A                 StreptococcussuisD12MVKNLSKLMTKNGIISALAFDQRGALKKMMAKHQAEEPTVEQMEELKTLVSEELTQFSSSILLDPEFGLPASRTRDEQCGLLLAYEKTGYDTSSTSRLPDCLVEWSVKRLKEEGADAIKFLLYYDVDGDPYVNLQKHAYIERLGSECQAEGLPFFLEILSYDETIEDNASVEFAKVKPRKVNEAMKVFSDERFRVDVLKVEVPVNMNFVEGFGTGEVVYTKEEAAEYFRQQEASTHLPYIYLSAGVSAKLFQDTLVFAHEAGAKFNGVLCGRATWAGVVPVYIEKGEEAAREWLRTVGRKNIESLDRVLSLTASSCEEG
complement(1217262..1217705)       putative PTS system, fructose-specific IIA component; SSUD12_1207                    N/A                 StreptococcussuisD12MIDKKLVLVDVSASSKESVFDCLSQLVFEHGYATDIALVKEALLAREDEGTTGMMDGFAIPHAKSSAITKPGVAVLKLANGVEWQSMDGQPITSVIALFIPETEAGTTHLKFLSKIARLLMKTEFKTSFTNANSVEEIVELLEKHLV
complement(1217717..1219105)       fructose-specific phosphotransferase system (PTS), IIABC component; SSUD12_1208      N/A                 StreptococcussuisD12MATYKLIAATGCPTGIAHTFMAQEALEQAAKERNVSIKVETHGQIGIENELTAEEIAAADAVIIAADKDVNAERFAGKRVIETSVGEGIKNASKLIDDALSGKGIVKAGEAIKQETSSAGNESFGRQIYKHLMNGVSHMLPFVVAGGVLIAISFLFGIFSFDPNSEQYNPFAAMLKNDIGGVAMGMMVPVLSAYIAESIAKRPGFVSGLVAGLMAANGGSGFLGGIVGGFAAGYIVLALMKLFKGLPKSLDGLKAIFLYPLFGVFVTGLFMVAVNSPMTWVNESMMAWLAGFENANPIILGIIIGCMSAFDMGGPVNKAAYVTGTALLAQGNTSFMAGVSAACIVPPLTTFVATTVFRKYYSDEDCNAGLANLILGSTHITEGAIPFAAKDPLRNLPTLMLGSSIGAVLTYLWGVKVPAPHGGFLVLPVVTNAGLWVLAIAIGAIISGLLLGYIQKTKIEKV
complement(1219106..1220041)       1-phosphofructokinase; SSUD12_1209                                                   N/A                 StreptococcussuisD12MGIYTLTMNPAIDMFIKTNQLKNNIVNRTLYDELQPNGKGVNVSLILKMLDIPNTAFGFSAGFTGQFIKDELVAKGITEEFIDVEGITRINVFTQVLETSEEYKLVNKGPEISPSAQDALLEKIRLLGLNDYLVISGSLPRGIDSSYLVKIAEITNENNVSLILDISDPVILTCLKYKPYLIKPNDEEIAQWFEVQDISEDDILEYGKSLQDLGARNVLISLGSKGAVMFTDSGEIFTCNAPKGEVVNTACAGDTTLGTFLGSKILGLSTEKSLIKAVAAGSSTAFRSGLTDFSDVDELSKQILLKKMEVK
1220325..1221074                   RpiR-like protein; SSUD12_1210                                                       N/A                 StreptococcussuisD12MAINKHLTETEKHTWTHLNNKFKEISTLSISEASELLNVSTATITRTLQKKGYTGFSDFKHDVRNRKQDSLSILKDKKITDEIKVSVLKSYQEVTKTLNELDLETLEMAISKLQSAKKITIFARGFSELLATEMQTKFLLLGYYSELHTDPNIIRTVSARLDANDCVVFVSLNGETIELQDAAKICQKNDTTTILLSANPSGSLSNYTQIKLFGFKTELTYFPDVEVHSRLPLYIIGRLLLDTLAANQK
complement(1221203..1221619)       hypothetical protein; SSUD12_1211                                                    N/A                 StreptococcussuisD12MRFKDFNLEVVNVERYSSDYSMTVNKNFVTFSKGIVQALEYPAHVLVAFNKDTKVMGIQVCRAKTRGAFSFSKPVGEQKGIVQVGHKNLKETLLTIMSEWKSDKRYRVEGIHIPEDKAFIFELKDFEELSDFRKNDNK
1221452..1221463                   attR                                                                                 N/A                 CATTACCTTTGT
complement(1221634..1222746)       PHAGE_Paenib_Leyra_NC_048692: portal protein; SSUD12_1212; phage(gi100069)           1.82e-21            StreptococcussuisD12MVRRNSKITRQQKKIRDAFVSERTVEIIPAKREFTDVKTKKLRVAAYCRVSTFDESQSGSFELQKQTYTERINSNPDWIMAGIYADQGASGTSIKRREQFQQMLHDCRCGKIDLIIVKSVSRFARNQLDFISIYRELKALSPPVGIYIEDINLNTLDTNSEFILGIMAIVAQGESEQKSASITWSVIERFKRGIPMIPTHNLLGYTKDQYGRVVIDETEAKIVRLIYDSYIEGMTASEIASTLMTNHIPTVTGLERWTSLAVYNILRNEKYKGEIIMQKTYTVDCFSHKTRKNNGEKPKYRLKNGIPSIIPESRWDLVQELLKQPRRKSKSTSEIFVPKLYIKKLKAGKLRDFVVLDPSWKSEDIQEVFK

#### region 3 ####
1590138..1590149                   attL                                                                                 N/A                 TATAATGAAAAG
1593699..1593710                   attL                                                                                 N/A                 TCCAACCTCCCA
complement(1599102..1599569)       PHAGE_Erwini_PhiEaH1_NC_023610: hypothetical protein; SSUD12_1598; phage(gi589287686)     1.43e-09            StreptococcussuisD12MTIRKARQSDIPVLNELLQDILQVHYQARPDIFKSAGQKFSEAELVALLENPDKPIFVFELEGQVVGHLFCELSTATGDVFETVKTLFIDDLCVANSARGQKIGEQLYEFALSYAKEQGCHNLTLDVWADNAGAVRFYERQGMKPQKFRMEQIIN
complement(1599738..1600298)       PHAGE_Staphy_Pvl108_NC_008689: putative transposase; SSUD12_1599; phage(gi119443708)     2.56e-27            StreptococcussuisD12MQISNGVVYSFKNYSRRTDKYGFERDIKIYEADPVQASEELDQLARTEKGNLKQIQYNPTWNYFKNLVKEKLTSKEGARIYVKRKVDVEPVFGRMKGVFGVRRVHVRGQKVVETEIGFLLMSMNLTKLAKKIVQDNRGKKKNTDSSAEFHQKQLESICVFSYWLVFAQPRQIERNFSSFLHYTFSF
complement(1600572..1600889)       PHAGE_Lactoc_bIL312_NC_002671: excisionase; SSUD12_1600; phage(gi13095898)           3.66e-18            StreptococcussuisD12MAMSKAELVYRPAKQSEKTEAGDYAQLCQIWEGLTVTTAKVWAAEMREHPDFRQYVFNPTHKIVFIDYKGFGLFVKWKSRNRYRPKKETLAEMLKNIEVEKRFSA
complement(1600963..1601157)       PHAGE_Strept_PH15_NC_010945: hypothetical protein; SSUD12_1601; phage(gi190151425)     4.20e-21            StreptococcussuisD12MLWKNIERILAEKNFSVYRLALNAGLDPAMLYRLRDGKVKDLHFETVKKIAKALDVSLNELAKS
1601380..1601562                   prophage Lp2 protein 14; SSUD12_1602                                                 N/A                 StreptococcussuisD12MYFVIYKSKNDQYYFVIKGANREVVATSETYYYKSTAQRTIDSIKNSISPNSNVIDMTGD
1601694..1602128                   hypothetical protein; SSUD12_1603                                                    N/A                 StreptococcussuisD12MFVKNDWRKFVKKHRPLLANLMLFIITAIITCGMFHLMRLYTVDKYALSGLTSIDWLRLFIPLFAIWIPPFLVTYLILEVFNGTSVPKKLSTAIALYAGGIVFSIFLLRHLLLVLTIDQFNLLATIVGFPATFFFFKVLRKLFD
complement(1602357..1602491)       PHAGE_Strept_EJ_1_NC_005294: hypothetical protein; SSUD12_1604; phage(gi39653680)     9.56e-08            StreptococcussuisD12MVDILKSLADNDLAIPIIILGLVREARLWHKQVLEHKRNLQNKD
1602669..1603436                   PHAGE_Strept_phiARI0131_2_NC_031941: hypothetical protein; SSUD12_1605; phage(gi100035)     1.46e-63            StreptococcussuisD12MARGRGKATPHDLEAMQHVSGMLQRLLAENDLKQSHLADRLEIPRSSFNEYVKGTALPRPGNVQKIADYFGLKKSNIDPRFKSTIPSATPKTVSDDVLRLDRDLHSNNHKSWIRYGNELLDKQNTVNEPQAVYFTYNYYDQPASAGTGQYLNDVKVETIELPIEVDADFVVPIYGDSMEPEYHSGDYVFVKLSVDLSDGDIGVFAYNGDAYIKQLRITDQGAYLHSLNPDYDNIPITADTDFRTIGEVVEVYRER
1603440..1604339                   PHAGE_Methan_psiM100_NC_002628: hypothetical protein; SSUD12_1606; phage(gi11863094)     3.06e-11            StreptococcussuisD12MANYTIKIPVEIKSDYFPLLLLNVEFVTAMSKATKFDTITFDFSRTSWIDAEMTVVLSMMFELALQQTDGEVRAVIETMPDTVKTILKKNNFFPAYNLGEKLMDTFNTTITFFAGNPSDDNLIHEYIREEVFAAIGSKISDDFLKEVSYCIFEIVHNVRDHSGGDRFYICGQHYPKQGILRLAISDIGVGLPAKVKQRNPHMTSDIEAVEWAFVNGNTTKRRKEGGVGLHSIKDLLHQRGQLKLISNQAYYSISRTGTITTQTMPERFRGTLLWIEFDIHKCLKPRKNVKIENNDTFNF
1604355..1604714                   hypothetical protein; SSUD12_1607                                                    N/A                 StreptococcussuisD12MTILFVKDIIGDTLAVTADKGERVFKILKTNIENNEQTTLDFEGITDLISAFSNTALGQLYDVADADTLNRLIKVNPDTLHPSDRRTIDRSIKNSKNKREKDREFRKRLAEKMDSELNI
1604711..1605250                   conserved hypothetical protein; SSUD12_1608                                          N/A                 StreptococcussuisD12MSTEVYDLNRIPFGSNRNLLIDTNVLIYLQSGKTNNYDKMWELALRQGNSLFVTTLTISEFINRYVRTGYDVYCDEHNFDKSTFKFKRDYQKTQHFLDIYDEVIDTLESEILKKCNVIDFNKKDFEDISSLTQYMNDINDALYLKKAATEDFSIVTHDADFFDVDIPQQIRIYTYNKKY
1605377..1605502                   PHAGE_Strept_20617_NC_023503: phage integrase; SSUD12_1609; phage(gi588295081)       6.10e-12            StreptococcussuisD12MWDEQLPDGRYKFFERFQDPYTGTWKRVATILTSNSSRAQK
1605563..1606537                   PHAGE_Lactoc_bIL312_NC_002671: integrase; SSUD12_1610; phage(gi13095892)             5.09e-117           StreptococcussuisD12MLFTDLFDQWWNFYQQEIKRTSIASLKGNIKEIRESFGIGVKVVNIDPKYVQNYLDNLDCSRNKKERNKSMLNLAFDYAVDLDIIKENPSRRAKLPRIKKTLEDWKKIEEKYLEEDEIKPLLKELFRRPSTYRTALLAEFMSLNGCRIGEAVSLEPENRDFETKILQLHGTYDHTEGYRNGEKTTPKTNASYRETIMTTREMEIIQEMEIIQELEFMNELEKNTNPRYKDMGYIFTTKNGVPMQTNSFNLALKKANERLEKPIQKNLTSHIFRHTLVSRLAENNVPLKAIMDRVGHADAKTTIQIYTHVTKKMKSNVADIMEKY
complement(1606658..1606756)       hypothetical protein; SSUD12_1611                                                    N/A                 StreptococcussuisD12MKQKYFASKSQWSDSGRLEMKQKHFASKREKL
1606758..1606769                   attR                                                                                 N/A                 TCCAACCTCCCA
complement(1606864..1607139)       PHAGE_Bacill_0305phi8_36_NC_009760: DNA-binding HU protein; SSUD12_1612; phage(gi156564019)     4.32e-36            StreptococcussuisD12MANKQDLIAKVAEATSLTKKDSAAAVDAVFGAVADYLAAGEKVQLIGFGNFEVRERSARTGRNPQTGAEIKIAASKVPAFKAGKALKDAVK
complement(1607229..1607825)       conserved hypothetical protein; SSUD12_1613                                          N/A                 StreptococcussuisD12MRPRKAGNLNIWKWLFLAQLALLIGCGIVLYTRIQTDREDLTKLVQTSTEDTKVGTFSTNREQLNQTLTNYLKEYQTEEFSYQLFVTSQQVVFEGSYQIFGVTIPLYIYFQPSKMEDGSILLRITEISVGSLSLPKAEVLAYLQKNYKLPAFVKIDSEQAQVQVQLTELKNKFGLYGKANTIDLYNDQFIVDIYRKRQ
complement(1607797..1608630)       lipolytic protein G-D-S-L family; SSUD12_1614                                        N/A                 StreptococcussuisD12MNNRKLIQGFVFFFLAILGSIFLFHQLIPVASSRISRQELTVSEKISFRYVALGDSLTEGVGDTTGQGGFVPLLAQSLTNDYGYEVDYKNFGVSGNTSNQILKRMKEDGELISYLKTADLLTLTVGGNDLRKAIIKNIANLKVSTFDKPAKDYGKRLDTIIKTARKNNPNLPIYVVGIYNPLYLNFPELTEMQTIVDNWNTMTEQITEKYQHVYFVPINDLLYKGLEGEAGISQNGSQVTNNLLYEEDSFHPNNTGYEIMKKAILERMNETTESWEP
complement(1608623..1609456)       PHAGE_Staphy_SPbeta_like_NC_029119: DegV domain-containing protein; SSUD12_1615; phage(gi985761237)     5.61e-20            StreptococcussuisD12MSKIKIVTDSSTTIEPSLVEELNITVVPLSVMVDGVVYSDNDLKEGEFLELMRGSKNLPKTSQPPVGLFAETFADLAKDGSQIIAILLSHALSGTVEAARQGATLSGADVTILDSSFTDQAEKFQVVEAARMAQAGASKEEILAAIETVKEKTELYIGVSTLENLVKGGRIGRVQGMLSSLLNIRVIMEMKDHQLTPIVKGRGNKTFKKWLEEFTATLADKKVAEIGISYSGTADFANEMKSQLQEYVSKEISVLETGSIIQTHTGEDAWAILIRYE
complement(1609550..1611211)       PHAGE_Escher_500465_1_NC_049342: putative single-stranded DNA binding protein; SSUD12_1616; phage(gi100050)     2.70e-104           StreptococcussuisD12MLLEVSIKNFAIIEQVSLNFENGMTILSGETGAGKSIIIDAMNLMLGARATTDVIRHGAAKAEIEGLFSFENSRALEQILLEQGIEVADELIIRREILQNGRSVSRVNGQMVNLSVLKQIGQYLVDIHGQHDQEELMKSQHHIRLLDSFGEDGFWSLKDRYQTIFDAYRSLRKRVLEKQKNEQEHKARIEMLEYQIAEIEAADLKSGEDIQLNQERDKLLNHKQIADTLTNAYALLDNEDFSSLNNLRSAMSDLQSLEEFDPDYKQLSSSLTEAYYVVEDVTKRLSDVVDNLDFDGNRLIQLESRLDLLNTITKKYGGTVDDVLDYFSKISEEYNLLTGNDLSGDDLEVQLKNLEKELVERAGQLSQSRHELAVVLEDIIRQELQDLYMEKARFQVRFTKGKFNREGNETVEFYISTNPGEDFKPLVKVASGGELSRLMLAIKSAFARKEGKTSIVFDEVDTGVSGRVAQAIAQKIYKIGQYGQVLAISHLPQVIAIADYQFFIEKISDEHSTVSRVRLLTKEERIEEIAKMLAGDKITDAARNQAKELVEKG
complement(1611214..1611639)       arginine repressor, ArgR; SSUD12_1617                                                N/A                 StreptococcussuisD12MNKRERLEVIKDLVVRFPIDTQEEIVERLEAMGVNATQATVSRDIKELGIIKVPSADKGYIYGLPKAGLVKVKSQNVFEVSVMDKMINLRLVPGSSAVVKRQILEQFQEHVFSVIADDDSILLIVTNEGIISQIEQTVRGW
complement(1611632..1612453)       hemolysin A; SSUD12_1618                                                             N/A                 StreptococcussuisD12MAKERVDVLAFKQGLFETREQAKRGVMAGLVISVINGERYDKPGEKIDEGIELKLKGEKLKYVSRGGLKLEKALQVFQLSVEGQTTIDIGASTGGFTDVMLQAGAKQVYAVDVGTNQLAWKLRQDERVISMEQYNFRYAELGDFELGQPSFASIDVSFISLSLILPALHRILAEGGQVVALVKPQFEAGREQIGKNGIVKDKSVHLKVLEEVTKMAVETGFSVKALSFSPVQGGHGNIEFLAHLEKSTQPNQIDKEVITTTVYQAHEEFKKDE
complement(1612446..1613315)       geranylgeranyl pyrophosphate synthase; SSUD12_1619                                   N/A                 StreptococcussuisD12MVASKLQRLEEAMADFYQPQVAERLNQSVLYSLQAGGKRIRPLLLLTILESFGMELKQAHYQVAACVELIHTGSLIHDDLPAMDNDDYRRGRLTNHKVYDEATAILAGDSLFLDPFGFLAQVDLPAETILALVRELSQASGTFGMVAGQVLDMAGEGQNLTLEQLQAIHANKTGKLLTFPFVAAGLIAGQSDVVISHLRQAGQLIGLAFQVRDDILDVTATFEEIGKTPQKDVLAEKSTYPALMGLEASKVFLEDSLNQAINELDQVAKQVPFSTEKIKEIIESLRING
complement(1613315..1613530)       exodeoxyribonuclease VII small subunit; SSUD12_1620                                  N/A                 StreptococcussuisD12MSKQTKTFEENLAELEGIVTKLERGDVALEEALAEFQKGMVLSKDLQKTLAEAEKTLVKVMQADGSEAEMD
complement(1613505..1614848)       PHAGE_Gordon_Bachita_NC_030936: tail length tape-measure protein; SSUD12_1621; phage(gi100057)     2.11e-38            StreptococcussuisD12MVEYLSVSHLTKYLKLKFDRDPYLEKVYLTGQVSNFRKRPSHQYFSLKDDKAVIQATMWAGVYKNLGFELEEGMKINVIGRIQLYEPNGSYSIVIEKAEPDGIGALAIKFEQLKQALTQEGLFKEEFKQVLPRFTKKIGVITSPSGAVIQDIITTVSRRFSGVEIVLYPTKVQGDGAAQEVVANIQRANERDDLDVLIVGRGGGSIEDLWAFNEEIVVRAIFESRIPIISSVGHETDTTLADFVADKRAATPTAAAELATPVTKADLLGYLNQQENRAYQAMTNRLRFLRGQLEKISQSVMFRQPERLYDGYLQKLDRLTNQLQTRMKELYSQQKQAGLLLQQRLQGVHPGRKVESFQERIIQQERLLKSNMANIYDNKMAKADKLIEALTMLDTSRIVARGYAMIRQDGRVIDSVENVQMGENLTIQMKDGQLDVEVKHVQTDENI
1615015..1615923                   PHAGE_Rhodoc_Weasels2_NC_041887: hypothetical protein; SSUD12_1622; phage(gi100065)     8.18e-44            StreptococcussuisD12MKIDDLRKSSNIEDRRGQSSSNSSFSSGSSGGNVLLGLLFSRLGWKGKLLVLVLLLAFGGMSNLGGLLSPSTGTNPYQSSQVTTTGTDVSDADAEFMSKVLGSTEDFWVQEFKANGLTYNAPTMVFYTNQTQTGCGVGSAQAGPFYCSADRKIYIDTSFYQELSSKYKATGDFAMAYVIAHEVGHHVQNELEVLGAYHQKRAQLSDKEGNALNVRLELQADYYAGAWAKYVDGQGILDAGDIDEAMNAAHAVGDDTLQQEAYGRNVPDSFTHGTSEQRKKWFNLGYTYGDLAHADTFSVENP
complement(1616132..1616683)       hypothetical protein; SSUD12_1623                                                    N/A                 StreptococcussuisD12MIIFLVICIFLVRIYFLKISIKNEKRILKDGGSEFGVQNTKLLTIVHILFYLSCLVEAVVRHTKFDTLSSLGLIFLLFSMGMLFWVTRLLGDIWTVKLMLVKDHRFVDHWLFRVVKHPNYFLNIIPELIGLALLCHATYSFLILFPVYMVILYRRIHEENNLLKTVIIPNGTVQSAAEITGNN
complement(1616869..1617708)       PROPHAGE_Ralsto_GMI1000: isrso11-transposase orfb protein; SSUD12_1624; phage(gi17546155)     1.48e-84            StreptococcussuisD12MVAEGFRLDLLLTIAQLVPSTYHYQVKQLDKPDKDKDLKAEIQAIYDEHKGNYGYRRIHLELRNRGFSVNHKKVQGLMKELGLTARIRRRKRYKSYKGDVGKKAPNLIERAFEGAKPFEKCYTDVTEFALPNCAEKLYLSPVLDGYNSEIIDFTLSRSPNLIQVKTMLEKVFPEETYPNTILHSDQGWQYQHEVYHRFLVSKGIRPSMSRKGTSTDNGMMESFFGVLKTEMFYGFEKNFKSLDQLEQAITEYIFYYNNKRIKTKLKGLSPVQYRTKSFQ
1621673..1621684                   attR                                                                                 N/A                 TATAATGAAAAG

#### region 4 ####
complement(2148576..2149859)       PHAGE_Bacill_G_NC_023719: gp2; SSUD12_2137; phage(gi593777470)                       3.72e-17            StreptococcussuisD12MKLVEKKYPYMKESVFYGKVDNGLTVVLLPKVDFHETYGILTTNFGGIHTRFTLANGNSVVYPAGIAHFLEHKLFETENEEDIMNEFAKLGASANAYTSFRQTSYLFSTTQKVLESLSLLQSFVREPYFTEDNVEREQGIIEQEIEMYQDDADYRLFTGILSSLYPESPLAYDIAGTVESIAAITADDLHENFDVFYHPSNMNLFVIGNFDLEAVWKQISSYQVAQMDNPAQSFELAGVQKLPIQEHLSEQFEVSTPKLAVGLRGNDEVDKETIQKYRLSLQFLFAMLFGWTSKRYQQLYEQGKIDSSFQFQLEVTPEYHYLIISGDTQEPITLSSILMKALRKFEDDADVTEDHLQLLKNEMYGDFIRSLNSLEFTASHFVSQYSEYENVFDIPQMIQELQLDDIREAGRRFIDHCDMTDFTIFPK
complement(2149856..2151109)       Zn-dependent peptidase; SSUD12_2138                                                  N/A                 StreptococcussuisD12MKLQEGVDLHFIDTDQFTTNRIRIRFAAEMSEATVAGRVLVANIFEMGNQEFQTAQAVRRRLAELYGAQFSTSVSKRGRVHCVDVTISYVSPRHLPENEDITVEILDFLYTCIFRPLKKGRGFDSQIFEVEKTNLINFLQSEIEDNFYHADVEMSKLFYKDPSLQIPRVGRLDLVEKETAESTFQIYRNMLRMDKIDIFVLGKVDREQVKRKLEDFGFTYRNPKLELEYHQEYSNITQEKIERKQARQSILELAYHLQVVYNDVNYPALMVFNGLLGAFSHSKLFMNVREKESLAYTIGSQVSIFSGMLKVYAGISRENRLRVMKLISKQLLDLKCGKFTEEELELTKNMLIHSATLAQDRQNNLIEQVYNQVTLGNRNLSWLDWIEAIKSVSIDDVIRVGQMINLQAVYFMEGTEE
2149941..2149953                   attL                                                                                 N/A                 TTGATAGCCTCAA
complement(2151616..2151996)       PHAGE_Strept_315.2_NC_004585: hypothetical protein; SSUD12_2139; phage(gi28876234)     1.49e-10            StreptococcussuisD12MSKQLAKRKLKEFHRWCRVAVLHYDMIQVDENWIVKLFEFDPEDYKGRIYDWQRKAPEEVNEIIKAVNAIARPRHRAILIMSYISPDKIRTAEQIQRLGIAESTYYLAKNEALKEFACQYRDGSLL
complement(2152338..2152973)       PHAGE_Strept_EJ_1_NC_005294: DnaC protein; SSUD12_2140; phage(gi39653686)            1.27e-27            StreptococcussuisD12MENHLDKITVLDELCEKHGTPLWQFPYTSQGQEHISKMCQVCTQEQIAMTGQEILEEARNRQRYVTTYDVLMRDSTVPEELRGATFENFKAETAEEKQLLEFARGQVKKYTQGMTGNTLITGQTGIGKSHLSFAMAKTINEHYKDIGKPKSVLFVSLTEIIKQIKNGWNYGKGASLTEFDAVKQLTSVDFLILDDLGAKNHYITRRCVAWI
complement(2152986..2153792)       PHAGE_Strept_phi3396_NC_009018: putative replication protein; SSUD12_2141; phage(gi126011075)     1.23e-74            StreptococcussuisD12MTKTKIYFWLKIDKKFFDNIFIKRLKTIPGGYTMTVIYIRLMLESLDSDCILYYEGYFENLKEELALKLDVSEDDIDMTMAYFTKCGLIQIDEDKNAELPQAKAMIMSETNWASYKREQRQNKEKLDNVQKSWTNSNSCPTEIELELEKEIELQLEQQQEEKNGAVGVGKNAIFEKLKEAFGEMSVNGTMITEVEDLLKTHGQTLLLYALNETILNGGRSIRYTRKILANWQGQGLKTVEQIKQSQADFEVMKQPKQDNLDNFMELPF
complement(2153779..2154063)       PHAGE_Lactoc_bIL310_NC_002669: hypothetical protein; SSUD12_2142; phage(gi13095880)     1.36e-06            StreptococcussuisD12MRLELTAQSETDLKTGILELIGNYLEAREMVKPRVTGLITAQQLKSELDIEYKTLQRWEKNGLRRYQPPIEDTKKIFYRVSDILIFLGVENDKN
complement(2154053..2154391)       PHAGE_Strept_T12_NC_028700: hypothetical protein; SSUD12_2143; phage(gi966201497)     3.61e-12            StreptococcussuisD12MTENRLPPHLYKVFKLLPLGMELPITGTDIERLTGLDIRTIREHIRQLIVDYGIPVCGGRDNKLGGYYIPQNETERLAGVLPLQRQYDQEHKRIHALLTADLQDWRKYRDEA
complement(2154388..2154537)       hypothetical protein; SSUD12_2144                                                    N/A                 StreptococcussuisD12MLTFRELEHIAETILKHTTPEEMQCYLDMEHDSKLLWIKYKIASLEVQV
complement(2154549..2154752)       hypothetical protein; SSUD12_2145                                                    N/A                 StreptococcussuisD12MQEMTIETALTLIAIFTPLNLYLWFGVGLGTFRLDIEPKIKTEGKYTRPLKNERYGAYIQLAGKRYN
complement(2154756..2155058)       hypothetical protein; SSUD12_2146                                                    N/A                 StreptococcussuisD12MKDNNRETIIHFEMSNQEYAPVKNAISEELEAVIRKVYQLDHETGWTLHYLTEIMLNHFHEDVARVQYGDLTPIECSLNSIASRVEKARIELLKAGQEGG
complement(2155522..2156151)       PHAGE_Lactoc_bIL311_NC_002670: Orf3; SSUD12_2147; phage(gi13095661)                  4.14e-34            StreptococcussuisD12MELVYMDGRKEPYTTSEIIAECAGVQHHTVTRLLRNHKERFEAFGFYGFEIHKLDGKGRPKKVYHLNEQQATLLITYLDNTPQVVKFKTNLVRAFFEMRDEVAEFRYQRALEKPKRKALHEAIETWQEAPKHAHSTVTNLLLKGTTGMNKRQLMAHRGGHNGIDSLTSQELIRYQALEDMAIAMINLGMTYQDIKNMVFRPLKNAPQGA
complement(2156163..2156369)       PHAGE_Lactoc_bIL311_NC_002670: repressor; SSUD12_2148; phage(gi13095660)             5.46e-11            StreptococcussuisD12MELGERIKVIRVSLGETMEQFGQRFNTSKGTVNNWEKGRNAPNKANLKKIADLSDNPMEFIALYLTRV
complement(2156387..2156587)       PHAGE_Lactoc_bIL311_NC_002670: ps3 protein 14-like transcriptional regulator; SSUD12_2149; phage(gi19343481)     2.29e-14            StreptococcussuisD12MSKLKGYRVMLGLTQQAMADKLDISLQSYNNKETGKTPFNDKEKKAIKTIVAEVEPDITIDELFYS
2156791..2157297                   PHAGE_Strept_315.2_NC_004585: hypothetical protein; SSUD12_2150; phage(gi28876248)     1.18e-15            StreptococcussuisD12MNRLKELRQEKKLSQKELADYLGINEKTISRWENGESTIKSDKAQALADYFEVEVGYLLGYNEGHRRMYELFGKHPKKGAMGIIDFDELLEAHELGYIKDGKILDELQTDASVAIKFLESIQSKLLLFGDISKTHTKKLEDITFFLVDFYETVERRQKTLEQTSNTKD
2157751..2158581                   PHAGE_Staphy_EW_NC_007056: ORF014; SSUD12_2151; phage(gi66395821)                    2.94e-115           StreptococcussuisD12MVKINANGKEITLLSTNTDYVSLTDIAKYRNPDAPADIIKNWMRSRNTIEFLGAWEKINNENFKLVEFDQFRSEAGLNGFVLSPQKWIKETNAIGITSQSGRYGGTFAHSDIAFEFASWLSPEFKLYIIQDYQRLKQEEAYKNQLDWQVNRYISKLNYTIQTDAIKENIVPTLQPYQISFAYSSEADLINVALFGMTAKEFKNAYPDREGNQRDNATIEQLLVLNNLQSLNAEMIKQGLSQSNRLTELNRIAKEQLDVLYKNNQKALDSLKRLSDK
2158550..2158562                   attR                                                                                 N/A                 TTGATAGCCTCAA
2158747..2159919                   PHAGE_Lactoc_bIL311_NC_002670: integrase; SSUD12_2152; phage(gi13095659)             1.32e-66            StreptococcussuisD12MIMKITVVKKKNGATVYRASVYLGIDAITGKKVKTNVTGRTKKEVKNKTQQAIATFKTDGATRYQSATITSYKELAELWWNSYKHTVKPNTRGNIRGLLKNHVIPLFGAYKLDKLTTPLLQSIVIKLADKANTGEAGAYLHYDKIHALNKRILQYGVVMQVLPYNPAREVILPRNAKKATRKKVKHFNDEQLKQFLGYLDGLDLTNYRNIYEVTLYKFLLATGCRINEVLALHWSDIDLNNATVSITKTLNRYGSINSPKSNASIRDINIDSQTVAMMKEYRRRQIQEAWTLGRSETIVFSDFIHDYPEDKTLGNRLTTRLRNIGLPNIGFHGFRHTHASLLLNSGIPYKELQHRLGHSRISMTMDIYSHLSKENAKNAVAFYEKALGNL
2160057..2160440                   hypothetical protein; SSUD12_2153                                                    N/A                 StreptococcussuisD12MEFKLFDDYITLQALLKTTGILHSGGAIKGFLEENTILFNGEDEKRRGKKIRVGDVITLPDHNTSITIVAPSAEEIKQHQEDQAEKERVAAIVKKLNQENKKNKKQVKTPKKATKKTERKPVRFPGM
2160443..2161537                   DNA replication and repair protein RecF; SSUD12_2154                                 N/A                 StreptococcussuisD12MWLERLELQHFRNYNQLDIEFHKGLNVFLGENAQGKTNILESIYALALTRSHRTRTDKDLLQFQEKELSISGLLHRTSGKVPLDIHLTDKGRVTKVNHLKQAKLSNYIGHMNVVLFAPEDLQLIKGAPALRRKFIDVELGQIKPLYLSDLSNYNHVLKQRNTYLKSTDKIDENFLSVLDQQLAEYGSHVIQHRIDFLKKLEEFGNRKVQDISDKREELTIEYQSSIKFTTSVNLIDIFLTELERCRKRDLFKKNTGVGPHRDDVAFFINGMNAHYGSQGQHRSLVLSLKLAEIELMKEVTREYPILLLDDVMSELDNNRQIKLLETITDTIQTFITTTSLDHLHKLPDSLKIFHIESGKVTESE
complement(2161608..2163089)       PHAGE_Staphy_42E_NC_007052: ORF012; SSUD12_2155; phage(gi66395520)                   1.75e-38            StreptococcussuisD12MSNWDTKFLKKGFTFDDVLLIPAESHVLPHDIDLKTQLAPNLTLNLPIISAAMDTVTDSKMAIAMARAGGLGVIHKNMSIAEQADEVRKVKRSENGVIIDPFFLTPEHTIAEAEKLMATYRISGVPIVETLENRKLVGIITNRDMRFISDYSQPISTNMTSDELVTAPVGTDLATAEAILHKHRIEKLPLVDENGCLSGLITIKDIEKVIEFPNAAKDEFGRLLVAGAVGVTSDTFERAEALFEAGADAIVIDTAHGHSAGVLRKIKEIRDHFPTRTLIAGNIATAEGARALYEAGVDVVKVGIGPGSICTTRVIAGVGVPQVTAIYDAAGVAREYGKTIIADGGIKYSGDIVKALAAGGHAVMLGSMFAGTDEAPGETEIFQGRKFKTYRGMGSIAAMKQGSKDRYFQASVNEANKLVPEGIEGRVAYKGSVADMIFQMVGGLRSGMGYVGAGNLTELHENAQFIEMSGAGLKESHPHDVQITNEAPNYSVQ
